Metagenome Family F048659

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F048659
Family Type	Metagenome
Number of Sequences	148
Average Sequence Length	81 residues
Representative Sequence	PVMTRAEMRAGLDMLPTWALEQKAAANRQVIAVMRERLAAGEAVARMYQEPGLAWLERQAEVAEELVAERQAASRAD
Number of Associated Samples	91
Number of Associated Scaffolds	148

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	20.41 %
% of genes near scaffold ends (potentially truncated)	60.81 %
% of genes from short scaffolds (< 2000 bps)	82.43 %
Associated GOLD sequencing projects	84
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.75

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (58.108 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (27.027 % of family members)
Environment Ontology (ENVO)	Unclassified (31.757 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (41.216 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 60.95% β-sheet: 0.00% Coil/Unstructured: 39.05%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.75
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.75
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Structural matches with SCOPe domains

SCOP family	SCOP domain	Representative PDB	TM-score
c.37.1.9: Motor proteins	d1qvia2	1qvi	0.67002
f.5.1.1: Outer membrane efflux proteins (OEP)	d1ek9a_	1ek9	0.65208
f.5.1.0: automated matches	d5azsa_	5azs	0.64618
a.127.1.2: HAL/PAL-like	d1w27a_	1w27	0.64239
a.127.1.2: HAL/PAL-like	d1y2ma_	1y2m	0.63558

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 148 Family Scaffolds
PF00589	Phage_integrase	3.38
PF09900	DUF2127	2.70
PF02371	Transposase_20	2.70
PF00239	Resolvase	2.70
PF00440	TetR_N	2.03
PF02796	HTH_7	2.03
PF10604	Polyketide_cyc2	2.03
PF00248	Aldo_ket_red	1.35
PF13683	rve_3	1.35
PF01510	Amidase_2	1.35
PF13160	DUF3995	1.35
PF01844	HNH	1.35
PF00702	Hydrolase	1.35
PF00583	Acetyltransf_1	0.68
PF13592	HTH_33	0.68
PF07411	DUF1508	0.68
PF04542	Sigma70_r2	0.68
PF01656	CbiA	0.68
PF00805	Pentapeptide	0.68
PF12728	HTH_17	0.68
PF04264	YceI	0.68
PF01471	PG_binding_1	0.68
PF06271	RDD	0.68
PF13250	DUF4041	0.68
PF01638	HxlR	0.68
PF14329	DUF4386	0.68
PF13936	HTH_38	0.68
PF13358	DDE_3	0.68
PF10012	DUF2255	0.68
PF01872	RibD_C	0.68
PF08241	Methyltransf_11	0.68
PF07883	Cupin_2	0.68
PF01906	YbjQ_1	0.68

COG ID	Name	Functional Category	% Frequency in 148 Family Scaffolds
COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	Replication, recombination and repair [L]	2.70
COG2452	Predicted site-specific integrase-resolvase	Mobilome: prophages, transposons [X]	2.70
COG3547	Transposase	Mobilome: prophages, transposons [X]	2.70
COG0262	Dihydrofolate reductase	Coenzyme transport and metabolism [H]	0.68
COG0393	Uncharacterized pentameric protein YbjQ, UPF0145 family	Function unknown [S]	0.68
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	0.68
COG1191	DNA-directed RNA polymerase specialized sigma subunit	Transcription [K]	0.68
COG1357	Uncharacterized conserved protein YjbI, contains pentapeptide repeats	Function unknown [S]	0.68
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	0.68
COG1714	Uncharacterized membrane protein YckC, RDD family	Function unknown [S]	0.68
COG1733	DNA-binding transcriptional regulator, HxlR family	Transcription [K]	0.68
COG1985	Pyrimidine reductase, riboflavin biosynthesis	Coenzyme transport and metabolism [H]	0.68
COG2353	Polyisoprenoid-binding periplasmic protein YceI	General function prediction only [R]	0.68
COG3422	Uncharacterized conserved protein YegP, UPF0339 family	Function unknown [S]	0.68
COG4941	Predicted RNA polymerase sigma factor, contains C-terminal TPR domain	Transcription [K]	0.68

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.11 %
All Organisms	root	All Organisms	41.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.11 %
cellular organisms	root	All Organisms → cellular organisms	41.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.11 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	41.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.11 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	27.70 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	0.68 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.11 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	25.00 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1.35 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.68 %
Candidatus Dormibacteraeota	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Candidatus Dormibacteraeota	0.68 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.11 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	13.51 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	1.35 %
unclassified Candidatus Dormibacteraeota	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Candidatus Dormibacteraeota → unclassified Candidatus Dormibacteraeota	0.68 %
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	0.68 %
Chloroflexia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia	0.68 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.68 %
Acidimicrobiia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia	0.68 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.11 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1.35 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	1.35 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	1.35 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.68 %
unclassified Chloroflexia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia	0.68 %
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	0.68 %
Syntrophorhabdales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophorhabdales	0.68 %
Candidatus Dormibacteraeota bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Candidatus Dormibacteraeota → unclassified Candidatus Dormibacteraeota → Candidatus Dormibacteraeota bacterium	0.68 %
Frankiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales	0.68 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.68 %
unclassified Acidimicrobiia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.11 %
unclassified Solirubrobacterales	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales	1.35 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	1.35 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	1.35 %
Chloroflexia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium	0.68 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.68 %
Acidimicrobiia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	0.68 %
Frankiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae	0.68 %
Syntrophorhabdaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophorhabdales → Syntrophorhabdaceae	0.68 %
Microbacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae	0.68 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.68 %
Candidatus Dormibacteraeota bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Candidatus Dormibacteraeota → unclassified Candidatus Dormibacteraeota → Candidatus Dormibacteraeota bacterium	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.11 %
Solirubrobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	1.35 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	1.35 %
unclassified Syntrophorhabdaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophorhabdales → Syntrophorhabdaceae → unclassified Syntrophorhabdaceae	0.68 %
Cryobacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Cryobacterium	0.68 %
Amycolatopsis	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis	0.68 %
Frankia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia	0.68 %
Chloroflexia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium	0.68 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.68 %
Acidimicrobiia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	0.68 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.68 %
Candidatus Dormibacteraeota bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Candidatus Dormibacteraeota → unclassified Candidatus Dormibacteraeota → Candidatus Dormibacteraeota bacterium	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.11 %
Solirubrobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	1.35 %
Syntrophorhabdaceae bacterium PtaU1.Bin034	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophorhabdales → Syntrophorhabdaceae → unclassified Syntrophorhabdaceae → Syntrophorhabdaceae bacterium PtaU1.Bin034	0.68 %
Amycolatopsis aidingensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis → Amycolatopsis aidingensis	0.68 %
unclassified Frankia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → unclassified Frankia	0.68 %
unclassified Streptomyces	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces	0.68 %
unclassified Cryobacterium	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Cryobacterium → unclassified Cryobacterium	0.68 %
Streptomyces hirsutus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces hirsutus	0.68 %
Chloroflexia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium	0.68 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.68 %
Acidimicrobiia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	0.68 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.68 %
Candidatus Dormibacteraeota bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Candidatus Dormibacteraeota → unclassified Candidatus Dormibacteraeota → Candidatus Dormibacteraeota bacterium	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.11 %
Solirubrobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	1.35 %
Cryobacterium sp. TMT2-15-1	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Cryobacterium → unclassified Cryobacterium → Cryobacterium sp. TMT2-15-1	0.68 %
Streptomyces sp. G1	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. G1	0.68 %
Frankia sp. EUN1f	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → unclassified Frankia → Frankia sp. EUN1f	0.68 %
Syntrophorhabdaceae bacterium PtaU1.Bin034	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophorhabdales → Syntrophorhabdaceae → unclassified Syntrophorhabdaceae → Syntrophorhabdaceae bacterium PtaU1.Bin034	0.68 %
Amycolatopsis aidingensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis → Amycolatopsis aidingensis	0.68 %
Streptomyces hirsutus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces hirsutus	0.68 %
Chloroflexia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium	0.68 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.68 %
Acidimicrobiia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	0.68 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.68 %
Candidatus Dormibacteraeota bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Candidatus Dormibacteraeota → unclassified Candidatus Dormibacteraeota → Candidatus Dormibacteraeota bacterium	0.68 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2067725002\|GPICC_F5MS3JC01B6UQD	Not Available	508	Open in IMG/M
3300000858\|JGI10213J12805_10892328	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	692	Open in IMG/M
3300001431\|F14TB_100233218	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	870	Open in IMG/M
3300003373\|JGI25407J50210_10014595	All Organisms → cellular organisms → Bacteria	2025	Open in IMG/M
3300004463\|Ga0063356_103602619	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	667	Open in IMG/M
3300005347\|Ga0070668_101202831	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → unclassified Frankia → Frankia sp. EUN1f	687	Open in IMG/M
3300005562\|Ga0058697_10219769	Not Available	870	Open in IMG/M
3300005981\|Ga0081538_10013003	All Organisms → cellular organisms → Bacteria	6622	Open in IMG/M
3300005981\|Ga0081538_10049993	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2531	Open in IMG/M
3300006049\|Ga0075417_10013000	All Organisms → cellular organisms → Bacteria	3148	Open in IMG/M
3300006623\|Ga0101568_11237397	Not Available	509	Open in IMG/M
3300006844\|Ga0075428_100913740	Not Available	931	Open in IMG/M
3300006847\|Ga0075431_100870694	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	871	Open in IMG/M
3300006847\|Ga0075431_101685602	Not Available	591	Open in IMG/M
3300006854\|Ga0075425_100536039	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1347	Open in IMG/M
3300006871\|Ga0075434_102130878	Not Available	565	Open in IMG/M
3300006876\|Ga0079217_11178416	Not Available	581	Open in IMG/M
3300009094\|Ga0111539_13368249	Not Available	514	Open in IMG/M
3300009147\|Ga0114129_10458961	Not Available	1670	Open in IMG/M
3300009147\|Ga0114129_13213694	Not Available	531	Open in IMG/M
3300009789\|Ga0126307_10076593	All Organisms → cellular organisms → Bacteria	2637	Open in IMG/M
3300009789\|Ga0126307_10142222	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1918	Open in IMG/M
3300009789\|Ga0126307_10218318	Not Available	1531	Open in IMG/M
3300009789\|Ga0126307_10287849	All Organisms → cellular organisms → Bacteria	1322	Open in IMG/M
3300009789\|Ga0126307_10464208	Not Available	1022	Open in IMG/M
3300009789\|Ga0126307_11118114	Not Available	637	Open in IMG/M
3300009789\|Ga0126307_11448325	Not Available	557	Open in IMG/M
3300009789\|Ga0126307_11549222	Not Available	538	Open in IMG/M
3300009811\|Ga0105084_1018758	Not Available	1133	Open in IMG/M
3300009815\|Ga0105070_1001308	All Organisms → cellular organisms → Bacteria	3311	Open in IMG/M
3300009816\|Ga0105076_1054967	Not Available	726	Open in IMG/M
3300009817\|Ga0105062_1074585	Not Available	647	Open in IMG/M
3300009819\|Ga0105087_1062507	Not Available	632	Open in IMG/M
3300009821\|Ga0105064_1130594	Not Available	531	Open in IMG/M
3300009836\|Ga0105068_1071411	Not Available	649	Open in IMG/M
3300009840\|Ga0126313_10106160	Not Available	2073	Open in IMG/M
3300009840\|Ga0126313_10120100	All Organisms → cellular organisms → Bacteria	1955	Open in IMG/M
3300009840\|Ga0126313_11158069	Not Available	637	Open in IMG/M
3300010036\|Ga0126305_10058305	Not Available	2212	Open in IMG/M
3300010038\|Ga0126315_10920264	All Organisms → cellular organisms → Bacteria	582	Open in IMG/M
3300010038\|Ga0126315_11134031	Not Available	529	Open in IMG/M
3300010038\|Ga0126315_11268710	Not Available	501	Open in IMG/M
3300010042\|Ga0126314_10071615	All Organisms → cellular organisms → Bacteria	2305	Open in IMG/M
3300010042\|Ga0126314_10090756	Not Available	2061	Open in IMG/M
3300010042\|Ga0126314_10689942	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	748	Open in IMG/M
3300010045\|Ga0126311_10406823	All Organisms → cellular organisms → Bacteria	1048	Open in IMG/M
3300010166\|Ga0126306_10182455	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophorhabdales → Syntrophorhabdaceae → unclassified Syntrophorhabdaceae → Syntrophorhabdaceae bacterium PtaU1.Bin034	1577	Open in IMG/M
3300010166\|Ga0126306_11190439	Not Available	626	Open in IMG/M
3300012938\|Ga0162651_100056602	Not Available	626	Open in IMG/M
3300013306\|Ga0163162_10225449	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2004	Open in IMG/M
3300014487\|Ga0182000_10000866	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	5425	Open in IMG/M
3300014487\|Ga0182000_10026350	Not Available	1584	Open in IMG/M
3300014487\|Ga0182000_10288512	Not Available	678	Open in IMG/M
3300017792\|Ga0163161_11480596	Not Available	595	Open in IMG/M
3300018027\|Ga0184605_10086246	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1374	Open in IMG/M
3300018028\|Ga0184608_10039293	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1820	Open in IMG/M
3300018051\|Ga0184620_10235711	Not Available	613	Open in IMG/M
3300018078\|Ga0184612_10098940	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium	1526	Open in IMG/M
3300018081\|Ga0184625_10150718	Not Available	1215	Open in IMG/M
3300018465\|Ga0190269_11879949	Not Available	515	Open in IMG/M
3300018466\|Ga0190268_10114058	Not Available	1292	Open in IMG/M
3300018466\|Ga0190268_10896878	Not Available	689	Open in IMG/M
3300018476\|Ga0190274_12843373	Not Available	580	Open in IMG/M
3300019869\|Ga0193705_1050600	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	858	Open in IMG/M
3300021078\|Ga0210381_10233033	Not Available	650	Open in IMG/M
3300021078\|Ga0210381_10394939	Not Available	510	Open in IMG/M
3300022534\|Ga0224452_1025716	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. G1	1670	Open in IMG/M
3300022534\|Ga0224452_1193034	Not Available	626	Open in IMG/M
3300022694\|Ga0222623_10072217	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1337	Open in IMG/M
3300025972\|Ga0207668_11249884	All Organisms → cellular organisms → Bacteria	668	Open in IMG/M
3300026790\|Ga0208710_100347	All Organisms → cellular organisms → Bacteria	2203	Open in IMG/M
3300027068\|Ga0209898_1004069	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	1673	Open in IMG/M
3300027490\|Ga0209899_1006094	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2766	Open in IMG/M
3300027718\|Ga0209795_10044421	All Organisms → cellular organisms → Bacteria	1376	Open in IMG/M
3300027873\|Ga0209814_10011563	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces hirsutus	3479	Open in IMG/M
3300027873\|Ga0209814_10347779	Not Available	648	Open in IMG/M
3300027880\|Ga0209481_10191111	Not Available	1021	Open in IMG/M
3300027907\|Ga0207428_10896786	Not Available	626	Open in IMG/M
3300028708\|Ga0307295_10220132	Not Available	541	Open in IMG/M
3300028712\|Ga0307285_10050283	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Candidatus Dormibacteraeota → unclassified Candidatus Dormibacteraeota → Candidatus Dormibacteraeota bacterium	1038	Open in IMG/M
3300028712\|Ga0307285_10239784	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	514	Open in IMG/M
3300028717\|Ga0307298_10159325	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	657	Open in IMG/M
3300028719\|Ga0307301_10046328	All Organisms → cellular organisms → Bacteria	1332	Open in IMG/M
3300028720\|Ga0307317_10221837	Not Available	638	Open in IMG/M
3300028721\|Ga0307315_10285365	Not Available	522	Open in IMG/M
3300028722\|Ga0307319_10020709	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2013	Open in IMG/M
3300028722\|Ga0307319_10038227	Not Available	1495	Open in IMG/M
3300028722\|Ga0307319_10087445	Not Available	993	Open in IMG/M
3300028722\|Ga0307319_10250975	Not Available	582	Open in IMG/M
3300028722\|Ga0307319_10268558	Not Available	562	Open in IMG/M
3300028722\|Ga0307319_10310281	Not Available	522	Open in IMG/M
3300028755\|Ga0307316_10100208	All Organisms → cellular organisms → Bacteria	1010	Open in IMG/M
3300028755\|Ga0307316_10374999	Not Available	525	Open in IMG/M
3300028771\|Ga0307320_10033724	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1868	Open in IMG/M
3300028771\|Ga0307320_10084076	Not Available	1199	Open in IMG/M
3300028771\|Ga0307320_10349419	Not Available	590	Open in IMG/M
3300028771\|Ga0307320_10440986	Not Available	524	Open in IMG/M
3300028791\|Ga0307290_10402801	Not Available	501	Open in IMG/M
3300028796\|Ga0307287_10039762	Not Available	1703	Open in IMG/M
3300028796\|Ga0307287_10119404	Not Available	998	Open in IMG/M
3300028796\|Ga0307287_10380787	Not Available	531	Open in IMG/M
3300028807\|Ga0307305_10062421	All Organisms → cellular organisms → Bacteria	1717	Open in IMG/M
3300028814\|Ga0307302_10009045	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4456	Open in IMG/M
3300028814\|Ga0307302_10348021	Not Available	731	Open in IMG/M
3300028819\|Ga0307296_10062165	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1980	Open in IMG/M
3300028819\|Ga0307296_10479629	Not Available	680	Open in IMG/M
3300028828\|Ga0307312_10067641	All Organisms → cellular organisms → Bacteria	2162	Open in IMG/M
3300028876\|Ga0307286_10220047	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Cryobacterium → unclassified Cryobacterium → Cryobacterium sp. TMT2-15-1	691	Open in IMG/M
3300028878\|Ga0307278_10161244	Not Available	1003	Open in IMG/M
3300028880\|Ga0307300_10072884	Not Available	1003	Open in IMG/M
3300028884\|Ga0307308_10363533	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	693	Open in IMG/M
3300030499\|Ga0268259_10168672	Not Available	529	Open in IMG/M
3300030510\|Ga0268243_1018773	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1351	Open in IMG/M
3300031548\|Ga0307408_100078587	All Organisms → cellular organisms → Bacteria	2460	Open in IMG/M
3300031548\|Ga0307408_101148976	Not Available	722	Open in IMG/M
3300031548\|Ga0307408_101359122	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis → Amycolatopsis aidingensis	667	Open in IMG/M
3300031548\|Ga0307408_101596345	Not Available	619	Open in IMG/M
3300031548\|Ga0307408_102196858	Not Available	533	Open in IMG/M
3300031731\|Ga0307405_10031509	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3123	Open in IMG/M
3300031731\|Ga0307405_10110770	All Organisms → cellular organisms → Bacteria	1859	Open in IMG/M
3300031731\|Ga0307405_10202235	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1443	Open in IMG/M
3300031731\|Ga0307405_11479801	Not Available	596	Open in IMG/M
3300031731\|Ga0307405_11703331	Not Available	558	Open in IMG/M
3300031824\|Ga0307413_10142162	Not Available	1660	Open in IMG/M
3300031824\|Ga0307413_11975368	Not Available	525	Open in IMG/M
3300031852\|Ga0307410_10092975	Not Available	2145	Open in IMG/M
3300031852\|Ga0307410_10535037	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	969	Open in IMG/M
3300031852\|Ga0307410_10781335	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	811	Open in IMG/M
3300031852\|Ga0307410_11466932	Not Available	600	Open in IMG/M
3300031901\|Ga0307406_10086878	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	2095	Open in IMG/M
3300031903\|Ga0307407_10547778	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	855	Open in IMG/M
3300031903\|Ga0307407_10850168	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	697	Open in IMG/M
3300031911\|Ga0307412_10339715	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1201	Open in IMG/M
3300031911\|Ga0307412_11146231	Not Available	694	Open in IMG/M
3300031995\|Ga0307409_100091423	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2494	Open in IMG/M
3300031995\|Ga0307409_101993170	Not Available	610	Open in IMG/M
3300031995\|Ga0307409_102388827	Not Available	558	Open in IMG/M
3300031996\|Ga0308176_12558325	Not Available	544	Open in IMG/M
3300032002\|Ga0307416_100046050	Not Available	3439	Open in IMG/M
3300032002\|Ga0307416_100105455	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2467	Open in IMG/M
3300032004\|Ga0307414_10984894	Not Available	776	Open in IMG/M
3300032004\|Ga0307414_11844084	Not Available	564	Open in IMG/M
3300032005\|Ga0307411_10293719	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1300	Open in IMG/M
3300032005\|Ga0307411_10527018	Not Available	1004	Open in IMG/M
3300032126\|Ga0307415_100467539	Not Available	1094	Open in IMG/M
3300032159\|Ga0268251_10085155	Not Available	1102	Open in IMG/M
3300032159\|Ga0268251_10130584	Not Available	928	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	61.49%
Host-Associated	Host-Associated	38.51%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	54.73%
Plants	Host-Associated → Plants	38.51%
Aquatic	Environmental → Aquatic	6.76%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	54.05%
Rhizosphere	Host-Associated → Plants → Rhizosphere	31.08%
Sediment	Environmental → Aquatic → Sediment	5.41%
Phylloplane	Host-Associated → Plants → Phylloplane	2.70%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.03%
Roots	Host-Associated → Plants → Roots	2.03%
Freshwater	Environmental → Aquatic → Freshwater	1.35%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	0.68%
Phyllosphere	Host-Associated → Plants → Phyllosphere	0.68%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	46.62%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	29.73%
Sand	Environmental → Terrestrial → Soil → Sand	6.08%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	5.41%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified	2.70%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.03%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	2.03%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.35%
Loam	Environmental → Terrestrial → Soil → Loam	1.35%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.35%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	0.68%
Phylloplane/Leaf Surface	Host-Associated → Plants → Phyllosphere → Phylloplane/Leaf Surface	0.68%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	43.92%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	29.73%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	6.08%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	5.41%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified	2.70%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.03%
Unclassified	Host-Associated → Plants → Roots → Rhizosphere → Unclassified	2.03%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.35%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.35%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.35%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.35%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.68%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.68%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	0.68%
Unclassified	Host-Associated → Plants → Phyllosphere → Phylloplane/Leaf Surface → Unclassified	0.68%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	27.03%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	20.95%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	14.19%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	8.78%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	6.08%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	3.38%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.70%
Agave	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified → Agave	2.70%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	2.03%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Unclassified → Tabebuia Heterophylla Rhizosphere	2.03%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	1.35%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.35%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.35%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.35%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.35%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.68%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.68%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	0.68%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.68%
Agave	Host-Associated → Plants → Phyllosphere → Phylloplane/Leaf Surface → Unclassified → Agave	0.68%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2067725002	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000858	Soil microbial communities from Great Prairies - Wisconsin Native Prairie soil	Environmental	Open in IMG/M
3300001431	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.4TB clc assemly	Environmental	Open in IMG/M
3300003373	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1	Host-Associated	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005562	Agave microbial communities from Guanajuato, Mexico - As.Ma.e	Host-Associated	Open in IMG/M
3300005981	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1	Host-Associated	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006623	Soil microbial communities from the Leymus chinensis steppe, China - after adding 5.25 g N m- 2, yr-1	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006876	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009789	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28	Environmental	Open in IMG/M
3300009811	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_20_30	Environmental	Open in IMG/M
3300009815	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_0_10	Environmental	Open in IMG/M
3300009816	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_0_10	Environmental	Open in IMG/M
3300009817	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_10_20	Environmental	Open in IMG/M
3300009819	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S2_40_50	Environmental	Open in IMG/M
3300009821	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_20_30	Environmental	Open in IMG/M
3300009836	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_10_20	Environmental	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010036	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26	Environmental	Open in IMG/M
3300010038	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106	Environmental	Open in IMG/M
3300010042	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105B	Environmental	Open in IMG/M
3300010045	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61	Environmental	Open in IMG/M
3300010166	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27	Environmental	Open in IMG/M
3300012938	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t2i015	Environmental	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300014487	Bulk soil microbial communities from Mexico - Magueyal (Ma) metaG	Environmental	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300018027	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coex	Environmental	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018051	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_b1	Environmental	Open in IMG/M
3300018078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_coex	Environmental	Open in IMG/M
3300018081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1	Environmental	Open in IMG/M
3300018465	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 IS	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300019869	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3m2	Environmental	Open in IMG/M
3300021078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_coex redo	Environmental	Open in IMG/M
3300022534	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_b1	Environmental	Open in IMG/M
3300022694	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_coex	Environmental	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026790	Grasslands soil microbial communities from Gorham, Kansas, USA that are Nitrogen fertilized -NN607 (SPAdes)	Environmental	Open in IMG/M
3300027068	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N2_50_60 (SPAdes)	Environmental	Open in IMG/M
3300027490	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_0_10 (SPAdes)	Environmental	Open in IMG/M
3300027718	Agave microbial communities from Guanajuato, Mexico - Or.Ma.rz (SPAdes)	Host-Associated	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027880	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 (SPAdes)	Host-Associated	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300028708	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_152	Environmental	Open in IMG/M
3300028712	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_139	Environmental	Open in IMG/M
3300028717	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_158	Environmental	Open in IMG/M
3300028719	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_182	Environmental	Open in IMG/M
3300028720	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_357	Environmental	Open in IMG/M
3300028721	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_355	Environmental	Open in IMG/M
3300028722	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_368	Environmental	Open in IMG/M
3300028744	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_367	Environmental	Open in IMG/M
3300028755	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_356	Environmental	Open in IMG/M
3300028771	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_369	Environmental	Open in IMG/M
3300028791	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_144	Environmental	Open in IMG/M
3300028796	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_141	Environmental	Open in IMG/M
3300028807	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_186	Environmental	Open in IMG/M
3300028814	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183	Environmental	Open in IMG/M
3300028819	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300028876	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_140	Environmental	Open in IMG/M
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental	Open in IMG/M
3300028880	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_181	Environmental	Open in IMG/M
3300028884	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195	Environmental	Open in IMG/M
3300030499	Agave microbial communities from Guanajuato, Mexico - As.Ma.rz (v2)	Host-Associated	Open in IMG/M
3300030510	Bulk soil microbial communities from Mexico - Magueyal (Ma) metaG (v2)	Environmental	Open in IMG/M
3300031548	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3	Host-Associated	Open in IMG/M
3300031731	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1	Host-Associated	Open in IMG/M
3300031824	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2	Host-Associated	Open in IMG/M
3300031852	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3	Host-Associated	Open in IMG/M
3300031901	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2	Host-Associated	Open in IMG/M
3300031903	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1	Host-Associated	Open in IMG/M
3300031911	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1	Host-Associated	Open in IMG/M
3300031995	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2	Host-Associated	Open in IMG/M
3300031996	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2	Environmental	Open in IMG/M
3300032002	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3	Host-Associated	Open in IMG/M
3300032004	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3	Host-Associated	Open in IMG/M
3300032005	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1	Host-Associated	Open in IMG/M
3300032126	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2	Host-Associated	Open in IMG/M
3300032159	Agave microbial communities from Guanajuato, Mexico - As.Ma.e (v2)	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GPICC_02568700	2067725002	Soil	PRRRPYPAMTRAQMRESLALPPSWALQQKAAADRQLIVITRQRLAAGEEVAHMYQEPGLAWLERQAEAAERLLAERQADGRRD
JGI10213J12805_108923281	3300000858	Soil	GPGPYPAMTRAEMRESLELLPSWVLDQKAAANRQVIAVMRERLAAGEEVARMYQEPGLAWLERQAEAAEGLLAERQAADHRD*
F14TB_1002332181	3300001431	Soil	RPRPRQRPYPVMTGAQMRAGLDLLPTWASEQSAANRHVIAVMRRRLAAGEEVARMYKPGLAWLERQAEIAEDLVADGGRH*
JGI25407J50210_100145953	3300003373	Tabebuia Heterophylla Rhizosphere	MRAGLDLLPTWALEQKAAANRQVIAVMRERLAAGEQVARMYQEPGLAWLERQAQTAEELITERRNQEQHVD*
Ga0063356_1036026192	3300004463	Arabidopsis Thaliana Rhizosphere	MTRAETRECLALLPSWPLQRKAATSRQVIAVMRQRSAAGVEVARMYQEPGLAWPEQQAEAADDLLAERQATDHSDGCPR
Ga0070668_1012028311	3300005347	Switchgrass Rhizosphere	VLMCADCQAARGQGSGPHPVMTRAEMRAGLDLLPTWALEQKAAANRQLIAAMRRRLAAGEQAAGMYQGPGLAWLERQAEIGEDLVAERQAAAKRHR*
Ga0058697_102197691	3300005562	Agave	PVMTRAEMRTGLDLLPTWALKQKAAANRELIAAMRLRLAAGEQVARMYQEPGLAWLERQAEVAEELVAQRKRTTENRPGR*
Ga0081538_1001300313	3300005981	Tabebuia Heterophylla Rhizosphere	MTRAEMRAGLDLLPTWALEQKAAANRQVIAVMRERLAAGEQVARMYQEPGLAWLERQAQTAEELITERRNQEQHVD*
Ga0081538_100499934	3300005981	Tabebuia Heterophylla Rhizosphere	MCGDCQAARGHNPSPYPTVTRAELRAGLDLLPTWALEQKAAANRQKIKAMRERLAAGEQVARMYQGPGLAWLERQAEVAEELVKERQAATREGSG*
Ga0075417_100130002	3300006049	Populus Rhizosphere	MTRAQMRESLALPPSWALQQKAAANRQLIVITRQRLAAGEEVAHMYQEPGLAWLERQAEAAERLLAERQADGRRD*
Ga0101568_112373971	3300006623	Soil	MTRAEMGAGLDLFPTWALGQKAAANRQVIAAMHQRLAAGQEVARMYQEPGLAWLERQAEVAEELVALRKRTTENRPGS*
Ga0075428_1009137401	3300006844	Populus Rhizosphere	RGHGSGPYPVMTRAQMRAGLDLLPTWALEQKATANRQVITAMRHRLAAGELVARMYQEPGLAWLERQAEVAEELVAERKRMAEHRPGL*
Ga0075431_1008706941	3300006847	Populus Rhizosphere	LLPTWALEQKAAANRHVIAVMRQRLAAGEEVARMYQEPGLAWLERQAEVAEDLVVGRRAALKTPPPMS*
Ga0075431_1016856021	3300006847	Populus Rhizosphere	LMCADCQAARGHGSGPYPVMTRAQMRAGLDLLPTWALEQKAAANRQLPAAMRRRAAAGEQVARMYQEPGLAWLERQAEIAEDLVAERQAAAKLHR*
Ga0075425_1005360393	3300006854	Populus Rhizosphere	GPYPVMTRSEMRAGLDLMPTWALEQKATANRQVVAIMRERLAAGEQVARMYQEPGLAWLERQAEAAEDLVTGRHTAAKRHR*
Ga0075434_1021308781	3300006871	Populus Rhizosphere	ALPPSWALQQKAAANRQLIVITRQRLAAGEEVAHMYQEPGLAWLERQAEAAERLLAERQADGRRD*
Ga0079217_111784161	3300006876	Agricultural Soil	MRAGLDLLPTCALELKAVANRQRISVIRKRLAAGEQVARMYQEPGLAWLERQAEVAEELVAQRKRTPENRPGHLKGSG
Ga0111539_133682492	3300009094	Populus Rhizosphere	MRESLELLPSWVLAQKAAANHQVVAVMRERLAAGEEVARMYQEPGLAWLERQAEAAEDLLAKRQAADQRE*
Ga0114129_104589612	3300009147	Populus Rhizosphere	FTVLMCVDCQAARGYGSGPLSVMTRAEMRAGLDLMATWALEQKAAANRQVIDIMRRRLAVGEQVARMYQEQGLSWLERQAEVAEDLVAERQAAAKRHR*
Ga0114129_132136941	3300009147	Populus Rhizosphere	MCADCQAARGHGSGPYPVMTRAEMRAGLELLPTWAREQKAAANPQVIAVMGQRLAAGEQVARMYQEPGLAWLKRQAEVAEELVAGRKRTAENHPKS*
Ga0126307_100765932	3300009789	Serpentine Soil	MRAGLELLLTWVLEQKAAANRQVIAVMRQRLTAGEQVARMYQEPGLAWLERQAEVAEGLVAKRQAGNRDH*
Ga0126307_101422222	3300009789	Serpentine Soil	MARAEMRAGLDLLPTWALEQEVAANRQVIAVMRSRLAAGEEVSRMYQEPGLAWRSSQAEVAEELITDRRAGGRHL*
Ga0126307_102183182	3300009789	Serpentine Soil	MTRAEMRAGLDMLPTWALEQKAAANRQVIAVMRKRLAAGEAVARMYQEPGLAWLERQAEVAEELVAERQAASRAD*
Ga0126307_102878493	3300009789	Serpentine Soil	MRESLALLPSWVLAQKAAANRQLIAVMRQRLAAGEQVARMYQKPGLAWLECQAEAAEQLLGERQACEQN*
Ga0126307_104642081	3300009789	Serpentine Soil	TVLMCADCQAARGHGSGPYSVMTRAGMRTGLDLLPTWVLEHKAAANRQVIAVMRQRLAAGEQVARMYPEPGLAWLERQAEVAEELVARRKRATENRPGR*
Ga0126307_111181141	3300009789	Serpentine Soil	MCADCQAARGRGSGPYPVMTRAEMRAGLDLLATWALEQKATANRQLIAAMRQRLAAGGQVARMYQVPGLTWLERQAEVAEKLVAERKRT*
Ga0126307_114483252	3300009789	Serpentine Soil	PYPVMTRADMRASLDLLPTWVLEQKAAANRQVIVVMRERLAAGEEVARMYQEPGLAWLERQAEAAEDLIAERRTAGRHAD*
Ga0126307_115492221	3300009789	Serpentine Soil	DDPAEMRAGLDLMATWALEQKAANRQLIAAMRRRLAAGEQVARMYQEPGLAWLERQAEVAEELVAQRKRTTENRPGS*
Ga0105084_10187581	3300009811	Groundwater Sand	MLLMCGDCQAARGHDAAPYPAVTRAELRAGLDLLPTWALAQKAAANRQQIEQMRERLAAGEEVARMYQEPGLAWLERQAEVADDLVKERPAATRDETD*
Ga0105070_10013083	3300009815	Groundwater Sand	MLLMCGDCQAARGHDAAPYPAVTRAELRAGLDLLPTWALAQKAAANRQQIEQMRERLAAGEEVARMYQEPGLAWLERQAEVAEDLVKERPAATRDETD*
Ga0105076_10549671	3300009816	Groundwater Sand	MLLMCGDCQAARGHDAAPYPAVTRAELRAGLDLLPTWALAQKAAANRQQIEQMRERLAAGETAARMYQEPGLAWLERQAEVAEELVRERQAAARDESG*
Ga0105062_10745851	3300009817	Groundwater Sand	CQAARGHDAAPYPAVTRAELRAGLDLLPTWALAQKAAANRQQIEQMRERLAAGEEVARMYQEPGLAWLERQAEVAEDLVKERPAATRDETD*
Ga0105087_10625072	3300009819	Groundwater Sand	MLLMCGDCQAARGHDAAPYPAVTRAELRAGLDLLPTWALAQKAAANRQQIEQMRERLAAGEEVARMYQEPGLAWLERQAEVAE
Ga0105064_11305941	3300009821	Groundwater Sand	MCGDCQAARGHDSAPYPAVTRTELRAGLDLLPTWALAQKAAANRQQIERMRERLAAGETAARMYQEPGLAWLERQAEVAEELVRERQAA
Ga0105068_10714111	3300009836	Groundwater Sand	GGAFMLLMCGDCQAARGHDAAPYPAVTRAELRAGLDLLPTWALAQKAAANRQQIEQMRERLAAGEEVARMYQEPGLAWLERQAEVAEDLVKERPAATRDETD*
Ga0126313_101061604	3300009840	Serpentine Soil	LGLHYPSPYPPMTPAEMRESLKLLPSWVLAQKAAANRQVIAVMRQRLAAGEQVARMYQEPGLAWLERQAEAAEQLLAERQADDQNQ*
Ga0126313_101201002	3300009840	Serpentine Soil	MRAGLDLLPTWALEQKAAANRQVIAIMRQRLAAGEQAARMYQEPGLAWLERQAEVIEELVAQRKRTAENRPGS*
Ga0126313_111580691	3300009840	Serpentine Soil	MYTDCQATRGHGSGPYPVMTRAEMRAGLDLLPTWALEQKAAANRQLIAVMRQRLATGEQVARMHQEPGLAWLERQAKAAEDLVAERQAATKRHR*
Ga0126305_100583053	3300010036	Serpentine Soil	ARGHGSGPYPVMTRAEMRAGLELLPTWVLEQKAAANRQLIAVMRQRLTAGEQVARMYQEPGLAWLERQAEVAEGLVAKRQAGNRDH*
Ga0126315_109202641	3300010038	Serpentine Soil	MTRAEMRESLELLPSWVLGHKAAANRQLIAVMRQRLAAGEQVARMYQEPGLAWLERQAEAAEGLLAERQADG*
Ga0126315_111340312	3300010038	Serpentine Soil	VMTRAEMRAGLDMLPTWALEQKAAANRQVIAVMRKRLAAGEAVARMYQEPGLAWLERQAEVAEELVAERQAASRAD*
Ga0126315_112687101	3300010038	Serpentine Soil	MTRAEMRAGLELLPTWALEQNAAANRQIIGVMRSRLAAGEEVARMYQEPGLAWLERQAEVAEEVITDRRAGGRHL*
Ga0126314_100716152	3300010042	Serpentine Soil	MRAGLELLPTWVLEQKAAANRQLIAVMRQRLTAGEQVARMYQEPGLAWLERQAEVAEGLVAKRQAGNRDH*
Ga0126314_100907563	3300010042	Serpentine Soil	MLPTWALEQKAAANRQVIAVMRERLAAGEAVARMYQEPGLAWLERQAEVAEELVAERQAASRAD*
Ga0126314_106899423	3300010042	Serpentine Soil	EMRASLDLLPTWALEQKAAANRQVIAIMRQRLAIGEEAARMYQEPGLAWLERQAEAAEDLIAERGTAGRHTD*
Ga0126311_104068232	3300010045	Serpentine Soil	MRAGLELLPTWVLEQKAAANRQVIAVMRQRLTAGEQVARMYQEPGLAWLERQAEVAEGLVAKRQAGNRDH*
Ga0126306_101824551	3300010166	Serpentine Soil	MTRAKMRAGLDMLPTWALEQKAAANRQVIAVMRKRLAAGEAVARMYQEPGLAWLERQAEVAEELVAERQAASRAD*
Ga0126306_111904392	3300010166	Serpentine Soil	MTRTEMRESLALLPSWVLQQKAAANRQVIAVMRQRLGAGQEVARMYQEPGLAWLERQAEAAEDLLAERQAEGHRE*
Ga0162651_1000566021	3300012938	Soil	HGPGPYPLMTRAEMRESLELLPSWVLAQKAAANRQLIAVTRQRLAAGEQVARMYQEPGLAWLERQAEAAEQLLAERQAGDQDQ*
Ga0163162_102254493	3300013306	Switchgrass Rhizosphere	MRESLALLPSWVLAQKAAANRQVIAVMRQRLAAGEQVARMYQEPGLAWLERQAEVAEGLVDKRQAAAKRHR*
Ga0182000_100008668	3300014487	Soil	MTRAEMRESLDLLPTWALEQKATANRQVIAIMRERLAAGQAVARMYQEPGLAWLERQAQAGEALIIQRQTQGHQADP*
Ga0182000_100263503	3300014487	Soil	MRAGLELLSTWALEQKAAANRQVIAVMRGRLAAGEQVARMYQEPGLAWLERQAEVMEDLVAERQAATRRGR*
Ga0182000_102885121	3300014487	Soil	MTRAEMRAGLDLLPTWALEQKAAANRHVIAVMRERLAAGEQVARMYQEPGLAWLERQAQTAEELTTERRDQEQEVD*
Ga0163161_114805961	3300017792	Switchgrass Rhizosphere	VLMCADCQAARGRGSGPYPVMTWAEMRAGLDQLPTWALEQKAAANRQLIAAMRRRLAAGEQAAGMYQGPGLAWLERQAEIGEDLVAERQAAAKRHR
Ga0184605_100862461	3300018027	Groundwater Sediment	MTRADMRAGLDLLPTRALEQKAAANRQVIAVMRERLAAGEEVARMYQEPGLAWLERQTQAAEELIVQRRT
Ga0184608_100392931	3300018028	Groundwater Sediment	MCADCQAARGHGSGPYPVMTRAEMRAGLDLLPTWVLEQKAAANRQVIAVMRQRLAAGEQVARMYQEPGLAWLERQAEVAEGLVGKRQAGKRDR
Ga0184620_102357111	3300018051	Groundwater Sediment	VLMCAGCQATRGHGSGPYPVMTRNQMRAGLDLLPTWALEQKAAANRQVITVMRQRLAAGEEVARMYQEPGLAWLERQADVAEDLVARRKRTAENRPGS
Ga0184612_100989403	3300018078	Groundwater Sediment	MTRIQMRAGLDLLPTWALEQKAAANRQVIAVMRQRLAAGEEVARMYQDPGLAWLERQADVAEDLVAQRKRTAENRPGS
Ga0184625_101507181	3300018081	Groundwater Sediment	TVLMCADCLATRGHGAGPYPVMTRAEMRAGLDLLPTWALEQKAAANRHVIAVMRERLAAGEQVARMYQEPGLAWLERQAQTAEELITERRHQGQQVD
Ga0190269_118799491	3300018465	Soil	MRAGLDLMATWALEQKAAANRQVIAVMRQRLAAGEQVARMYQQLGLGWLERQAQAAEQLLAERQAGDQNQ
Ga0190268_101140582	3300018466	Soil	TVLMCADCQAARGHGSGPYPVMTRAGMRAGLDLLPTWALQQKAAANRQVIAVMRERLAAGEEVARMYQEPGLAWLERQAQTAEELITERRNQEQHVD
Ga0190268_108968781	3300018466	Soil	MCADCQAARGHGSGPYPVMTRAEMRAGLDLLPTWALEQKAAANRQLIAVMRQRLAAGEQVARMYQEPGLAWLERQAEVAEDLVAERQAAAKRHG
Ga0190274_128433732	3300018476	Soil	PVMTRAEMRAALDLMPTWALQQKRPPTAKSSAITGQRLAAGEEVPRMYQEPGLAWLERQAEVAEDLVAERQAATKRHG
Ga0193705_10506001	3300019869	Soil	MWESLELLPSWVLAQKAAANRQVIAVTRRRLAAGEAVARMYQEPGLAWLERQAEAAEHLLAEWQAGDQNQCRAGAALK
Ga0210381_102330332	3300021078	Groundwater Sediment	YPVMTRAEMRAGLDLLPTWVLEQKAAANRQVIAVMRQRLAAGEQVARMYQEPGLAWLERQAEVAEGLVGKRQAGKRDR
Ga0210381_103949391	3300021078	Groundwater Sediment	VLMCVDCQAARGHGAGPYPVMTRAQMRESLELLPSWALEQKAAANRQLIVITRQRLAAGEQVAHMYQEPGLAWLERQAEAAERLLAERLADGRRD
Ga0224452_10257162	3300022534	Groundwater Sediment	MTRIQMRAGLDLLPTWALEQKAAANRQVIAVMRQRLAAGEEVARMYQDPGLAWLERQADVAEDLVARRKRTAENRPGS
Ga0224452_11930341	3300022534	Groundwater Sediment	VDCQAARGHGAGPYPVMTRAQMRESLELLPSWALEQKAAANRQLIVITRQRLAAGEQVAHMYQEPGLAWLERQAEAAERLLAERLADGRRD
Ga0222623_100722171	3300022694	Groundwater Sediment	RHGSGPYPVMTRAQARAGLDLLPTWALEQKAAANRQVIAIMRRRLAAGEQVARMYQEPGLAWLDRQAEVAEDLVAERQATTKRHS
Ga0207668_112498841	3300025972	Switchgrass Rhizosphere	EMRAGLDQLPTWALEQKAAANRQLIAAMRRRLAAGEQAAGMYQGPGLAWLERQAEIGEDLVAERQAAAKRHR
Ga0208710_1003472	3300026790	Soil	MPMCADCQAARGHGGGPYPVMTRAEMRAGLDLLPTWALEQKAAANRQVIAVMRERLAAGQAVARMYQEPGLAWLERQAQAGEALIIQRQTQGHQADP
Ga0209898_10040692	3300027068	Groundwater Sand	VTRTELRAGLDLLATWALAQKAAANRQQIEQMRERLAAGEEVAPMYQEPGLAWLERQAEVAEDLVKERQAATRDESG
Ga0209899_10060941	3300027490	Groundwater Sand	TGPYPAMTRAEMRASLDLMPTWVLETKAAANRRVIAVMRQRLAAGEQVARMYQEPGLVWLERQAEIAEDLVAERHAVGHPAD
Ga0209795_100444212	3300027718	Agave	MPMCADCQAARGHGGGPYPVMTRAEMRESLDLLPTWALEQKATANRQVIAIMRERLAAGQAVARMYQEPGLAWLERQAQAGEALIIQRQTQGHQADP
Ga0209814_100115633	3300027873	Populus Rhizosphere	MTRAQMRESLALPPSWALQQKAAANRQLIVITRQRLAAGEEVAHMYQEPGLAWLERQAEAAERLLAERQADGRRD
Ga0209814_103477792	3300027873	Populus Rhizosphere	PYPVMTRAQMRAGLDLLPTWALEQKAAANRQLIAVMRQRLAAGEEVARMYQEPGLAWLERQAEVMEDLVAERQAAHR
Ga0209481_101911111	3300027880	Populus Rhizosphere	LELLPSWVLAQKAAANRQLIAVTRQRLAAGEQVTRMYQEPGLAWLECQAEAAEQLLAGRQADGHDR
Ga0207428_108967861	3300027907	Populus Rhizosphere	PVMTRSEMRAGLDLMPTWALEQKATANRQVVAIMRERLAAGEQVARMYQEPGLAWLERQAEAAEDLVTGRHTAAKRHR
Ga0307295_102201322	3300028708	Soil	DCQAARGHGAGPYPVMTRAQMRGSLDALPTWALEQKAAANRQVIAVMRRRLAAGEQVARMYQEPGLAWLERQAEVAEDLVAERQATSRHGD
Ga0307285_100502832	3300028712	Soil	MCADCQAARGHGSGPYPVMTRAEMRAGLDLTATWALEQKAAANRQLIVATRLRLAAGEQVARMYQEPGLAWLERQAEVAEELVAQRKRTAEDRGS
Ga0307285_102397842	3300028712	Soil	WCWPYPVMTRADMRAGLDLLPTRALEQKAAANRQVIAVMRERLAAGEEVARMYQEPGLAWLERQTQAAEELIVQRRT
Ga0307298_101593251	3300028717	Soil	LDLLPTRALEQKAAANRQVIAVMRERLAAGEEVARMYQEPGLAWLERQTQAAEELIVQRR
Ga0307301_100463282	3300028719	Soil	MCANCQAARGHGSGPYPVMTRAEMRAGLDLTATWALEQKAAANRQLIVATRLRLAAGEQVARMYQEPGLAWLERQAEVAEELVAQRKRTAEDRGS
Ga0307317_102218371	3300028720	Soil	RAGLDLLPTWALEQKAAANRQVIAVMRQRLAAGEEVARMYQEPGLAWLERQADVAEDLVARRKRTAENRPGS
Ga0307315_102853652	3300028721	Soil	MTRAEMGAGLDLLPTWVLEQKAAANRQVIAVMRQQLAAGEQVARMYQEPGLAWLERQAEVAERLIGKRQAGKRDR
Ga0307319_100207092	3300028722	Soil	MTRAHMRAGLDLMPTWALQQKATANRQVIAIMRRRLAAGEEVARMYQEPGPAWLERQSEVAEDLVAERQAAVK
Ga0307319_100382272	3300028722	Soil	LDIRQAQSDTRLGLHGPGPYPLMTRAEMRESLELLPSWVLAQKAAANRQLIAVTRQRLAAGEQVARMYREPGLAWLECQAEAAEQLLAERHADG
Ga0307319_100874452	3300028722	Soil	LMCVDCQAARGHGAGPYPVMTRAQMRESLELLPSWALEQKAAANRQLIVITRQRLAAGEQVAHMYQEPGLAWLERQAEAAERLLAERLADGRRD
Ga0307319_102509751	3300028722	Soil	FALLTPTLAELARKLRLGKQATRGHGSGPYPVMTRIQMRAGLDLLPTWALEQKAAANRQVIAVMRQRLAAGEEVARMYQDPGLAWLERQADVAEDLVARRKRTAENRPGS
Ga0307319_102685581	3300028722	Soil	CQAARGHGSGPYPVMTRAEMGAGLDLLPTWVLEQKAAANRQVIAVMRQQLAAGEQVARMYQEPGLAWLERQAEVAERLIGKRQAGKRDR
Ga0307319_103102811	3300028722	Soil	YPVMTRAEMRAGLDLLPTWALEQKAAANRQLIAAMRLRLAAGEQVVRMYQEPGLAWLERQAQVAEELVAQRKRTTENRPGS
Ga0307318_100218912	3300028744	Soil	VLEQKAAANRQVIAVMRQRLAAGEQVARMDQEPGLAWLERQAEVAEGLVGKRQAGNRDH
Ga0307316_101002081	3300028755	Soil	WALEQKAAANRQLIAAMRRRLAAGEQVARMYQEPGLAWLERQAEVAEELVAQRKRTTENRPGS
Ga0307316_103749991	3300028755	Soil	TRAQMRESLELLPSWALEQKAAANRQLIVITRQRLAAGEQVAHMYQEPGLAWLERQAEAAERLLAERLADGRRD
Ga0307320_100337244	3300028771	Soil	RSGAAPELVLEQKAAANRQVIAVMRQRLAAGEQVARMDQEPGLAWLERQAEVAEGLVGKRQAGNRDH
Ga0307320_100840761	3300028771	Soil	MTRIQMRAGLDLLPTWALEQKAAANRQVIAVMRQRLAAGEEVARMYQEPGLAWLERQADVAEDLVARRKRTAENRPGS
Ga0307320_103494192	3300028771	Soil	DPGPSPLMTRSELRESLALLPSWVLAQKAAANRQLIAVMRQRLAAGEQVARMYQEPGLAWLECQAEAAEQLLGERQAGKQNE
Ga0307320_104409861	3300028771	Soil	AGLDLLPTSALEQKAAANRQLIAAMRLRLAAGEQVARMYQEPGLAWLERQAEVAEELVAQRKRTSENRPGG
Ga0307290_104028011	3300028791	Soil	AEMRAGLDLLPTWALEQKAAANRQLIAAMRLRLAAGEQVVRMYQEPGLAWLERQAQVAEELVAQRKRTTENRPGS
Ga0307287_100397621	3300028796	Soil	AGPYPVMTRAQMRESLELLPSWALEQKAAANRQLIVITRQRLAAGEQVAHMYQEPGLAWLERQAEAAERLLAERLADGRRD
Ga0307287_101194041	3300028796	Soil	NGSGPYPVMTRAEMRAGLDLLPTWVLEQKAAANRQVIAVMRQRLAAGEQVARMYQESGLAWLERQAEVAEGLVGKRQAGKRDR
Ga0307287_103807871	3300028796	Soil	ELRAGLDLLPTWVLEQKAAANRQVIAVMRQRLAAGEQVARMYQEPGLAWLERQAEVAEGLATKRQARKRDR
Ga0307305_100624211	3300028807	Soil	TWVLEQKAAANRQVIAVMRQQLAAGEQVARMYQEPGLAWLERQAEVAERLIGKRQAGKRD
Ga0307302_100090451	3300028814	Soil	LMATWALEQKAAANRQLIAAMRLRLTAGEEVTRMYQEPGLAWLERQAEVAEELVAQRKRTTENRPGS
Ga0307302_103480212	3300028814	Soil	DCQAARGHGSGPYPVMTRAEMRAGLDQLPSWVLEQKAAANRHVIAVMRTRLAAGEQVARMYQEPGLAWLERQAEAAEDLVAERQAAARGAD
Ga0307296_100621655	3300028819	Soil	MCADCQAAYGHGAGPYPMMTRAQMRADLELLPTWALEQKAAANRQVIAVMRRRLAAGEEVARRYQEPGLAWLERQAEVAEDL
Ga0307296_104796291	3300028819	Soil	VLMCADCQAARGHGSGPYPVMTRAEMRAGLDLMVTWALEQKAAANRQLIAAMRRRLAAGEQVARMYQEPGLAWLERQAEVAEEPVAQRKRTTENRPGS
Ga0307312_100676412	3300028828	Soil	TWALEQKAAANRQVIAVMRRRLAAGEQVARMYQEPGLAWLERQAEVAERLIGKRQAGKRD
Ga0307286_102200472	3300028876	Soil	EMRESLELLPSWVLAQKAAANRQLIAVMRQRLAAGEEMARMYQAPGLAWLERQAEAAEQLLAERQAGDQHQ
Ga0307278_101612441	3300028878	Soil	AVLMCADCQAARGHGAGPYPTMTRAELRAGLDLLPTWVLLQKASANKQVIAVTRQRLAAGEEVARMYQEPGLAWLERQAEVAEDLVAERRAAAGCHNG
Ga0307300_100728841	3300028880	Soil	MCADCQAARGHGSGPYPVMTRIQMRAGLDLLPTWALEQKAAANRQVIAVMRQRLAAGEEVARMYQDPGLAWLERQADVAEDLVARRKRTAENRPGS
Ga0307308_103635331	3300028884	Soil	RLGLHDLGPYPPMTPAEMRESLELLPSWVLAQKAAANRQLIAVMRQRLAAGEQVARMYQEPGLAWLERQAEAAEQLLAERQAGEQN
Ga0268259_101686722	3300030499	Agave	MTTRARMRAGLELLSTWALEQKAAANRQVIAVMRRRQAAGEDVPGAGLAWLKRQAEVAEDLVVRG
Ga0268243_10187733	3300030510	Soil	YPVMTRAEMRESLDLLPTWALEQKATANRQVIAIMRERLAAGQAVARMYQEPGLAWLERQAQAGEALIIQRQTQGHQADP
Ga0307408_1000785873	3300031548	Rhizosphere	MRESLALLPSWVLAQKAAANRQLIAVMRQRLAAGEQVARMYQKPGLAWLECQAEAAEQLLGERQACEQN
Ga0307408_1011489762	3300031548	Rhizosphere	FTVLMCADCQAARGHGTGPYPVMTRAEMRAGLDMLPTWALEQKAAANRQVIAVMRERLAAAAAVARMYQEPGLAWLERQAEVAEDLVAEREASRAD
Ga0307408_1013591222	3300031548	Rhizosphere	IRAEMRAGLDLMASWALEQKAAANRQVIDIMRRRLAAGEQVARMYQEPGLSWLERQAEVAEDLVAERQAAAKRHR
Ga0307408_1015963451	3300031548	Rhizosphere	GSGPYPVMTRAEMRAGLDLLPTWALEQKTAANRQLIAAMRLRLAAGEQVARMYQEPGLAWLERQAEVVEELVAQRKRTTVNRPGA
Ga0307408_1021968582	3300031548	Rhizosphere	VMTRAEMRESLDLLPTWALEQKATANRQVIAIMRERLAAGQAVARMYQEPGLAWLERQAQASEALIIQRQTQGHQADP
Ga0307405_100315092	3300031731	Rhizosphere	MRAGLDLLPTWALEQKAAANRQVIAIMRQRLAAGEQAARMYQEPGLAWLERQAEVIEELVAQRKRTAENRPGS
Ga0307405_101107702	3300031731	Rhizosphere	VLMCVDCQAARGHGSGPYPVMIRAEMRAGLDLMASWALEQKAAANRQVIDIMRRRLAAGEQVARMYQEPGLSWLERQAEVAEDLVAERQAAAKRHR
Ga0307405_102022351	3300031731	Rhizosphere	AGLDLMATWALEQKAAANRQVIDIMRRHLAAGEEVTRMYQEPGLSWLERQAEVAEGLVAERQAAAKRHR
Ga0307405_114798011	3300031731	Rhizosphere	GPYPVMTRAQMRESLELLPSWVLAQKAAANRQVIAVMRQRLAAGEEVARMYQEPGLAWLERQAEAAEALLAERQAHGHRE
Ga0307405_117033311	3300031731	Rhizosphere	GLDMLPTWALEQKAAANRQVIAVMRERLAAGEAVARMYQEPGLAWLERQAEVAEDLVAEREASRAD
Ga0307413_101421622	3300031824	Rhizosphere	MRGSLALLPSWALEQKAAANRQVIAVMRQRLAAGEAVARMYQEPGLAWLERQAAAAEDLLAERQAADHPN
Ga0307413_119753682	3300031824	Rhizosphere	DMLPTWALEQKAAANRQVIAVMRERLAAAAAVARMYQEPGLAWLERQAEVAEDLVAEREASRAD
Ga0307410_100929753	3300031852	Rhizosphere	RAGLELLPTWVLEQKAAANRQVIAVMRQRLTAGEQVARMYQEPGLAWLERQAEVAEGLVAKRQAGNRDH
Ga0307410_105350373	3300031852	Rhizosphere	DCQAARGHGAGPYPVMTRAEMRASLDLLPTWALEQKAAANRQVIAVMRQRLAAGEEVARMYQEPGLAWLERQAEAAEDLIAERRTAGRHAD
Ga0307410_107813351	3300031852	Rhizosphere	GLDLLPTWALEQKAAANRQVIAVMRKRLAAGEEVARMYQEPGLAWLERQAQAAEELIAERRARARHV
Ga0307410_114669322	3300031852	Rhizosphere	VLMCADCQAARGYGAGPYPVMTRAEMRAGLDMLPTWALEQKAAANRQVIAVMRKRLAAGEAVARMYQEPGLAWLERQAEVAEELVAERQAASRAD
Ga0307406_100868781	3300031901	Rhizosphere	YPVMTRAELRAGLDLLPTWALEQKAAANRQLIAVMRRRLAAGEQVARMYQEPGLAWLERQAEVAEELVAERQPATTRTR
Ga0307407_105477781	3300031903	Rhizosphere	VLMCADCQAARGHGSGPYPVMTRAEMRAGLDLLPTWALEQKAAANRQVIAVMRKRLAAGEEVARMYQEPGLAWLERQAQAAEELIAERRARARHV
Ga0307407_108501681	3300031903	Rhizosphere	TDCQAARGYGSGPYPVMTRAEMRAGLDQLPTWALEQKAAANRQVIAITRQRLAAGEQVPRMYQEPGLAWLERQAEVAEALVAERQAAAKRHR
Ga0307412_103397151	3300031911	Rhizosphere	VMIRAEMRAGLDLMASWALEQKAAANRQVIDIMRRRLAAGEQVARMYQEPGLSWLERQAEVAEDLVAERQAAAKRHR
Ga0307412_111462312	3300031911	Rhizosphere	VLMCADCQAARGYGTGPYPVMTRAEMRAGLDMLPTWALEQKAAANRQMIAVMRERLAAGEAVARMYQEPGLAWLERQAEVAEELVAERQAASRAD
Ga0307409_1000914231	3300031995	Rhizosphere	SGPYPVMTRAEMRAGLDQLPTWALEQKAAANRQVIAITRQRLAAGEQVPRMYQEPGLAWLERQAEVAEALVAERQAAAKRHR
Ga0307409_1019931701	3300031995	Rhizosphere	MCAGCQAARGHGAGPYPVMARAEMRAGLDLLPTWALEQEVAANRQVIAVMRSRLAAGEEVSRMYQEPGLAWLERQAEVAEELITDRRAGGRHL
Ga0307409_1023888272	3300031995	Rhizosphere	DCQAARGHGAGPYPVMTRAQMRASLDLLPTWALEQKAAANRQVVAVMRQRLAAGEEVARMYQEPGLAWLERQAEAAEDLITERQATRRHTH
Ga0308176_125583252	3300031996	Soil	MTRVQMRESSVLLPSWALQQKAAANCQVIAVMRQRLAAGAQVAQMYQEPGLAWLERQAEAAEELLAERQAADHPN
Ga0307416_1000460504	3300032002	Rhizosphere	MRAGLELLPTWVLEQKAAANRQVIAVMRQRLTAGEQVARMYQEPRLAWLERQAEVAEGLVAKRQAGNRDH
Ga0307416_1001054553	3300032002	Rhizosphere	MTRAEMRAGLELLPTWALEQKAAANRQVIAVMRQRLAAGEQAARMYQEPGLAWLERQAEAAEGLVAKRQAGKRDR
Ga0307414_109848941	3300032004	Rhizosphere	VLMCADCQAARGHGAGPCPVMTRAEMRAGLELLPTWALEQKAAANRQIIGVMRSRLAAGEEVARMYREPGLAWLERQAEVTEELITDRRAGDRHL
Ga0307414_118440841	3300032004	Rhizosphere	PVMTRAEMRAGLDMLPTWALEQKAAANRQVIAVMRERLAAGEAVARMYQEPGLAWLERQAEVAEELVAERQAASRAD
Ga0307411_102937192	3300032005	Rhizosphere	MTPAEMRESLELLPSWVLEQKAAANRQVIAVMRQRLAAGEQVARMYQEPGLAWLERQAEAAEQLLAERQAGDQNQ
Ga0307411_105270182	3300032005	Rhizosphere	MRGSLALLPSWALEQKAAANRQVIAVMRQRLAAGEAVARMYQEPGLAWLERQAAAAEDLLAERQQ
Ga0307415_1004675392	3300032126	Rhizosphere	PYPVMTRAEMRAGLDMLPTWALEQKAAANRQVIAVMRERLAAGEAVARMYQEPGLAWLERQAEVAEDLVAEREASRAD
Ga0268251_100851552	3300032159	Agave	MRAGLDLLPTWALEKKAAANRQVIATRQRLAAGEQVARMYQEPGLAWLERQAEVAEELVAQRKRTTENRPGS
Ga0268251_101305842	3300032159	Agave	PVMTRAEMRTGLDLLPTWALKQKAAANRELIAAMRLRLAAGEQVARMYQEPGLAWLERQAEVAEELVAQRKRTTENRPGR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F048659

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences