Metagenome / Metatranscriptome Family F048475

Basic Information
Family ID	F048475
Family Type	Metagenome / Metatranscriptome
Number of Sequences	148
Average Sequence Length	56 residues
Representative Sequence	MKRILMLVLLALALPMAAFANNSVDFTNSGGTLSGSSAGLSLTGSELIAVNGLN
Number of Associated Samples	128
Number of Associated Scaffolds	148

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	97.89 %
% of genes near scaffold ends (potentially truncated)	93.92 %
% of genes from short scaffolds (< 2000 bps)	87.16 %
Associated GOLD sequencing projects	121
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.37

Most Common Taxonomy
Group	Bacteria (54.054 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (13.514 % of family members)
Environment Ontology (ENVO)	Unclassified (24.324 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (62.838 % of family members)

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 21.95% β-sheet: 19.51% Coil/Unstructured: 58.54%
Feature Viewer

Powered by Feature Viewer

Pfam ID	Name	% Frequency in 148 Family Scaffolds
PF00027	cNMP_binding	12.84
PF02954	HTH_8	5.41
PF07589	PEP-CTERM	2.03
PF07238	PilZ	1.35
PF13320	DUF4091	0.68
PF09335	SNARE_assoc	0.68
PF13377	Peripla_BP_3	0.68
PF12681	Glyoxalase_2	0.68
PF00005	ABC_tran	0.68
PF14117	DUF4287	0.68
PF03626	COX4_pro	0.68

COG ID	Name	Functional Category	% Frequency in 148 Family Scaffolds
COG0398	Uncharacterized membrane protein YdjX, related to fungal oxalate transporter, TVP38/TMEM64 family	Function unknown [S]	0.68
COG0586	Membrane integrity protein DedA, putative transporter, DedA/Tvp38 family	Cell wall/membrane/envelope biogenesis [M]	0.68
COG1238	Uncharacterized membrane protein YqaA, VTT domain	Function unknown [S]	0.68
COG3125	Heme/copper-type cytochrome/quinol oxidase, subunit 4	Energy production and conversion [C]	0.68

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	54.05 %
Unclassified	root	N/A	45.95 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	54.05 %
Unclassified	root	N/A	45.95 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	54.05 %
Unclassified	root	N/A	45.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.95 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	27.70 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.03 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.95 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	9.46 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	1.35 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.95 %
Acidobacteria bacterium 13_1_20CM_4_56_7	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_20CM_4_56_7	4.73 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4.73 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	1.35 %
Chromatiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.95 %
Acidobacteria bacterium 13_1_20CM_4_56_7	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_20CM_4_56_7	4.73 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4.73 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1.35 %
Ectothiorhodospiraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Ectothiorhodospiraceae	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.95 %
Acidobacteria bacterium 13_1_20CM_4_56_7	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_20CM_4_56_7	4.73 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4.73 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1.35 %
Thioalkalivibrio	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Ectothiorhodospiraceae → Thioalkalivibrio	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.95 %
Acidobacteria bacterium 13_1_20CM_4_56_7	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_20CM_4_56_7	4.73 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4.73 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1.35 %
unclassified Thioalkalivibrio	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Ectothiorhodospiraceae → Thioalkalivibrio → unclassified Thioalkalivibrio	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.95 %
Acidobacteria bacterium 13_1_20CM_4_56_7	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_20CM_4_56_7	4.73 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4.73 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1.35 %
Thioalkalivibrio sp. ALE23	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Ectothiorhodospiraceae → Thioalkalivibrio → unclassified Thioalkalivibrio → Thioalkalivibrio sp. ALE23	0.68 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001593\|JGI12635J15846_10467604	Not Available	749	Open in IMG/M
3300002568\|C688J35102_118038462	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_20CM_4_56_7	524	Open in IMG/M
3300003367\|JGI26338J50219_1028931	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_20CM_4_56_7	503	Open in IMG/M
3300004091\|Ga0062387_100747156	All Organisms → cellular organisms → Bacteria	722	Open in IMG/M
3300004633\|Ga0066395_10846520	Not Available	551	Open in IMG/M
3300005167\|Ga0066672_10140326	All Organisms → cellular organisms → Bacteria	1509	Open in IMG/M
3300005174\|Ga0066680_10690315	Not Available	628	Open in IMG/M
3300005434\|Ga0070709_10230250	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1326	Open in IMG/M
3300005434\|Ga0070709_11539568	Not Available	540	Open in IMG/M
3300005526\|Ga0073909_10726944	Not Available	500	Open in IMG/M
3300005533\|Ga0070734_10555952	Not Available	654	Open in IMG/M
3300005541\|Ga0070733_10655070	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Ectothiorhodospiraceae → Thioalkalivibrio → unclassified Thioalkalivibrio → Thioalkalivibrio sp. ALE23	705	Open in IMG/M
3300005542\|Ga0070732_10373606	All Organisms → cellular organisms → Bacteria → Acidobacteria	859	Open in IMG/M
3300005560\|Ga0066670_10149015	All Organisms → cellular organisms → Bacteria → Acidobacteria	1365	Open in IMG/M
3300005564\|Ga0070664_100578919	All Organisms → cellular organisms → Bacteria → Acidobacteria	1040	Open in IMG/M
3300005564\|Ga0070664_102334754	Not Available	507	Open in IMG/M
3300005569\|Ga0066705_10246739	All Organisms → cellular organisms → Bacteria → Acidobacteria	1131	Open in IMG/M
3300005602\|Ga0070762_10324841	All Organisms → cellular organisms → Bacteria → Acidobacteria	975	Open in IMG/M
3300005602\|Ga0070762_10418475	Not Available	866	Open in IMG/M
3300005614\|Ga0068856_100153343	All Organisms → cellular organisms → Bacteria → Acidobacteria	2313	Open in IMG/M
3300005764\|Ga0066903_104451956	All Organisms → cellular organisms → Bacteria	748	Open in IMG/M
3300006086\|Ga0075019_10076622	All Organisms → cellular organisms → Bacteria	1901	Open in IMG/M
3300006162\|Ga0075030_101492174	Not Available	529	Open in IMG/M
3300006174\|Ga0075014_100358386	All Organisms → cellular organisms → Bacteria	784	Open in IMG/M
3300006175\|Ga0070712_100467553	All Organisms → cellular organisms → Bacteria	1052	Open in IMG/M
3300006176\|Ga0070765_102230873	Not Available	510	Open in IMG/M
3300006642\|Ga0075521_10236972	Not Available	871	Open in IMG/M
3300006804\|Ga0079221_10863834	Not Available	658	Open in IMG/M
3300006806\|Ga0079220_10894762	All Organisms → cellular organisms → Bacteria → Acidobacteria	688	Open in IMG/M
3300006806\|Ga0079220_11009912	Not Available	661	Open in IMG/M
3300006893\|Ga0073928_10418706	All Organisms → cellular organisms → Bacteria	976	Open in IMG/M
3300006954\|Ga0079219_11910288	All Organisms → cellular organisms → Bacteria	561	Open in IMG/M
3300009525\|Ga0116220_10313504	Not Available	692	Open in IMG/M
3300009551\|Ga0105238_11792581	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_20CM_4_56_7	646	Open in IMG/M
3300009621\|Ga0116116_1100998	Not Available	790	Open in IMG/M
3300009624\|Ga0116105_1020882	All Organisms → cellular organisms → Bacteria	1376	Open in IMG/M
3300009683\|Ga0116224_10435335	Not Available	624	Open in IMG/M
3300009784\|Ga0123357_11003414	Not Available	519	Open in IMG/M
3300009792\|Ga0126374_10301989	All Organisms → cellular organisms → Bacteria → Acidobacteria	1074	Open in IMG/M
3300010043\|Ga0126380_11420480	Not Available	610	Open in IMG/M
3300010048\|Ga0126373_10048322	All Organisms → cellular organisms → Bacteria	3771	Open in IMG/M
3300010048\|Ga0126373_11190920	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	828	Open in IMG/M
3300010048\|Ga0126373_12661266	Not Available	558	Open in IMG/M
3300010361\|Ga0126378_11281898	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	828	Open in IMG/M
3300010366\|Ga0126379_12023505	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	678	Open in IMG/M
3300010376\|Ga0126381_103934622	Not Available	579	Open in IMG/M
3300010376\|Ga0126381_104345097	Not Available	548	Open in IMG/M
3300010398\|Ga0126383_11135208	All Organisms → cellular organisms → Bacteria → Acidobacteria	871	Open in IMG/M
3300010398\|Ga0126383_12218638	Not Available	635	Open in IMG/M
3300011269\|Ga0137392_10165347	All Organisms → cellular organisms → Bacteria	1794	Open in IMG/M
3300011271\|Ga0137393_11237466	Not Available	633	Open in IMG/M
3300012096\|Ga0137389_10155489	All Organisms → cellular organisms → Bacteria	1875	Open in IMG/M
3300012207\|Ga0137381_10693278	All Organisms → cellular organisms → Bacteria → Acidobacteria	885	Open in IMG/M
3300012207\|Ga0137381_11763518	Not Available	509	Open in IMG/M
3300012208\|Ga0137376_10564862	Not Available	985	Open in IMG/M
3300012357\|Ga0137384_11339145	Not Available	563	Open in IMG/M
3300012359\|Ga0137385_11121465	Not Available	647	Open in IMG/M
3300012362\|Ga0137361_11698057	Not Available	551	Open in IMG/M
3300012505\|Ga0157339_1016414	Not Available	741	Open in IMG/M
3300012923\|Ga0137359_11258798	Not Available	628	Open in IMG/M
3300012948\|Ga0126375_11810609	Not Available	533	Open in IMG/M
3300012960\|Ga0164301_11498502	Not Available	555	Open in IMG/M
3300012985\|Ga0164308_11497492	Not Available	619	Open in IMG/M
3300012989\|Ga0164305_11451969	Not Available	606	Open in IMG/M
3300013307\|Ga0157372_10213192	All Organisms → cellular organisms → Bacteria	2238	Open in IMG/M
3300014199\|Ga0181535_10559883	Not Available	657	Open in IMG/M
3300014201\|Ga0181537_10095052	All Organisms → cellular organisms → Bacteria	2026	Open in IMG/M
3300015052\|Ga0137411_1340487	All Organisms → cellular organisms → Bacteria → Acidobacteria	5215	Open in IMG/M
3300015373\|Ga0132257_104424573	Not Available	511	Open in IMG/M
3300016270\|Ga0182036_11469652	Not Available	572	Open in IMG/M
3300016294\|Ga0182041_11751762	Not Available	575	Open in IMG/M
3300016422\|Ga0182039_10799314	All Organisms → cellular organisms → Bacteria → Acidobacteria	837	Open in IMG/M
3300016445\|Ga0182038_10664838	All Organisms → cellular organisms → Bacteria → Acidobacteria	904	Open in IMG/M
3300017942\|Ga0187808_10060955	All Organisms → cellular organisms → Bacteria → Acidobacteria	1609	Open in IMG/M
3300017970\|Ga0187783_11212295	Not Available	544	Open in IMG/M
3300017973\|Ga0187780_10087352	All Organisms → cellular organisms → Bacteria → Acidobacteria	2145	Open in IMG/M
3300017975\|Ga0187782_10358973	All Organisms → cellular organisms → Bacteria → Acidobacteria	1104	Open in IMG/M
3300017995\|Ga0187816_10303387	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_20CM_4_56_7	701	Open in IMG/M
3300018026\|Ga0187857_10184027	All Organisms → cellular organisms → Bacteria	980	Open in IMG/M
3300018085\|Ga0187772_10139268	All Organisms → cellular organisms → Bacteria → Acidobacteria	1596	Open in IMG/M
3300018085\|Ga0187772_10492506	Not Available	863	Open in IMG/M
3300020582\|Ga0210395_10029257	All Organisms → cellular organisms → Bacteria	4037	Open in IMG/M
3300020582\|Ga0210395_11223977	All Organisms → cellular organisms → Bacteria	551	Open in IMG/M
3300021170\|Ga0210400_10001118	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	27278	Open in IMG/M
3300021170\|Ga0210400_10018796	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	5411	Open in IMG/M
3300021170\|Ga0210400_10097841	All Organisms → cellular organisms → Bacteria	2321	Open in IMG/M
3300021180\|Ga0210396_11639046	Not Available	524	Open in IMG/M
3300021401\|Ga0210393_10203214	All Organisms → cellular organisms → Bacteria → Acidobacteria	1602	Open in IMG/M
3300021406\|Ga0210386_11488364	Not Available	565	Open in IMG/M
3300021433\|Ga0210391_11047048	All Organisms → cellular organisms → Bacteria	635	Open in IMG/M
3300021474\|Ga0210390_11654673	Not Available	502	Open in IMG/M
3300021477\|Ga0210398_10905251	Not Available	707	Open in IMG/M
3300021477\|Ga0210398_10931570	All Organisms → cellular organisms → Bacteria	695	Open in IMG/M
3300021479\|Ga0210410_10260032	All Organisms → cellular organisms → Bacteria	1557	Open in IMG/M
3300021479\|Ga0210410_10605051	All Organisms → cellular organisms → Bacteria → Proteobacteria	973	Open in IMG/M
3300021479\|Ga0210410_11665594	All Organisms → cellular organisms → Bacteria	531	Open in IMG/M
3300022523\|Ga0242663_1104859	Not Available	568	Open in IMG/M
3300022525\|Ga0242656_1137632	Not Available	507	Open in IMG/M
3300024271\|Ga0224564_1026522	All Organisms → cellular organisms → Bacteria	1073	Open in IMG/M
3300025924\|Ga0207694_11555094	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_20CM_4_56_7	558	Open in IMG/M
3300025928\|Ga0207700_11158963	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	690	Open in IMG/M
3300026301\|Ga0209238_1205445	Not Available	578	Open in IMG/M
3300026308\|Ga0209265_1034256	All Organisms → cellular organisms → Bacteria	1571	Open in IMG/M
3300026333\|Ga0209158_1283755	Not Available	569	Open in IMG/M
3300027168\|Ga0208239_1001369	All Organisms → cellular organisms → Bacteria → Acidobacteria	1697	Open in IMG/M
3300027516\|Ga0207761_1042895	All Organisms → cellular organisms → Bacteria	884	Open in IMG/M
3300027575\|Ga0209525_1065231	All Organisms → cellular organisms → Bacteria → Proteobacteria	879	Open in IMG/M
3300027674\|Ga0209118_1052853	All Organisms → cellular organisms → Bacteria	1198	Open in IMG/M
3300027674\|Ga0209118_1107667	Not Available	784	Open in IMG/M
3300027727\|Ga0209328_10136510	All Organisms → cellular organisms → Bacteria	748	Open in IMG/M
3300027737\|Ga0209038_10022970	All Organisms → cellular organisms → Bacteria → Acidobacteria	1839	Open in IMG/M
3300027826\|Ga0209060_10468780	Not Available	572	Open in IMG/M
3300027842\|Ga0209580_10495150	Not Available	608	Open in IMG/M
3300027867\|Ga0209167_10115424	All Organisms → cellular organisms → Bacteria	1386	Open in IMG/M
3300027875\|Ga0209283_10164077	All Organisms → cellular organisms → Bacteria	1474	Open in IMG/M
3300027875\|Ga0209283_10598313	Not Available	699	Open in IMG/M
3300027879\|Ga0209169_10690777	Not Available	529	Open in IMG/M
3300027898\|Ga0209067_10349936	Not Available	820	Open in IMG/M
3300027911\|Ga0209698_11101545	Not Available	589	Open in IMG/M
3300028047\|Ga0209526_10624777	Not Available	687	Open in IMG/M
3300028798\|Ga0302222_10243859	Not Available	701	Open in IMG/M
3300029889\|Ga0246001_1063973	Not Available	745	Open in IMG/M
3300029998\|Ga0302271_10297297	Not Available	705	Open in IMG/M
3300030494\|Ga0310037_10190853	All Organisms → cellular organisms → Bacteria → Acidobacteria	912	Open in IMG/M
3300030596\|Ga0210278_1152705	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	569	Open in IMG/M
3300031231\|Ga0170824_101350092	All Organisms → cellular organisms → Bacteria	565	Open in IMG/M
3300031236\|Ga0302324_100162409	All Organisms → cellular organisms → Bacteria	3638	Open in IMG/M
3300031239\|Ga0265328_10178980	Not Available	802	Open in IMG/M
3300031344\|Ga0265316_10122603	All Organisms → cellular organisms → Bacteria → Acidobacteria	1962	Open in IMG/M
3300031524\|Ga0302320_11103951	All Organisms → cellular organisms → Bacteria	826	Open in IMG/M
3300031708\|Ga0310686_109797791	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_20CM_4_56_7	809	Open in IMG/M
3300031808\|Ga0316037_111041	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_20CM_4_56_7	626	Open in IMG/M
3300031890\|Ga0306925_11217433	All Organisms → cellular organisms → Bacteria → Acidobacteria	753	Open in IMG/M
3300032160\|Ga0311301_11639566	All Organisms → cellular organisms → Bacteria → Acidobacteria	779	Open in IMG/M
3300032261\|Ga0306920_103533517	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	577	Open in IMG/M
3300032515\|Ga0348332_14201536	All Organisms → cellular organisms → Bacteria	2547	Open in IMG/M
3300032782\|Ga0335082_10700893	Not Available	874	Open in IMG/M
3300032783\|Ga0335079_10001752	All Organisms → cellular organisms → Bacteria	24788	Open in IMG/M
3300032805\|Ga0335078_10396955	All Organisms → cellular organisms → Bacteria	1812	Open in IMG/M
3300032828\|Ga0335080_11595199	Not Available	643	Open in IMG/M
3300033289\|Ga0310914_10401712	All Organisms → cellular organisms → Bacteria → Acidobacteria	1240	Open in IMG/M
3300033829\|Ga0334854_046492	All Organisms → cellular organisms → Bacteria	1039	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	92.57%
Host-Associated	Host-Associated	7.43%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	80.41%
Aquatic	Environmental → Aquatic	12.16%
Plants	Host-Associated → Plants	6.76%
Arthropoda	Host-Associated → Arthropoda	0.68%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	75.68%
Freshwater	Environmental → Aquatic → Freshwater	7.43%
Rhizosphere	Host-Associated → Plants → Rhizosphere	4.73%
Sediment	Environmental → Aquatic → Sediment	4.05%
Peat	Environmental → Terrestrial → Peat	4.05%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.03%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.68%
Plant Litter	Environmental → Terrestrial → Plant Litter	0.68%
Digestive System	Host-Associated → Arthropoda → Digestive System	0.68%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	56.08%
Loam	Environmental → Terrestrial → Soil → Loam	13.51%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	7.43%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	6.08%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	4.05%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	4.05%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.70%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.03%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.35%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.68%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	0.68%
Gut	Host-Associated → Arthropoda → Digestive System → Gut	0.68%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.68%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	29.05%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	18.24%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	10.14%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	6.08%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	5.41%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	4.05%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	4.05%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	4.05%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.70%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.70%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.70%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	2.03%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.03%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	1.35%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.35%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	0.68%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.68%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.68%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	0.68%
Unclassified	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified	0.68%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.68%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	13.51%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	8.78%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	8.78%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	4.73%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	4.73%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	4.73%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	4.05%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.05%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	4.05%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	3.38%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	3.38%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	2.70%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	2.70%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	2.70%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.70%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	2.03%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	2.03%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.03%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	1.35%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	1.35%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	1.35%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	1.35%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.35%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	1.35%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.35%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	0.68%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	0.68%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	0.68%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.68%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.68%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.68%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	0.68%
Peat	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat	0.68%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.68%
Termite Gut	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified → Termite Gut	0.68%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.68%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.68%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	0.68%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.68%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300003367	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM3	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005526	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1	Environmental	Open in IMG/M
3300005533	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1	Environmental	Open in IMG/M
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119	Environmental	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006041	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014	Environmental	Open in IMG/M
3300006086	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013	Environmental	Open in IMG/M
3300006162	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012	Environmental	Open in IMG/M
3300006174	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006642	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-D	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300009525	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_7_NC metaG	Environmental	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300009621	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_150	Environmental	Open in IMG/M
3300009623	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_10	Environmental	Open in IMG/M
3300009624	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_10	Environmental	Open in IMG/M
3300009683	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_b_LC metaG	Environmental	Open in IMG/M
3300009784	Embiratermes neotenicus P4 segment gut microbial communities from Petit-Saut dam, French Guiana - Emb289 P4	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012505	Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.10.yng.090610	Host-Associated	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300014199	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_30_metaG	Environmental	Open in IMG/M
3300014201	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_10_metaG	Environmental	Open in IMG/M
3300015052	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017942	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_3	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017973	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MG	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300017995	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_1	Environmental	Open in IMG/M
3300018026	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_100	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300022523	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-17-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022525	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-4-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300024271	Soil microbial communities from Bohemian Forest, Czech Republic ? CSU5	Environmental	Open in IMG/M
3300025924	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026308	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103 (SPAdes)	Environmental	Open in IMG/M
3300026309	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110 (SPAdes)	Environmental	Open in IMG/M
3300026333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140 (SPAdes)	Environmental	Open in IMG/M
3300027168	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF037 (SPAdes)	Environmental	Open in IMG/M
3300027516	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 34 (SPAdes)	Environmental	Open in IMG/M
3300027575	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O1 (SPAdes)	Environmental	Open in IMG/M
3300027674	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M1 (SPAdes)	Environmental	Open in IMG/M
3300027727	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027737	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027826	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027842	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027867	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027879	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4 (SPAdes)	Environmental	Open in IMG/M
3300027898	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013 (SPAdes)	Environmental	Open in IMG/M
3300027911	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028798	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E2_2	Environmental	Open in IMG/M
3300029889	Peat microbial communities from Marcell Experimental Forest bog in Minnesota, USA - MG_T3F_30cm	Environmental	Open in IMG/M
3300029998	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_N1_1	Environmental	Open in IMG/M
3300030494	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG (v2)	Environmental	Open in IMG/M
3300030596	Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO135-VCO085SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031236	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1	Environmental	Open in IMG/M
3300031239	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG	Host-Associated	Open in IMG/M
3300031344	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG	Host-Associated	Open in IMG/M
3300031524	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_3	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031808	Spruce litter microbial communities from Bohemian Forest, Czech Republic ? CLE3 metaT (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032515	FICUS49499 Metatranscriptome Czech Republic combined assembly (additional data)	Environmental	Open in IMG/M
3300032782	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033829	Peat soil microbial communities from Stordalen Mire, Sweden - 715 P2 1-5	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12635J15846_104676042	3300001593	Forest Soil	MKRMALLALLALALPLAAFANSIDATNSGGTLAGSTGGMTLSGSLLIAVNGLNGLG
C688J35102_1180384621	3300002568	Soil	MKRILWVVLLASLALPLAAFADNSVDFTNSGGTLSGGSGGLTLSGSTLIAINGMNGLQTGIN
JGI26338J50219_10289312	3300003367	Bog Forest Soil	VKTIMQRITLMALLALALPLAAFADNSVDFTNSGGTLSGTSAGLSLSGSEL
Ga0062387_1007471561	3300004091	Bog Forest Soil	MKRIMMLVLLALALPMVAFANDSVDFTNSGGTLSGSSAGLSLSGSELIAVNGLNGLGLVTGDLG
Ga0066395_108465201	3300004633	Tropical Forest Soil	MKRFALLFLLALALPMAAFANNSVDFTNAGGTLSGSSAGLTLTGSTLIAQGSNGGMITGDLGT
Ga0066672_101403263	3300005167	Soil	MKRILWVVLLATLALPLAAFADNSIDFTNSGGTLSGGTSGLTLSNSALIAINGMNGLQTGSNL
Ga0066680_106903151	3300005174	Soil	MKRIVLMALLALALPLSAFASSSVDFGNNGGALSGSSAGLTLSGSTLIAVSGLNG
Ga0070709_102302502	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MKRMLWLALIALALPMAAFANSGGVNFTNSGGTLTGSSAGMSLSGSVLIAVN
Ga0070709_115395681	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MKRMMLLFLLALALPMAAFANNSVDFTNAGGTLSGSSAGMSLSGSTLIA
Ga0073909_107269441	3300005526	Surface Soil	MKRMLWLALIALALPMAAFANSGGVDFTNSGGTLTGSSAGMSLSGSVLIAVNGLNGS
Ga0070734_105559521	3300005533	Surface Soil	MKRMFWLLLITLALPMGAFANSIGFTNSTGTLSGSSAGLSLTGSTLIAI
Ga0070733_106550701	3300005541	Surface Soil	MKRMLLMVLLALALPMAAFASSGVDFTNSGGTLSGSSEGLSLSGSELIAVNGLNGMGLVTGDLGS
Ga0070732_103736062	3300005542	Surface Soil	MKRILWLVLLVMALPLAAFASNQVDFTNSGGTLSGGSSGLSLSGSTLIAVNGFDSLGLVTGNLGS
Ga0066670_101490152	3300005560	Soil	MKRILWVVLLASLALPLAAFADNSVDFTNSGGTLSGGSGGLTLSGSTLIAINGMNGLQTGINLG
Ga0070664_1005789191	3300005564	Corn Rhizosphere	MKRILWVVLLASLALPLAAFADNSVDFTNSGGTLSGGTGGLTLSGSTLIAING
Ga0070664_1023347541	3300005564	Corn Rhizosphere	MEVAALGFTGQEESMKRVLLLALLALALPMAAFASSGVDFTNSGGTLVGTNSGFSLSGSTLIAVNGLNGGGL
Ga0066705_102467391	3300005569	Soil	MKRMMLLFLLALALPMAAFANNSVDFTNAGGTLSGSSAGMSLSGSTLIAFGSGGVIT
Ga0070762_103248411	3300005602	Soil	MKRLVVMALLALALPLAAFDSNSVDFTNLGGTLSGSNAGLSLSGSSLIAVNGLSGL
Ga0070762_104184752	3300005602	Soil	MKRMLWLSLLALALPMAAFAKDSVDFTNSGGTLAGSTLGLSLSGSELIAVNGLNGLGLVTGNL
Ga0068856_1001533431	3300005614	Corn Rhizosphere	MKRILWVVLLASLALPLAAFADNSVDFTNSGGTLSGGTGGLTLSGSTLI
Ga0066903_1044519561	3300005764	Tropical Forest Soil	MKRILWLLLLSLALPMAGFASSVDFTNSQGTLSGTDAGLSLTGSSLIAVNGLA
Ga0075023_1003406301	3300006041	Watersheds	MRRVALLILLALALPMAAFANSSIDFTNSGGTLAGTSSGMTLTNSTLIAVN
Ga0075019_100766221	3300006086	Watersheds	MKRTLLLALLALALPMSVFASSNSVDFTNSGGTLTGSSSGLSLSGSTLIAVNGLNGLG
Ga0075030_1014921741	3300006162	Watersheds	MKRILWMVLLTLALPMAAFASNSVDFTNSGGTLSGSSAGLTLSGSELVAVNGLSGMGLV
Ga0075014_1003583861	3300006174	Watersheds	MKRMFLLALLALALPMAAFATNSIDFTNSGGTLTGSSAGLTLSGSTLIAVNGLDGLGLVT
Ga0070712_1004675531	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MKRILWVVLLATLALPLAAFADNSVDFTNSGGTLSGGSGGLTLSGSTLIAINGMNGLQTGANLGTLS
Ga0070765_1008050181	3300006176	Soil	MKRIVLLALLALALPIAAFAGNVDFTNNSGTLSGSSAGLTLSGSELTAVTGLGGM
Ga0070765_1022308731	3300006176	Soil	MKRVLWVALLALTLPMAAFASSGGSIDFTNSGGTLSGSSSGLSLSGSVLIAVNGLNGMP
Ga0075521_102369721	3300006642	Arctic Peat Soil	MKRMLWVVLIALALPMAAFANSGGVDFTNSGGTLTGSSAGMSLGGSVLIAVNG
Ga0079221_108638341	3300006804	Agricultural Soil	MKRMLWLLLLALALPVAGFATSVDFTNSAGTLSGSNAGLSLSGSTLIAINGPGGLL
Ga0079220_108947622	3300006806	Agricultural Soil	MKRILWVVLLATLALPLAAFADSSIDFTNAGGTLSGGSAGLTLSDSTLI
Ga0079220_110099121	3300006806	Agricultural Soil	MRRVVLLVLLALVLPVAAFASSGVDFTNSGGTLTGSNSGMVLSGSTLIAVNGLN
Ga0073928_104187061	3300006893	Iron-Sulfur Acid Spring	MKRMVLMALLAMALPLAAFAGSVDFTNSAGVLSGSSAGLTLGSSELIAVNGLNGLGL
Ga0079219_119102881	3300006954	Agricultural Soil	MQRSLLLVLLALALPMAAFASSSVDFTNSSGTLSGTSAGLSLSGSELIAVNGLDGLGLVT
Ga0116220_103135041	3300009525	Peatlands Soil	MKRIVFIALLALALPLAAFANNSVDFTNSGGVLSGSSAGLSLTGSELIAVNGLNGL
Ga0105238_117925812	3300009551	Corn Rhizosphere	MKRILWVVLLATLALPLAAFADNSIDFTNSGGTLSGDSSGLTLSNSVLIAINGLNGL
Ga0116116_11009981	3300009621	Peatland	MKRIVLMAVLALALPLAAFANSVDFTNGGGLLKGSSAGLTLSSTLIAVNGLDGLGLVTGNNL
Ga0116133_10682772	3300009623	Peatland	MKRIVVLALLALTLPVAAFADQIDFTNHGGSLSGSSAGLTLTGSELTSIDILGG
Ga0116105_10208823	3300009624	Peatland	MKRIVLLALLAMALPLAAFADNSVDFTNSGGTLSGSSAWLSLTGSELIAVNGLGGG
Ga0116224_104353352	3300009683	Peatlands Soil	MKKILWIAMLALALPMVAFASTPSPVDFTNSGGTLSGSSDGLTLSGSELIAVNGLNGMGL
Ga0123357_110034141	3300009784	Termite Gut	MKSAWCLLLLALILPVAAFANSSTDFSNSGGTLSGSSAGLTLTGSTLIAVNDF
Ga0126374_103019891	3300009792	Tropical Forest Soil	MKRFALLFLLALALPMAAFANNSVDFTNAGGTLSGSSAGLTLTGSTLIAQGSSGG
Ga0126380_114204801	3300010043	Tropical Forest Soil	MKRVLLLALLALALPMAAFASSGVDFTNSGGTLVGTNSGFSLSGSTLIAVNGLNGGGL
Ga0126373_100483225	3300010048	Tropical Forest Soil	MRRVILLTLLALALPIAAFGSSSVDFTNSGGTLTGTNSGFSLANSTLVAVNGFNGGGLIT
Ga0126373_105966262	3300010048	Tropical Forest Soil	MKRVLFWFLLLTLALPTAAFANSIDFSNLGGTLSGSNLGLSLVGSTLKVA
Ga0126373_111909202	3300010048	Tropical Forest Soil	MKRMLLMALLALALPMTAFAGSSVDFTNSGGTLSGSSAGLSLSGSELIAVNGLNGWA*
Ga0126373_126612661	3300010048	Tropical Forest Soil	MRRVILLTLLALTLPIAAFGSSSVDFTNSGGTLTGTNSGFSLANSTLVAVNGFNGGGLIT
Ga0126378_112818981	3300010361	Tropical Forest Soil	MQRMFWLLLLALALPTVAFANSVDFTNSGGTLSGNNAGLSLSGSTLIAVNGLDG
Ga0126379_120235051	3300010366	Tropical Forest Soil	MKCTLWLLLVTLALPLAAFANSSVDFTNSSGTLTGSSAGLSVGDSTLIAVNGL
Ga0126381_1039346221	3300010376	Tropical Forest Soil	MKRIVLLFLLALALPMAAFAHNSVDFTNAGGTLSGSSAGMSLSGSTLIAMGI
Ga0126381_1043450971	3300010376	Tropical Forest Soil	MKRMFLLLLFALALPIAAFANSSEDFTNESGTLSGTTAGLSLTGSELVAVGDGIH
Ga0126383_111352081	3300010398	Tropical Forest Soil	MVLLFLLALALPMAAFANNSFDFTNAGGTLSGSSAGLTLSGSTLIAFGSGGMPITGNLGS
Ga0126383_122186382	3300010398	Tropical Forest Soil	MKRMFWLILAVALALPVTALANSVDFTNSGATLSGSNAGFTLSNSTLIEVNGL
Ga0137392_101653471	3300011269	Vadose Zone Soil	MKRVLLLTVLALALPLTAFADSVDFTNSGGILAGCSDGLSLTGSALIAVKGLNGLGLVTGSDL
Ga0137393_112374661	3300011271	Vadose Zone Soil	MKRLLWVALLALALPMVAFASSSVDFTNSGGTLSGTTAGLTLSSSELIAVNGL
Ga0137389_101554895	3300012096	Vadose Zone Soil	MKRIVLMALLALALPLAAFAGSSVDFTNGAGLLSGSTAGLSLSGSPLIAVSGLNGMGLVTGNLGSL
Ga0137381_106932782	3300012207	Vadose Zone Soil	MKRIVLMALLALALPMAAFASSSVDFTNSGGTLTGTSAGMSLSGSELIA
Ga0137381_117635181	3300012207	Vadose Zone Soil	MKRMFWMVLLALALPMAAFANNSVDFTNSGGTLSGSSAGLTLSGSELI
Ga0137376_105648622	3300012208	Vadose Zone Soil	MKRMMLLFLLALALPMAAFANNSVDFTNAGGTLSGSSAGMSLSGSTLIAFGSGG
Ga0137384_113391451	3300012357	Vadose Zone Soil	MKRILWVALLALALPMAAFATSSVDFTNSGGTLTGSSGGMSLTGSELIAV
Ga0137385_111214651	3300012359	Vadose Zone Soil	MKRIVLMALLALALPMAAFASSSVDFTNSGGTLTGTSAGMSLSGSELIAVNG
Ga0137361_116980571	3300012362	Vadose Zone Soil	MLWMVLLALALPMAAFANNSVDFTNSGGTLSGSSAGLTLSGSELIAVNGLNGL
Ga0157339_10164142	3300012505	Arabidopsis Rhizosphere	MLLLFLLALALPMAAFANNSVDFTNASGTLSGSSAGMSLSGSMLIAMG
Ga0137359_112587981	3300012923	Vadose Zone Soil	MKRIVLMALLALALPLAAFATSQVDFTNSGGTLSGSSAGMSLSGSTLVAVNGLSAG
Ga0126375_118106091	3300012948	Tropical Forest Soil	MQRMFWLLLLALALPTVAFANSVDFTNSGGTLSGNNAGLSLSGSTLIAVNGLDGLGLVTGNLGSVTF
Ga0164301_114985021	3300012960	Soil	MKRMLLLVLLALALPMAAFANNSVDFTNSGGTLSGSSAGLSLSGSTLIAMGGSGGLI
Ga0164308_114974922	3300012985	Soil	MKIVLWLLLCLALPVAASANSVDFTNSGGTLSGSTAGLSLSGSTFIAIN
Ga0164305_114519691	3300012989	Soil	MKIVLRLLLCLALPVAASANSVDFTNSGGTLSGSTAGLSLSGSTFIAINAGTLLTGDL
Ga0157372_102131921	3300013307	Corn Rhizosphere	MKRILWVVLLATLALPLAAFADQNVDFTNSGGTLSGDNSGLTLTDSALIVIKGINGTQTGTNLGTLA
Ga0181535_105598832	3300014199	Bog	MKRMVLMVLLALALPMAAFASSSVDFTNSGGTLSGSSEGLTLSGSALIAVNAPGTLGLI
Ga0181537_100950523	3300014201	Bog	MKRMIWLLLLTLALPMAAFANNNTDFTNSGGTLTGSTAGLSLTGSELIAVNGFNGMGLMTGDLGSV
Ga0137411_134048711	3300015052	Vadose Zone Soil	VLLAVLALALPMAAFASSSVDFSNSGGTLSGTNAGLALTGSTLIAVNGLNGGD*
Ga0132257_1044245731	3300015373	Arabidopsis Rhizosphere	MKRMFLLSLLALALPMAAFATNSVDFTNAGGTLSGSSAGLSLTGST
Ga0182036_114696522	3300016270	Soil	MKRMVLLFLLALALPMAAFASNSFDFTNAGGTLSGSSAGLTLTGSTLIAMGNGGMPI
Ga0182041_117517621	3300016294	Soil	MKRIVLLFLLALALPMAAFASNSFDFTNAGGTLSGSSAGLTLTGSTLIAMGNGGMPITGNLGTLT
Ga0182039_107993142	3300016422	Soil	MKRIFLLGLLALALPLAASASSVDFTNGGGTLSGSNSGLSLSGSTLIAVNGLGGMGIVTG
Ga0182038_106648381	3300016445	Soil	MKRIFLLGLLALALPLAASASSVDFTNGGGTLSGSNSGLSLSGSTLIAVNGLG
Ga0187808_100609551	3300017942	Freshwater Sediment	VDGSAGLALLMAAFANSSIDFTNRGGTLHGSKAGLSLSGSELIVVNGLNGLGLVTGTWAV
Ga0187783_112122951	3300017970	Tropical Peatland	MKRMIWLLLLTLALPIAAFASSTDFTNSGGKLTGSSSGLSLTGSELIAINGLGVG
Ga0187780_100873521	3300017973	Tropical Peatland	MNRILWLVLLTLALPMAAFADSSVDFTNSGGTLSGSSDGMSLSGSNLIAVR
Ga0187782_103589732	3300017975	Tropical Peatland	MKRILLMALLALALPISAFAIKSVDFTNSGGTLSGSSTGLSLSGSELIAV
Ga0187816_103033871	3300017995	Freshwater Sediment	MKRIFWLLLLTLALPMAAFANNSVDFTNSGGTLSGGTDGLTLSGSTLIA
Ga0187857_101840272	3300018026	Peatland	MKRIVLLALIAMALPLAAFADNSVDFTNSGGTLSGSSAGLSLTGSELIAVNGLGGGGLTTGSL
Ga0187772_101392681	3300018085	Tropical Peatland	MKRILLMALLALALPISAFATKSVDFTNSGGTLSGTSSGLSLSGSELIAVNGLNGMGL
Ga0187772_104925061	3300018085	Tropical Peatland	MKRILLMALLALALPISAFATKSVDFTNSGGTLSGSSTGLSLSGSELIAV
Ga0210395_100292575	3300020582	Soil	MKRTLMLAILALALPMAAFANNSIDFTNSGGTLSGSSAGLSLTGSELIAVNGLN
Ga0210395_112239772	3300020582	Soil	MKRIILLALLALALPFAAFADTSVDFTNYHGTLTGSNAGLSLNGSELIAVSGLNGMGLIEGA
Ga0210400_100011181	3300021170	Soil	MKRILILVLLALALPMAAFANNSIDFTNSGGTLSGSSAGLSLTGS
Ga0210400_100187967	3300021170	Soil	MKRMILLFLLALALPMAAFANNSVDFTNSGGSLSGTNSGLTLTGSALIAANGLGGGLITGNLG
Ga0210400_100978411	3300021170	Soil	MKRILMLVLLALALPMAAFANNSIDFTNSGGTLSGSSAGLSLSGSTLIAVNGLNGL
Ga0210396_116390461	3300021180	Soil	MKRIVLMALLALALPMAAFAGAVDFSNAGGTLTGSSSGLVLTGSTLIGVDGFNGMGQIAGTLG
Ga0210393_102032141	3300021401	Soil	MKRILWIALLALALPMAAFASSSSEVDFTNSGGTLSGTSAGLSLSGSELIAVNGLNGLGLVTG
Ga0210386_114883641	3300021406	Soil	MKRILILVLLALALPMAAFANNSIDFTNSGGTLSGSSAGLSLTGSELIAVNGLN
Ga0210384_113742761	3300021432	Soil	MKRVLWLTVLALALPLTAFADSVDFTNSGGILAGCSNGLSLTGSALIAVNGLNGSG
Ga0210391_110470482	3300021433	Soil	MKRTLMLAILALALPMAAFANNSVDFTNSGGTLSGSSAGLSLTGSELIAVNGLNGLGLVT
Ga0210390_116546731	3300021474	Soil	MKRILMLVLLALALPMAAFANNSVDFTNSGGTLSGSSAGLSLTGSELIAVNGLN
Ga0210398_109052511	3300021477	Soil	MKRILWLVLLALALPMAAFANNSVDFTNSGGTLSGSSAGLTLSGSELIAVNGLGSLGLVTGDLGSL
Ga0210398_109315701	3300021477	Soil	MKRIVLMALLVMALSMAAFASDSVDFTNSGGVLSGSSAGMSLTGSELIAVNGLNGMGLITGG
Ga0210410_102600321	3300021479	Soil	MKRVLWLTVLALALPLTAFADSVDFTNSGGILAGCSNGLSLTGSALIAVNGLNGSGLVTG
Ga0210410_106050512	3300021479	Soil	MKRMVLMALLVMALPLAVFASSGAVDFTNSSGVLSGTNAGLSLGSSELIAANGLNGLGLV
Ga0210410_116655941	3300021479	Soil	MKRTLMLAILALALPMAAFANNSIDFTNSGGTLSGSSAGLSLTG
Ga0242663_11048592	3300022523	Soil	MKRMILLFLLALALPMAAFANNSVDFTNAGGTLSGSSAGLNLTGSTLIAFGSGGTI
Ga0242656_11376321	3300022525	Soil	MKRIVLMALLAMALPLAAFASSSVDFTNSGGVLSGTSAGMSLSGSELIAINGLNGGGLITGGL
Ga0224564_10265222	3300024271	Soil	MKRMVLMALLALTLPLAAFADNSVDFTNSGGMLSGSSAGLTLGSSELIAVNGFGGGGLITGAL
Ga0207694_115550942	3300025924	Corn Rhizosphere	MKRILWVVLLATLALPLAAFADNSIDFTNSGGTLSGDSSGLTLSNSVLI
Ga0207700_111589631	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MKRMLWLALIALALPMAAFANSGGVDFTNSGGTLTGSSAGMSLSGSVLIAVNGLNGSGLVTGNDL
Ga0209238_12054451	3300026301	Grasslands Soil	MKRILWMALLALALPLAAFATNSVDFTNSGGTLSGSSAGMTLSSSTLIAVNGLNGLGLVTGNDLGNI
Ga0209265_10342563	3300026308	Soil	MKRILWVVLLASLALPLAAFADNSVDFTNSGGTLSGGSGGLTLSGSTLIAINGMNGLQTGSNL
Ga0209055_12387142	3300026309	Soil	MRRIMLLAVLALALPMAAFASSSVDFSNSGGTLTGTSAGLSLTGSTLIGV
Ga0209158_12837552	3300026333	Soil	MKRIYWLLLLTLALSVSGFANSVDFTNSGGTLSGSNAGLSLSSSTLI
Ga0208239_10013694	3300027168	Forest Soil	MKRVLWMVLLALALPISAFANNSVDFTNSGGTLSGSTAGLSLTGSELVAVDGLNGMGLVT
Ga0207761_10428953	3300027516	Tropical Forest Soil	MKSMLWLFLLALAVPTVAHASSSADFSNSGGTLAGSNSGLSLSGSTLVAVNGLSGLGLV
Ga0209525_10652311	3300027575	Forest Soil	MKRMVLMALLAMALPLAAVAGSVDFTNSTGVLSGSSAGLSLSGSELIAVNGLNGLGL
Ga0209118_10528532	3300027674	Forest Soil	MKRVLWLTVLALALPLTAFGDSVDFTNSGGILAGCSNGLSLTGSALIAVNGLNGMGLVT
Ga0209118_11076671	3300027674	Forest Soil	MRRVILMALLALALPVASFASSVDFTNSGGTLSGSSSGLTLTGSELIAVKGLGGGGLV
Ga0209328_101365102	3300027727	Forest Soil	MKRVLWLTVLALALPLTAFANSVDFTNSGGILAGSNSGLSLTGSALIAVNGLNGLGLVTG
Ga0209038_100229701	3300027737	Bog Forest Soil	VKTIMQRITLMALLALALPLAAFADNSVDFTNSGGTLSGTSAGLSLSGSELIVVT
Ga0209060_104687801	3300027826	Surface Soil	MKRIFWLLLLTLALPMAAFANNSVDFTNSGGTLSGSSDGLSLSGSTLIAVNGLAGLGLVTGSNLGG
Ga0209580_104951502	3300027842	Surface Soil	MKRILWMVMLALALPMTAFATSSVDFTNSGGVLTGSTAGLSLTGSEL
Ga0209167_101154241	3300027867	Surface Soil	MKRMLLMVLLALALPMAAFASSGVDFTNSGGTLSGSSEGLSLSGSELIAVNGLN
Ga0209283_101640771	3300027875	Vadose Zone Soil	MKRIVLMALLALALPLAAFAGSSVDFTNGAGLLSGSTAGLSLSGSPLIAVSGLNGMGLVTGNLG
Ga0209283_105983132	3300027875	Vadose Zone Soil	MRRVVLMALLALALPVAAFANSSVDFTNQGGTLTGSSSGLSLSSSMLIAVNGL
Ga0209169_106907771	3300027879	Soil	MKRMLLTALIALALPMMAFAGSSYDFTNSGGTLSGTNAGLSLTGSELI
Ga0209067_103499362	3300027898	Watersheds	MKRMFLLVLLALALPMAAFANNSVDFTNSGGTLSGSSAGLSLSGSTLIAVNGMG
Ga0209698_111015451	3300027911	Watersheds	MKRIVLLALLALALPLAAFANNSVDFTNSGGALSGSSAGMSLTGSELIAVNGFNG
Ga0209526_106247771	3300028047	Forest Soil	MKRVFWMALLALALPMVAFANNSVDFTNSGGTLAGSSTGLTLSGSELIAVNGLNGLGL
Ga0302222_102438591	3300028798	Palsa	MKRVILMALLAMALPLAAFADNSTDFTNSGGTLAGSSAGLSLSGSELIAVDGLGGGGLITGG
Ga0246001_10639731	3300029889	Peat	MKRIVLMAVLALALPLAAFANSVDFTNGGGLLKGSSAGLTLSSTLIAVNGLDG
Ga0302271_102972972	3300029998	Bog	MRRALFIALLALALPMAAFASSSVDFTNSGGTLTGTNSGFTLSGSVLIAVNGLNGGGLIT
Ga0310037_101908532	3300030494	Peatlands Soil	MKRVLLVALLGLALPLVAFASNSIDFTNSGGTLSGSNAGLTLTGSELIA
Ga0210278_11527052	3300030596	Soil	GSRKEAVTMKRMLLVALLALALPLVALASDSIDFTNSGGTLSGSNAGLTLTGSELIAVNGLNSLGLVTGNL
Ga0170824_1013500921	3300031231	Forest Soil	MRKILLLAVLALALPLAAFAGSSVDFTNSGGTLAGSSAGLTLSGSELIAVKGLSGLGL
Ga0302324_1001624095	3300031236	Palsa	MKRIFLMALLALALPLAAFGSGSVDFTNSGGSLTGSSAGLSLSGSVLIAVNGYGGLGLVTGPNLG
Ga0265328_101789801	3300031239	Rhizosphere	MKRMLWLCLVALALPMAAFANNSVDFTNSGGTLAGSSAGLTLSGSELIAVNGLNGLGLVT
Ga0265316_101226031	3300031344	Rhizosphere	MKKILLLAVLALALPTAMFAGSSVDYTNGGGTLSGSSAGLSLSGSVLIVVNGLN
Ga0302320_111039512	3300031524	Bog	MKRVLLLFALALALPFMAFASNSVDFTNSGGTLSGTSSGLSLTGSTLVFVNGFGGGGLITGS
Ga0310686_1097977911	3300031708	Soil	MKRMVLMALLAMALPLAAFADNSVDFTNSGGTLSGSSAGLSLTGSELIAVNGLGG
Ga0316037_1110411	3300031808	Soil	MKRMILMALLAMALPLAAFADNSVDFTNSGGTLSGSSAGLSLTGSELIAVNGLG
Ga0306925_112174332	3300031890	Soil	MKRIFLLGLLALALPLAASASSVDFTNGGGTLSGSNSGLSLSGSTLIAVNGLGGMGIVTGDLGT
Ga0311301_116395661	3300032160	Peatlands Soil	MKRVLLVALLGLALPLVAFASNSIDFTNSGGTLSGSNAGLSLTGSELIAVNG
Ga0306920_1035335171	3300032261	Soil	MKRMFWLVLILALPVAALGSSVDFTNSGGTLTGTNAGFNLSSSTLIEVNGLNGMGLVTGNLG
Ga0348332_142015361	3300032515	Plant Litter	MKRMILMALLAMALPLAAFADNSVDFTNSGGTLSGSSAGLSLTGSELIAVNGLGG
Ga0335082_107008931	3300032782	Soil	MKRILVLCFLALALPMAAFANNSVDFTNAGGTLSGSSAGLSLTGSTLIAMG
Ga0335079_1000175227	3300032783	Soil	MKRFALLILLALALPMAAFANNSTDFGNNGGTLSGSSAGLTLSGSMLISMGP
Ga0335078_103969553	3300032805	Soil	MKRMLWMALLALALPMAAFATNSVDFTNSGGVLSGSSAGLSLTGSELIAVNGLNGM
Ga0335080_115951991	3300032828	Soil	MKRILLMALLALALPLSVFGSSSVDFTNSGGTLSGSSAGLTLTGSVLIAVNGFENLGL
Ga0310914_104017121	3300033289	Soil	MKRIVLLFLLALALPMAAFASNSFDFTNAGGTLSGSSAGLTLTGSTLIAMGNGGMPI
Ga0334854_046492_2_196	3300033829	Soil	MKRIVLMALLAMALPLAAFASSSVDFTNSGGILSGSSAGMSLTGSELIAINGLGGGGLITGGLGG

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.37
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.37
Powered by PDBe Molstar

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F048475

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign