NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F048826

Metagenome / Metatranscriptome Family F048826

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F048826
Family Type Metagenome / Metatranscriptome
Number of Sequences 147
Average Sequence Length 88 residues
Representative Sequence KDGRLIFRSNIANDRELRQFLEDLLAAERAAAEGRVLHLQYSERVIPHEADQATHRRVYERAGPKAFEDYWAKRPQHRNRWP
Number of Associated Samples 133
Number of Associated Scaffolds 147

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 0.68 %
% of genes near scaffold ends (potentially truncated) 97.28 %
% of genes from short scaffolds (< 2000 bps) 91.84 %
Associated GOLD sequencing projects 127
AlphaFold2 3D model prediction Yes
3D model pTM-score0.44

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (100.000 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil
(9.524 % of family members)
Environment Ontology (ENVO) Unclassified
(30.612 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(31.293 % of family members)


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Multiple Sequence Alignments

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 39.09%    β-sheet: 1.82%    Coil/Unstructured: 59.09%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.44
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 147 Family Scaffolds
PF09084NMT1 65.31
PF07883Cupin_2 0.68
PF12974Phosphonate-bd 0.68
PF16868NMT1_3 0.68
PF04909Amidohydro_2 0.68
PF08534Redoxin 0.68

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 147 Family Scaffolds
COG0715ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic componentInorganic ion transport and metabolism [P] 65.31
COG4521ABC-type taurine transport system, periplasmic componentInorganic ion transport and metabolism [P] 65.31

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms100.00 %
UnclassifiedrootN/A0.00 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000651|AP72_2010_repI_A10DRAFT_1030674All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium691Open in IMG/M
3300000890|JGI11643J12802_11810934All Organisms → cellular organisms → Bacteria828Open in IMG/M
3300000955|JGI1027J12803_102856279All Organisms → cellular organisms → Bacteria735Open in IMG/M
3300000956|JGI10216J12902_100451862All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1207Open in IMG/M
3300003373|JGI25407J50210_10179812All Organisms → cellular organisms → Bacteria521Open in IMG/M
3300003996|Ga0055467_10011660All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1785Open in IMG/M
3300004013|Ga0055465_10123202All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium798Open in IMG/M
3300004114|Ga0062593_102613715All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium573Open in IMG/M
3300004463|Ga0063356_103236301All Organisms → cellular organisms → Bacteria702Open in IMG/M
3300004643|Ga0062591_101171696All Organisms → cellular organisms → Bacteria746Open in IMG/M
3300004782|Ga0062382_10449549All Organisms → cellular organisms → Bacteria613Open in IMG/M
3300005332|Ga0066388_106803558All Organisms → cellular organisms → Bacteria576Open in IMG/M
3300005339|Ga0070660_100190236All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1662Open in IMG/M
3300005365|Ga0070688_101029337All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium655Open in IMG/M
3300005438|Ga0070701_10536145All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium765Open in IMG/M
3300005451|Ga0066681_10764534All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium585Open in IMG/M
3300005454|Ga0066687_10272031All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium952Open in IMG/M
3300005456|Ga0070678_101242661All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium692Open in IMG/M
3300005459|Ga0068867_102017086All Organisms → cellular organisms → Bacteria545Open in IMG/M
3300005467|Ga0070706_100674390All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium959Open in IMG/M
3300005467|Ga0070706_101087762All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium736Open in IMG/M
3300005545|Ga0070695_100187561All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1469Open in IMG/M
3300005547|Ga0070693_100022993All Organisms → cellular organisms → Bacteria3324Open in IMG/M
3300005554|Ga0066661_10945262All Organisms → cellular organisms → Bacteria504Open in IMG/M
3300005557|Ga0066704_10885800All Organisms → cellular organisms → Bacteria552Open in IMG/M
3300005560|Ga0066670_10491982All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium754Open in IMG/M
3300005577|Ga0068857_101435016All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium672Open in IMG/M
3300005587|Ga0066654_10040298All Organisms → cellular organisms → Bacteria2008Open in IMG/M
3300005617|Ga0068859_101542470All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium733Open in IMG/M
3300005840|Ga0068870_10639478All Organisms → cellular organisms → Bacteria → Proteobacteria727Open in IMG/M
3300005841|Ga0068863_100344804All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1449Open in IMG/M
3300005844|Ga0068862_101762577All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium628Open in IMG/M
3300005886|Ga0075286_1003278All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1854Open in IMG/M
3300005889|Ga0075290_1021571All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium793Open in IMG/M
3300006041|Ga0075023_100403122All Organisms → cellular organisms → Bacteria592Open in IMG/M
3300006806|Ga0079220_11960361All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium521Open in IMG/M
3300006845|Ga0075421_101168710All Organisms → cellular organisms → Bacteria860Open in IMG/M
3300006852|Ga0075433_10022865All Organisms → cellular organisms → Bacteria → Proteobacteria5253Open in IMG/M
3300006853|Ga0075420_100335242All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1310Open in IMG/M
3300006854|Ga0075425_100321976All Organisms → cellular organisms → Bacteria1780Open in IMG/M
3300006904|Ga0075424_101819643All Organisms → cellular organisms → Bacteria644Open in IMG/M
3300006954|Ga0079219_10640865All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium790Open in IMG/M
3300007004|Ga0079218_10310875All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1286Open in IMG/M
3300009053|Ga0105095_10175400All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1173Open in IMG/M
3300009100|Ga0075418_11167067All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium834Open in IMG/M
3300009137|Ga0066709_104127359All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium529Open in IMG/M
3300009137|Ga0066709_104145406All Organisms → cellular organisms → Bacteria528Open in IMG/M
3300009156|Ga0111538_10671010All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1314Open in IMG/M
3300009157|Ga0105092_10114843All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1484Open in IMG/M
3300009807|Ga0105061_1016885All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium952Open in IMG/M
3300009836|Ga0105068_1037971All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium853Open in IMG/M
3300010047|Ga0126382_10632885All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium886Open in IMG/M
3300010047|Ga0126382_10946026All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium750Open in IMG/M
3300010047|Ga0126382_12210855All Organisms → cellular organisms → Bacteria529Open in IMG/M
3300010336|Ga0134071_10304310All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium800Open in IMG/M
3300010359|Ga0126376_10418141All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1214Open in IMG/M
3300010359|Ga0126376_10939275All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium859Open in IMG/M
3300010360|Ga0126372_10933249All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium874Open in IMG/M
3300010397|Ga0134124_10030580All Organisms → cellular organisms → Bacteria4457Open in IMG/M
3300010399|Ga0134127_10490873All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1237Open in IMG/M
3300010399|Ga0134127_11718913All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium703Open in IMG/M
3300010868|Ga0124844_1166808All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium823Open in IMG/M
3300010868|Ga0124844_1195439All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium742Open in IMG/M
3300011427|Ga0137448_1044860All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1105Open in IMG/M
3300011434|Ga0137464_1232818All Organisms → cellular organisms → Bacteria559Open in IMG/M
3300011434|Ga0137464_1267302All Organisms → cellular organisms → Bacteria517Open in IMG/M
3300011435|Ga0137426_1047279All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1121Open in IMG/M
3300011445|Ga0137427_10126450All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1042Open in IMG/M
3300011445|Ga0137427_10132160All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1020Open in IMG/M
3300012174|Ga0137338_1123126All Organisms → cellular organisms → Bacteria569Open in IMG/M
3300012198|Ga0137364_10023672All Organisms → cellular organisms → Bacteria3821Open in IMG/M
3300012360|Ga0137375_11002722All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium657Open in IMG/M
3300012361|Ga0137360_10044293All Organisms → cellular organisms → Bacteria3173Open in IMG/M
3300012474|Ga0157356_1026559All Organisms → cellular organisms → Bacteria509Open in IMG/M
3300012582|Ga0137358_10076701All Organisms → cellular organisms → Bacteria2247Open in IMG/M
3300012582|Ga0137358_10504069All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium815Open in IMG/M
3300012685|Ga0137397_10467880All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium939Open in IMG/M
3300012911|Ga0157301_10463101All Organisms → cellular organisms → Bacteria506Open in IMG/M
3300012913|Ga0157298_10067307All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium879Open in IMG/M
3300012922|Ga0137394_11365343All Organisms → cellular organisms → Bacteria570Open in IMG/M
3300012948|Ga0126375_10253595All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1193Open in IMG/M
3300012948|Ga0126375_10740764All Organisms → cellular organisms → Bacteria770Open in IMG/M
3300012972|Ga0134077_10165209All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium888Open in IMG/M
3300012984|Ga0164309_10181545All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1431Open in IMG/M
3300012986|Ga0164304_10128329All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1562Open in IMG/M
3300013308|Ga0157375_10247349All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1944Open in IMG/M
3300014254|Ga0075312_1081981All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium651Open in IMG/M
3300014259|Ga0075311_1083541All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium662Open in IMG/M
3300014268|Ga0075309_1083714All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium762Open in IMG/M
3300014297|Ga0075306_1127608All Organisms → cellular organisms → Bacteria510Open in IMG/M
3300014317|Ga0075343_1073189All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium736Open in IMG/M
3300014868|Ga0180088_1061757All Organisms → cellular organisms → Bacteria662Open in IMG/M
3300014884|Ga0180104_1027031All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1456Open in IMG/M
3300015261|Ga0182006_1124301All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium893Open in IMG/M
3300015374|Ga0132255_103954260All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium629Open in IMG/M
3300016371|Ga0182034_11493428All Organisms → cellular organisms → Bacteria592Open in IMG/M
3300017939|Ga0187775_10124287All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium893Open in IMG/M
3300017966|Ga0187776_11058769All Organisms → cellular organisms → Bacteria600Open in IMG/M
3300017997|Ga0184610_1085746All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium982Open in IMG/M
3300018054|Ga0184621_10090304All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1074Open in IMG/M
3300018071|Ga0184618_10478168All Organisms → cellular organisms → Bacteria523Open in IMG/M
3300018074|Ga0184640_10072421All Organisms → cellular organisms → Bacteria1461Open in IMG/M
3300018075|Ga0184632_10462341All Organisms → cellular organisms → Bacteria524Open in IMG/M
3300018076|Ga0184609_10053957All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1722Open in IMG/M
3300018076|Ga0184609_10346823All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium693Open in IMG/M
3300018077|Ga0184633_10178177All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1101Open in IMG/M
3300018079|Ga0184627_10051077All Organisms → cellular organisms → Bacteria2137Open in IMG/M
3300018422|Ga0190265_10922108All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium996Open in IMG/M
3300018422|Ga0190265_13024296All Organisms → cellular organisms → Bacteria561Open in IMG/M
3300018469|Ga0190270_12927270All Organisms → cellular organisms → Bacteria539Open in IMG/M
3300018481|Ga0190271_11658692All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium754Open in IMG/M
3300019881|Ga0193707_1108661All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium820Open in IMG/M
3300021859|Ga0210334_10395162All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium686Open in IMG/M
3300025792|Ga0210143_1059857All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium680Open in IMG/M
3300025910|Ga0207684_10739294All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium834Open in IMG/M
3300025931|Ga0207644_10165658All Organisms → cellular organisms → Bacteria → Proteobacteria1722Open in IMG/M
3300025939|Ga0207665_10271983All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1258Open in IMG/M
3300025940|Ga0207691_10036735All Organisms → cellular organisms → Bacteria4539Open in IMG/M
3300025945|Ga0207679_10130215All Organisms → cellular organisms → Bacteria → Proteobacteria2017Open in IMG/M
3300025981|Ga0207640_10219279All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1455Open in IMG/M
3300026014|Ga0208776_1020929All Organisms → cellular organisms → Bacteria556Open in IMG/M
3300026550|Ga0209474_10150423All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1517Open in IMG/M
3300027379|Ga0209842_1047119All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium785Open in IMG/M
3300027462|Ga0210000_1077805All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium543Open in IMG/M
3300027731|Ga0209592_1086642All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1150Open in IMG/M
3300027840|Ga0209683_10469866All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium576Open in IMG/M
3300027873|Ga0209814_10228504All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium805Open in IMG/M
3300027910|Ga0209583_10494304All Organisms → cellular organisms → Bacteria603Open in IMG/M
3300030620|Ga0302046_10116523All Organisms → cellular organisms → Bacteria → Proteobacteria2183Open in IMG/M
(restricted) 3300031248|Ga0255312_1116252All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium657Open in IMG/M
3300031538|Ga0310888_10583141All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium677Open in IMG/M
3300031562|Ga0310886_10507215All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium729Open in IMG/M
3300031740|Ga0307468_100169023All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1434Open in IMG/M
3300031949|Ga0214473_11332075All Organisms → cellular organisms → Bacteria735Open in IMG/M
3300031965|Ga0326597_10814224All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium967Open in IMG/M
3300031965|Ga0326597_11154381All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium769Open in IMG/M
3300032075|Ga0310890_11831838All Organisms → cellular organisms → Bacteria505Open in IMG/M
3300032163|Ga0315281_10169969All Organisms → cellular organisms → Bacteria2454Open in IMG/M
3300032205|Ga0307472_102240575All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium552Open in IMG/M
3300032261|Ga0306920_103466235All Organisms → cellular organisms → Bacteria584Open in IMG/M
3300032421|Ga0310812_10585699All Organisms → cellular organisms → Bacteria500Open in IMG/M
3300032770|Ga0335085_11491790All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium705Open in IMG/M
3300033408|Ga0316605_12392949All Organisms → cellular organisms → Bacteria514Open in IMG/M
3300033412|Ga0310810_10716443All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium926Open in IMG/M
3300033487|Ga0316630_11210203All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium671Open in IMG/M
3300034115|Ga0364945_0188775All Organisms → cellular organisms → Bacteria626Open in IMG/M
3300034147|Ga0364925_0430742All Organisms → cellular organisms → Bacteria502Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil9.52%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil6.80%
SoilEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Soil6.12%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment6.12%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil5.44%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere5.44%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil4.76%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere4.76%
Natural And Restored WetlandsEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands3.40%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment2.04%
Natural And Restored WetlandsEnvironmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands2.04%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil2.04%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil2.04%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil2.04%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil2.04%
Rice Paddy SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil2.04%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil2.04%
Groundwater SandEnvironmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand2.04%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere2.04%
Wetland SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Wetland Sediment1.36%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds1.36%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil1.36%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil1.36%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil1.36%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil1.36%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil1.36%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland1.36%
SedimentEnvironmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment1.36%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere1.36%
Arabidopsis Thaliana RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere1.36%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere1.36%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere1.36%
SedimentEnvironmental → Aquatic → Freshwater → Lake → Sediment → Sediment0.68%
EstuarineEnvironmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine0.68%
Unplanted SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Unplanted Soil0.68%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil0.68%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil0.68%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere0.68%
Sandy SoilEnvironmental → Terrestrial → Soil → Sand → Unclassified → Sandy Soil0.68%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere0.68%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere0.68%
Tabebuia Heterophylla RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Unclassified → Tabebuia Heterophylla Rhizosphere0.68%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere0.68%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.68%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere0.68%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere0.68%

Visualization
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Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000651Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A10EnvironmentalOpen in IMG/M
3300000890Soil microbial communities from Great Prairies - Iowa, Continuous Corn soilEnvironmentalOpen in IMG/M
3300000955Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
3300000956Soil microbial communities from Great Prairies - Kansas, Native Prairie soilEnvironmentalOpen in IMG/M
3300003373Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1Host-AssociatedOpen in IMG/M
3300003996Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailB_D2EnvironmentalOpen in IMG/M
3300004013Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailA_D2EnvironmentalOpen in IMG/M
3300004114Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5EnvironmentalOpen in IMG/M
3300004463Combined assembly of Arabidopsis thaliana microbial communitiesHost-AssociatedOpen in IMG/M
3300004643Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3EnvironmentalOpen in IMG/M
3300004782Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T4Bare2FreshEnvironmentalOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005339Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaGHost-AssociatedOpen in IMG/M
3300005365Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaGEnvironmentalOpen in IMG/M
3300005438Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaGEnvironmentalOpen in IMG/M
3300005451Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130EnvironmentalOpen in IMG/M
3300005454Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136EnvironmentalOpen in IMG/M
3300005456Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaGHost-AssociatedOpen in IMG/M
3300005459Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2Host-AssociatedOpen in IMG/M
3300005467Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaGEnvironmentalOpen in IMG/M
3300005545Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaGEnvironmentalOpen in IMG/M
3300005547Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaGEnvironmentalOpen in IMG/M
3300005554Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110EnvironmentalOpen in IMG/M
3300005557Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153EnvironmentalOpen in IMG/M
3300005560Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119EnvironmentalOpen in IMG/M
3300005577Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2Host-AssociatedOpen in IMG/M
3300005587Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103EnvironmentalOpen in IMG/M
3300005617Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2Host-AssociatedOpen in IMG/M
3300005840Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2Host-AssociatedOpen in IMG/M
3300005841Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2Host-AssociatedOpen in IMG/M
3300005844Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2Host-AssociatedOpen in IMG/M
3300005886Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_0N_205EnvironmentalOpen in IMG/M
3300005889Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_80N_201EnvironmentalOpen in IMG/M
3300006041Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014EnvironmentalOpen in IMG/M
3300006806Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100EnvironmentalOpen in IMG/M
3300006845Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5Host-AssociatedOpen in IMG/M
3300006852Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2Host-AssociatedOpen in IMG/M
3300006853Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4Host-AssociatedOpen in IMG/M
3300006854Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4Host-AssociatedOpen in IMG/M
3300006904Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3Host-AssociatedOpen in IMG/M
3300006954Agricultural soil microbial communities from Georgia to study Nitrogen management - GA ControlEnvironmentalOpen in IMG/M
3300007004Agricultural soil microbial communities from Utah to study Nitrogen management - NC CompostEnvironmentalOpen in IMG/M
3300009053Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 19-21cm March2015EnvironmentalOpen in IMG/M
3300009100Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2Host-AssociatedOpen in IMG/M
3300009137Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158EnvironmentalOpen in IMG/M
3300009156Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009157Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015EnvironmentalOpen in IMG/M
3300009807Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_0_10EnvironmentalOpen in IMG/M
3300009836Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_10_20EnvironmentalOpen in IMG/M
3300010047Tropical forest soil microbial communities from Panama - MetaG Plot_30EnvironmentalOpen in IMG/M
3300010336Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015EnvironmentalOpen in IMG/M
3300010359Tropical forest soil microbial communities from Panama - MetaG Plot_15EnvironmentalOpen in IMG/M
3300010360Tropical forest soil microbial communities from Panama - MetaG Plot_6EnvironmentalOpen in IMG/M
3300010397Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4EnvironmentalOpen in IMG/M
3300010399Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3EnvironmentalOpen in IMG/M
3300010868Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (PacBio error correction)EnvironmentalOpen in IMG/M
3300011427Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT418_2EnvironmentalOpen in IMG/M
3300011434Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT814_2EnvironmentalOpen in IMG/M
3300011435Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT660_2EnvironmentalOpen in IMG/M
3300011445Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT700_2EnvironmentalOpen in IMG/M
3300012174Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT366_2EnvironmentalOpen in IMG/M
3300012198Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012360Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaGEnvironmentalOpen in IMG/M
3300012361Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaGEnvironmentalOpen in IMG/M
3300012474Unplanted soil (control) microbial communities from North Carolina - M.Soil.3.yng.040610EnvironmentalOpen in IMG/M
3300012582Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaGEnvironmentalOpen in IMG/M
3300012685Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaGEnvironmentalOpen in IMG/M
3300012911Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S088-202R-2EnvironmentalOpen in IMG/M
3300012913Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S043-104R-2EnvironmentalOpen in IMG/M
3300012922Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaGEnvironmentalOpen in IMG/M
3300012948Tropical forest soil microbial communities from Panama - MetaG Plot_14EnvironmentalOpen in IMG/M
3300012972Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300012984Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MGEnvironmentalOpen in IMG/M
3300012986Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MGEnvironmentalOpen in IMG/M
3300013308Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaGHost-AssociatedOpen in IMG/M
3300014254Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_CattailB_D2EnvironmentalOpen in IMG/M
3300014259Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_CattailB_D1EnvironmentalOpen in IMG/M
3300014268Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_CattailA_D1EnvironmentalOpen in IMG/M
3300014297Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Joice_CattailNLC_D1EnvironmentalOpen in IMG/M
3300014317Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushOxbow_ThreeSqB_D1EnvironmentalOpen in IMG/M
3300014868Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT830_16_10DEnvironmentalOpen in IMG/M
3300014884Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT730_16_1DaEnvironmentalOpen in IMG/M
3300015261Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaGHost-AssociatedOpen in IMG/M
3300015374Col-0 rhizosphere combined assemblyHost-AssociatedOpen in IMG/M
3300016371Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172EnvironmentalOpen in IMG/M
3300017939Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_10_MGEnvironmentalOpen in IMG/M
3300017966Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MGEnvironmentalOpen in IMG/M
3300017997Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_coexEnvironmentalOpen in IMG/M
3300018054Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1EnvironmentalOpen in IMG/M
3300018071Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1EnvironmentalOpen in IMG/M
3300018074Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b2EnvironmentalOpen in IMG/M
3300018075Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b1EnvironmentalOpen in IMG/M
3300018076Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coexEnvironmentalOpen in IMG/M
3300018077Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b1EnvironmentalOpen in IMG/M
3300018079Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b1EnvironmentalOpen in IMG/M
3300018422Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 TEnvironmentalOpen in IMG/M
3300018469Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 TEnvironmentalOpen in IMG/M
3300018481Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 TEnvironmentalOpen in IMG/M
3300019881Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3c2EnvironmentalOpen in IMG/M
3300021859Metatranscriptome of estuarine sediment microbial communities from the Columbia River estuary, Oregon, United States ? S.306 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300025792Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleC_D2 (SPAdes)EnvironmentalOpen in IMG/M
3300025910Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025931Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025939Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025940Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025945Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025981Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026014Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_0N_205 (SPAdes)EnvironmentalOpen in IMG/M
3300026550Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)EnvironmentalOpen in IMG/M
3300027379Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_10_20 (SPAdes)EnvironmentalOpen in IMG/M
3300027462Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant Co PM (SPAdes)Host-AssociatedOpen in IMG/M
3300027731Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 19-21cm March2015 (SPAdes)EnvironmentalOpen in IMG/M
3300027840Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T4Bare2Fresh (SPAdes)EnvironmentalOpen in IMG/M
3300027873Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)Host-AssociatedOpen in IMG/M
3300027910Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014 (SPAdes)EnvironmentalOpen in IMG/M
3300030620Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT147D111EnvironmentalOpen in IMG/M
3300031248 (restricted)Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - EtOH5_T0_E5EnvironmentalOpen in IMG/M
3300031538Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D1EnvironmentalOpen in IMG/M
3300031562Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D3EnvironmentalOpen in IMG/M
3300031740Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05EnvironmentalOpen in IMG/M
3300031949Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT98D197EnvironmentalOpen in IMG/M
3300031965Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT100D185EnvironmentalOpen in IMG/M
3300032075Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3EnvironmentalOpen in IMG/M
3300032163Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G07_0EnvironmentalOpen in IMG/M
3300032205Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05EnvironmentalOpen in IMG/M
3300032261Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)EnvironmentalOpen in IMG/M
3300032421Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NN3EnvironmentalOpen in IMG/M
3300032770Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5EnvironmentalOpen in IMG/M
3300033408Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day20_noCTEnvironmentalOpen in IMG/M
3300033412Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NCEnvironmentalOpen in IMG/M
3300033487Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_May_M1_C1_D6_AEnvironmentalOpen in IMG/M
3300034115Sediment microbial communities from East River floodplain, Colorado, United States - 29_s17EnvironmentalOpen in IMG/M
3300034147Sediment microbial communities from East River floodplain, Colorado, United States - 44_j17EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
AP72_2010_repI_A10DRAFT_103067413300000651Forest SoilNMANHDELKQFLADLLAADHAAAEGRVLHLQYSERVVAHEADQATHRRVYERAGPKAFEDYWKKRPQHRNRWP*
JGI11643J12802_1181093423300000890SoilVWPNALFVIHEDGRLIFRSNMTNDRELKQFLDDLLAAEKAAADGKVTHLQYSERVLPHVADQATHRRVYERAGPKAFDDYWSKRPQNRNRWP*
JGI1027J12803_10285627923300000955SoilVIHKDGRLIFRSNMANDRELGQFLEELLVTERAAADGRVLHLQYSERVILHEADQATHRRVYERAGPKAFEDYWAKRPQHRNRWP*
JGI10216J12902_10045186223300000956SoilNHRELREFLEDIVAAEKAMAGGRVVHLQYSERVIAHEADQATHRRVYERAGPKAFEDYWAKRPQNRNRWP*
JGI25407J50210_1017981213300003373Tabebuia Heterophylla RhizosphereSNMANHGELRQFLDDLMAADQAAAEGRVQHLQYSERIIPHEADQATHRRVYQRAGTKAFEDYWAKRPQHRNRWP*
Ga0055467_1001166033300003996Natural And Restored WetlandsMANSSELRQFLDDLVTAEQLAAEGEMLHTEYSERVVAHLADKATHRRVYERAGPKAFEDYWKARPHLQGQWP*
Ga0055465_1012320223300004013Natural And Restored WetlandsAYGVWPNALFVIHKDGRLIFRSNMASARELRQYLEALLSAERAAAEGEVTHLQYSERMLPHVADRATHRRVYERAGRKAFEDYWAKRPQNRNRWP*
Ga0062593_10261371523300004114SoilHRELRQFLEDILAAERAVAAGRVVHLQYSERVVAHEADQATHRRVYERAGPKAFVDYWAKRPQNRNRWP*
Ga0063356_10323630113300004463Arabidopsis Thaliana RhizosphereIHRAYGVWPNALFVIHEDGRLIFRSNMTNDRELKQFLDDLLAAEKAAADGKVTHLQYSERVLPHVADQATHRRVYERAGPKAFDDYWSKRPQNRNRWP*
Ga0062591_10117169613300004643SoilLQRLENVKFPILVDHLDGRIHRAYGVWPNALFVINKDGRLIFRSNMANHRELREFLNDLRDADSACAQGKVTHLQYSERVLPHEADQATHHRVYERAGVKSFEDYWAKRSQHRNRWP*
Ga0062382_1044954923300004782Wetland SedimentQIHRAYGAWPNALFVIHKDGRLVFRSNMANHGELRQFLQDIIAAEQAVAAGRVVHLQYSERVVAHEADQATHRRVYERAGPKAFADYWAKRPQQRDRWP*
Ga0066388_10680355813300005332Tropical Forest SoilLIFRSNMANHRELRQFLEDLLAADHAAAEGHVLHLQYSERVVAHEADQATHKRVYERAGPKAFEDYWQKRPHHRNRWP*
Ga0070660_10019023613300005339Corn RhizosphereSNMANHRELRDFLNDLLDAESAREQGQVTHLQYSERVLPHEADQATHHRVYERAGVKAFKDYWDKRPQHRNRWP*
Ga0070688_10102933723300005365Switchgrass RhizosphereDKDGRLIFRSNMANHRELREFLEDIVAAEKAMAAGRVVHLQYSERVVAHEADQATHRRVYERAGPKAFEDYWTKRPQNRNRWP*
Ga0070701_1053614513300005438Corn, Switchgrass And Miscanthus RhizosphereRSNMTSRHELREFIDSLLAAEKAAADGRVTHLQYSERVLPHEADQATHRRVYERAGPKAFEDYWAKRPQNRNRWP*
Ga0066681_1076453413300005451SoilLDGRIHRAYGVWPNALFGIHKDGRLIFRSNMANHRELEQFLCDLLAAEKAAADGRVMHLQYSERVLPHEADQATHRRVYERAGAKAFEDYWAKRPQNRNRWP*
Ga0066687_1027203123300005454SoilPNALFVIHKDGRLIFRSNMANDREFSQFLDDLTAAERAAAEGRVLHLQYSERIVLHEADQATHRRVYERAGPKAFEDYWAKRPQNRNRWP*
Ga0070678_10124266113300005456Miscanthus RhizosphereKDGRLIFRSNMANHRELREFLNDLRDADSACAQGKVTHLQYSERVLPHEADQATHHRVYERAGVKSFEDYWAKRSQHRNRWP*
Ga0068867_10201708623300005459Miscanthus RhizosphereFVIHKDGRLIFRSNMTSRHELREFIDSLLAAEKAAADGRVTHLQYSERVLPHEADQATHRRVYERAGPKAFEDYWAKRPQNRNRWP*
Ga0070706_10067439023300005467Corn, Switchgrass And Miscanthus RhizosphereVWPNALFVIHKDGRLIFRSNMTSRHELREFIDSLLAAEKAAADGRVTHLQYSERVLPHEADQATHRRVYERAGPKAFEDYWAKRPQNRNRWP*
Ga0070706_10108776223300005467Corn, Switchgrass And Miscanthus RhizosphereILVDHLDGRIHRTYGVWPNALFVIHKDGRLIFRSNMANHRELEQFLCDLLAAEKAAADGRVMHLQYSERVLPHEADQATHRRVYERAGAKALEDYWAKRPQNRNRWP*
Ga0070695_10018756133300005545Corn, Switchgrass And Miscanthus RhizosphereDGRIHRTYGVWPNALFVIHKDGRLIFRSNMTSRHELREFIDSLLAAEKAAADGRVTHLQYSERVLPHEADQATHRRVYERAGPKAFEDYWAKRPQNRNRWP*
Ga0070693_10002299333300005547Corn, Switchgrass And Miscanthus RhizosphereRIHRAYGVWPNALFVIHKDGRLIFRSNMANHRELRDFLNDLLDAESAREQGQVTHLQYSERVLPHEADQATHHRVYERAGVKAFKDYWAKRPQHRNRWP*
Ga0066661_1094526223300005554SoilHRELRQFLEDLTAAEQSAVEGRVLHLQYSERVVAHEADQATHRRVYERAGPKAFEDYWAKRPQHCNRWP*
Ga0066704_1088580013300005557SoilNALFVIHKDGRLIFRSNMANHRELRQFLEDLTAAEQSAVEGRVLHLQYSERVVAHEADQATHRRVYERAGPKAFEDYWAKRSQHRNRWP*
Ga0066670_1049198223300005560SoilIFRSNMANDREFRQFLDDLTAAERAAAEGRVLHLQYSERIVLHEADQATHRRVYERAGPKAFEDYWAKRPQNRNRWP*
Ga0068857_10143501613300005577Corn RhizosphereKDGRLIFRSNMANHRELRDFLNDLLDAESAREQGQVTHLQYSERVLPHEADQATHHRVYERAGVKAFKDYWAKRPQHRNRWP*
Ga0066654_1004029833300005587SoilLFVIHKDGRLIFRSNMANDREFRQFLDDLTAAERAAAEGRVLHLQYSERIVLHEADQATHRRVYERAGPKAFEDYWAKRPQNRNRWP*
Ga0068859_10154247013300005617Switchgrass RhizosphereIIVDRLDGHIHRAYGAWPNSLFVIHKDGRLIFRSNMANHLELRQFLEDLVRAEQSAAAGRVLHLQYSERVVAHEADQSTHHRVYERAGPKAFEDYWAKRPQNRGRWP*
Ga0068870_1063947813300005840Miscanthus RhizosphereRAYGVWPNALFVIHKDGRLIFRSNMANHRELRDFLNDLLDAESAREQGQVTHLQYSERVLPHEADQATHHRVYERAGVKAFKDYWAKRPQHRNRWP*
Ga0068863_10034480433300005841Switchgrass RhizosphereGRLIFRSNMANHRELREFLNDLLDAESACAQGKVTHLQYSERVLPHEADQATHHRVYERAGVKAFKDYWAKRPQHRNRWP*
Ga0068862_10176257723300005844Switchgrass RhizosphereRELREFLNDLLDAESACAQGKVTHLQYSERVLPHEADQATHHRVYERAGVKAFEDYWVKRPQHRNRWP*
Ga0075286_100327833300005886Rice Paddy SoilWPNALFVIHKDGRLIFRSNMASARELRQYLEALLSAERAAAEGEVTHLQYSERMLPHVADRATHRRVYERAGRKAFEDYWAKRPQNRNRWP*
Ga0075290_102157123300005889Rice Paddy SoilSARELRQYLEALLSAERAAAEGEVTHLQYSERMLPHVADRATHRRVYERAGRKAFEDYWAKRPQNRNRWP*
Ga0075023_10040312213300006041WatershedsDIRFPILVDHLDGRIHQAYGVWPNALFVIHKDGRLIFRSNMANHAELRQFLQDLIAADQAVAAGKVVHLQYSERVVPHEADQETHHRVYERAGKKAFADYWAKRPQQRNRWP*
Ga0079220_1196036113300006806Agricultural SoilLREFLEDLLSGEKAQANGKITHLQYSERVLAHEADQATHRRVYERAGPKAFEDYWAKRPKHRNRWP*
Ga0075421_10116871023300006845Populus RhizosphereQQLEDVRFPILVDHLDGRIHCAYGVWPNALFVIHKDGRLIFRSNMANHRELHEFLDNLLAAEKAAAEGRVTHLQYSERVLPHEADQATHRRVYERAGPKAFEDYWAKRPQNRNRWP*
Ga0075433_10022865103300006852Populus RhizosphereIHKDGRLIFRSNMANHLELREFLNKLLAAENARAQGKVTHLQYSERLVLHEADQATHQRVYERAGAKAFEDYWAKRPQHRNRWP*
Ga0075420_10033524213300006853Populus RhizosphereHLDGGIHRAYGVWPNALFVIHEDGRLIFRSNMTNDRELKQFLDDLLAAEKAAADGKVTHLQYSERVLPHVADQATHRRVYERAGPKAFDDYWSKRPQNRNRWP*
Ga0075425_10032197613300006854Populus RhizosphereIHRSYGTWPNALFVIHKDGRLVLRSNMANHRELRQFLEDLMAAEQAAAEGHVLHLQYSERVVAHEADQATHRRIYERAGPRAFEDYWAKRPKNRNRWP*
Ga0075424_10181964323300006904Populus RhizosphereWPNALFVIHKDSRLVFRSNMANHRELRQFLEDLVAAEQAAAAGRVLHWQYSERVIPHEADQATHRRVYERAGPKAFEDYWAKRPENRNRWP*
Ga0079219_1064086523300006954Agricultural SoilGRLIFRSNMANHRELRGFLNDLLDAESVRAQGKVTHLQYSERVLPHEADQATHHRVYERAGVKAFEDYWAKRPQHRNRWP*
Ga0079218_1031087513300007004Agricultural SoilLYVIHKDGRLIFGSNMANDRELRQFLDDLLAGEKAAVDGKVTHLQYSERIVPHVADQATHRRVYERAGPKAFEDYWARRPQNRNRWP*
Ga0105095_1017540023300009053Freshwater SedimentIFRSNMTSDRELRQFLDDLLAAEKAATDGNVTHLQYSERVLPHVADQATHRRVYARAGPQAFEDYWSKRPQNRNRWP*
Ga0075418_1116706723300009100Populus RhizosphereNMANNGELRQFLDDLLAAEKAAAEGRVTHLQYSERVMPHEADRATHRRVYERAGPKAFEDYWVKRPQHRNRWP*
Ga0066709_10412735913300009137Grasslands SoilALFGIHKDGRLIFRSNMANHRELEQFLCDLLAAEKAAADGRVMHLQYSERVLPHEADQATHRRVYERAGPKAFEDYWAKRPQNRNRWP*
Ga0066709_10414540613300009137Grasslands SoilALFGIHKDGRLIFRSNMANHRELEQFLCDLLAAEKAAADGRVMHLQYYERVLPHEADQATHRRVYERAGPKAFEDYWAKRPQNRNRWP*
Ga0111538_1067101023300009156Populus RhizosphereHLDGRIHRAYGVWPNALFVIHEDGRLIFRSNMANHRELRDFLNDLLDAESAREQGQVTHLQYSERVLPHEADQATHHRVYERAGVKAFKDYWAKRPQHRNRWP*
Ga0105092_1011484323300009157Freshwater SedimentSYARDLQRLENVQLPIIVDNLEGTIHRRYGNWPNALFVIHKDGRLIFRSNMANHAELRQFLDDLMAADQAAAEGRVVHLQYSERVIPHEADQATHRRVYERAGPKAFEEYWARRPQHRNRWP*
Ga0105061_101688523300009807Groundwater SandRLIFRSNIANDRELRQFLEDLLAAERAAAEGRVLHLQYSERVIPHEADQATHRRVYERAGPKAFEDYWAKRPQHRNRWP*
Ga0105068_103797123300009836Groundwater SandWPNALFVIHKDGRLIFRSNIANDRELRQFLEDLLAAERAAAEGRVLHLQYSERVIPHEADQATHRRVYERAGPKAFEDYWAKRPQHRNRWP*
Ga0126382_1063288513300010047Tropical Forest SoilTLDGKIHQSYGIWPNAIFVIHKEGRLIFRSNMANHRELRQFLADLVAADHAAAEGRVLHLQYSERVVAHEADQATHRRVYERAGPKAFEDYWQKRPLHRNRWP*
Ga0126382_1094602623300010047Tropical Forest SoilIIVDTLDGKIHRSYGTWPNAIFVIHKDGRLIFRSNMANHRELRQFLADLLAADHAAADGRVLHLQYSERVIAHEADQPSHRRVYERAGPKAFEEYWKKRPQHRNRWP*
Ga0126382_1221085513300010047Tropical Forest SoilKDGRLIFRSNMANHDELRQFLADLLAADHAAAEGRVLHLQYSERVVAHEADQTTHRRVYERAGPKAFEDYWKKRPQHRNRWP*
Ga0134071_1030431013300010336Grasslands SoilPNALFVIHKDGRLIFRSNMTNHGELRQFLDEFLAAETAASEGSVTHLQYSERVMPHEADQATHRRVYERAGPKAFEDYWAKRPQNRNRWP*
Ga0126376_1041814123300010359Tropical Forest SoilAIFVIHKDGRLIFRSNMANHLELRQFLADLLAADRAAADGRVLHLQYSERVIAHEADQPTHRRVYERAGPKAFEEYWKKRPQHRNRWP*
Ga0126376_1093927533300010359Tropical Forest SoilPIIVDTLDGKIHRSYGTWPNAIFVIHKDGRLIFRSNMANHDELKQFLADLLAADHAAAEGRVLHLQYSERVVAHEADQATHRRVYERAGPKAFEDYWKKRPQHRNRWP*
Ga0126372_1093324923300010360Tropical Forest SoilFFRSIMANHLELRQFLEDLMRAEQAAADGRVLHLQYSERIIPHEADQATHRRVYERAGPKAFEDYWAKRPENRNRWP*
Ga0134124_1003058013300010397Terrestrial SoilIHRAYGVWPNALFVIHKDGRLIFRSNMANHRELRDFLNDLLDAESAREQGQVTHLQYSERVLPHEADQATHHRVYERAGVKAFKDYWAKRPQHRNRWP*
Ga0134127_1049087313300010399Terrestrial SoilRIQRAYGVWPNALFVINKDGRLIFRSNMANHRELREFLNDLLDAESACAQGKVTHLQYSERVLPHEADQATHHRVYERAGVKAFEDYWVKRPQHRNRWP*
Ga0134127_1171891323300010399Terrestrial SoilALFVIHKDGRLIFRSNMASDRELRQFLDDLLAAEKAAAEGEVTHQQYSERALSHVADRATHRRVYERAGPKAFEDYWAKRPQNRDRWP*
Ga0124844_116680823300010868Tropical Forest SoilIIVDGLDGKIHRSYGTWPNAIFVIHKDGRLIFRSNMANHRELRQFLADLLAADHAAVEGRVLHLQYSERVVAHEADQATHRRVYERAGPMAFEDYWKKRPQHRNRWP*
Ga0124844_119543913300010868Tropical Forest SoilLSYARDLQRLEQVQLPIIVDGLDGKIHRSYGTWPNAIFVIHKDGRLIFRSNMANHRELRRQFLADLLAADHAAAVGRVLHLQYSERVVAHEADQATHRRVYERAGPKAFEDYWKKRPQHRNRWP*
Ga0137448_104486013300011427SoilDGRLIFRSNMANHAELRQFLDDIVAAEKATADGRVLHLQYSERVIAHEADQATHRRVYQRAGPKAFADYWAKRPQNRNRWP*
Ga0137464_123281813300011434SoilLDGRIHRAYGVWPNALFVIHEDGRLVFRSNMANHRELRQFLEDLVAAERAVAAGRMLHLQYSERVVAHEADQATHRRVYERAGPKAFEDYWAKRPGNRNRWP*
Ga0137464_126730223300011434SoilYGVWPNALFVIHKDGRLIFRSNMASDRELRQFLEDLLAAEKAAAEGQVTHLQYSERVLPHVADQATHRRVYERAGAKAFEDYWSKRPQHRNRWP*
Ga0137426_104727913300011435SoilRAYGVWPNALFVIHKDGRLVFRSNMANHRELRQFLEDVVAAEQAIAAGLVVHLQYSERVVAHEADQATHRRVYERAGPKAFEDYWSKRPQNRNRWP*
Ga0137427_1012645013300011445SoilLQRLEDVKFPVIVDPLDGRIHRTYGVWPNALFVIHKDGRLIFRSNMASDRELRQFLEDLLAAEKAAAEGQVTHLQYSERVLPHVADQATHRRVYERAGAKAFEDYWSKRPQHRNRWP*
Ga0137427_1013216023300011445SoilLRQFLEDLVAAEGAVAAGRVLHLQYSERVVAHEADQATHRRVYERAGPKAFEDYWAKRPENRNRWP*
Ga0137338_112312613300012174SoilPNALFVIHKDGRFIFRSNMANHGELRQFLEDLLEAEKAAAEGKVLHLQYSERVVPHEADQATHRRVYERAGPKAFEDYWAKRPQNRNRWP*
Ga0137364_1002367253300012198Vadose Zone SoilHRELRQFLDHLMVAEKALAEGKLLHLQHSERVLPHEADQATHRRVYERAGPKAFEDYWAKRPQNRNRWP*
Ga0137375_1100272213300012360Vadose Zone SoilALFVIHKDGRLIFRSNMANHGELRQFLDDLLAAEKAASEGRVTHLQYSERVMPHEADQATHRRVYERAGPKAFEDYWAKRPQNRNRWP*
Ga0137360_1004429353300012361Vadose Zone SoilRQFLEDLTAAEQSAVEGRVLHLQYSERVVAHEADQATHRRVYERAGPKAFEDYWAKRSQHRNRWP*
Ga0157356_102655913300012474Unplanted SoilKDGRLIFRSNMANHRELREFLNDLLDAESACAQGKVTHLQYSERVLPHEVDQATHHRVYERAGVKAFEDYWVKRPQHRNRWP*
Ga0137358_1007670113300012582Vadose Zone SoilNMANHRELRQFLEDLTAAEQSAVKGRVLHLQYSERVVAHEADQATHRRVYERAGPKAFEDYWAKRSQHRNRWP*
Ga0137358_1050406913300012582Vadose Zone SoilHLDGRIHCAYGVWPNALFVIHKDGRLIFRSNMANDRELREFLDNLLAAEKAAAEGRVTHLQYSERVLPHEADQATHRRVYERAGPKAFEDYWAKRPQNRNRWP*
Ga0137397_1046788023300012685Vadose Zone SoilGKIHRSYGTWPNAIFVIRKDGRLIFRSNMANDHELRQFLEELLAAERAAADGRVQHLQYSERVILHEADQATHRRVYERAGPKAFEDYWAKRRQHRNRWP*
Ga0157301_1046310123300012911SoilIDKDGRLIFRSNMANHRELREFLEDIVAAEKAMAAGRVVHLQYSERVVAHEADQATHRRVYERAGPKAFEDYWTKRPQNRNRWP*
Ga0157298_1006730713300012913SoilKDGRLIFRSNMANHRELRDFLNDLLDAESARAQGQVTHLQYSERVLPHEADQATHHRVYERAGVKAFKDYWAKRPQHRNRWP*
Ga0137394_1136534313300012922Vadose Zone SoilDGRLIFRSNMADDRELRKFLEDLLAAERATADGRVLHLQYSERVIPHEADQATHRRVYERAGPKAFEDYWAKRPQNRNRWP*
Ga0126375_1025359513300012948Tropical Forest SoilNAIFVIHKDGRLIFRSNMANHRELRQFLADLLAADQAAAEGRVLHLQYSERVVAHEADQATHRRVYERAGPKAFEDYWKKRPQHRNRWP*
Ga0126375_1074076413300012948Tropical Forest SoilLPIIVDTLDGKIHRSYGTWPNAIFVIHKDGRLIFRSNMANHRELRQFLADLLAADHAAAEGRVLHLQYSERVVAHEADQATHRRVYQRAGPKAFEDYWQKRPHHRNRWP*
Ga0134077_1016520923300012972Grasslands SoilLIFRSNMANDGELRQFLHDLTAAERAAAEGRVLHLQYSERIVLHEADQATHRRVYERAGPKAFEDYWAKRPQNRNRWP*
Ga0164309_1018154523300012984SoilRDFLNDLLDAESARAQGQVTHLQYSERVLPHEADQATHHRVYERAGVKAFEHYWAKRPQHRNRWP*
Ga0164304_1012832913300012986SoilNALFIINKDGRLIFRSNMANHRELREFLNDLLDAESACAQGKVTHLQYSERVLPHEADQATHHRVYERAGVKAFEHYWAKRPQHRNRWP*
Ga0157375_1024734913300013308Miscanthus RhizosphereMANHRELRDFLNDLLDAESAREQGQVTHLQYSERVLPHQADQATHHRVYERAGVKAFKDYWAKRPQHRNRWP*
Ga0075312_108198113300014254Natural And Restored WetlandsHKDGRLVFRSNMANHRELRQYLEDLLAAENAAAQGKVLHLQYSERVVLHEADQATHRRVYERAGAKAFEDYWVKRPQNRNRWP*
Ga0075311_108354113300014259Natural And Restored WetlandsFRSNMASDREMRQFLEDLLAAETATAGGEVTHLQYSERVLPHVADQATHRRIYERAGAKAFEDYWSKRPQHRNRWP*
Ga0075309_108371423300014268Natural And Restored WetlandsRLVYRSNMANSSELRQFLDDLVTAEQLAAEGEMLHTEYSERVVAHLADKATHRRVYERAGPKAFEDYWKARPHLQGQWP*
Ga0075306_112760813300014297Natural And Restored WetlandsIHRAYGVWPNALFVIHKDGRLIFRSNMANHGELKQFLDDLISAEAAAAAGKVLHLQYSERVVLHEADRATHRRVYERAGPKAFEDYWAKRPQNRNRWP*
Ga0075343_107318923300014317Natural And Restored WetlandsQRYEEIRLPILVDHLDGRIHRAFGVWPNALFVVHKDGRLIFRSNMANHRELKQFLDDLVAADAAAAAGKVLHLQYSERVVLHEADQATHRRVYERAGRQAFEDYWAKRPQNRNRWP*
Ga0180088_106175723300014868SoilRDLQRLEDVKFPVIVDPLDGRIHRTYGVWPNALFVIHKDGRLIFRSNMASDRELRQFLEDLLAAEKAAAEGQVTHLQYSERVLPHVADQATHRRVYERAGAKAFEDYWSKRPQHRNRWP*
Ga0180104_102703113300014884SoilNHGELRQFLEDLLEAEKAAAEGKVLHLHYSERVVPHEADQATHRRVYERAGPKAFEDYWAKRPQNRNRWP*
Ga0182006_112430113300015261RhizosphereALFVINKDGHLILRSNMANHRELREFLNDLLDAESARAQGQVTHLQYSERVLPHEADQATHHRVYERAGVKAFKDYWAKRPQHRNRWP*
Ga0132255_10395426013300015374Arabidopsis RhizosphereHRELREFLNDLRDAESACAQGKVTHLQYSERVLPHEADQATHHRVYQRAGVKAFEDYWAKRPQHRNRWP*
Ga0182034_1149342823300016371SoilENVQLPIIVDHLDGRIHRSYGTWPNALFVIHKDGRLIFRSNMANHRELGQFLEDLIAADQAVREGHLLHLQYSERVVAHEADQTTHRRVYERAGPKAFEDYWAKRPQHRNRWP
Ga0187775_1012428723300017939Tropical PeatlandLFIIHKDGRLVFRSNMANHRELRQFLDDLVAVDKAAAAGKVLHLQYSERIIAHEADQATHRRIYERAGPKAFEDYWAKRPENRNRWP
Ga0187776_1105876913300017966Tropical PeatlandLDGRVHRSYGSWPNALFVIHKDGRLIFRSNMANLRELRQFLDDLLIADRAAADGRVLHLQYSERVVAHEADQATHRRVYERAGPKAFEDYWARRPQHRNRWP
Ga0184610_108574623300017997Groundwater SedimentANHGELRQFLEDVRAAEKAAADGKVLHLQYSERVVPHEADQATHRRVYERAGPKAFEDYWAKRPQNRNRWP
Ga0184621_1009030413300018054Groundwater SedimentGRLIFRSNMANDREVRQFLDDLVAAEKAADEGRVLHLQYSERVIAHEADQATHRRVYERAGPKAFEDYWAKRPQNRNRWP
Ga0184618_1047816823300018071Groundwater SedimentHLDGRIHRTYGVWPNALFVIHKDGRLIFRSNMTSRRELREFIDSLLAAEKAAADGRVTHLQYSERVLPHEADQATHRRVYDRAGPKAFEDYWAKRPQNRNRWP
Ga0184640_1007242123300018074Groundwater SedimentFPVVVDHLDGRIHRAYGAWPNALFVVHKDGRLIFRSNMANHGELRQFLEDLLVAEKAAADGKVLHLQYSERVVPHEADQATHRRVYERAGPKAFEDYWAKRPQNRNRWP
Ga0184632_1046234113300018075Groundwater SedimentFRSNMANDRELRQFLEELLATERAAADGRVLHLRYSERVILHEADQATHRRVYERAGPKAFEDYWAKRPQHRNRWP
Ga0184609_1005395713300018076Groundwater SedimentDHLDGRIHRAYGVWPNALFVIHKDGRLVFRSNMANDHELRQFLDDLFAAENAAAVGRVLHLQYSERVIAHEADQATHRRVYERAGPKAFEDYWAKRPQNRNRWP
Ga0184609_1034682323300018076Groundwater SedimentRAYGAWPNALFVVHKDGRLIFRSNMANHGELRQFLEDLLAAEKAAAEGKVLHLQYSERVVPHEANQATHRRVYERAGPKAFEDYWAKRPQNRNRWP
Ga0184633_1017817723300018077Groundwater SedimentDGRLIFRSNMANHAELRQFLQDIVAAEKAAADGRVLHLQYSERVIAHEADQATHRRVYQRAGQKAFEDYWAKRPQNRNRWP
Ga0184627_1005107733300018079Groundwater SedimentFRSNMANDRELRQFLDDLVAAEKAAAEGRVLHLQYSERVIAHVADQATHRRVYERAGPKAFEDYWAKRPQNRNRWP
Ga0190265_1092210813300018422SoilKDGRLIFRSNMANDRELRQFLEDLLAAEEAAADGKVTHLQYSERVLPLVADQATHRRVYERAGPKAFKDYWSKRPQHRNRWP
Ga0190265_1302429623300018422SoilGRLMFRSNMANDRELRQFLGDLLAAEKAAADGQVTHLQYSERVLPHVADQATHRRVYERAGPKAFEDYWSKCPQNRNRWP
Ga0190270_1292727013300018469SoilRAYGVWPNALFVIHKDSRLVFRSNMANHRELRQFLEDMVAAEQAVAAGQVLHLQYSERVIAHVADQATHRRVYQRAGPKAFEDYWAKRPQQRNRWP
Ga0190271_1165869223300018481SoilVIHKDGRLVFRSNMANHRELRQFLEDLVAAEGAVAAGRVLHLQYSERVVAHEADQATHRRVYERAGPKAFADYWAKRPQQRNRWP
Ga0193707_110866113300019881SoilRDLKRLEDVRFPIMVDHLDGRIHRTYGVWPNALFVIHKDGRLIFRSNMTSRHELREFIDSLLAAEKAAADGRVTHLQYSERVLPHEADQATHRRVYERAGPKAFEDYWAKRPQNRNRWP
Ga0210334_1039516213300021859EstuarineKDGRLVFRSNMANHRELRQFLEDIVAAQQAVAAGRVVHLQYSERVVAHEADQATHRRVYERAGPKAFADYWAKRPQQRNRWP
Ga0210143_105985723300025792Natural And Restored WetlandsGRLIFRSNMASARELGHYLEALLSAERAAAEGEVTHLQYSERMLPHVADRATHRRVYERAGRKAFEDYWAKRPQNRNRWP
Ga0207684_1073929413300025910Corn, Switchgrass And Miscanthus RhizosphereVWPNALFVIHKDGRLIFRSNMTSRHELREFIDSLLAAEKAAADGRVTHLQYSERVLPHEADQATHRRVYERAGPKAFEDYWAKRPQNRNRWP
Ga0207644_1016565813300025931Switchgrass RhizosphereNALFIINKDGRLIFRSNMANHRELREFLNDLLDAESACAQGKVTHLQYSERVLPHEADQATHHRVYERAGVKAFEHYWAKRPQHRNRWP
Ga0207665_1027198313300025939Corn, Switchgrass And Miscanthus RhizosphereDGRLIFRSNMANHRELEQFLCDLLAAEKAAADGRVMHLQYSERVLPHEADQATHRRVYERAGPKAFEDYWAKRPQNRNRWP
Ga0207691_1003673513300025940Miscanthus RhizosphereAGSGFIINKDGRLIFRSNMANHRELRDFLNDLLDAESAREQGQVTHLQYSERVLPHEADQATHHRVYERAGVKAFKDYWAKRPQHRNRWP
Ga0207679_1013021513300025945Corn RhizosphereYGVWPNALFVINKDGRLIFRSNMANHRELREFLNDLRDADSACAQGKVTHLQYSERVLPHEADQATHHRVYERAGVKSFEDYWAKRSQHRNRWP
Ga0207640_1021927913300025981Corn RhizosphereFRSNMANHRELRDFLNDLLDAESAREQGQVTHLQYSERVLPHEADQATHHRVYERAGVKAFEDYWAKRPQHRNRWP
Ga0208776_102092913300026014Rice Paddy SoilWPNALFVIHKDGRLIFRSNMASARELRQYLEALLSAERAAAEGEVTHLQYSERMLPHVADRATHRRVYERAGRKAFEDYWAKRPQNRNRWP
Ga0209474_1015042333300026550SoilIFRSNMANDGELRQFLDDLMVAERAAAEERVLHLQYSERIVLHEADQVTHRRVYERAGPKAFEDYWAKRPQNRNRWP
Ga0209842_104711923300027379Groundwater SandKDGRLIFRSNIANDRELRQFLEDLLAAERAAAEGRVLHLQYSERVIPHEADQATHRRVYERAGPKAFEDYWAKRPQHRNRWP
Ga0210000_107780523300027462Arabidopsis Thaliana RhizosphereARELRQYLEALLSAERAAAEGEVTHLQYSERMLPHVADRATHRRVYERAGRKAFEDYWAKRPQNRNRWP
Ga0209592_108664213300027731Freshwater SedimentTSDRELRQFLDDLLAAEKAATDGNVTHLQYSERVLPHVADQATHRRVYARAGPQAFEDYWSKRPQNRNRWP
Ga0209683_1046986623300027840Wetland SedimentIHKDGRLVFRSNMANHGELRQFLQDIIAAEQAVAAGRVVHLQYSERVVAHEADQATHRRVYERAGPKAFADYWAKRPQQRDRWP
Ga0209814_1022850423300027873Populus RhizosphereGRIHRAYGVWPNALFVIHKDGRLIFRSNMANHGELRQFLDDLLAAEKAASEGRVTHLQYSERVMPHEADQATHRRVYERAGPKAFEDYWAKRPQNRNRWP
Ga0209583_1049430423300027910WatershedsGQGTLATFPILVDHLDGRIHQAYGVWPNALFVIHKDGRLIFRSNMANHAELRQFLQDLIAADQAVAAGKVVHLQYSERVVPHEADQETHHRVYERAGKKAFADYWAKRPQQRNRWP
Ga0302046_1011652313300030620SoilLIFRSNMASDRELRQFLNESIEAEEAATVGEVTHLQYSERVLPHVADRATHRRVYERAGPKAFEDYWAKRPQNRNRWP
(restricted) Ga0255312_111625213300031248Sandy SoilVIHKDGRLIFRSNMANHTELRQFLENLIAAERALADGRVLHLQYSERVIAHEADQATHRRVYERAGPKAFEDYWAKRPQNRNRWP
Ga0310888_1058314123300031538SoilNHRELRQFLEDILAAERAVAAGRVVHLQYSERVVAHEADQATHRRVYERAGPKAFVDYWAKRPQNRNRWP
Ga0310886_1050721523300031562SoilDHLDGRIHRAYGVWPNALFIINKDGRLIFRSNMANHRELREFLNDLLDAESACAQGKVTHLQYSERVLPHEADQATHHRVYERAGVKSFEDYWAKRSQHRNRWP
Ga0307468_10016902323300031740Hardwood Forest SoilEDVQLPIIVDALEGTIHRSYGTWPNALFVIHKDGRLIFRSNMANHAELRQFLDDLMAADQAAAEGHVVHLQYSERVVPHEADQATHRRVYERAGPKAFEEYWARRPQHRNRWP
Ga0214473_1133207523300031949SoilQRLEKLEFPVVVDHLDGRIHRAYGAWPNALFVIHKDGRLIYRSNMANHGELRQFLEDVLAAEKAAAEGKELHLQYSERVVPHEADQATHRRVYERAGPKAFEDYWAKRPQNRNRWP
Ga0326597_1081422413300031965SoilHGELRQFLEDVLAAEKAAAEGKELHLQYSERVVPHEADQATHRRVYERAGPKAFEDYWAKRPQNRNRWP
Ga0326597_1115438123300031965SoilLFVVHTDGRLIYRTNMANPRALRQFLEDLLAADRLAAEGGVLHTEYVERLVGHAADQATHRRIYERAGPGAFEDSWKRRPDLRGRWP
Ga0310890_1183183813300032075SoilFRSNMANHRELREFLNDLLDAESACAQGKVTHLQYSERVLPHEADQATHHRVYERAGVKAFEHYWAKRPQHRNRWP
Ga0315281_1016996943300032163SedimentTELRQFLEDIVAAEKAAADGRVLHLQYSERLIAHEADQATHRRVYERAGPKAFEDYWAKRPQNRNRWP
Ga0307472_10224057523300032205Hardwood Forest SoilELEQFLCDLLAAEKAAADGRVMHLQYSERVLPHEADQATHRRVYERAGPKAFEDYWAKRPQNRNRWP
Ga0306920_10346623513300032261SoilIHRSYGTWPNALFVIHKDGRLIFRSNMANHRELRQFLEDLTAADQAAVEGHVLHLQYSERVVAHEADQATHRRVYERAGPKAFEDYWAKRPQHRNRWP
Ga0310812_1058569923300032421SoilRSNMANHRELREFLNDLLDAESARAQGKVTHPQYSERVLPHEADRATHHRVYQRAGVKAFEDYWAKRPQHRNRWP
Ga0335085_1149179013300032770SoilVWPNALFVIHKDGRLIFRSNMANHQELRQFLEDIVAADQAAATGKVLHLQYSERVIAHEADQATHRRVYERAGPKAFEDYWAKRPQNRNRWP
Ga0316605_1239294923300033408SoilRLVFRSNMANHRELRQFLEDILAAERAVAAGRVVHLQYSERVVPHEADQATHRRVYERAGPKAFEDYWAKRPQNRNRWP
Ga0310810_1071644313300033412SoilRIHRAYGVWPNALFVINKDGRLIFRSNMANHRELREFLNDLLDAESARAQGKVTHPQYSERVLPHEADQATHHRVYERAGVKAFEDYWAKRPQHRNRWP
Ga0316630_1121020323300033487SoilMANHRELRQFLEDILAAERAVAAGRVVHLQYSERVVPHEADQATHRRVYERAGPKAFEDYWAKRPQNRNRWP
Ga0364945_0188775_3_2993300034115SedimentMHRSYGTWPNALFVIHKDGRLIFRSNMANDRELRQFLEELLATERAAADGRVLHLQYSERVILHEADQATHRRVYERAGPKAFEDYWAKRPQHRNRWP
Ga0364925_0430742_263_4813300034147SedimentMANHRELRQFLEDIIAAEQAVAAGRVVHLQYSERVVAHEADQATHRRVYERAGPKAFEDYWAKRPQNRNRWP

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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