NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome Family F048378

Metagenome Family F048378

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F048378
Family Type Metagenome
Number of Sequences 148
Average Sequence Length 84 residues
Representative Sequence LNQYVEQPGQPTKGLLHSAALTSVERLHLDAERQRLVVEIDLTDPEFFKQAFARSTNEYAPSALKIEPFKCSPEGVTGTIRK
Number of Associated Samples 123
Number of Associated Scaffolds 148

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 0.68 %
% of genes near scaffold ends (potentially truncated) 97.30 %
% of genes from short scaffolds (< 2000 bps) 93.92 %
Associated GOLD sequencing projects 112
AlphaFold2 3D model prediction Yes
3D model pTM-score0.52

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (95.270 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere
(12.162 % of family members)
Environment Ontology (ENVO) Unclassified
(38.514 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(57.432 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 0.00%    β-sheet: 20.91%    Coil/Unstructured: 79.09%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.52
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 148 Family Scaffolds
PF13637Ank_4 4.73
PF04675DNA_ligase_A_N 4.73
PF02772S-AdoMet_synt_M 2.70
PF12680SnoaL_2 2.70
PF12796Ank_2 2.70
PF11730DUF3297 2.03
PF13606Ank_3 2.03
PF00069Pkinase 2.03
PF01039Carboxyl_trans 2.03
PF02774Semialdhyde_dhC 2.03
PF00561Abhydrolase_1 2.03
PF07859Abhydrolase_3 1.35
PF01636APH 1.35
PF13620CarboxypepD_reg 1.35
PF03544TonB_C 1.35
PF07995GSDH 1.35
PF03965Penicillinase_R 1.35
PF03972MmgE_PrpD 1.35
PF07152YaeQ 0.68
PF00795CN_hydrolase 0.68
PF07635PSCyt1 0.68
PF00023Ank 0.68
PF05239PRC 0.68
PF11578DUF3237 0.68
PF13570PQQ_3 0.68
PF00135COesterase 0.68
PF01435Peptidase_M48 0.68
PF06078DUF937 0.68
PF01323DSBA 0.68
PF07969Amidohydro_3 0.68
PF00144Beta-lactamase 0.68
PF12543DUF3738 0.68
PF03713DUF305 0.68
PF02321OEP 0.68
PF13751DDE_Tnp_1_6 0.68
PF13703Obsolete Pfam Family 0.68
PF03929PepSY_TM 0.68
PF12704MacB_PCD 0.68
PF05569Peptidase_M56 0.68
PF12697Abhydrolase_6 0.68
PF02639DUF188 0.68
PF00575S1 0.68
PF02773S-AdoMet_synt_C 0.68
PF07366SnoaL 0.68
PF05685Uma2 0.68
PF00438S-AdoMet_synt_N 0.68
PF07519Tannase 0.68

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 148 Family Scaffolds
COG0515Serine/threonine protein kinaseSignal transduction mechanisms [T] 8.11
COG1793ATP-dependent DNA ligaseReplication, recombination and repair [L] 4.73
COG0192S-adenosylmethionine synthetaseCoenzyme transport and metabolism [H] 4.05
COG0002N-acetyl-gamma-glutamylphosphate reductaseAmino acid transport and metabolism [E] 2.03
COG0136Aspartate-semialdehyde dehydrogenaseAmino acid transport and metabolism [E] 2.03
COG0777Acetyl-CoA carboxylase beta subunitLipid transport and metabolism [I] 2.03
COG0825Acetyl-CoA carboxylase alpha subunitLipid transport and metabolism [I] 2.03
COG4799Acetyl-CoA carboxylase, carboxyltransferase componentLipid transport and metabolism [I] 2.03
COG0657Acetyl esterase/lipaseLipid transport and metabolism [I] 1.35
COG0810Periplasmic protein TonB, links inner and outer membranesCell wall/membrane/envelope biogenesis [M] 1.35
COG1538Outer membrane protein TolCCell wall/membrane/envelope biogenesis [M] 1.35
COG1846DNA-binding transcriptional regulator, MarR familyTranscription [K] 1.35
COG20792-methylcitrate dehydratase PrpDCarbohydrate transport and metabolism [G] 1.35
COG2133Glucose/arabinose dehydrogenase, beta-propeller foldCarbohydrate transport and metabolism [G] 1.35
COG3682Transcriptional regulator, CopY/TcrY familyTranscription [K] 1.35
COG1671Uncharacterized conserved protein YaiI, UPF0178 familyFunction unknown [S] 0.68
COG1680CubicO group peptidase, beta-lactamase class C familyDefense mechanisms [V] 0.68
COG1686D-alanyl-D-alanine carboxypeptidaseCell wall/membrane/envelope biogenesis [M] 0.68
COG2272Carboxylesterase type BLipid transport and metabolism [I] 0.68
COG2367Beta-lactamase class ADefense mechanisms [V] 0.68
COG3182PepSY-associated TM regionFunction unknown [S] 0.68
COG3295Uncharacterized conserved proteinFunction unknown [S] 0.68
COG3544Uncharacterized conserved protein, DUF305 familyFunction unknown [S] 0.68
COG3753Uncharacterized conserved protein YidB, DUF937 familyFunction unknown [S] 0.68
COG4636Endonuclease, Uma2 family (restriction endonuclease fold)General function prediction only [R] 0.68
COG4681Uncharacterized conserved protein YaeQ, suppresses RfaH defectFunction unknown [S] 0.68


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms95.27 %
UnclassifiedrootN/A4.73 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000364|INPhiseqgaiiFebDRAFT_105383003All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium1168Open in IMG/M
3300000891|JGI10214J12806_11010658All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium559Open in IMG/M
3300000955|JGI1027J12803_104352206All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium1272Open in IMG/M
3300001686|C688J18823_10520423All Organisms → cellular organisms → Bacteria762Open in IMG/M
3300004156|Ga0062589_102697834All Organisms → cellular organisms → Bacteria → Acidobacteria517Open in IMG/M
3300004463|Ga0063356_100066989All Organisms → cellular organisms → Bacteria3713Open in IMG/M
3300004463|Ga0063356_103696199All Organisms → cellular organisms → Bacteria → Acidobacteria659Open in IMG/M
3300004643|Ga0062591_100381485All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1155Open in IMG/M
3300005186|Ga0066676_10710564All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium684Open in IMG/M
3300005294|Ga0065705_10629227All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium690Open in IMG/M
3300005295|Ga0065707_10298343All Organisms → cellular organisms → Bacteria1010Open in IMG/M
3300005328|Ga0070676_10598630All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium795Open in IMG/M
3300005329|Ga0070683_101957844All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium563Open in IMG/M
3300005331|Ga0070670_100651913All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium944Open in IMG/M
3300005332|Ga0066388_102875482All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae880Open in IMG/M
3300005332|Ga0066388_104872128All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium682Open in IMG/M
3300005332|Ga0066388_104989672All Organisms → cellular organisms → Bacteria → Acidobacteria674Open in IMG/M
3300005332|Ga0066388_105618166All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium635Open in IMG/M
3300005332|Ga0066388_106625438All Organisms → cellular organisms → Bacteria → Acidobacteria584Open in IMG/M
3300005333|Ga0070677_10204897All Organisms → cellular organisms → Bacteria → Proteobacteria954Open in IMG/M
3300005335|Ga0070666_10104182All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1958Open in IMG/M
3300005353|Ga0070669_101957930All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium512Open in IMG/M
3300005354|Ga0070675_100549828All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → unclassified Caulobacterales → Caulobacterales bacterium 32-69-101044Open in IMG/M
3300005355|Ga0070671_100825889Not Available808Open in IMG/M
3300005364|Ga0070673_101274354All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium690Open in IMG/M
3300005364|Ga0070673_101378366All Organisms → cellular organisms → Bacteria663Open in IMG/M
3300005439|Ga0070711_100086317All Organisms → cellular organisms → Bacteria2250Open in IMG/M
3300005441|Ga0070700_101937593All Organisms → cellular organisms → Bacteria510Open in IMG/M
3300005446|Ga0066686_10604191All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium746Open in IMG/M
3300005455|Ga0070663_100080828All Organisms → cellular organisms → Bacteria2388Open in IMG/M
3300005456|Ga0070678_102071471All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium539Open in IMG/M
3300005457|Ga0070662_101039411All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium702Open in IMG/M
3300005459|Ga0068867_101068747All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium735Open in IMG/M
3300005471|Ga0070698_100288319Not Available1573Open in IMG/M
3300005518|Ga0070699_101988146All Organisms → cellular organisms → Bacteria531Open in IMG/M
3300005544|Ga0070686_101031307All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium676Open in IMG/M
3300005548|Ga0070665_102584231All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium509Open in IMG/M
3300005564|Ga0070664_100994641All Organisms → cellular organisms → Bacteria → Acidobacteria788Open in IMG/M
3300005615|Ga0070702_101281430All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium594Open in IMG/M
3300005616|Ga0068852_100675833All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium1041Open in IMG/M
3300005617|Ga0068859_101340499All Organisms → cellular organisms → Bacteria → Acidobacteria789Open in IMG/M
3300005618|Ga0068864_100169264All Organisms → cellular organisms → Bacteria1991Open in IMG/M
3300005618|Ga0068864_101205599All Organisms → cellular organisms → Bacteria755Open in IMG/M
3300005764|Ga0066903_103129074All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium896Open in IMG/M
3300005764|Ga0066903_108126529All Organisms → cellular organisms → Bacteria → Acidobacteria537Open in IMG/M
3300005842|Ga0068858_100155033All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium2155Open in IMG/M
3300005843|Ga0068860_101436513All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium711Open in IMG/M
3300006049|Ga0075417_10694515All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium522Open in IMG/M
3300006058|Ga0075432_10369163All Organisms → cellular organisms → Bacteria → Proteobacteria612Open in IMG/M
3300006237|Ga0097621_100429937All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1186Open in IMG/M
3300006358|Ga0068871_100838976All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium849Open in IMG/M
3300006358|Ga0068871_101027916Not Available768Open in IMG/M
3300006852|Ga0075433_10648226All Organisms → cellular organisms → Bacteria → Proteobacteria926Open in IMG/M
3300006853|Ga0075420_100480611All Organisms → cellular organisms → Bacteria1073Open in IMG/M
3300006853|Ga0075420_101176075All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium659Open in IMG/M
3300006871|Ga0075434_101021186All Organisms → cellular organisms → Bacteria841Open in IMG/M
3300006969|Ga0075419_10704509All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium716Open in IMG/M
3300007004|Ga0079218_10589919All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1011Open in IMG/M
3300007004|Ga0079218_13516637All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium532Open in IMG/M
3300009094|Ga0111539_10573242All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium1315Open in IMG/M
3300009094|Ga0111539_10912443All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1022Open in IMG/M
3300009094|Ga0111539_11123794All Organisms → cellular organisms → Bacteria913Open in IMG/M
3300009094|Ga0111539_11478632All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium788Open in IMG/M
3300009100|Ga0075418_11648759All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium697Open in IMG/M
3300009147|Ga0114129_10038161All Organisms → cellular organisms → Bacteria6779Open in IMG/M
3300009148|Ga0105243_10365080All Organisms → cellular organisms → Bacteria1330Open in IMG/M
3300009156|Ga0111538_10011238All Organisms → cellular organisms → Bacteria11884Open in IMG/M
3300009156|Ga0111538_10808221All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium1187Open in IMG/M
3300009162|Ga0075423_11514674All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Paenibacillaceae → Paenibacillus720Open in IMG/M
3300009176|Ga0105242_12557617All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium559Open in IMG/M
3300009176|Ga0105242_13138879All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium512Open in IMG/M
3300009553|Ga0105249_13055999All Organisms → cellular organisms → Bacteria → Acidobacteria537Open in IMG/M
3300009792|Ga0126374_10107794All Organisms → cellular organisms → Bacteria1598Open in IMG/M
3300010046|Ga0126384_11530126Not Available626Open in IMG/M
3300010360|Ga0126372_11578237All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium694Open in IMG/M
3300010362|Ga0126377_10152130All Organisms → cellular organisms → Bacteria → Acidobacteria2175Open in IMG/M
3300010362|Ga0126377_12513619All Organisms → cellular organisms → Bacteria591Open in IMG/M
3300010362|Ga0126377_12688097All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium573Open in IMG/M
3300010366|Ga0126379_11008109All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium937Open in IMG/M
3300010366|Ga0126379_11300385All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium833Open in IMG/M
3300010366|Ga0126379_12370363All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium630Open in IMG/M
3300010399|Ga0134127_12268230All Organisms → cellular organisms → Bacteria622Open in IMG/M
3300011423|Ga0137436_1213206All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium507Open in IMG/M
3300011436|Ga0137458_1055598All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes → Armatimonadia → Capsulimonadales → Capsulimonadaceae → Capsulimonas → Capsulimonas corticalis1072Open in IMG/M
3300012212|Ga0150985_111163379All Organisms → cellular organisms → Bacteria → Proteobacteria934Open in IMG/M
3300012469|Ga0150984_106791917All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium582Open in IMG/M
3300012519|Ga0157352_1063748All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium580Open in IMG/M
3300012893|Ga0157284_10010950All Organisms → cellular organisms → Bacteria1597Open in IMG/M
3300012904|Ga0157282_10120622All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium762Open in IMG/M
3300012908|Ga0157286_10270982All Organisms → cellular organisms → Bacteria608Open in IMG/M
3300012909|Ga0157290_10155874All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium736Open in IMG/M
3300012913|Ga0157298_10011549All Organisms → cellular organisms → Bacteria1488Open in IMG/M
3300012913|Ga0157298_10358022All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium540Open in IMG/M
3300012948|Ga0126375_11348465All Organisms → cellular organisms → Bacteria602Open in IMG/M
3300012971|Ga0126369_13172561All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium538Open in IMG/M
3300013297|Ga0157378_10591177All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium1120Open in IMG/M
3300013297|Ga0157378_11653688All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium687Open in IMG/M
3300013306|Ga0163162_11003315All Organisms → cellular organisms → Bacteria944Open in IMG/M
3300013308|Ga0157375_10795782All Organisms → cellular organisms → Bacteria1094Open in IMG/M
3300014166|Ga0134079_10633955All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium536Open in IMG/M
3300014321|Ga0075353_1194598All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium538Open in IMG/M
3300014321|Ga0075353_1196292All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium536Open in IMG/M
3300014325|Ga0163163_12438461All Organisms → cellular organisms → Bacteria581Open in IMG/M
3300014326|Ga0157380_12096720All Organisms → cellular organisms → Bacteria → Acidobacteria628Open in IMG/M
3300014969|Ga0157376_10903958Not Available901Open in IMG/M
3300015200|Ga0173480_10843481All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium589Open in IMG/M
3300015372|Ga0132256_101120342All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium901Open in IMG/M
3300015373|Ga0132257_104185034All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium525Open in IMG/M
3300015374|Ga0132255_103911909All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium632Open in IMG/M
3300016319|Ga0182033_11422417Not Available625Open in IMG/M
3300016357|Ga0182032_11342541All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium618Open in IMG/M
3300018083|Ga0184628_10079700All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium1670Open in IMG/M
3300018481|Ga0190271_11282008All Organisms → cellular organisms → Bacteria853Open in IMG/M
3300019377|Ga0190264_10111067All Organisms → cellular organisms → Bacteria1315Open in IMG/M
3300021081|Ga0210379_10361223All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium639Open in IMG/M
3300021560|Ga0126371_13074539All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium565Open in IMG/M
3300023071|Ga0247752_1070200All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium572Open in IMG/M
3300025165|Ga0209108_10528183All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium562Open in IMG/M
3300025903|Ga0207680_10497691All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium868Open in IMG/M
3300025916|Ga0207663_10134150All Organisms → cellular organisms → Bacteria → Acidobacteria1715Open in IMG/M
3300025922|Ga0207646_11941544All Organisms → cellular organisms → Bacteria → Acidobacteria501Open in IMG/M
3300025926|Ga0207659_11058638All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium698Open in IMG/M
3300025927|Ga0207687_10453105All Organisms → cellular organisms → Bacteria1064Open in IMG/M
3300025934|Ga0207686_11520758All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium552Open in IMG/M
3300025940|Ga0207691_10493357All Organisms → cellular organisms → Bacteria → Proteobacteria1040Open in IMG/M
3300025960|Ga0207651_10803219All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium834Open in IMG/M
3300025960|Ga0207651_12033722All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium516Open in IMG/M
3300026023|Ga0207677_10011805All Organisms → cellular organisms → Bacteria → Acidobacteria4996Open in IMG/M
3300026023|Ga0207677_11710621All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium583Open in IMG/M
3300026075|Ga0207708_11760129All Organisms → cellular organisms → Bacteria544Open in IMG/M
3300026095|Ga0207676_12325477All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium533Open in IMG/M
3300027873|Ga0209814_10523394All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium526Open in IMG/M
3300027909|Ga0209382_11605020All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium643Open in IMG/M
3300028146|Ga0247682_1078850All Organisms → cellular organisms → Bacteria → Acidobacteria605Open in IMG/M
3300028812|Ga0247825_11205468All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium552Open in IMG/M
3300031547|Ga0310887_10904624All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium559Open in IMG/M
3300031716|Ga0310813_10569403All Organisms → cellular organisms → Bacteria998Open in IMG/M
3300031854|Ga0310904_10304074All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium1011Open in IMG/M
3300031908|Ga0310900_10129526All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium1673Open in IMG/M
3300031912|Ga0306921_11611178Not Available705Open in IMG/M
3300031940|Ga0310901_10311254All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium664Open in IMG/M
3300032003|Ga0310897_10500557All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium589Open in IMG/M
3300032012|Ga0310902_10382012All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium891Open in IMG/M
3300032075|Ga0310890_10052518All Organisms → cellular organisms → Bacteria2339Open in IMG/M
3300032163|Ga0315281_11440384All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium677Open in IMG/M
3300032180|Ga0307471_100886020All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium1060Open in IMG/M
3300032256|Ga0315271_11189983All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium659Open in IMG/M
3300034820|Ga0373959_0205266All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium522Open in IMG/M



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere12.16%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil8.11%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil6.76%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere6.76%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil5.41%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere5.41%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil4.73%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere4.05%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil3.38%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere3.38%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere3.38%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere2.70%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil2.03%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere2.03%
Miscanthus RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere2.03%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere2.03%
SedimentEnvironmental → Aquatic → Freshwater → Lake → Sediment → Sediment1.35%
SoilEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Soil1.35%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere1.35%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil1.35%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil1.35%
Natural And Restored WetlandsEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands1.35%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere1.35%
Arabidopsis Thaliana RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere1.35%
Groundwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment0.68%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment0.68%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil0.68%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil0.68%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil0.68%
Unplanted SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Unplanted Soil0.68%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil0.68%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil0.68%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil0.68%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil0.68%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere0.68%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere0.68%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere0.68%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere0.68%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere0.68%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere0.68%
Switchgrass RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere0.68%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.68%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.68%
Rhizosphere SoilHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil0.68%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere0.68%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere0.68%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000364Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
3300000891Soil microbial communities from Great Prairies - Wisconsin, Continuous corn soilEnvironmentalOpen in IMG/M
3300000955Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
3300001686Grasslands soil microbial communities from Hopland, California, USAEnvironmentalOpen in IMG/M
3300004156Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1EnvironmentalOpen in IMG/M
3300004463Combined assembly of Arabidopsis thaliana microbial communitiesHost-AssociatedOpen in IMG/M
3300004643Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3EnvironmentalOpen in IMG/M
3300005186Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125EnvironmentalOpen in IMG/M
3300005294Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk SoilEnvironmentalOpen in IMG/M
3300005295Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3EnvironmentalOpen in IMG/M
3300005328Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaGHost-AssociatedOpen in IMG/M
3300005329Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaGEnvironmentalOpen in IMG/M
3300005331Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaGHost-AssociatedOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005333Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaGHost-AssociatedOpen in IMG/M
3300005335Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaGHost-AssociatedOpen in IMG/M
3300005353Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaGHost-AssociatedOpen in IMG/M
3300005354Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaGHost-AssociatedOpen in IMG/M
3300005355Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaGHost-AssociatedOpen in IMG/M
3300005364Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaGHost-AssociatedOpen in IMG/M
3300005439Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaGEnvironmentalOpen in IMG/M
3300005441Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaGEnvironmentalOpen in IMG/M
3300005446Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135EnvironmentalOpen in IMG/M
3300005455Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaGHost-AssociatedOpen in IMG/M
3300005456Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaGHost-AssociatedOpen in IMG/M
3300005457Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaGHost-AssociatedOpen in IMG/M
3300005459Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2Host-AssociatedOpen in IMG/M
3300005471Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaGEnvironmentalOpen in IMG/M
3300005518Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaGEnvironmentalOpen in IMG/M
3300005544Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaGEnvironmentalOpen in IMG/M
3300005548Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaGHost-AssociatedOpen in IMG/M
3300005564Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaGHost-AssociatedOpen in IMG/M
3300005615Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaGEnvironmentalOpen in IMG/M
3300005616Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2Host-AssociatedOpen in IMG/M
3300005617Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2Host-AssociatedOpen in IMG/M
3300005618Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2Host-AssociatedOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300005842Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2Host-AssociatedOpen in IMG/M
3300005843Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2Host-AssociatedOpen in IMG/M
3300006049Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1Host-AssociatedOpen in IMG/M
3300006058Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1Host-AssociatedOpen in IMG/M
3300006237Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)Host-AssociatedOpen in IMG/M
3300006358Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2Host-AssociatedOpen in IMG/M
3300006852Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2Host-AssociatedOpen in IMG/M
3300006853Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4Host-AssociatedOpen in IMG/M
3300006871Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3Host-AssociatedOpen in IMG/M
3300006969Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3Host-AssociatedOpen in IMG/M
3300007004Agricultural soil microbial communities from Utah to study Nitrogen management - NC CompostEnvironmentalOpen in IMG/M
3300009094Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009100Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2Host-AssociatedOpen in IMG/M
3300009147Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)Host-AssociatedOpen in IMG/M
3300009148Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaGHost-AssociatedOpen in IMG/M
3300009156Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009162Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2Host-AssociatedOpen in IMG/M
3300009176Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaGHost-AssociatedOpen in IMG/M
3300009553Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaGHost-AssociatedOpen in IMG/M
3300009792Tropical forest soil microbial communities from Panama - MetaG Plot_12EnvironmentalOpen in IMG/M
3300010046Tropical forest soil microbial communities from Panama - MetaG Plot_36EnvironmentalOpen in IMG/M
3300010360Tropical forest soil microbial communities from Panama - MetaG Plot_6EnvironmentalOpen in IMG/M
3300010362Tropical forest soil microbial communities from Panama - MetaG Plot_22EnvironmentalOpen in IMG/M
3300010366Tropical forest soil microbial communities from Panama - MetaG Plot_24EnvironmentalOpen in IMG/M
3300010399Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3EnvironmentalOpen in IMG/M
3300011423Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT119_2EnvironmentalOpen in IMG/M
3300011436Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT642_2EnvironmentalOpen in IMG/M
3300012212Combined assembly of Hopland grassland soilHost-AssociatedOpen in IMG/M
3300012469Combined assembly of Soil carbon rhizosphereHost-AssociatedOpen in IMG/M
3300012519Unplanted soil (control) microbial communities from North Carolina - M.Soil.7.yng.070610EnvironmentalOpen in IMG/M
3300012893Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S059-202B-1EnvironmentalOpen in IMG/M
3300012904Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S029-104C-1EnvironmentalOpen in IMG/M
3300012908Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S089-202R-1EnvironmentalOpen in IMG/M
3300012909Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S149-409B-1EnvironmentalOpen in IMG/M
3300012913Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S043-104R-2EnvironmentalOpen in IMG/M
3300012948Tropical forest soil microbial communities from Panama - MetaG Plot_14EnvironmentalOpen in IMG/M
3300012971Tropical forest soil microbial communities from Panama - MetaG Plot_1EnvironmentalOpen in IMG/M
3300013297Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaGHost-AssociatedOpen in IMG/M
3300013306Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaGHost-AssociatedOpen in IMG/M
3300013308Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaGHost-AssociatedOpen in IMG/M
3300014166Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09182015EnvironmentalOpen in IMG/M
3300014321Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_TuleB_D1EnvironmentalOpen in IMG/M
3300014325Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaGHost-AssociatedOpen in IMG/M
3300014326Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaGHost-AssociatedOpen in IMG/M
3300014969Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaGHost-AssociatedOpen in IMG/M
3300015200Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1 (version 2)EnvironmentalOpen in IMG/M
3300015372Soil combined assemblyHost-AssociatedOpen in IMG/M
3300015373Combined assembly of cpr5 rhizosphereHost-AssociatedOpen in IMG/M
3300015374Col-0 rhizosphere combined assemblyHost-AssociatedOpen in IMG/M
3300016319Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00HEnvironmentalOpen in IMG/M
3300016357Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000EnvironmentalOpen in IMG/M
3300018083Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_b1EnvironmentalOpen in IMG/M
3300018481Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 TEnvironmentalOpen in IMG/M
3300019377Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 TEnvironmentalOpen in IMG/M
3300021081Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_coex redoEnvironmentalOpen in IMG/M
3300021560Tropical forest soil microbial communities from Panama - MetaG Plot_4EnvironmentalOpen in IMG/M
3300023071Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S019-104C-5EnvironmentalOpen in IMG/M
3300025165Soil microbial communities from Rifle, Colorado, USA - sediment 10ft 1EnvironmentalOpen in IMG/M
3300025903Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025916Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025922Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025926Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025927Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025934Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025940Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025960Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026023Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026075Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026095Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300027873Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)Host-AssociatedOpen in IMG/M
3300027909Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)Host-AssociatedOpen in IMG/M
3300028146Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK23EnvironmentalOpen in IMG/M
3300028812Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Vanillin_Day48EnvironmentalOpen in IMG/M
3300031547Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D4EnvironmentalOpen in IMG/M
3300031716Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3EnvironmentalOpen in IMG/M
3300031854Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1EnvironmentalOpen in IMG/M
3300031908Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1EnvironmentalOpen in IMG/M
3300031912Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)EnvironmentalOpen in IMG/M
3300031940Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D2EnvironmentalOpen in IMG/M
3300032003Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D1EnvironmentalOpen in IMG/M
3300032012Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D3EnvironmentalOpen in IMG/M
3300032075Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3EnvironmentalOpen in IMG/M
3300032163Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G07_0EnvironmentalOpen in IMG/M
3300032180Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515EnvironmentalOpen in IMG/M
3300032256Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C3_topEnvironmentalOpen in IMG/M
3300034820Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_2Host-AssociatedOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
INPhiseqgaiiFebDRAFT_10538300323300000364SoilETGNYSAGVLNQYVEQPGQPTKGLLHSAALTSVERLHLDAERQRLVVEIDLTDPEFFKQAFARSTNEYAPSALKIEPFKCSPEGVTGTIRK*
JGI10214J12806_1101065823300000891SoilVVNQYVEQPGQPTKGLLHSAALTTIERLHLDAARQRLVVEIDMTDAEFFKQPFPRATYEYSPSDLKIEAFKCSPEGLTGTIKNQK*
JGI1027J12803_10435220613300000955SoilYSAGVLNQYVEQPGQPTKGLLHSAALTSVERLHLDAERQRLVVEIDLTDPEFFKQAFARSTNEYAPSALKIEPFKCSPEGVTGTIRK*
C688J18823_1052042323300001686SoilPGQPTKGLLHSAAFTTTERIHFDAARQRLVVEFDMNDPEYFTQPFQRSSLEYVPSALKIEPFNCSPEGVTGTLRK*
Ga0062589_10269783423300004156SoilGLLHSAALTSVERLHLDPARQRLVVEIDLVDNDFFKQPFPRATMEFAASDLKIEPFNCSREGVTGTVRK*
Ga0063356_10006698923300004463Arabidopsis Thaliana RhizosphereMFSRIAFHSSIAVLTVETGNYSPGVLEQYVERRGQPTKGLLHSALLTTVERIRIDQASQRLVVEVVATDPEFFRQPLPPETMEYSPSSLKLAPFKCARQGLTGTIR*
Ga0063356_10369619913300004463Arabidopsis Thaliana RhizosphereETGNYAPGVLNQYVEQPGQPTKGLLHSAALTTVERLHVDSARQRLVVEFDMTDPEFFKQPFPHASLEYSPSDLKIEPFKCSPEGLTGTIRNPGK*
Ga0062591_10038148523300004643SoilHMEGDTLVVETANYPNGVVNQYVEQAGQPTKGLLHSAALTTVERLHLDPARQRLVVEVDMADPEYFTQPFARATYEYAASDLKIEPFNCSPEGTTGTLKK*
Ga0066676_1071056423300005186SoilYSAGVLNQYVETAGQPTKGLLHSAALTSVERLHLDADGQRLVVEIDLTDPEFFKQAFARSTNEYAPSDLKIEPFNCSREGVTGTIRK*
Ga0065705_1062922713300005294Switchgrass RhizosphereGVLNQYVEQPGQPTKGLLHSATLTSVERLHLDAERQRLVVEIDLTDPEFFKQAFARSTNEYAPSALKIEPFKCSPEGVTGTIRK*
Ga0065707_1029834323300005295Switchgrass RhizosphereTANYSAGVLNQYVEQPGQPTKGLLHSAALTSVERLHLDAARQRLVVEIDLLDPEFFKQPFPRSTSEYAASDLKIEPFNCSREGVTGTAKK*
Ga0070676_1059863013300005328Miscanthus RhizosphereGQPTKGLLHSAALTSVERLHLDPARQRLVVEVDLSDPEFFKQAFPRSTNEYAPSALKIEPFKCSPEGPTGTIRKASQ*
Ga0070683_10195784423300005329Corn RhizosphereVLNQYVEQPGQPTKGLLHSAALTSVERVHLDAARQRLIVEIDLTDPEYFKQPFPRSTNEYAASDLKIEPFNCSPEGVTGTLKK*
Ga0070670_10065191313300005331Switchgrass RhizosphereIETANYSAGVLNQYVEQPGQPTKGLLHSAALTTVERLHLDAARQRLVLEVDMTDPDFFKQAFPRATNEYAPSNLKIEPFNCSPEGVTGTIKKKA*
Ga0066388_10287548223300005332Tropical Forest SoilSAGVLNQYVEQPGQPTKGLLHSAALTTVERLHVDAARQRLVVESDMTDLEFFKEPFPKATQEYSASDLKIEPFKCSPEGLTGTIRNGTK*
Ga0066388_10487212813300005332Tropical Forest SoilAGVLNQYVEQPGQPTKGLLHSAALTSVERVHLDAPRQRLVVEVDLADPDYFTRSFDRTTYEYAPSALKMEKFNCSPEGVTGSLKK*
Ga0066388_10498967223300005332Tropical Forest SoilQPTKGLLHSAALTTVERLHVDTARQRLVVEVDMTDPEFFKQPFPRAAMEYLPSDLKIEPFKCSPEGLTGTIRK*
Ga0066388_10561816613300005332Tropical Forest SoilQYVEQQGQPTKGLLHSPALVTVERLHVDAERQRLVVEVGMTDSEFFKQPPTRLTMEYSPSDLKIEPFKCSPEGLTGTIRKATK*
Ga0066388_10662543823300005332Tropical Forest SoilNQYVEQPGQPTKGLLHSAVLTTVERLHVDTAKQRLVVEVDMTDPEFFKQPFPRAVMEYLPSDLKIEPFKCSPEGLTGTIRK*
Ga0070677_1020489713300005333Miscanthus RhizosphereIETANYSKGVLNQYVEQPGQPTKGLLHSAALTSVERLHLDTARQRLVVEIDLTDPEYFKQPFPRSTNEYAASDLKIEPFNCSPEGVTGTLKK*
Ga0070666_1010418213300005335Switchgrass RhizosphereASLTTIERLQLDRASQRLIVEVDVTDPQFYKQPLPRLTMEYSPSDLKITPFKCAREGPNGMIGKATK*
Ga0070669_10195793013300005353Switchgrass RhizosphereEQPGQPTKGLLHSAALTSVERLHLDAARQRLVVEVDLSDPDFFKQAFPRSTNEYAPSALKIEPFKCSPEGVTGTIRKAS*
Ga0070675_10054982813300005354Miscanthus RhizosphereGVLEQYVERRGQPTKGLLHSAALTTVERLRVDVESQRLVVDVDVTDPEFFKQPLARLTMEYSPSDLKIAPFKCSREGLTGTIRNPAK*
Ga0070671_10082588923300005355Switchgrass RhizosphereYVEQPGQPTKGLLHSAALTTIERIHLDTARQRLIVDMDQTDPDFFKQPFPRVSMEYSASDLKIEPFKCTPEGINGTARNATK*
Ga0070673_10127435423300005364Switchgrass RhizosphereSAGVLNQYVEQAGQPTKGLLHSAALTTIERLHVDAARQRLVVEIDMTDPEFFKQPFPRATMEYSASDLKIEPFKCSPEGLTGTARSK*
Ga0070673_10137836613300005364Switchgrass RhizosphereKGLLHSASLTTVERLHVDPARQRLIVDVDITDPEFFKQPLARETMEYSPSDLKILPFKCSREGLTGTIRN*
Ga0070711_10008631713300005439Corn, Switchgrass And Miscanthus RhizosphereQYVETRGQPTKGLLHSAALTSVERVHLDAAAQRLVVEIDLADPEFFKQPFARSTSEYAPSELKIEPFNCSPEGVTGTVKKVATR*
Ga0070700_10193759313300005441Corn, Switchgrass And Miscanthus RhizosphereGVLEQYVEQRGQPTKGLLHSASLTTVERLHVDSARQRLVVDVDITDPVFFKQPLPRETMEYSPSDLNIMPFKCSREGLTGTIRNAAKP*
Ga0066686_1060419123300005446SoilGNYSAGVLNQYVEQPGQPTKGLLHSAALTTVERLHVDTARQRLVVEVDMADPEFFKQPFPRAATEYLPSDLKIEPFKCSPEGLTGTIRK*
Ga0070663_10008082813300005455Corn RhizosphereGLLHSAALTSVERVHLDAARQRLIVEIDLTDPEYFKQPFPRSTNEYAASDLKIEPFNCSPEGVTGTLKK*
Ga0070678_10207147123300005456Miscanthus RhizosphereALHSASLTTIERLQLDRASQRLIVEVDVTDPQFYKQPLPRLTMEYSPSDLKITPFKCAREGPTGMIGKGTK*
Ga0070662_10103941123300005457Corn RhizosphereLLHSAALTSVERLHLDAARQRLVVEVDLSDPDFFKQAFPRSTNEYAPSALKIEPFKCSPEGVTGTIRKAS*
Ga0068867_10106874723300005459Miscanthus RhizosphereSAGVLNQYVEQQGQPTKGLLHSAALTTVERLHVDAARQRLVVEVDMTDPEFFKQPFPRATNEYAPSALKIEPFNCSPEGVTGTIKK*
Ga0070698_10028831923300005471Corn, Switchgrass And Miscanthus RhizosphereEQPGQPTKGLLHSAALTTVERLHLDAARQRLVLEVDMADHEFFTQSFPRGVNEYAPSNLKIEPFNCSREGVTGTIKKKA*
Ga0070699_10198814623300005518Corn, Switchgrass And Miscanthus RhizosphereLLHSAALTTVERLRLDPARQRLVVEVDMADPEYFSQPFPRASYQYAASDLKIEPFNCSPEGTTGTLKK*
Ga0070686_10103130723300005544Switchgrass RhizosphereGQPTKGLLHSAALTSVERVHLDAARQRLVVEVDLQDPEFFKQAFATTTLEYAPSSLKIEPFNCSPESVTGSIKK*
Ga0070665_10258423123300005548Switchgrass RhizosphereVLNQYVEQAGQPTKGLLHSAALTSVERLHFDAARQRLVVEIDLSDNDFFKQPFPRATLEFAPSDLKIEPFNCSREGVTGTVRR*
Ga0070664_10099464123300005564Corn RhizosphereANYSKGVLNQYVEQPNQPTKGLLHSAALTTTERLHLDAARQRLVVDIDMSDPEYFKQPFPRATMEYAVSNLKLEPFNCSPEGVTGALRK*
Ga0070702_10128143013300005615Corn, Switchgrass And Miscanthus RhizosphereGQPTKGLLHSAALTTVERLHVDTARQRLVVEVDMTDPEFFKQPFPRAATEYAPSDLKIEPFKCSREGLTGTIRNTAK*
Ga0068852_10067583313300005616Corn RhizosphereLNQYVEQPGQPTKGLLHSAALTTTERLHLDAARQRLVLDVDMADPEFFKQAFPRGTNEYAPSNLKIEPFNCSPEGVTGTIKKKA*
Ga0068859_10134049913300005617Switchgrass RhizospherePGQPTKGLLHSTALATVERLHVDTARQRLVVEVDMTDPEFFKQPFSRAATEYSPSDLKIEPFKCSREGLTGTIRQ*
Ga0068864_10016926433300005618Switchgrass RhizosphereTGNYSAGVLEQYVEQRGQPTKGLLHSASLTTVERLHVDSARQRLVVDVDITDPVFFKQPLPRETMEYSPSDLNIMPFKCSREGLTGTIRNAAKP*
Ga0068864_10120559923300005618Switchgrass RhizosphereVEQPGQPTKGLLHSAALTTTERLHLDAARQRLVLEVDMTDPEFFKQPFPRGTNEYAPSNLKIEPFNCSPEGVTGTIKTAAR*
Ga0066903_10312907423300005764Tropical Forest SoilIETANYSAGVLNQYVEEKGQPTKGLLHSAALTSVERLHLDAARQRLVVEIDLTDPEFFTQPFPRSTQEYAASSLKIEPFNCSPEGVTGTLRK*
Ga0066903_10812652913300005764Tropical Forest SoilGNYSAGVLNQYVEQPGQPTKGLLHSAVLTTVERLHIDTVRQRLVVEFDMTDPEFFKQPFPHAASEYSPSDLKIEPFKCSPEGLTGTIRK*
Ga0068858_10015503343300005842Switchgrass RhizosphereYAAGVLNQYVEQPGQPTKGLLHSASLTTVERLHLDAARQRLIVEIDMTDPEFFKQPFPRATMEYAASDLKIEPFKCSPEGPAGTIRSAGK*
Ga0068860_10143651313300005843Switchgrass RhizosphereDTLIIETANYSAGVLNQYVEQPGQPTKGLLHSAALTTVERLHLDAARQRLVVEIDMTDPEFFKQPFPRATMEYSPSDLKIEPFKCSPEGLTGPIRNSGK*
Ga0075417_1069451513300006049Populus RhizosphereSTGVLNQYVEQPGQPTKGLLHSAALTSVERLHLDPTRQRLVVEIDLADPEFFKQPFPRSTNEYAPSALKIEKFNCSPEGVTGTIRK*
Ga0075432_1036916313300006058Populus RhizosphereVIETGNYPNGVVNQYVEQPGQPTKGLLHSSALTTVERLHLDPARQRLVVEVDMADPEYFTQPFARATYEYAASELKIEPFNCSPEGTTGTLKK*
Ga0097621_10042993713300006237Miscanthus RhizosphereLNQYVEQPGQPTKGLLHSAALTTTERLHLDAARQRLVLEVDMTDPEFFKQPFPRGTNEYAPSNLKIEPFNCSPEGVTGTIKKKA*
Ga0068871_10083897613300006358Miscanthus RhizosphereKGLLHSAALTSVERLHLDAARQRLVVEIDLTDTEFFKQPFPRTTMEYSASDLKVEPFKCSPEDKNGTIRNPGK*
Ga0068871_10102791613300006358Miscanthus RhizosphereNQYVEQAGQPTKGLLHSAALTTVERLRVDAARQRLVVDIDQTDPEFFKQPFPRGTLEYSASDLKIEPFKCTPEGLTGTHKPL*
Ga0075433_1064822613300006852Populus RhizosphereIETGNYPNGVVNQYVEQPGQPTKGLLHSSALTTVERLHLDPARQRLVVEVDMADPEYFTQPFARATYEYAASELKIEPFNCSPEGTTGTLKK*
Ga0075420_10048061123300006853Populus RhizosphereYSTGVLNQYVEQPGQPTKGLLHSAALTTVERLHVDAARQRLIVEFDMTDPEFFKQPFPHASLEYSTSNLKIEPFKCSPEGLTGTIRNTGK*
Ga0075420_10117607513300006853Populus RhizosphereLNQYVEQPGQPTKGLLHSAALTTIERLHVDLERQRLVVEVDMTDPDFFKQPFPRARTEYAPSGLKIEPFKCSREGLTGTIGTGK*
Ga0075434_10102118623300006871Populus RhizosphereNYSAGVLNQYVEQAGQPTKGLLHSAALTTVERIHVDAARQRLVVEVDLTDPEFFKQPFPRGTTEYSPSDLKIEPFKCSPEGLTGTIRK*
Ga0075419_1070450933300006969Populus RhizosphereQYVEQPGQPTKGLLHSAALTSVERLHLDAARQRLVVEVDLSDPEFFTQAFPRSLNEYAPSALKIEPFKCSPEGVTGTIRK*
Ga0079218_1058991913300007004Agricultural SoilIETGNYSAGVLNQYVEQPGQPTKGLLHSAALTSVERLHLDAARQRLVVEIDLTDPEFFKQAFPRSTNEYAPSALKIEPFKCSPEGPTGTIRK*
Ga0079218_1351663723300007004Agricultural SoilQPTKGLLHSAALVTVERLHLDAARQRLVLEIDTTDPEFFKQPFPRAMFEYAPSNLKIEPFKCSPEGLTGSIKPTK*
Ga0111539_1057324223300009094Populus RhizosphereVIETGNYSAGVLNQYVEQPGQPTKGLLHSAALTSVERLHLDAARQRLVVEVDLSDPDFFKQAFPRSTNEYAPSALKIEPFKCSPEGVTGTIRKAS*
Ga0111539_1091244323300009094Populus RhizosphereDTLVIATGNYSAGVLEQYVEQRGQPTKGLLHSASLTTIERLHIDGARQRLIVEVDVTDPEFYKQPLTRMTMEYSPSDLKIAPFNCAREGLTGMIRNAPK*
Ga0111539_1112379433300009094Populus RhizosphereGLLHSAALTSVERLSFDAARQRLVVEVELKDPEFFTRDFNVAHMEYAASDLTLEPFNCSREGVTGTIAR*
Ga0111539_1147863213300009094Populus RhizosphereLNQYVEQPGQPTKGLLHSAALTSVERVHLDAARQRLVVEIDLLDPEFFKQPFPRGTLEYAASDLKIEPFKCSPEGLTGTAKNRGK*
Ga0075418_1164875923300009100Populus RhizosphereDGDMLVIETANYSKGVLNQYVEQPGQPTKGLLHSAALTSVERLHLDAARQRLVVEVDLTDPEFFKQPFPRSTNEYAPSALKIEPFKCSPEGPTGTIRTSR*
Ga0114129_1003816183300009147Populus RhizosphereVIETGNYSAGVLNQYVEQPGQPTKGLLHSAALMTVERLHVDTARQRLVVEVDMTDPEFFKQPFPRAVMEYLPSDLKIEPFKCSPEGLTGTIRK*
Ga0105243_1036508013300009148Miscanthus RhizosphereGLLHSAALTSVEHLHLDAARQRLVVEIDLTDTEFFKQPFPRTTMEYAASDLKIQPFKCSPEDKNGTIRNPGK*
Ga0111538_10011238123300009156Populus RhizosphereLHSAALTTVERLRVDVERQRLVVDVDVTDPEFFKQPLGRLTMEYSPSDLKIAPFKCSREGLTGTIRNPAK*
Ga0111538_1080822123300009156Populus RhizosphereMSNSPASRPGGLLHSAALTSVERLHLDAERQRLVVEIDLTDPEFFKQAFARSTNEYAPSALKIEPFKCSPEGPTGTIRKASQ*
Ga0075423_1151467413300009162Populus RhizosphereEQPGQPTKGLLHSSALTTVERLHLDPARQRLVVEVDMADPEYFTQPFARATYEYAASELKIEPFNCSPEGTTGTLKK*
Ga0105242_1255761713300009176Miscanthus RhizosphereNYSAGVLNQYVEQPGQPTKGLLHSAALTSVERLHLDAARQRLVVEIDLSDPEFFKQAFARSTNEYAPTALKIEPFKCSPEGPTGTITKR*
Ga0105242_1313887913300009176Miscanthus RhizosphereEQYVERRGQPTKGLLHSAALTTVERLRVDVERQRLVVDVDVTDPEFFKQPLARLTMEYSPSDLKIAPFKCSREGLTGTIRNPAK*
Ga0105249_1305599923300009553Switchgrass RhizosphereGVLNQYVEQPGQPTKGLLHSAALATVERLHVDTARQRLVVEVDMTDPEFFKQPFSRAATEYSPSDLKIEPFKCSREGLTGTIRQ*
Ga0126374_1010779413300009792Tropical Forest SoilKGLLHSAAFTTVERLHLDATRQRLIVDVDFTDPEFFKQPPARETMEYSPSDLKIEPFKCSPEGLTGTIRKTAR*
Ga0126384_1153012613300010046Tropical Forest SoilLEQYVEQPGQPTKGLLHSPALTTVERLHVDAERQRLVVEVDMADPEFFKQPVSRMTMEYSPSDLKIEPFKCSPEGLTGTIRNAAK*
Ga0126372_1157823713300010360Tropical Forest SoilPGQPTKGLLHSAALTTVERIHVDAARQRLVVEVDMTDPEFFKQPFPRAAMEYSPSDLKIEPFKCSPEGLTGTIRAAK*
Ga0126377_1015213013300010362Tropical Forest SoilGLLHSAGLMTVERLHVDTARQRLVVEVDMTDPEFFKQPFPRAVMEYLPSDLKIEPFKCSPEGLTGTIRK*
Ga0126377_1251361913300010362Tropical Forest SoilGVLNQYVEQPGQPTKGLLHSAALTTVERIHVDAARQRLIVEVDMTDPEFFKQPFPRAATEYSPSDLKIEPFKCSPEGLTGTIRNTTK*
Ga0126377_1268809713300010362Tropical Forest SoilSAALTSVERLHFDAARQRLVVEIDQTDSDFFTQPFPRATMEYAASDLKIEPFNCSPEGVTGTVKRIASRSTQRSQRSQR*
Ga0126379_1100810913300010366Tropical Forest SoilQPGQPTKGLLHSAALTSVERIHLDAARQRLVVEIDMTDPEFFTQPFSRATMEYAVSDLKIEPFNCSPEGVTGTVRK*
Ga0126379_1130038513300010366Tropical Forest SoilPGQPTKGLLHSAALTTVERLHVDAARQRLVVEIDMTDPEFFKQPFPRATTEYTPSDLKIEPFKCSPEGLTGTIRKQQ*
Ga0126379_1237036313300010366Tropical Forest SoilQPGQPTKGLLHSAALTSVERLHLDAARQRLVVEIDLPDPEFFSRPFERVAYEYSPTDLKIEPFNCTPEGVTGTVHK*
Ga0134127_1226823023300010399Terrestrial SoilVLEQYVEQQGRPTKGLLHSPALTTVERLHVDAERQRLVVEVDISDPEFFKQPIARMTMEYSPSDLKIEPFKCSREGLTGTIRNAEK*
Ga0137436_121320623300011423SoilVEQPGQPTKGLLHSAALTSVERLHLDAERQRLVVEIDLTDPEFFKQAVARSTNEYAPSALRIEPFKCSPEGVTGTIRK*
Ga0137458_105559813300011436SoilVIETGNYAAGVLNQYVEQPGQPTKGLLHSAALTSVERLHLDAARQRLVVEIDLADPEFFKQPFGRSTNEYAPSALKLEPFNCSPEGPTGTIRKSN*
Ga0150985_11116337913300012212Avena Fatua RhizosphereIETANYSAGVLNQYVEQPGLPTRGLLNSAALTSVERLSFDAARQRLVVEVELKDPEFFTRDFDVAHMEYAPSELTLEPFNCSPEGVTGTIAR*
Ga0150984_10679191723300012469Avena Fatua RhizosphereVLNQYVEQQGQSTKGLLHSAALTTVERLHLDAARQRLVVEVDMTDPEFFKQPFPRATMEYSASDLKIEPFKCSPEGPGGTIHSAGK*
Ga0157352_106374813300012519Unplanted SoilPTKGLLHSAALTSVERVHLDAARQRLIVEIDLTDPEYFKQPFPRSTNEYAASDLKIESFNCSPEGVTGTLKK*
Ga0157284_1001095023300012893SoilVEQPGQPTKGLLHSAALTSVERVHLDAARQRLVVEIDLVDPEFFKQPLARLTMEYSPSDLKIAPFKCSREGLTGTIRNPAK*
Ga0157282_1012062213300012904SoilETANYSKGVLNQYVEQPGQPTKGLLHSAALTSVEHVHLDAARQRLIVEIDLTDPEYFKQPFPRSTNEYAASDLKIEPFNCSPEGVTGTLKK*
Ga0157286_1027098213300012908SoilLLHSTALTTVERLRLDAARQRLVVEIDMTDPDFFKQAFPRATMEYAASDLKIEPFKCSPEGLTGSIKNNK*
Ga0157290_1015587423300012909SoilLNQYVEQPGQPTKGLLHSAALTSVERVHLDAARQRLIVEIDITDPEYFKQPFPRSTNEYAASDLKIEPFNCSPEGVTGTLKK*
Ga0157298_1001154913300012913SoilLNQYVEQPGQPTKGLLHSAALTSVEHVHLDAARQRLIVEIDLTDPEYFKQPFPRSTNEYAASDLKIEPFNCSPEGVTGTLKK*
Ga0157298_1035802223300012913SoilLNQYVEQPGQPTKGLLHSAALTSVERLHLDAARQRLVVEVDLSDPDFFKQAFPRSTNEYAPSALKIEPFKCSPEGVTGTIRKAS*
Ga0126375_1134846513300012948Tropical Forest SoilRMEGDALVIETANYSAGVLNQYVEQPGQPTKGLLHSAALTSVERLHLDAARQRLVVEVDLADPEFFNRPFDRTTYEYAPSALKMEKFNCSPEGVTGSLKK*
Ga0126369_1317256113300012971Tropical Forest SoilETGNYSAGVLEQYVEQQGQPTKGLLHSPALMTVERLHVDAERQRLVVDVDMTDPEFFKQPPRRLTMEYSPSDLKIEPFKCSPEGLTGTIRNTAK*
Ga0157378_1059117713300013297Miscanthus RhizosphereNYSAGVLNQYVETPGQPTKGLLHSAALTSVERLHLDGAGQRLVVEIDLKDPEYFTQAFNRSTNEYAPSDLKIEPFNCSREGLTGTLRK*
Ga0157378_1165368823300013297Miscanthus RhizosphereLNQYVEQPGQPTKGLLHSAALTSVERVHLDAARQRLIVEIDLTDPEYFKQPFPRSTNEYAASDLKIEPFNCSPEGVTGTLKK*
Ga0163162_1100331513300013306Switchgrass RhizospherePTKGLLHSAALTSVEHLHLDAARQRLVVEIDLTDTEFFKQPFPRTTMEYAASDLKIQPFKCSPEDKNGTIRNPGK*
Ga0157375_1079578233300013308Miscanthus RhizosphereVLNQYVEQPGQPTKGLLHSAALTSVEHLHLDAARQRLVVEIDLTDTEFFKQPFPRTTMEYAASDLKIQPFKCSPEDKNGTIRNPGK*
Ga0134079_1063395513300014166Grasslands SoilETANYSAGVLNQYVEQPGQSTKGLLHSAALTSIERLHVDAARQRLVVEIDLVDPEFFKQPFPRAATEYASSNLKIEPFNCSPEGVTGTLKK*
Ga0075353_119459823300014321Natural And Restored WetlandsTPGQPTKGLLHSAALTSVERIHLDAAGQRLVVEIDLVDNEFFKQQFQRSTTEYAPSDLKIEPFNCSREGLTGTLKKK*
Ga0075353_119629213300014321Natural And Restored WetlandsIETANYAAGVLNQYVEQPGQPTKGLLHSAALTSVERLHLDATRQRLVVEIDMSDPEFFTRAFDRVAYEYSPTDLAIVPFNCSPEGVTGTVRK*
Ga0163163_1243846113300014325Switchgrass RhizosphereAGVLEQYVEQRGQPTKGLLHSASLTTIERLHIDGARQRLIVDVDVTDPEFYKQPLTRMTMEYSPSDLKIAPFKCAREGLTGIIRNAPK*
Ga0157380_1209672013300014326Switchgrass RhizosphereYAPGVLNQYVEQPGQPTKGLLHSAALTTVERLHVDSARQRLVVEFDMTDPEFFKQPFPHASLEYSPSDLKIEPFKCSPEGLTGTIRNPGK*
Ga0157376_1090395823300014969Miscanthus RhizosphereETANYGAGVLNQYVEQQGQPTKGLLHSAALTTVERVHLDTARQRLVVDIDQTDPEFFKQAFPRGTLEYSASDLKIEPFKCSPEGLTGTARK*
Ga0173480_1084348113300015200SoilGVLEQYVERRGQPTKGLLHSAALTTVERLRVDVERQRLVVDGDVTDPEFFKQPLARLTMEYSPSDLKIAPFKCSREGLTGTIRNPAK*
Ga0132256_10112034223300015372Arabidopsis RhizosphereVEQPGQPTKGLLHSAALTSVERLHLDAARQRLVVEVDLSDPDFFKQAFPRSTNEYAPSALKIEPFKCSPEGVTGTIRKAS*
Ga0132257_10418503413300015373Arabidopsis RhizosphereTAIYSAGVLNQYVEQPGQPTKGLLHSAALTSVERLHLDAARQRLVVEVDLSDPDYFTRPFDRTTYEYAASALKIEPFNCSREGLTGTLKK*
Ga0132255_10391190923300015374Arabidopsis RhizospherePGQPTKGLLHSAALTSVERVHLDAARQRLVVEIDLVDPEFFKQPFPRSTNEYAPSNLKIEPFNCSPEGVTGTIRAARSK*
Ga0182033_1142241723300016319SoilQRQPTKGLLHSPALITVERLHVDAERQRLVVEVDMTDPEFFKQPPARMTMEYSPSDLKIEPFKCSPEGLTGTIRNAAK
Ga0182032_1134254113300016357SoilTKGLLHSAALTSVERLHVDSARQRLVVEIDLADPEFFNRPFDRATYEYAASDLTIQPFNCSPEGVNGALRK
Ga0184628_1007970023300018083Groundwater SedimentTANYSAGVLNQYVEQPGQPTKGLLHSAALTSVERLSFDAARQRLVVEIDLTDPEFFKQPFPRSRNEYAPSALKIEPFNCSPEGVTGTIKK
Ga0190271_1128200823300018481SoilEASSGRMLVSEPLVAGGLLHSASLTTVERLHVDPARQRLVVDVDITDPEFFKQPLARETMEYSPSDLKILPFKCSREGLTGTIRN
Ga0190264_1011106733300019377SoilNQYVEQPGQPTKGLLHSAALTTVERLHLDATRQRLVVEVDMTDPEFFKQPFPRATTEYAASDLKIEPFNCSPEGLTGTTRSARAR
Ga0210379_1036122313300021081Groundwater SedimentLNQYVEQPGQPTKGLLHSAALTSVERLHLDAERQRLVVEIDLTDPEFFKQAFARSTNEYAPSALKIEPFKCSPEGVTGTIRK
Ga0126371_1307453913300021560Tropical Forest SoilTKGLLHSPALMTVERLHVDAERQRLVVDVDMTDPEVFKQPPRRLTMEYSPSDLKIEPFKCSPEGLTGTIRNTAK
Ga0247752_107020013300023071SoilLQPTKGALHSASLTTIERLQLDRASQRLIVEVDVTDPQFYKQPLPRLTMEYSPSDLKITPFKCAREGPNGMIGKATK
Ga0209108_1052818313300025165SoilLLHSAELTSVERVSLDAERQRLVVEVWLKDPEFFTRDFDVARMEYAPSDVSIEPFNCSPEGVTGTIKQ
Ga0207680_1049769123300025903Switchgrass RhizosphereTKGALHSASLTTIERLQLDRASQRLIVEVDVTDPQFYKQPLPRLTMEYSPSDLKITPFKCAREGPNGMIGKATK
Ga0207663_1013415033300025916Corn, Switchgrass And Miscanthus RhizosphereVLNQYVETRGQPTKGLLHSAALTSVERVHLDAAAQRLVVEIDLADPEFFKQPFARSTSEYAPSELKIEPFNCSPEGVTGTVKKVATR
Ga0207646_1194154423300025922Corn, Switchgrass And Miscanthus RhizosphereGVLNQYVEQPAQPTKGLLHSAALTTVERLHVDTARQLLVVEVDMTDPEFFKQPFPRAATEYLPSDLKIEPFKCSPEGLTGTIRK
Ga0207659_1105863823300025926Miscanthus RhizosphereTANYSAGVLEQYVERRGQPTKGLLHSAALTTVERLRVDVESQRLVVDVDVTDPEFFKQPLARLTMEYSPSDLKIAPFKCSREGLTGTIRNPAK
Ga0207687_1045310513300025927Miscanthus RhizosphereEQPGQPTKGLLHSAALTTTERLHLDAARQRLVLEVDMTDPEFFKQPFPRGTNEYAPSNLKIEPFNCSPEGVTGTIKKKA
Ga0207686_1152075823300025934Miscanthus RhizosphereIETANYSAGVLEQYVERRGQPTKGLLHSAALTTIERLHVDSARQRLVVEVDVTDPEFFKQPLAPEVMEYSPSDLKLAPFKCAREGLTGTIRNGAE
Ga0207691_1049335723300025940Miscanthus RhizosphereMARADWGVLNQYVETPGQPTKGLLHSAALTSVERLHLDAARQRLVVEIDLADPEFFTQAFNRSTTEYAPTDLTVTPFNCSPEGVTGTIRK
Ga0207651_1080321923300025960Switchgrass RhizosphereAGVLNQYVEQPGQPTKGLLHSAALTSVERLHLDAARQRLVVEVDLSDPDFFKQAFPRSTNEYAPSALKIEPFKCSPEGVTGTIRKAS
Ga0207651_1203372223300025960Switchgrass RhizosphereKGLLHSASLTTVERLHVDPARQRLIVDVDITDPEFFKQPLARETMEYSPSDLKILPFKCSREGLTGTIRN
Ga0207677_1001180553300026023Miscanthus RhizosphereVLNQYVEQPGQPTKGLLHSAALTTVERLHLDAARQRLIVEIDMTDPEFFKQPFPRATMEYAASDLKIEPFKCSPEGPAGTIHSAGK
Ga0207677_1171062123300026023Miscanthus RhizosphereIETGNYSAGVLNQYVEQPGQPTKGLLHSAALTSVERLHLDAARQRLVVEVDLSDPDFFKQAFPRSTNEYAPSALKIEPFKCSPEGVTGTIRKAS
Ga0207708_1176012913300026075Corn, Switchgrass And Miscanthus RhizosphereGVLEQYVEQRGQPTKGLLHSASLTTVERLHVDSARQRLVVDVDITDPVFFKQPLPRETMEYSPSDLNIMPFKCSREGLTGTIRNAAKP
Ga0207676_1232547713300026095Switchgrass RhizosphereIETGNYSAGVLEQYVEQRLQPTKGALHSASLTTIERLQLDRASQRLIVEVDVTDPQFYKQPLPRLTMEYSPSDLKITPFKCAREGPNGMIGKATK
Ga0209814_1052339423300027873Populus RhizosphereSTGVLNQYVEQPGQPTKGLLHSAALTSVERLHLDPTRQRLVVEIDLADPEFFKQPFPRSTNEYAPSALKIEKFNCSPEGVTGTIRK
Ga0209382_1160502023300027909Populus RhizospherePGQPTKGLLHSAALTSVERLHLDAARQRLVVEIDLTDPEYFKQPFPRGTLEYAASDLKIEPFNCSPEGVTGTLRKN
Ga0247682_107885023300028146SoilVLEQYVERQGQPTTGLLHSAALTTIERLHVDAERQRLIVEVDITDPEFFKQPPGHMTMEYSPSGLKIEPFKCSPEGLTGTIRNAPK
Ga0247825_1120546813300028812SoilGLLHSAALTSVERLHLDAARQRLVVEVDLSDPEFFKQPFPRSTNEYAPSALKIEPFKCSPEGPTGTIRK
Ga0310887_1090462413300031547SoilVLNQYVEQPGQPTKGLLHSATLTSVERLHLDAERQRLVVEIDLTDPEFFKQAFARSTNEYAPSALKIEPFKCSPEGVTGTIRK
Ga0310813_1056940333300031716SoilVLNQYVEQPGQPTKGLLHSAALTTVERIHVDMARQRLVVESDLTDPEFFKQAFPRAATEYSPSDLKIEPFKCSPEGLTGSIRAGK
Ga0310904_1030407413300031854SoilTKGLLHSAALTSVERLHLDTARQRLVVEIDLTDPEYFKQPFPRSTNEYAASDLKIEPFNCSPEGVTGTLKK
Ga0310900_1012952613300031908SoilGNYSAGVLNQYVEQPGQPTKGLLHSAALTSVERLHLDAARQRLVVEVDLSDPDFFKQAFPRSTNEYAPSALKIEPFKCSPEGVTGTIRKAS
Ga0306921_1161117823300031912SoilYVEQAGQPTKGLLHSAALTSVERIHLDAARQRLVVEIEMTDPDFFTQPFSHATMEYAASDLKIEPFNCSPEGVTGTVRK
Ga0310901_1031125413300031940SoilQYVEQPGQPTKGLLHSAALTSVERLHLDTARQRLVVEIDLTDPEYFKQPFPRSTNEYAASDLKIEPFNCSPEGVTGTLKK
Ga0310897_1050055713300032003SoilVIETANYSAGVLEQYVERRGQPTKGLLHSAALTTVERLRVDVERQRLVVDVDVTDPEFFKQPLARLTMEYSPSDLKIAPFKCTREGLTGTIRNPAK
Ga0310902_1038201213300032012SoilGVLNQYVEQPGQPTKGLLHSAALTSVERLHLDAARQRLVVEVDLSDPDFFKQAFPRSTNEYAPSALKIEPFKCSPEGVTGTIRKAS
Ga0310890_1005251813300032075SoilTKGLLHSATLTSVERLHLDAERQRLVVEIDLTDPEFFKQAFARSTNEYAPSALKIEPFKCSPEGVTGTIRK
Ga0315281_1144038423300032163SedimentGVMNQYVEEAGQPTKGLLHSAALTSVERLHLDAARQRLVVEMDFVDNDFFKQPFPRATTEFAPSGVQIEPFNCSPEGLTGTTRK
Ga0307471_10088602013300032180Hardwood Forest SoilQKGQPTKGLLHSSALTSVERLHLDAARQRLVVEVDLADPEYFTRPFDRTTYEYAASALKIEPFNCSREGVTGTIRK
Ga0315271_1118998323300032256SedimentDTGNYAAGVMNQYVEEAGQLTKGLLHSAALTSVERLHLDAARQRLVVEMDFVDNDFFKQPFPRATTEFAPSGVQIEPFNCSPEGLTGTTRK
Ga0373959_0205266_1_2463300034820Rhizosphere SoilYVEQPGQPTKGLLHSASLTTVERIHVDAARQRLVVEVDMTDPEFFKQHFPRAAMEYSPSDLKIEPFKCSPEGLTGTIRAAK


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.