Metagenome / Metatranscriptome Family F048547

Basic Information
Family ID	F048547
Family Type	Metagenome / Metatranscriptome
Number of Sequences	148
Average Sequence Length	50 residues
Representative Sequence	LVFHLQRRGGEFAAKQGEFFAEQRRDYIAPSRNGDTTGGLDRVGAAASA
Number of Associated Samples	143
Number of Associated Scaffolds	148

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.68 %
% of genes near scaffold ends (potentially truncated)	15.54 %
% of genes from short scaffolds (< 2000 bps)	80.41 %
Associated GOLD sequencing projects	132
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.27

Most Common Taxonomy
Group	Bacteria (97.973 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (12.162 % of family members)
Environment Ontology (ENVO)	Unclassified (32.432 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (48.649 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 45.45% β-sheet: 0.00% Coil/Unstructured: 54.55%
Feature Viewer

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Pfam ID	Name	% Frequency in 148 Family Scaffolds
PF13416	SBP_bac_8	20.27
PF01547	SBP_bac_1	14.19
PF01546	Peptidase_M20	10.81
PF01740	STAS	4.05
PF00528	BPD_transp_1	2.03
PF07969	Amidohydro_3	1.35
PF03949	Malic_M	0.68
PF03992	ABM	0.68

COG ID	Name	Functional Category	% Frequency in 148 Family Scaffolds
COG0281	Malic enzyme	Energy production and conversion [C]	0.68
COG0686	Alanine dehydrogenase (includes sporulation protein SpoVN)	Amino acid transport and metabolism [E]	0.68

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	99.32 %
Unclassified	root	N/A	0.68 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	99.32 %
Unclassified	root	N/A	0.68 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	97.97 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	1.35 %
Unclassified	root	N/A	0.68 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	85.81 %
Opisthokonta	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta	1.35 %
Unclassified	root	N/A	0.68 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	84.46 %
Metazoa	kingdom	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa	1.35 %
Unclassified	root	N/A	0.68 %

Name	Rank	Taxonomy	Distribution
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	53.38 %
Eumetazoa	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa	1.35 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	0.68 %
Unclassified	root	N/A	0.68 %

Name	Rank	Taxonomy	Distribution
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	52.03 %
Bilateria	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria	1.35 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.68 %
Unclassified	root	N/A	0.68 %

Name	Rank	Taxonomy	Distribution
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	32.43 %
Deuterostomia	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Deuterostomia	1.35 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.68 %
Unclassified	root	N/A	0.68 %

Name	Rank	Taxonomy	Distribution
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	4.05 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	3.38 %
Chordata	phylum	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Deuterostomia → Chordata	1.35 %
Bradyrhizobium tropiciagri	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium tropiciagri	0.68 %
Bradyrhizobium liaoningense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium liaoningense	0.68 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.68 %
Unclassified	root	N/A	0.68 %

Name	Rank	Taxonomy	Distribution
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	4.05 %
Bradyrhizobium sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.	2.03 %
Craniata	subphylum	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Deuterostomia → Chordata → Craniata	1.35 %
Bradyrhizobium sp. WSM1743	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. WSM1743	1.35 %
Bradyrhizobium tropiciagri	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium tropiciagri	0.68 %
Bradyrhizobium liaoningense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium liaoningense	0.68 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.68 %
Unclassified	root	N/A	0.68 %

Name	Rank	Taxonomy	Distribution
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	4.05 %
Bradyrhizobium sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.	2.03 %
Vertebrata	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Deuterostomia → Chordata → Craniata → Vertebrata	1.35 %
Bradyrhizobium sp. WSM1743	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. WSM1743	1.35 %
Bradyrhizobium tropiciagri	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium tropiciagri	0.68 %
Bradyrhizobium liaoningense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium liaoningense	0.68 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.68 %
Unclassified	root	N/A	0.68 %

Name	Rank	Taxonomy	Distribution
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	4.05 %
Bradyrhizobium sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.	2.03 %
Gnathostomata	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Deuterostomia → Chordata → Craniata → Vertebrata → Gnathostomata	1.35 %
Bradyrhizobium sp. WSM1743	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. WSM1743	1.35 %
Bradyrhizobium tropiciagri	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium tropiciagri	0.68 %
Bradyrhizobium liaoningense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium liaoningense	0.68 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.68 %
Unclassified	root	N/A	0.68 %

Name	Rank	Taxonomy	Distribution
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	4.05 %
Bradyrhizobium sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.	2.03 %
Chondrichthyes	class	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Deuterostomia → Chordata → Craniata → Vertebrata → Gnathostomata → Chondrichthyes	1.35 %
Bradyrhizobium sp. WSM1743	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. WSM1743	1.35 %
Bradyrhizobium tropiciagri	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium tropiciagri	0.68 %
Bradyrhizobium liaoningense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium liaoningense	0.68 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.68 %
Unclassified	root	N/A	0.68 %

Name	Rank	Taxonomy	Distribution
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	4.05 %
Bradyrhizobium sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.	2.03 %
Elasmobranchii	subclass	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Deuterostomia → Chordata → Craniata → Vertebrata → Gnathostomata → Chondrichthyes → Elasmobranchii	1.35 %
Bradyrhizobium sp. WSM1743	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. WSM1743	1.35 %
Bradyrhizobium tropiciagri	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium tropiciagri	0.68 %
Bradyrhizobium liaoningense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium liaoningense	0.68 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.68 %
Unclassified	root	N/A	0.68 %

Name	Rank	Taxonomy	Distribution
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	4.05 %
Bradyrhizobium sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.	2.03 %
Selachii	infraclass	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Deuterostomia → Chordata → Craniata → Vertebrata → Gnathostomata → Chondrichthyes → Elasmobranchii → Selachii	1.35 %
Bradyrhizobium sp. WSM1743	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. WSM1743	1.35 %
Bradyrhizobium tropiciagri	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium tropiciagri	0.68 %
Bradyrhizobium liaoningense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium liaoningense	0.68 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.68 %
Unclassified	root	N/A	0.68 %

Name	Rank	Taxonomy	Distribution
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	4.05 %
Bradyrhizobium sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.	2.03 %
Galeomorphii	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Deuterostomia → Chordata → Craniata → Vertebrata → Gnathostomata → Chondrichthyes → Elasmobranchii → Selachii → Galeomorphii	1.35 %
Bradyrhizobium sp. WSM1743	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. WSM1743	1.35 %
Bradyrhizobium tropiciagri	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium tropiciagri	0.68 %
Bradyrhizobium liaoningense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium liaoningense	0.68 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.68 %
Unclassified	root	N/A	0.68 %

Name	Rank	Taxonomy	Distribution
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	4.05 %
Bradyrhizobium sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.	2.03 %
Galeoidea	superorder	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Deuterostomia → Chordata → Craniata → Vertebrata → Gnathostomata → Chondrichthyes → Elasmobranchii → Selachii → Galeomorphii → Galeoidea	1.35 %
Bradyrhizobium sp. WSM1743	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. WSM1743	1.35 %
Bradyrhizobium tropiciagri	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium tropiciagri	0.68 %
Bradyrhizobium liaoningense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium liaoningense	0.68 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.68 %
Unclassified	root	N/A	0.68 %

Name	Rank	Taxonomy	Distribution
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	4.05 %
Bradyrhizobium sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.	2.03 %
Orectolobiformes	order	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Deuterostomia → Chordata → Craniata → Vertebrata → Gnathostomata → Chondrichthyes → Elasmobranchii → Selachii → Galeomorphii → Galeoidea → Orectolobiformes	1.35 %
Bradyrhizobium sp. WSM1743	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. WSM1743	1.35 %
Bradyrhizobium tropiciagri	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium tropiciagri	0.68 %
Bradyrhizobium liaoningense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium liaoningense	0.68 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.68 %
Unclassified	root	N/A	0.68 %

Name	Rank	Taxonomy	Distribution
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	4.05 %
Bradyrhizobium sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.	2.03 %
Hemiscylliidae	family	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Deuterostomia → Chordata → Craniata → Vertebrata → Gnathostomata → Chondrichthyes → Elasmobranchii → Selachii → Galeomorphii → Galeoidea → Orectolobiformes → Hemiscylliidae	1.35 %
Bradyrhizobium sp. WSM1743	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. WSM1743	1.35 %
Bradyrhizobium tropiciagri	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium tropiciagri	0.68 %
Bradyrhizobium liaoningense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium liaoningense	0.68 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.68 %
Unclassified	root	N/A	0.68 %

Name	Rank	Taxonomy	Distribution
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	4.05 %
Bradyrhizobium sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.	2.03 %
Chiloscyllium	genus	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Deuterostomia → Chordata → Craniata → Vertebrata → Gnathostomata → Chondrichthyes → Elasmobranchii → Selachii → Galeomorphii → Galeoidea → Orectolobiformes → Hemiscylliidae → Chiloscyllium	1.35 %
Bradyrhizobium sp. WSM1743	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. WSM1743	1.35 %
Bradyrhizobium tropiciagri	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium tropiciagri	0.68 %
Bradyrhizobium liaoningense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium liaoningense	0.68 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.68 %
Unclassified	root	N/A	0.68 %

Name	Rank	Taxonomy	Distribution
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	4.05 %
Bradyrhizobium sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.	2.03 %
Chiloscyllium punctatum	species	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Deuterostomia → Chordata → Craniata → Vertebrata → Gnathostomata → Chondrichthyes → Elasmobranchii → Selachii → Galeomorphii → Galeoidea → Orectolobiformes → Hemiscylliidae → Chiloscyllium → Chiloscyllium punctatum	1.35 %
Bradyrhizobium sp. WSM1743	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. WSM1743	1.35 %
Bradyrhizobium tropiciagri	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium tropiciagri	0.68 %
Bradyrhizobium liaoningense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium liaoningense	0.68 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.68 %
Unclassified	root	N/A	0.68 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459007\|GJ61VE201B7D8D	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	516	Open in IMG/M
3300000955\|JGI1027J12803_102202519	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	653	Open in IMG/M
3300003659\|JGI25404J52841_10005110	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2702	Open in IMG/M
3300003659\|JGI25404J52841_10015466	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1655	Open in IMG/M
3300003911\|JGI25405J52794_10068986	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	770	Open in IMG/M
3300004153\|Ga0063455_101228466	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	565	Open in IMG/M
3300004633\|Ga0066395_10522526	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	687	Open in IMG/M
3300004801\|Ga0058860_11471246	All Organisms → cellular organisms → Bacteria	630	Open in IMG/M
3300005167\|Ga0066672_10172383	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1367	Open in IMG/M
3300005171\|Ga0066677_10041289	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2264	Open in IMG/M
3300005172\|Ga0066683_10042913	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.	2650	Open in IMG/M
3300005175\|Ga0066673_10881697	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	509	Open in IMG/M
3300005178\|Ga0066688_10880934	All Organisms → cellular organisms → Bacteria	554	Open in IMG/M
3300005328\|Ga0070676_10044313	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2589	Open in IMG/M
3300005328\|Ga0070676_11537117	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	513	Open in IMG/M
3300005334\|Ga0068869_100060016	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2786	Open in IMG/M
3300005339\|Ga0070660_100425671	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1100	Open in IMG/M
3300005340\|Ga0070689_100173789	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1746	Open in IMG/M
3300005366\|Ga0070659_100337038	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1263	Open in IMG/M
3300005439\|Ga0070711_101025447	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Deuterostomia → Chordata → Craniata → Vertebrata → Gnathostomata → Chondrichthyes → Elasmobranchii → Selachii → Galeomorphii → Galeoidea → Orectolobiformes → Hemiscylliidae → Chiloscyllium → Chiloscyllium punctatum	709	Open in IMG/M
3300005441\|Ga0070700_100243406	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1286	Open in IMG/M
3300005456\|Ga0070678_100079476	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.	2481	Open in IMG/M
3300005457\|Ga0070662_100070228	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.	2580	Open in IMG/M
3300005467\|Ga0070706_101875421	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	544	Open in IMG/M
3300005518\|Ga0070699_100680471	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	939	Open in IMG/M
3300005536\|Ga0070697_100905612	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	783	Open in IMG/M
3300005549\|Ga0070704_100244755	All Organisms → cellular organisms → Bacteria	1470	Open in IMG/M
3300005552\|Ga0066701_10014731	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. WSM1743	3710	Open in IMG/M
3300005556\|Ga0066707_10455424	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	830	Open in IMG/M
3300005574\|Ga0066694_10428136	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	620	Open in IMG/M
3300005576\|Ga0066708_10393677	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	889	Open in IMG/M
3300005577\|Ga0068857_100044648	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. WSM1743	3932	Open in IMG/M
3300005586\|Ga0066691_10253595	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1033	Open in IMG/M
3300005598\|Ga0066706_10478338	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	992	Open in IMG/M
3300005616\|Ga0068852_100144262	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2207	Open in IMG/M
3300005713\|Ga0066905_100653759	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	896	Open in IMG/M
3300005981\|Ga0081538_10098987	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium tropiciagri	1475	Open in IMG/M
3300005983\|Ga0081540_1255270	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	611	Open in IMG/M
3300006032\|Ga0066696_10618656	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	702	Open in IMG/M
3300006041\|Ga0075023_100098103	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1009	Open in IMG/M
3300006048\|Ga0075363_100068240	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1928	Open in IMG/M
3300006050\|Ga0075028_100038803	All Organisms → cellular organisms → Bacteria	2231	Open in IMG/M
3300006162\|Ga0075030_100415405	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1072	Open in IMG/M
3300006172\|Ga0075018_10024338	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2369	Open in IMG/M
3300006172\|Ga0075018_10724737	All Organisms → cellular organisms → Bacteria	539	Open in IMG/M
3300006175\|Ga0070712_100277504	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1348	Open in IMG/M
3300006178\|Ga0075367_10049252	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2483	Open in IMG/M
3300006186\|Ga0075369_10029722	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2297	Open in IMG/M
3300006354\|Ga0075021_10063651	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2148	Open in IMG/M
3300006796\|Ga0066665_10281499	All Organisms → cellular organisms → Bacteria → Proteobacteria	1329	Open in IMG/M
3300006854\|Ga0075425_100732645	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1134	Open in IMG/M
3300006871\|Ga0075434_101909508	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	600	Open in IMG/M
3300009012\|Ga0066710_103322080	All Organisms → cellular organisms → Bacteria	614	Open in IMG/M
3300009094\|Ga0111539_10475134	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1456	Open in IMG/M
3300009101\|Ga0105247_10037163	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2971	Open in IMG/M
3300009137\|Ga0066709_102804854	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	646	Open in IMG/M
3300009156\|Ga0111538_10603238	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1392	Open in IMG/M
3300009176\|Ga0105242_10881517	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	893	Open in IMG/M
3300010046\|Ga0126384_11429325	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	646	Open in IMG/M
3300010047\|Ga0126382_12417398	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium liaoningense	510	Open in IMG/M
3300010333\|Ga0134080_10274415	All Organisms → cellular organisms → Bacteria	750	Open in IMG/M
3300010358\|Ga0126370_11606983	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	622	Open in IMG/M
3300010364\|Ga0134066_10418953	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	515	Open in IMG/M
3300010371\|Ga0134125_10404293	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1514	Open in IMG/M
3300010398\|Ga0126383_11598144	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	741	Open in IMG/M
3300010400\|Ga0134122_11340343	All Organisms → cellular organisms → Bacteria	726	Open in IMG/M
3300010401\|Ga0134121_10441307	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1186	Open in IMG/M
3300011106\|Ga0151489_1010744	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	563	Open in IMG/M
3300011119\|Ga0105246_10639067	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	925	Open in IMG/M
3300012201\|Ga0137365_11190805	All Organisms → cellular organisms → Bacteria	545	Open in IMG/M
3300012202\|Ga0137363_10187508	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1651	Open in IMG/M
3300012203\|Ga0137399_10811726	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	788	Open in IMG/M
3300012204\|Ga0137374_10777458	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	712	Open in IMG/M
3300012205\|Ga0137362_10178808	Not Available	1822	Open in IMG/M
3300012211\|Ga0137377_10097963	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2775	Open in IMG/M
3300012355\|Ga0137369_10174752	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1683	Open in IMG/M
3300012358\|Ga0137368_10296958	All Organisms → cellular organisms → Bacteria → Proteobacteria	1094	Open in IMG/M
3300012359\|Ga0137385_10517175	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1009	Open in IMG/M
3300012361\|Ga0137360_10657902	All Organisms → cellular organisms → Bacteria	898	Open in IMG/M
3300012469\|Ga0150984_123071356	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	616	Open in IMG/M
3300012685\|Ga0137397_10224797	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1397	Open in IMG/M
3300012918\|Ga0137396_10600273	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	814	Open in IMG/M
3300012929\|Ga0137404_11779087	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	573	Open in IMG/M
3300012930\|Ga0137407_12213763	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	525	Open in IMG/M
3300012948\|Ga0126375_10612769	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	833	Open in IMG/M
3300012951\|Ga0164300_10674122	All Organisms → cellular organisms → Bacteria	622	Open in IMG/M
3300012955\|Ga0164298_10657576	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	729	Open in IMG/M
3300012960\|Ga0164301_10967280	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	666	Open in IMG/M
3300012961\|Ga0164302_10018314	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2970	Open in IMG/M
3300012984\|Ga0164309_10858844	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	736	Open in IMG/M
3300012987\|Ga0164307_11546979	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	561	Open in IMG/M
3300012988\|Ga0164306_11758080	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	538	Open in IMG/M
3300013105\|Ga0157369_10909165	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	902	Open in IMG/M
3300013297\|Ga0157378_10853672	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	939	Open in IMG/M
3300013306\|Ga0163162_12557500	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	587	Open in IMG/M
3300014969\|Ga0157376_11215254	All Organisms → cellular organisms → Bacteria	782	Open in IMG/M
3300015241\|Ga0137418_10821752	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	694	Open in IMG/M
3300015242\|Ga0137412_10491509	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	940	Open in IMG/M
3300015262\|Ga0182007_10204790	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Deuterostomia → Chordata → Craniata → Vertebrata → Gnathostomata → Chondrichthyes → Elasmobranchii → Selachii → Galeomorphii → Galeoidea → Orectolobiformes → Hemiscylliidae → Chiloscyllium → Chiloscyllium punctatum	691	Open in IMG/M
3300015265\|Ga0182005_1194285	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	608	Open in IMG/M
3300015357\|Ga0134072_10369513	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	556	Open in IMG/M
3300015373\|Ga0132257_104065011	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	532	Open in IMG/M
3300017792\|Ga0163161_10263992	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1345	Open in IMG/M
3300018031\|Ga0184634_10140706	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1078	Open in IMG/M
3300018061\|Ga0184619_10129303	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1146	Open in IMG/M
3300018074\|Ga0184640_10369218	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	650	Open in IMG/M
3300018076\|Ga0184609_10029010	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	2260	Open in IMG/M
3300018081\|Ga0184625_10075197	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	1722	Open in IMG/M
3300018431\|Ga0066655_10028812	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	2682	Open in IMG/M
3300018433\|Ga0066667_11145746	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	674	Open in IMG/M
3300018468\|Ga0066662_11403752	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	722	Open in IMG/M
3300018482\|Ga0066669_11360662	All Organisms → cellular organisms → Bacteria	643	Open in IMG/M
3300020579\|Ga0210407_10982132	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	645	Open in IMG/M
3300021170\|Ga0210400_11132936	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	632	Open in IMG/M
3300021479\|Ga0210410_10158692	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2017	Open in IMG/M
3300022694\|Ga0222623_10054299	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1542	Open in IMG/M
3300025899\|Ga0207642_10446881	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	782	Open in IMG/M
3300025903\|Ga0207680_10195487	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1375	Open in IMG/M
3300025903\|Ga0207680_10279479	All Organisms → cellular organisms → Bacteria	1160	Open in IMG/M
3300025920\|Ga0207649_10281361	All Organisms → cellular organisms → Bacteria	1209	Open in IMG/M
3300025932\|Ga0207690_10075546	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2337	Open in IMG/M
3300025933\|Ga0207706_10044399	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3939	Open in IMG/M
3300025942\|Ga0207689_10656821	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	883	Open in IMG/M
3300025949\|Ga0207667_10839855	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	913	Open in IMG/M
3300026075\|Ga0207708_10122129	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	2030	Open in IMG/M
3300026089\|Ga0207648_10075663	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2935	Open in IMG/M
3300026118\|Ga0207675_100027467	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	5300	Open in IMG/M
3300026121\|Ga0207683_10100775	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2578	Open in IMG/M
3300026324\|Ga0209470_1287475	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	621	Open in IMG/M
3300026325\|Ga0209152_10100079	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1091	Open in IMG/M
3300026327\|Ga0209266_1067351	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1680	Open in IMG/M
3300026333\|Ga0209158_1191965	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	720	Open in IMG/M
3300026524\|Ga0209690_1044685	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	2019	Open in IMG/M
3300026548\|Ga0209161_10193615	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1132	Open in IMG/M
3300027775\|Ga0209177_10250889	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	654	Open in IMG/M
3300027866\|Ga0209813_10041650	All Organisms → cellular organisms → Bacteria	1401	Open in IMG/M
3300027911\|Ga0209698_10268573	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1358	Open in IMG/M
3300027915\|Ga0209069_10010686	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	4443	Open in IMG/M
3300027915\|Ga0209069_10640312	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	617	Open in IMG/M
3300028380\|Ga0268265_10830666	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	903	Open in IMG/M
3300028711\|Ga0307293_10122308	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	827	Open in IMG/M
3300030993\|Ga0308190_1119439	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	597	Open in IMG/M
3300031058\|Ga0308189_10018864	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1589	Open in IMG/M
3300031199\|Ga0307495_10137433	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	620	Open in IMG/M
3300031474\|Ga0170818_111748479	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	991	Open in IMG/M
3300031715\|Ga0307476_10440396	All Organisms → cellular organisms → Bacteria	964	Open in IMG/M
3300031740\|Ga0307468_100380482	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1068	Open in IMG/M
3300031847\|Ga0310907_10159639	All Organisms → cellular organisms → Bacteria	1044	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	68.24%
Host-Associated	Host-Associated	31.76%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	58.11%
Plants	Host-Associated → Plants	31.08%
Aquatic	Environmental → Aquatic	10.14%
Human	Host-Associated → Human	0.68%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	58.11%
Rhizosphere	Host-Associated → Plants → Rhizosphere	15.54%
Rhizoplane	Host-Associated → Plants → Rhizoplane	12.16%
Sediment	Environmental → Aquatic → Sediment	10.14%
Roots	Host-Associated → Plants → Roots	3.38%
Digestive System	Host-Associated → Human → Digestive System	0.68%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	48.65%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	10.14%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	10.14%
Loam	Environmental → Terrestrial → Soil → Loam	9.46%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	8.11%
Soil	Host-Associated → Plants → Rhizosphere → Soil	7.43%
Bulk Soil	Host-Associated → Plants → Roots → Bulk Soil	2.70%
Soil	Host-Associated → Plants → Rhizoplane → Soil	1.35%
Large Intestine	Host-Associated → Human → Digestive System → Large Intestine	0.68%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.68%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.68%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	26.35%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	16.89%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	10.14%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	10.14%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	8.11%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	7.43%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.08%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	4.05%
Unclassified	Host-Associated → Plants → Roots → Bulk Soil → Unclassified	2.70%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	2.03%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.35%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	1.35%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.68%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.68%
Fecal	Host-Associated → Human → Digestive System → Large Intestine → Fecal	0.68%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.68%
Unclassified	Host-Associated → Plants → Roots → Rhizosphere → Unclassified	0.68%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	12.16%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	10.81%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	7.43%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	6.08%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.41%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	4.05%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	4.05%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	3.38%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	3.38%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	2.70%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	2.70%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	2.70%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.70%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.03%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	2.03%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.03%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	2.03%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	2.03%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.35%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.35%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.35%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.35%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	1.35%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.35%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	1.35%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.35%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.35%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.35%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.68%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.68%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.68%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.68%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.68%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.68%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.68%
Host-Associated	Host-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated	0.68%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.68%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Unclassified → Tabebuia Heterophylla Rhizosphere	0.68%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.68%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.68%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.68%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459007	Grass soil microbial communities from Rothamsted Park, UK - March 2009 indirect in plug lysis (for fosmid construction) 10-21cm	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300003659	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1	Host-Associated	Open in IMG/M
3300003911	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300004153	Grasslands soil microbial communities from Hopland, California, USA (version 2)	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300004801	Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - roots SR-3 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005339	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG	Host-Associated	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005574	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143	Environmental	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005981	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1	Host-Associated	Open in IMG/M
3300005983	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1	Host-Associated	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006041	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014	Environmental	Open in IMG/M
3300006048	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3	Host-Associated	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006162	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012	Environmental	Open in IMG/M
3300006172	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006178	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2	Host-Associated	Open in IMG/M
3300006186	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4	Host-Associated	Open in IMG/M
3300006354	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010364	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09212015	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300011106	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLMC (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012358	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_100_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300013105	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG	Host-Associated	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015242	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015262	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG	Host-Associated	Open in IMG/M
3300015265	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG	Host-Associated	Open in IMG/M
3300015357	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_0_1 metaG	Environmental	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300018031	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b1	Environmental	Open in IMG/M
3300018061	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1	Environmental	Open in IMG/M
3300018074	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b2	Environmental	Open in IMG/M
3300018076	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coex	Environmental	Open in IMG/M
3300018081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300022694	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_coex	Environmental	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025903	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025920	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025932	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025949	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026324	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125 (SPAdes)	Environmental	Open in IMG/M
3300026325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107 (SPAdes)	Environmental	Open in IMG/M
3300026327	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132 (SPAdes)	Environmental	Open in IMG/M
3300026333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140 (SPAdes)	Environmental	Open in IMG/M
3300026524	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150 (SPAdes)	Environmental	Open in IMG/M
3300026548	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155 (SPAdes)	Environmental	Open in IMG/M
3300027775	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control (SPAdes)	Environmental	Open in IMG/M
3300027866	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes)	Host-Associated	Open in IMG/M
3300027911	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)	Environmental	Open in IMG/M
3300027915	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013 (SPAdes)	Environmental	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028711	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_150	Environmental	Open in IMG/M
3300030993	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_185 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031058	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_184 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031199	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 7_S	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031847	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D4	Environmental	Open in IMG/M

Geographical Distribution

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Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.27
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.27
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F048547

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
L02_05531940	2170459007	Grass Soil	LLVLHSPRRGGEFAAKQSEFFAERRRDYIAPGRNGDTTGGLDRGGAAARA
JGI1027J12803_1022025192	3300000955	Soil	LLVFHLQRRGGEFAAKQGEFFAEQRRDYIVPGRNGDTTGGLDRVGAAASA*
JGI25404J52841_100051103	3300003659	Tabebuia Heterophylla Rhizosphere	MRWPDDHLLVIHLQRRGGEFAAKQGEFFAEQRRDYIVPNRNGDATGGLDRVGAAATP*
JGI25404J52841_100154662	3300003659	Tabebuia Heterophylla Rhizosphere	LLVFHLQRRGGEFVAKQEEFFAERRRDYIAPSRNGDTTGGLDRVGAAASA*
JGI25405J52794_100689861	3300003911	Tabebuia Heterophylla Rhizosphere	LLVFHLQRRGGEFAAKQGEFFAEQRRDYIVPNRNGDTTGGLDRVGVAASACTLPS*
Ga0063455_1012284662	3300004153	Soil	MYWLDDHLVAFHLQRRGGEFAANQGAFFAEQRRDCIAPNRNGDTIGGLDHVGAAASA*
Ga0066395_105225261	3300004633	Tropical Forest Soil	MRWLDDHLLVFHLQRCGGEFAAKQVEFFAEQRRDCIVPNRNDDTAGGLDRVGA
Ga0058860_114712462	3300004801	Host-Associated	LLVLHLQRRGGEFAAKPGEFLAEQRRDYVAPSRNGDTTGGLDRVGAASA*
Ga0066672_101723832	3300005167	Soil	LLVFHLQRRGGEFAAKQGEFFAEQRRDYIAPSRNGDTTGGLDRVGAAASA*
Ga0066677_100412892	3300005171	Soil	LVFHLQRRGGEFAAKQGEFFAEQRRDYIAPSRNGDTTGGLDRVGAAASA*
Ga0066683_100429133	3300005172	Soil	LVFHLQRRGGEFAAKQGEFFAVQRRDYIAPSRNGDTTGGLDRVGAAASA*
Ga0066673_108816971	3300005175	Soil	LLVFHLQRRGGEFAAKQGEFFAEQWRDYIAPSRNGDTTGGLDRVGAAASA*
Ga0066688_108809342	3300005178	Soil	LLVFHLQRRGGEFAAKQGEFFAVQRRDYIAPSRNGDTTGGLDRVGAAASA*
Ga0070676_100443133	3300005328	Miscanthus Rhizosphere	LVLHLQRRGGEFAAKPGEFLAEQRRDYVAPSRNGDTTGGLDRVGAASA*
Ga0070676_115371172	3300005328	Miscanthus Rhizosphere	RGGEFAANQGAFFAEQRRDCIAPNRNGDTIGGLDHVGAAASA*
Ga0068869_1000600162	3300005334	Miscanthus Rhizosphere	LHWLDDPLVAFHLQRRGGEFAANQGAFFAEQRRDCIAPNRNGDTIGGLDHVGAAASA*
Ga0070660_1004256713	3300005339	Corn Rhizosphere	LQRRGGEFAAKPGEFLAEQRRDYVAPSRNGDTTGGLDRVGAAASA*
Ga0070689_1001737891	3300005340	Switchgrass Rhizosphere	GEFAAKPHEFFAEQRRDYIAPSRNGDTTGGLDRVGAAASA*
Ga0070659_1003370382	3300005366	Corn Rhizosphere	LLVLHLQRRGGEFAAKPGKFLAEQRRDYIAPSRNGDTTGGL
Ga0070711_1010254472	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	GEFAAKQGEFFAEQRRDYIAPSRNGDTTGGLDRVGAAASA*
Ga0070700_1002434062	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	LVLHLQRRGGEFAAKQGEFFAEQRRDYIAPSRNGDTTGGLDRVGAAASA*
Ga0070678_1000794761	3300005456	Miscanthus Rhizosphere	LQRRGGEFAAKPGEFLAEQRRDYVAPSRNGDTTGGLDRVGAASA*
Ga0070662_1000702283	3300005457	Corn Rhizosphere	LVLQLQRRGGEFAAKPGEFLAEQRRDYIAPSRNGDTTGGLDRVGAASA*
Ga0070706_1018754211	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	CGGEFAAKQGEFFAEQRRDYIAPSRNGDTTGGLDRVGAAASA*
Ga0070699_1006804712	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	LVFHLQRRGGEFVAKQGEFFAEQRRDYIAPSRNGDTTGGLDRVGAAASA*
Ga0070697_1009056122	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	LVFHLQRRGGEFAAKQGEFFAEQRRDYIVPNRNGDTTGGLDRVGAAASA*
Ga0070704_1002447551	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	LLVLHLQRRGGEFAAKPGEFLAEQRRDYVAPSRNGDTTGGLDRVGAAASA*
Ga0066701_100147314	3300005552	Soil	LVFHLQRRGGEFAAKQGEFFAVQRRDYIAPSRSGDTTGGLDRVGAAASA*
Ga0066707_104554241	3300005556	Soil	LVFHLQRRGGEFAAKQGDFFAEQRRDYIAPSRNGDTTGGLDRVGAAASA*
Ga0066694_104281362	3300005574	Soil	LLVFHLQRRGGEFAAKQGEFFAEQWRDYTAPSRNGDTTGGLDRVGAAASA*
Ga0066708_103936772	3300005576	Soil	LVFHLQRRGGEFAAKQGEFFAEQWRDYIAPSRNGDTTGGLDRVGAAASA*
Ga0068857_1000446485	3300005577	Corn Rhizosphere	LVLHLQRRGGEFAAKPGEFLAEQRRDYIAPSRNGDTTGGLDRVGAASA*
Ga0066691_102535952	3300005586	Soil	LVFHLQRRGGEFAAKQGEFFAEQRGDYIVPNRNGDTTGGLDRVGAAASA*
Ga0066706_104783382	3300005598	Soil	LVFHLQRRGGEFAAKQGEFFAEQWRDYTAPSRNGDTTGGLDRVGAAASA*
Ga0068852_1001442622	3300005616	Corn Rhizosphere	LLVLHLQRRGGEFAAKPGEFFAEQRRDYIAPSRNGDTTGGLDRVGAAASA*
Ga0066905_1006537592	3300005713	Tropical Forest Soil	LVFHLQRRGGEFAAKQGEFFAEQRRDYIAPSRNGDTTGALDCVGAAASAWTLPS*
Ga0081538_100989871	3300005981	Tabebuia Heterophylla Rhizosphere	MRWLDECLLVLDLQRRVGEFAAKQDEFFAEQGGDYIVSSRNGDTTGGLNRVGAAASA*
Ga0081540_12552701	3300005983	Tabebuia Heterophylla Rhizosphere	IRLLDDHLLVFHLQRRSGEFVAKQGEFFAEQRRDYIAPSRNGDTTGGLDRVGAAASA*
Ga0066696_106186561	3300006032	Soil	LLVFHLQRRGGEFAAKQGEFFAEQWRDYIAPRRNGDTTGGLDRVGAAASV*
Ga0075023_1000981032	3300006041	Watersheds	LVFHLQRRGGEFAAKQGEFFAEQRRGYIVPNRNGDTTGGLDRVGAAASA*
Ga0075363_1000682402	3300006048	Populus Endosphere	LVLHLQRRGGEFAAKPGKFLAEQRRDYIAPSRNGDTTGGLDRVGAAASA*
Ga0075028_1000388032	3300006050	Watersheds	LLVFHLQRRGGEFAAKQGEFFAEQRRDYIAPSRNGDTMGGLNRVGAAASA*
Ga0075030_1004154052	3300006162	Watersheds	LLVFHLQRRGGEFAAKQGEFFAEQRRDYIAPSRNGDTMGGLNR
Ga0075018_100243383	3300006172	Watersheds	LVFHLQRRGGEFAAKQGEFFAEQRRDYIAPSRNGDTMGGLNRVGAAASA*
Ga0075018_107247372	3300006172	Watersheds	LLVFHLQRRGGEFAAKQGEFFAEQRRDYIAPSRNGDTTGGLDRVGAAASASTLPS*
Ga0070712_1002775041	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	LVFHLQRRGGEFAAKQGEFFAEQRRDYIAPSRNGDSTGGLDRVGAAASA*
Ga0075367_100492523	3300006178	Populus Endosphere	LVLHLQRRGGEFAAKPGEFLAEQRRDYIAPSRNGDTTGGLDRVGAAASA*
Ga0075369_100297223	3300006186	Populus Endosphere	LVLHLQRRGGEFAAKPGEFFAEQRRDYIAPSRNGDTTGGLDRVGAAASA*
Ga0075021_100636512	3300006354	Watersheds	LVFHLQRRGGEFAAKQGEFFAEQRRDYIAPSRNGDTMGGLDRVGAAASA*
Ga0066665_102814991	3300006796	Soil	LLVFHLQRRGGEFAAKQGEFFAVQRRDYIAPSRSGDTTGGLDRVGAAASA*
Ga0075425_1007326452	3300006854	Populus Rhizosphere	LLVLHLQRRGGEFAAKPGKFFAEQRRDYIAPSRNGDTTGGLDRVGAAASA*
Ga0075434_1019095082	3300006871	Populus Rhizosphere	MHGLDDHSVVFHLQRRGGEFAANQGALFAEQRRDCIAPNRNGDTIGGLDGGLDQVGAAASA*
Ga0066710_1033220801	3300009012	Grasslands Soil	LLVFHLQRRGGEFAAKQGEFFAEQWRDYIAPSRNGDTTGGLDRVGAAASA
Ga0111539_104751342	3300009094	Populus Rhizosphere	LVLHLQRRGGEFAAKPGEFLAEQRRDYVAPSRNGDTTGGLDRVGAAASA*
Ga0105247_100371633	3300009101	Switchgrass Rhizosphere	LLVLHLQRRGGEFAAKPHEFFAEQRRDYIAPSRNGDTTGGLDRVGAAASA*
Ga0066709_1028048541	3300009137	Grasslands Soil	LVVFHLQRRGGEFAANQGGFFAEQRRDYIVANRNGDTTGGLDRVGAAGSA*
Ga0111538_106032381	3300009156	Populus Rhizosphere	LQRRGGEFAAKQGEFFAEQRRDYIAPSRNGDTTGGLDRVGSAASA*
Ga0105242_108815171	3300009176	Miscanthus Rhizosphere	LVFHLQRRGGEFVAKQGEFFAEQRRDYIAPSCNGDTTGGLDRVGAAARA*
Ga0126384_114293251	3300010046	Tropical Forest Soil	LVFHLQRRGGEFAAKQGEFFAEQRRDYIAPSRNGDSTGGLDRVGAAASAWTPPS*
Ga0126382_124173981	3300010047	Tropical Forest Soil	LVFCLQRRGGEFATKQDEFFAEQRRDYVVRRNGDTTGGLDRVGAAASACTLPS*
Ga0134080_102744152	3300010333	Grasslands Soil	LVLHLQRCGGEFAAKQGEFFAVQRRDYIAPSRNGDTTGGLDRVGAAASA*
Ga0126370_116069832	3300010358	Tropical Forest Soil	MRWLDDHLLVFHLQRCGGEFAAKQVEFFAEQRRDCIVPNRNDDTAGGLDRVGAAASA*
Ga0134066_104189532	3300010364	Grasslands Soil	LVFHLQRRGGEFAAKQGEFFAEQRRDYIVPSRNGYTTGGLDRIGAAASA*
Ga0134125_104042932	3300010371	Terrestrial Soil	LLVLHLQRRGGEFAAKPGEFFAEQRRDYVAPSRNGDTTGGLDRVGAASA*
Ga0126383_115981442	3300010398	Tropical Forest Soil	VACIMRWLDDHLLVFHLQRCGGEFAAKQVEFFAEQRRDCIVPNRNDDTAGGLDRVGAAASA*
Ga0134122_113403431	3300010400	Terrestrial Soil	LVFHLQRRGGEFAAKQGELFAEQRRDYIAPSRNGDATGGLDRVGAAARA*
Ga0134121_104413072	3300010401	Terrestrial Soil	MYWLDDHLVAFHLQRRGGEFAASQGAFFAGQRHDCIAPNRNGDTTGGLDHVGAAASA*
Ga0151489_10107442	3300011106	Soil	LLVFHLQRRGGEFAAKQGEFFAEQRRDYIVPNRNGDATGGLDRACAAAST*
Ga0105246_106390672	3300011119	Miscanthus Rhizosphere	LLVLHLQRRGGEFAAKPGKFLAEQRRDYIAPSRNGDTTGGLDRVGAASA*
Ga0137365_111908051	3300012201	Vadose Zone Soil	LLVFHLQRRGGEFAAKQGDFFAEQRRDYIAPSRNGDTTGGPDRVGAAASA*
Ga0137363_101875083	3300012202	Vadose Zone Soil	CAIRWLDDHLLVFHLQRRGGEFAAKQGEFFAEQRRDYIAPSRNGDTTGGLDRVGAAASA*
Ga0137399_108117262	3300012203	Vadose Zone Soil	LVFHLQRRGGEFAATQGEFFAEQRRDYIVPNRNGDTTGGLDRVGAAASA*
Ga0137374_107774581	3300012204	Vadose Zone Soil	LLVFHLQRRGGEFAAKQGEFFAEQQRDYIVPNRNGDTTGGLDRVGAAASA*
Ga0137362_101788083	3300012205	Vadose Zone Soil	LLVFHLQRRGGEFVAKQGEFFAEQRRDYIAPSRNGDTTGGLDRVGAAASA*
Ga0137377_100979633	3300012211	Vadose Zone Soil	LVFHLQRRGGEFAAKQGDFFAEQRRDYIAPSRNGDTTGGPDRVGAAASA*
Ga0137369_101747522	3300012355	Vadose Zone Soil	LVFHLPRRGGEFAAKQGEFFAEQRRDYIAPSRNGDTTGGLDRVGAAASA*
Ga0137368_102969582	3300012358	Vadose Zone Soil	LLVFHLQRRGGEFAAKQGEFFAEQRRDYIVPNRNGDTTGGLDSVGAAASA*
Ga0137385_105171752	3300012359	Vadose Zone Soil	VRRGGEFAAKQGEFFAEQRRDYIVPNRNGDTTGGLDRVGAAASA*
Ga0137360_106579021	3300012361	Vadose Zone Soil	LVFHLQRRGGEFATKQGEFFAEQRRDYIAPSRNGDTTGGLDRVGAAASA*
Ga0150984_1230713561	3300012469	Avena Fatua Rhizosphere	LLVFHLQRRGDEFAAKQGEFFAEQRRDYVVPNRNGDTTGGLDRVGAAASA*
Ga0137397_102247973	3300012685	Vadose Zone Soil	LLVFHLQRRGGEFAATQGEFFAEQRRDYIVPNRNGDTTGGLDRVGAAASA*
Ga0137396_106002731	3300012918	Vadose Zone Soil	LLVFHLQRRGGEFAATQGEFFAEQRRDYIVPNRYGDATGGLDRVGAAASA*
Ga0137404_117790872	3300012929	Vadose Zone Soil	MFHLQRRGGEFVAKRGEFFAEQRRDYIAPSRNGDTTGGLDRVGAAASA*
Ga0137407_122137632	3300012930	Vadose Zone Soil	LLDDHLLVFHLQRRGGEFAATQGEFFAEQRRDYIVPNRNGDTTGGLDRVGAAASA*
Ga0126375_106127692	3300012948	Tropical Forest Soil	LVFHLQRRVGEFAAKQGEFFAEQRRDCIVPNRNGDTTSGLDRVGAAASA*
Ga0164300_106741221	3300012951	Soil	LLVFHLQRRGGEFAAKQGEFFAEQRRDYIVPNRNGDTTGVLERVAAAASA*
Ga0164298_106575761	3300012955	Soil	LQRRGGEFAAKQGEFFAEQRRDYIVPNRNGDTTGGLDRVGAAASA*
Ga0164301_109672801	3300012960	Soil	RRPDDHLLVFHLQRRVGEFAAKQGAFFAEQRRDYIVPNRNGDTTGGLDRVGAAASA*
Ga0164302_100183143	3300012961	Soil	LVFHLHRRGGEFATKQGEFFAEQRRDYIVPNRNGDTTGGLDRVGAAASA*
Ga0164309_108588442	3300012984	Soil	LVFHLQRRGGEFATKQGEFFAEQRRDYIVPNRNGDTTGGLDRVGAAASA*
Ga0164307_115469791	3300012987	Soil	LDDHLLVFHLQRRGDEFAAKQGEFFAEQRRDYVVPNRNGDTTGGLDRVGAAASA*
Ga0164306_117580801	3300012988	Soil	LVFHLQRSGGEFAVKQGEFFAEQRRDYIVPNRNGDTTGGLDRVGAAASA*
Ga0157369_109091652	3300013105	Corn Rhizosphere	LVFHLQRSGGELAAKRGESFAEQRHDYIVPNRNGDTTGGLDRVGAAASA*
Ga0157378_108536722	3300013297	Miscanthus Rhizosphere	LVLQLQRRGGEFGAKPGKFLAEQRRDYIAPSRNGDTTGGLDRVGAAASA*
Ga0163162_125575002	3300013306	Switchgrass Rhizosphere	MQRRGGEFAAKQGEFFADQRRDYIVPSRNGDTTGGLDRVGAAASA*
Ga0157376_112152542	3300014969	Miscanthus Rhizosphere	LVFHLQRRCGEFAAKQGEFFAEQRRDYIVPNRNGDTTGGLDRVGAAASACTPPS*
Ga0137418_108217522	3300015241	Vadose Zone Soil	AIRWLDDHLLVFHLQRRGGEFAAKQGEFFAEQRRDYIVPNRNGDTTGGLDRVGAAASA*
Ga0137412_104915092	3300015242	Vadose Zone Soil	LLVFHLQRRGGEFAAKQGEFFAEQRRDYIVPNRNGDTTGGLDRVGAAASA*
Ga0182007_102047902	3300015262	Rhizosphere	DHLMVFRLQRRGGEFAANQGGFFAVQRRDCIAPNRNGDTIGGLDHVGAAASA*
Ga0182005_11942851	3300015265	Rhizosphere	LLVLHFQRRGGEFAAKPGEFLAEQRRDYVAPSRNGDTTGGLDRVGAASA*
Ga0134072_103695131	3300015357	Grasslands Soil	LLVFHLQRRGGEFAAKQGEFFAEQRRDYIVPSRNGYTTGGLDRIGAAASA*
Ga0132257_1040650111	3300015373	Arabidopsis Rhizosphere	LLVFHLQRRGGEFVAKQGELFAEQRRDYIVPNRNGDTTGGLDRVGAAAST*
Ga0163161_102639922	3300017792	Switchgrass Rhizosphere	LVLHLQRRGGEFAAKPGEFFAEQRRDYIAPSRNGDTTGGLDRVGAAASA
Ga0184634_101407062	3300018031	Groundwater Sediment	LLVFHLQRRGGEFVAKQDEFFAEQRRDYFAPSRNGDTTGGLDRVGAAASA
Ga0184619_101293031	3300018061	Groundwater Sediment	LLVFHLQRRGGEFAAKQGEFFAEQRRDYIVPSRSGDTTGGLDRVGAAASACTLPS
Ga0184640_103692181	3300018074	Groundwater Sediment	LLVFHLQRRGGEFVAKQGEFFAEQRRDYIVPNRNGDTTGGLDRVGAAAST
Ga0184609_100290101	3300018076	Groundwater Sediment	MQRRGGEFAAKQGEFFAEQRRDYIVPNRNGDTTGGLDRVGTAAST
Ga0184625_100751972	3300018081	Groundwater Sediment	LVFHLQRRGGEFVAKQDEFFAEQRRDYFAPSRNGDTTGGLDRVGAAASA
Ga0066655_100288121	3300018431	Grasslands Soil	LVFHLQRRGGEFAAKQGEFFAVQRRDYIAPSRNGDTTGGLDRVGAAASA
Ga0066667_111457461	3300018433	Grasslands Soil	LVFHLQRRGGEFAAKQGEFFAEQWRDYIAPRRNGDTTGGLDRVGAAASA
Ga0066662_114037522	3300018468	Grasslands Soil	LLVFHLQRRGGEFAAKQGEFFAVQRRDYIAPSRSGDTTGGLDRVGAAASA
Ga0066669_113606621	3300018482	Grasslands Soil	LVFHLQRRGGEFAAKQGEFFAEQWRDYIAPSRNGDTTGGLDRVGAAASA
Ga0210407_109821322	3300020579	Soil	LVFHLQRRGGEFAAKQGEFFAEQRRDYIVPNRNGDTTGGLDRVGAAASA
Ga0210400_111329362	3300021170	Soil	DHLLVFHLQRRGGEFAAKQGEFYAEQRRDCIAPSRNGDTTGGLDRVGAAASA
Ga0210410_101586921	3300021479	Soil	LLVFHLQRRGGEFAAKPGEFFAEQRRDYIAPSRNGDSTGGLDRVGAAASA
Ga0222623_100542991	3300022694	Groundwater Sediment	LVFHLQRRGGEFAAKQGEFFAEQRRDYIVPNRNGDTTGGLDRVGTAAST
Ga0207642_104468812	3300025899	Miscanthus Rhizosphere	LLVLHLQRRGGEFAAKPGEFLAEQRRDYVAPSRNGDTTGGLDRVGAASA
Ga0207680_101954872	3300025903	Switchgrass Rhizosphere	LVLHLQRRGGEFAAKPGEFLAEQRRDYVAPSRNGDTTGGLDRVGAASA
Ga0207680_102794792	3300025903	Switchgrass Rhizosphere	LHWLDDPLVAFHLQRRGGGFAANQGAFFAEQRRDCIAPNRNGDTIGGLDHVGDAASA
Ga0207649_102813612	3300025920	Corn Rhizosphere	LQRRGGEFAAKPGEFLAEQRRDYVAPSRNGDTTGGLDRVGAAASA
Ga0207690_100755462	3300025932	Corn Rhizosphere	LLVLHLQRRGGEFAAKPGKFLAEQRRDYIAPSRNGDTTGGLDRVGAAASA
Ga0207706_100443992	3300025933	Corn Rhizosphere	LVLHLQRRGGEFAAKQGEFFAEQRRDYIVPNRNGDTTGGLDRVGAAASA
Ga0207689_106568212	3300025942	Miscanthus Rhizosphere	RRGGEFAANQGAFFAEQRRDCIAPNRNGDTIGGLDHVGAAASA
Ga0207667_108398552	3300025949	Corn Rhizosphere	LHWLDDPLVAFHLQRRGGEFAASQGAFFAGQRHDCIAPNRNGDTTGGLDHVGAAASA
Ga0207708_101221293	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	LVLHLQRRGGEFAAKQGEFFAEQRRDYIAPSRNGDTTGGLDRVGAASA
Ga0207648_100756632	3300026089	Miscanthus Rhizosphere	LLVLQLQRRGGEFAAKPGEFLAEQRRDYVAPSRNGDTTGGLDRVGAASA
Ga0207675_1000274676	3300026118	Switchgrass Rhizosphere	LVLHLQRRGGEFAAKPGEFFAEQRRDYIAPSRNGDTTGGLDCVGAAASA
Ga0207683_101007752	3300026121	Miscanthus Rhizosphere	LLVFHLQRRGGEFAAKQGEFFAEQRRDYIAPSRNGDTTGGLDRVGAASA
Ga0209470_12874752	3300026324	Soil	AIRWLDDHLLVFHLQRRGGEFAAKQGEFFAVQRRDYIAPSRNGDTTGGLDRVGAAASA
Ga0209152_101000791	3300026325	Soil	LLVFHVQRRGGEFAAKQGEFFAEQRRDYIAPSRNGDTTGGLDRVGAAASA
Ga0209266_10673512	3300026327	Soil	LLVFHLQRRGGEFAAKQGEFFAVQRRDYIAPSRNGDTTGGLDRVGAAASA
Ga0209158_11919651	3300026333	Soil	LLVFHLQRRGGEFAAKQGEFFAEQRRDYIAPSRNGDTTGGLDRVGAAASA
Ga0209690_10446851	3300026524	Soil	LVFHLQRRGGEFAAKQGEFFAVQRRDYIAPSRSGDTTGGLDRVGAAASA
Ga0209161_101936152	3300026548	Soil	LVFHLQRRGGEFAAKQGEFFAEQWRDYTAPSRNGDTTGGLDRVGAAASA
Ga0209177_102508892	3300027775	Agricultural Soil	LLVLHLQRRGGEFAAKPGEFLAEQRRDYIAPSRNGDTTGGLDRVGAAASA
Ga0209813_100416502	3300027866	Populus Endosphere	LQRRGGEFAAKPGEFLAEQRRDYVAPSRNGDTTGGLDRVGAASA
Ga0209698_102685732	3300027911	Watersheds	LVFHLQRRGGEFAAKQGEFFAEQRRDYIAPSRNGDTMGGLNRVGAAASA
Ga0209069_100106863	3300027915	Watersheds	LLVFHLQRRGGEFAAKQGEFFAEQRRGYIVPNRNGDTTGGLDRVGAAASA
Ga0209069_106403121	3300027915	Watersheds	HLLVFHLQRRGGEFAAKQGEFFAEQRRDYIAPSRNGDTMGGLNRVGAAASA
Ga0268265_108306662	3300028380	Switchgrass Rhizosphere	LVLHLQRRGGEFAAKPGEFLAEQRRDYVAPSRNGDTTGGLDRVGAAASA
Ga0307293_101223081	3300028711	Soil	LVFHLQRRGGEFAAKQGEFFAEQRRDYIVPSRNGYTTGGLDRIGAAASA
Ga0308190_11194391	3300030993	Soil	LLVFHLQRRGGEFAAKQGEFFAEQRRDYIVPSRNGYTTGGLDRIGAAASA
Ga0308189_100188642	3300031058	Soil	LVFHLQRRGGEFVAKQGEFFAEQRRDYIVPNRNGDTTGGLDRVGAAAST
Ga0307495_101374332	3300031199	Soil	LLVFHLQRRGGEFVAKQGEFFAEQRRDYVVPNRNGDTTGGLDRVGAAASACTPPS
Ga0170818_1117484792	3300031474	Forest Soil	LVFHLQRRGGEFAAKQGEFFAEQRRDYIAPSRNGDTTGGLDRVGAAASP
Ga0307476_104403962	3300031715	Hardwood Forest Soil	LVFHLQRRGGEFAGKQGEFAEQRRDHIAPSRNGDTTGGLDRVGAAASA
Ga0307468_1003804822	3300031740	Hardwood Forest Soil	LLVFHLQRRGGEFAAKQGEFFAEQRRDYIVPSRNGDTTGGLDRVGAAASA
Ga0310907_101596392	3300031847	Soil	LVFHLQRRGGEFAAKQGEFFAEQRRDYIAPSRNGDTTGGLDCVGAAASA

Hidden Markov Model


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