Metagenome / Metatranscriptome Family F049115

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F049115
Family Type	Metagenome / Metatranscriptome
Number of Sequences	147
Average Sequence Length	77 residues
Representative Sequence	MANDGLINLVAWCKRERESLQMQREMLQSGKFRIFKNEGSGQVDTSSDSIERITANITELDAILADYEARGSRA
Number of Associated Samples	125
Number of Associated Scaffolds	147

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	54.17 %
% of genes near scaffold ends (potentially truncated)	36.05 %
% of genes from short scaffolds (< 2000 bps)	86.39 %
Associated GOLD sequencing projects	117
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.76

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (93.878 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (31.293 % of family members)
Environment Ontology (ENVO)	Unclassified (32.653 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (51.020 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 53.92% β-sheet: 7.84% Coil/Unstructured: 38.24%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.76
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.76
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Structural matches with SCOPe domains

SCOP family	SCOP domain	Representative PDB	TM-score
a.183.1.1: Nop domain	d2ozbb1	2ozb	0.73472
f.37.1.0: automated matches	d4q4hb1	4q4h	0.73214
a.2.7.1: Seryl-tRNA synthetase (SerRS)	d1seta1	1set	0.7302
a.183.1.0: automated matches	d3nvia_	3nvi	0.72782
a.47.1.1: STAT	d1uura1	1uur	0.72675

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 147 Family Scaffolds
PF01381	HTH_3	4.08
PF03401	TctC	1.36
PF04199	Cyclase	1.36
PF07681	DoxX	1.36
PF03050	DDE_Tnp_IS66	1.36
PF14534	DUF4440	1.36
PF03979	Sigma70_r1_1	1.36
PF13561	adh_short_C2	0.68
PF04392	ABC_sub_bind	0.68
PF00816	Histone_HNS	0.68
PF10014	2OG-Fe_Oxy_2	0.68
PF00118	Cpn60_TCP1	0.68
PF01165	Ribosomal_S21	0.68
PF00665	rve	0.68
PF00248	Aldo_ket_red	0.68
PF00313	CSD	0.68
PF13384	HTH_23	0.68
PF01527	HTH_Tnp_1	0.68
PF00216	Bac_DNA_binding	0.68

COG ID	Name	Functional Category	% Frequency in 147 Family Scaffolds
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	1.36
COG1878	Kynurenine formamidase	Amino acid transport and metabolism [E]	1.36
COG2259	Uncharacterized membrane protein YphA, DoxX/SURF4 family	Function unknown [S]	1.36
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	1.36
COG3436	Transposase	Mobilome: prophages, transposons [X]	1.36
COG4270	Uncharacterized membrane protein	Function unknown [S]	1.36
COG0459	Chaperonin GroEL (HSP60 family)	Posttranslational modification, protein turnover, chaperones [O]	0.68
COG0776	Bacterial nucleoid DNA-binding protein IHF-alpha	Replication, recombination and repair [L]	0.68
COG0828	Ribosomal protein S21	Translation, ribosomal structure and biogenesis [J]	0.68
COG2801	Transposase InsO and inactivated derivatives	Mobilome: prophages, transposons [X]	0.68
COG2826	Transposase and inactivated derivatives, IS30 family	Mobilome: prophages, transposons [X]	0.68
COG2916	DNA-binding protein H-NS	Transcription [K]	0.68
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	0.68
COG3316	Transposase (or an inactivated derivative), DDE domain	Mobilome: prophages, transposons [X]	0.68
COG4584	Transposase	Mobilome: prophages, transposons [X]	0.68

NCBI Taxonomy

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Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	93.88 %
Unclassified	root	N/A	6.12 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	93.88 %
Unclassified	root	N/A	6.12 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	93.88 %
Unclassified	root	N/A	6.12 %

Name	Rank	Taxonomy	Distribution
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	68.03 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	22.45 %
Unclassified	root	N/A	6.12 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	68.03 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	19.73 %
Unclassified	root	N/A	6.12 %

Name	Rank	Taxonomy	Distribution
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	68.03 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	12.93 %
Unclassified	root	N/A	6.12 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	2.72 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	68.03 %
Unclassified	root	N/A	6.12 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	3.40 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2.72 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	68.03 %
Unclassified	root	N/A	6.12 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2.72 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.36 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001108\|JGI12647J13326_102202	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	704	Open in IMG/M
3300001178\|JGI12646J13576_102460	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	699	Open in IMG/M
3300001545\|JGI12630J15595_10049662	All Organisms → cellular organisms → Bacteria → Proteobacteria	840	Open in IMG/M
3300005165\|Ga0066869_10041555	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	781	Open in IMG/M
3300005168\|Ga0066809_10032967	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1103	Open in IMG/M
3300005174\|Ga0066680_10418133	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	850	Open in IMG/M
3300005332\|Ga0066388_102089794	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1019	Open in IMG/M
3300005536\|Ga0070697_101837471	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	542	Open in IMG/M
3300005569\|Ga0066705_10309973	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1000	Open in IMG/M
3300005921\|Ga0070766_10520975	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	792	Open in IMG/M
3300005952\|Ga0080026_10244733	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	540	Open in IMG/M
3300006038\|Ga0075365_10495887	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	863	Open in IMG/M
3300006057\|Ga0075026_100726711	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	596	Open in IMG/M
3300006800\|Ga0066660_11294763	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	570	Open in IMG/M
3300006893\|Ga0073928_10052903	Not Available	3648	Open in IMG/M
3300007258\|Ga0099793_10205918	All Organisms → cellular organisms → Bacteria → Proteobacteria	944	Open in IMG/M
3300007788\|Ga0099795_10003606	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3863	Open in IMG/M
3300007788\|Ga0099795_10020394	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2159	Open in IMG/M
3300007788\|Ga0099795_10089000	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1194	Open in IMG/M
3300009038\|Ga0099829_11329975	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	594	Open in IMG/M
3300009088\|Ga0099830_11761101	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	517	Open in IMG/M
3300009089\|Ga0099828_11605777	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	573	Open in IMG/M
3300009137\|Ga0066709_103961666	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	538	Open in IMG/M
3300009143\|Ga0099792_10008831	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4177	Open in IMG/M
3300009143\|Ga0099792_10294461	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	961	Open in IMG/M
3300009143\|Ga0099792_10907705	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	583	Open in IMG/M
3300009610\|Ga0105340_1581223	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	500	Open in IMG/M
3300010333\|Ga0134080_10305447	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	715	Open in IMG/M
3300010361\|Ga0126378_13317331	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	511	Open in IMG/M
3300011003\|Ga0138514_100058186	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	792	Open in IMG/M
3300011269\|Ga0137392_10597162	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	916	Open in IMG/M
3300011269\|Ga0137392_10855465	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	750	Open in IMG/M
3300011271\|Ga0137393_10180676	Not Available	1774	Open in IMG/M
3300011271\|Ga0137393_10796066	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	808	Open in IMG/M
3300011271\|Ga0137393_11044071	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	695	Open in IMG/M
3300012096\|Ga0137389_10508212	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1034	Open in IMG/M
3300012096\|Ga0137389_10705695	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	867	Open in IMG/M
3300012189\|Ga0137388_10351557	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1359	Open in IMG/M
3300012189\|Ga0137388_11230927	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	687	Open in IMG/M
3300012198\|Ga0137364_11061829	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	610	Open in IMG/M
3300012200\|Ga0137382_10849647	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	658	Open in IMG/M
3300012202\|Ga0137363_11045910	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	694	Open in IMG/M
3300012202\|Ga0137363_11230809	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	636	Open in IMG/M
3300012205\|Ga0137362_10538631	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1009	Open in IMG/M
3300012208\|Ga0137376_11416599	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	586	Open in IMG/M
3300012212\|Ga0150985_106023578	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	810	Open in IMG/M
3300012359\|Ga0137385_10727711	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	828	Open in IMG/M
3300012359\|Ga0137385_11403256	Not Available	562	Open in IMG/M
3300012361\|Ga0137360_10054328	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2900	Open in IMG/M
3300012362\|Ga0137361_11293133	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	653	Open in IMG/M
3300012469\|Ga0150984_112489833	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1059	Open in IMG/M
3300012683\|Ga0137398_10878068	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	626	Open in IMG/M
3300012917\|Ga0137395_11154273	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	545	Open in IMG/M
3300012918\|Ga0137396_11022982	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	597	Open in IMG/M
3300012922\|Ga0137394_11316296	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	585	Open in IMG/M
3300012924\|Ga0137413_10762315	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	740	Open in IMG/M
3300012924\|Ga0137413_11761089	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	510	Open in IMG/M
3300012927\|Ga0137416_12174570	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	510	Open in IMG/M
3300012930\|Ga0137407_11795909	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	585	Open in IMG/M
3300012951\|Ga0164300_10377301	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	771	Open in IMG/M
3300012958\|Ga0164299_10350205	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	929	Open in IMG/M
3300012960\|Ga0164301_10147254	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1435	Open in IMG/M
3300012987\|Ga0164307_10736245	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	777	Open in IMG/M
3300016294\|Ga0182041_11452001	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	630	Open in IMG/M
3300016319\|Ga0182033_10361404	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1217	Open in IMG/M
3300016387\|Ga0182040_10894165	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	736	Open in IMG/M
3300018061\|Ga0184619_10286075	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	756	Open in IMG/M
3300018422\|Ga0190265_10039568	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4008	Open in IMG/M
3300018431\|Ga0066655_11213594	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	535	Open in IMG/M
3300018433\|Ga0066667_10798366	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	802	Open in IMG/M
3300018466\|Ga0190268_10509590	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	820	Open in IMG/M
3300019887\|Ga0193729_1172718	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	762	Open in IMG/M
3300020140\|Ga0179590_1204728	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	541	Open in IMG/M
3300020170\|Ga0179594_10083195	All Organisms → cellular organisms → Bacteria	1131	Open in IMG/M
3300020580\|Ga0210403_10127969	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2070	Open in IMG/M
3300020583\|Ga0210401_11304979	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	584	Open in IMG/M
3300021088\|Ga0210404_10144750	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1241	Open in IMG/M
3300021170\|Ga0210400_10045245	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3419	Open in IMG/M
3300021403\|Ga0210397_11501323	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	523	Open in IMG/M
3300021407\|Ga0210383_11293453	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	610	Open in IMG/M
3300021418\|Ga0193695_1077911	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	718	Open in IMG/M
3300021432\|Ga0210384_10581398	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1007	Open in IMG/M
3300021475\|Ga0210392_10243112	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1272	Open in IMG/M
3300021478\|Ga0210402_10875206	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	825	Open in IMG/M
3300022533\|Ga0242662_10271323	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	557	Open in IMG/M
3300022557\|Ga0212123_10134595	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1937	Open in IMG/M
3300024330\|Ga0137417_1446020	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2158	Open in IMG/M
3300025929\|Ga0207664_11398070	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	620	Open in IMG/M
3300026304\|Ga0209240_1022442	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2417	Open in IMG/M
3300026319\|Ga0209647_1317205	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	525	Open in IMG/M
3300026320\|Ga0209131_1007550	All Organisms → cellular organisms → Bacteria	6870	Open in IMG/M
3300026320\|Ga0209131_1049924	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2365	Open in IMG/M
3300026320\|Ga0209131_1050449	Not Available	2350	Open in IMG/M
3300026341\|Ga0257151_1004376	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1442	Open in IMG/M
3300026341\|Ga0257151_1007833	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1107	Open in IMG/M
3300026351\|Ga0257170_1008638	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1241	Open in IMG/M
3300026355\|Ga0257149_1028407	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	781	Open in IMG/M
3300026356\|Ga0257150_1004685	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1818	Open in IMG/M
3300026356\|Ga0257150_1009679	Not Available	1301	Open in IMG/M
3300026377\|Ga0257171_1047840	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	740	Open in IMG/M
3300026467\|Ga0257154_1004057	All Organisms → cellular organisms → Bacteria	1850	Open in IMG/M
3300026469\|Ga0257169_1022557	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	902	Open in IMG/M
3300026482\|Ga0257172_1017070	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1253	Open in IMG/M
3300026494\|Ga0257159_1015209	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1232	Open in IMG/M
3300026494\|Ga0257159_1046898	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	732	Open in IMG/M
3300026507\|Ga0257165_1066518	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	656	Open in IMG/M
3300026551\|Ga0209648_10144974	All Organisms → cellular organisms → Bacteria → Proteobacteria	1884	Open in IMG/M
3300026557\|Ga0179587_10128331	All Organisms → cellular organisms → Bacteria	1563	Open in IMG/M
3300027174\|Ga0207948_1008229	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1193	Open in IMG/M
3300027310\|Ga0207983_1043213	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	582	Open in IMG/M
3300027439\|Ga0209332_1093554	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	540	Open in IMG/M
3300027535\|Ga0209734_1098681	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	561	Open in IMG/M
3300027591\|Ga0209733_1009687	Not Available	2523	Open in IMG/M
3300027635\|Ga0209625_1121991	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	584	Open in IMG/M
3300027643\|Ga0209076_1005781	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2961	Open in IMG/M
3300027645\|Ga0209117_1110835	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	742	Open in IMG/M
3300027651\|Ga0209217_1047865	All Organisms → cellular organisms → Bacteria → Proteobacteria	1296	Open in IMG/M
3300027651\|Ga0209217_1158997	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	623	Open in IMG/M
3300027660\|Ga0209736_1157253	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	602	Open in IMG/M
3300027674\|Ga0209118_1067639	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1034	Open in IMG/M
3300027681\|Ga0208991_1021710	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1939	Open in IMG/M
3300027882\|Ga0209590_10956115	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	536	Open in IMG/M
3300027903\|Ga0209488_10056543	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2893	Open in IMG/M
3300027903\|Ga0209488_10943468	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	602	Open in IMG/M
3300027908\|Ga0209006_10285272	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1413	Open in IMG/M
3300027908\|Ga0209006_10318193	All Organisms → cellular organisms → Bacteria	1324	Open in IMG/M
3300028047\|Ga0209526_10011659	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	6071	Open in IMG/M
3300031231\|Ga0170824_119724008	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	738	Open in IMG/M
3300031446\|Ga0170820_11222117	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	630	Open in IMG/M
3300031545\|Ga0318541_10567914	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	635	Open in IMG/M
3300031546\|Ga0318538_10809710	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	509	Open in IMG/M
3300031744\|Ga0306918_10733627	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	773	Open in IMG/M
3300031781\|Ga0318547_10569333	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	702	Open in IMG/M
3300031890\|Ga0306925_11466723	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	669	Open in IMG/M
3300031910\|Ga0306923_10847014	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1006	Open in IMG/M
3300031941\|Ga0310912_10568358	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	883	Open in IMG/M
3300031942\|Ga0310916_11013050	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	693	Open in IMG/M
3300031945\|Ga0310913_10787837	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	671	Open in IMG/M
3300031954\|Ga0306926_12877797	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	518	Open in IMG/M
3300032035\|Ga0310911_10317427	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	898	Open in IMG/M
3300032205\|Ga0307472_101907649	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	593	Open in IMG/M
3300032261\|Ga0306920_102541046	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	704	Open in IMG/M
3300032261\|Ga0306920_103140148	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	620	Open in IMG/M
3300032892\|Ga0335081_12682092	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	509	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	97.96%
Host-Associated	Host-Associated	2.04%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	94.56%
Aquatic	Environmental → Aquatic	3.40%
Plants	Host-Associated → Plants	2.04%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	93.88%
Sediment	Environmental → Aquatic → Sediment	2.04%
Thermal Springs	Environmental → Aquatic → Thermal Springs	1.36%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	0.68%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.68%
Roots	Host-Associated → Plants → Roots	0.68%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.68%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	77.55%
Loam	Environmental → Terrestrial → Soil → Loam	14.97%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.04%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	1.36%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.36%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	0.68%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.68%
Bulk Soil	Host-Associated → Plants → Roots → Bulk Soil	0.68%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.68%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	40.14%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	29.25%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	13.61%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	8.16%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.04%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	1.36%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.36%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.68%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.68%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	0.68%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.68%
Unclassified	Host-Associated → Plants → Roots → Bulk Soil → Unclassified	0.68%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.68%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	31.29%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	21.09%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	11.56%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	6.12%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	6.12%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	5.44%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.04%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.04%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	1.36%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.36%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	1.36%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.68%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.68%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.68%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.68%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.68%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.68%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.68%
Permafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil	0.68%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.68%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.68%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.68%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	0.68%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.68%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	0.68%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.68%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001108	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M3	Environmental	Open in IMG/M
3300001178	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_M3	Environmental	Open in IMG/M
3300001545	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1	Environmental	Open in IMG/M
3300005165	Soil and rhizosphere microbial communities from Laval, Canada - mgHMC	Environmental	Open in IMG/M
3300005168	Soil and rhizosphere microbial communities from Laval, Canada - mgLPC	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300005952	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-045	Environmental	Open in IMG/M
3300006038	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5	Host-Associated	Open in IMG/M
3300006057	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2012	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300007788	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009610	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT700	Environmental	Open in IMG/M
3300010333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300011003	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t9i015	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300018061	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1	Environmental	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300019887	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c2	Environmental	Open in IMG/M
3300020140	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020170	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021418	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3s2	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300022533	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-7-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300024330	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300026304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_80cm (SPAdes)	Environmental	Open in IMG/M
3300026319	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_60cm (SPAdes)	Environmental	Open in IMG/M
3300026320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cm (SPAdes)	Environmental	Open in IMG/M
3300026341	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-17-A	Environmental	Open in IMG/M
3300026351	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-05-B	Environmental	Open in IMG/M
3300026355	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-02-A	Environmental	Open in IMG/M
3300026356	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-13-A	Environmental	Open in IMG/M
3300026359	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-06-A	Environmental	Open in IMG/M
3300026377	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-10-B	Environmental	Open in IMG/M
3300026467	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-16-A	Environmental	Open in IMG/M
3300026469	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-17-B	Environmental	Open in IMG/M
3300026482	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-16-B	Environmental	Open in IMG/M
3300026494	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-07-A	Environmental	Open in IMG/M
3300026507	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-12-B	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027174	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF040 (SPAdes)	Environmental	Open in IMG/M
3300027310	Soil and rhizosphere microbial communities from Laval, Canada - mgHMB (SPAdes)	Environmental	Open in IMG/M
3300027439	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M1 (SPAdes)	Environmental	Open in IMG/M
3300027535	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M2 (SPAdes)	Environmental	Open in IMG/M
3300027591	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M1 (SPAdes)	Environmental	Open in IMG/M
3300027635	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_M2 (SPAdes)	Environmental	Open in IMG/M
3300027643	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3 (SPAdes)	Environmental	Open in IMG/M
3300027645	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2 (SPAdes)	Environmental	Open in IMG/M
3300027651	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027660	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M3 (SPAdes)	Environmental	Open in IMG/M
3300027674	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M1 (SPAdes)	Environmental	Open in IMG/M
3300027681	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM3_M2 (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12647J13326_1022021	3300001108	Forest Soil	LQCILAAKREQEMANDGLINLVAWCKRERESLQMQREMLQSGKFRIFKNEGSGQVDTSSDSIERITANITELDAILADYEARGSRA*
JGI12646J13576_1024602	3300001178	Forest Soil	MANDGLINLVAWCKRERESLQMQREMLQSGKFRIFKNEGSGQVDTSSDSIERITANITELDAILADYEARGFRA*
JGI12630J15595_100496622	3300001545	Forest Soil	MRNDGLINLVAWCKRERESLQMQREMLQSGKFRIFKNEGSGQVDTSSDSIERITANITELDAILADYEARGSRA*
Ga0066869_100415551	3300005165	Soil	AKREQEMANDGLINLVAWCKRERESLQMQREMLQSGKFRIFKNEGSGQVDTSSDSIERITANITELDAILADYEARCSRA*
Ga0066809_100329673	3300005168	Soil	LQCIFAAKREQEMANDGLINLVAWCKRERESLQMQREMLQSGKFRIFKNEGSGQVDTSSDSIGRITANITELDAILADYEARGSRA*
Ga0066680_104181331	3300005174	Soil	MDALVRLLDWCKRERESLQMQREMLQSGKFRIFKDEGSGQVDASAEIIGRIGANITELDSVLDECKMRPSGAQSS*
Ga0066388_1020897942	3300005332	Tropical Forest Soil	MQEQEMANEGNLVAWCKRERESLQMQREMLQSGKFRILKDEGSGQVDTTSESIERITANINELDAILADYEASVPRA*
Ga0070697_1018374711	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	GLINLVAWCKRERESLQMQREMLQSGKFRIFKNEGSGQVDTSSDSIERITANITELDAILADYEARGSRA*
Ga0066705_103099731	3300005569	Soil	MANEGLIKLVAWCKREREGLQMQREMLQSGKFRIFKNEGSGQVDTSSDSIERITANIAELDAILADYEAPGSRA*
Ga0070766_105209753	3300005921	Soil	MANDGLINLVAWCKRERESLQMQREMLQSGKFRIFKNEGSGQVDTSSDSIERITANITELDAILADYEARGSRA*
Ga0080026_102447331	3300005952	Permafrost Soil	SHAAANQCMLADKQGQVMSNEGLINLLGWCKREQESLQMQREMLRSGKFRLFKDEGSGQVDVSSESIARITANLAELHLILADYDVRSSHAPEFLKVSSTPPT*
Ga0075365_104958871	3300006038	Populus Endosphere	MADGGLINLVGWCKRERDSLQMQREMLQSGKFRIYKDEGSGQVDVSFECIKQITNNIAELDLILKDYEARSLGA*
Ga0075026_1007267112	3300006057	Watersheds	MANEGLINLLGWSRRERERLQMQREMLQSGKFKILKDEGSGPIDVSSQNIAQITANIAELDLILADYDVRSSSNDD*
Ga0070765_1007271151	3300006176	Soil	KHERESLQMQREMLQSGKFRIYKDEGSGQVDASSESIERITANMAELDRLLADYDAGSSKG*
Ga0066660_112947631	3300006800	Soil	MANDGLINLVAWCKRERESLQMQREMLQSGKFRIFKNEGSGQVDTSSESIERITANITELDAVLADYEARGSRA*
Ga0073928_100529036	3300006893	Iron-Sulfur Acid Spring	MDALINLLNWCKRERESLQMQREMLQSGKFRIYKDEGSGQVDASSESIERITANIAELDRLMADYDARSSKG*
Ga0099793_102059182	3300007258	Vadose Zone Soil	MDSLVRLLDWCKRERESLQMQREMLQSGKFRIFKDEGSGQVDASSEIIGRIGANITELDSVLDECKMMASGAQRS*
Ga0099795_100036064	3300007788	Vadose Zone Soil	MDGLVRLLDWCKRERESLQMQREMLQSGKFRIFKDEGSGQVDASSEIIGRIGANITELDSVLDECKMMPSGAQRS*
Ga0099795_100203944	3300007788	Vadose Zone Soil	HMIQELSGRTLRLLDWCKRERESLQMQREMLQSGKFRIFKDEGSGQVDASSEIIRRIGANITELDSLLEECK*
Ga0099795_100890001	3300007788	Vadose Zone Soil	VSNFAQTPLGPYALQCILAAKREQEMANDGLINLVAWCKRERESLQMQREMLQSGKFRIFKNEGSGQVDTSSDSIERITANITELDAILADYEARGSRA*
Ga0099829_113299751	3300009038	Vadose Zone Soil	VYAAAKREQEMVNEGLINLVAWCKRERESLQMQREMLQSGKFIIFKNEGSGQVNTSSEIIERITANIAELDAVL
Ga0099830_117611012	3300009088	Vadose Zone Soil	INLVAWCKRESLQMQREMLQSGKFRIFKNEGSGQVDTSSESIERITANITELDAILADYEARGSRA*
Ga0099828_116057773	3300009089	Vadose Zone Soil	PAAKREQEMANEGLINLVAWCKRERESLQMQREMLQSGKFRIFKNEGSGQVDTSSESIERITANITELDAILADYEARGSRA*
Ga0066709_1039616662	3300009137	Grasslands Soil	GLIKLVAWCKREREGLQMQREMLQSGKFRIFKNEGSGQVDTSSDSIERITANIAELDAILADYEARGSRA*
Ga0099792_100088314	3300009143	Vadose Zone Soil	MDGLVRLLDWCKRERESLQVQREMLQSGKFRIFKDEGSGQVDASSEIIGRIGANITELDSVLDECKMMPSGAQRS*
Ga0099792_102944613	3300009143	Vadose Zone Soil	LIMDSLVRLLDWCNRERESLQMQREMLQSGKFRIFKDEGSGQVDASSEIIGRIGANITELDSLLDEYKMRRSGAQSS*
Ga0099792_109077052	3300009143	Vadose Zone Soil	MANEGLINLVAWCKRERESLQMQREMLQSGKFRIFKNEGSGQVDTSSDSIERITANITELDAILADYEARGSRA*
Ga0105340_15812232	3300009610	Soil	MANEALINFVAWCKRERESLQMQREMLQLGKFRIFKNEGSGQIDTSSEIIKRITTNIAELDAILTDYEARGSRA*
Ga0134080_103054471	3300010333	Grasslands Soil	EMANDGLINLVAWCKRERESLQMQREMLQSGKFRIFKNEGSDQVDTSSESIERITANITELDAILADYEARGSRA*
Ga0126378_133173311	3300010361	Tropical Forest Soil	MQEQEMANEGNLVAWCKRERESLQMQREMLQSGKFHILKDEGSGQIDTTSESIERITANINELDAILADYEASAPRA*
Ga0138514_1000581861	3300011003	Soil	PHQASILALAKRERESLQMQREMLQSGKFRIFKNEGSGQVDTSSDSIERITANITELDAILADYEARGSRA*
Ga0137392_105971621	3300011269	Vadose Zone Soil	ELIMDGLVRLLDWCKRERESLQMQREMLQSGKFRIFKDEGSGQVDASLEIIRRIGANITELDSLLDECKMRPSGAQKS*
Ga0137392_108554651	3300011269	Vadose Zone Soil	MLAAKQEQEMSNEGLINLVAWCKRESLQMQREMLQSGKFRIFKNEGSGQVDTSSESIERITANITELDAILADYEARGSRA*
Ga0137393_101806762	3300011271	Vadose Zone Soil	MDGLVRLLDWCKRERESLQVQREMLQSGKFRIFKDEGSGQVDASSEIIGRIGANITELDSVLDECKMMPSAAQRS*
Ga0137393_107960661	3300011271	Vadose Zone Soil	MDGLVRLLDWCKRERESLQMQREMLQSGKFRIFKDEGSGQVDASSEIIGRIGANITDLDSVLDDCKMMPSGARSS*
Ga0137393_110440712	3300011271	Vadose Zone Soil	MPAAKQEQEMANEGLINLVAWCKRERESLQMQREMLQSGKFRIFKNEGSGQVDTSSESIERITANITELDAILADYEARGSRV*
Ga0137389_105082122	3300012096	Vadose Zone Soil	MDGLVRLLDWCKRERESLQMQQEMLQSGKFRIFKDEGSGQVDASSEIIGRIGANITELDSLLDECKMRPSGAQKS*
Ga0137389_107056952	3300012096	Vadose Zone Soil	MPAAKREQEMANEGLINLVAWCKRERESLQMQREMLQSGKFRIFKNEGSGQVDTSSESIERITANITELDAILADYEARVPAPKGAA*
Ga0137388_103515572	3300012189	Vadose Zone Soil	MDALVRLLDWCKRERDSLQMQREMLQSGKFRIFKDEGSGQVDASSDIIGRISANITELDSLLDDCKMRPSGFAQKS*
Ga0137388_112309272	3300012189	Vadose Zone Soil	MPAAKREQEMANEGLINLVAWCKRERESLQMQREMLQSGKFRIFKNEGSGQVDTSSESIERITANITELDAILADYEARGSRA*
Ga0137364_110618291	3300012198	Vadose Zone Soil	MLAAKQEQEMSNEGLINLVAWCKRERESLQMQREMLQSGKFRIFKNEGSDQVDTSSESIERITANITELDAILADYEARGSRA*
Ga0137382_108496472	3300012200	Vadose Zone Soil	MDALAKLLDWCKRERESLQMQREMLQSGKFQIFKDEGSGKVDASSEIIGRIGTNITELDRLLDEYKKMPSDAQRS*
Ga0137363_110459103	3300012202	Vadose Zone Soil	LVRLLDWCKRERESLQMQREMLQSGKFRIFKDEGSGQVDASSEIIRRIGANITELDSLLEECK*
Ga0137363_112308092	3300012202	Vadose Zone Soil	MLAAKQEQEMSNEGLINLVAWCKRESLQMQREMLQSGKFRIFKNEGSGQVDTSSDSIERITANITELDAILADYEARGSRA*
Ga0137362_105386312	3300012205	Vadose Zone Soil	RERESLQMQREMLQSGKFRIFKDEGSGQVDASSEIIGRIGANITELDSLLDEYKMGRSGAQRS*
Ga0137376_114165991	3300012208	Vadose Zone Soil	VLLHGTFSHYIPIQRMLAAKREEAMANEALINLVAWCKRERESLQMQREMLQSGKFHIFKNEGSGQVDTSSDSIERITANITELDAILADYEARGSRA*
Ga0150985_1060235781	3300012212	Avena Fatua Rhizosphere	MANEGLINLVGWCKRERESLQMQREMLKSGKFRIFKDEGSGQVDVSSESIEQITTNISEFDVILKDFEARSLRG*
Ga0137385_107277111	3300012359	Vadose Zone Soil	HYIPIQCMLAAKQEQEMSNEGLINLVAWCKRERESLQMQREMLQSGKFRIFKNEGSGQVDTSSDSIGRITANITELDAILADYEARGSRA*
Ga0137385_114032562	3300012359	Vadose Zone Soil	MANEELINLLGWCKREQESLQMQRKMLQSGKFRLFKDEGSGQVDVSSESIARIAANIAELDLILA
Ga0137360_100543282	3300012361	Vadose Zone Soil	MDSLVRLLDWCKRERESLQMQREMLQSGKFRIFKDEGSGQVDASSEIIRRIGANITELDSLLEECK*
Ga0137361_112931331	3300012362	Vadose Zone Soil	INLVAWCKRERESLQMQREMLQSGKFRIFKNEGSGQVDTSSESIERITANITELDAILADYEARGSRA*
Ga0150984_1124898331	3300012469	Avena Fatua Rhizosphere	MANEGLINLVGWCKRERESLQMQREMLKSGKFRIFKDEGSGQVDVSSESIEQITTNISELDVILKDFEARSLRG*
Ga0137398_108780682	3300012683	Vadose Zone Soil	MDSLVRLLDWCKRERESLQMQREMLQSGKFRIFKDGGSGQVDASSEIIRRIGANITELDSLLEECK*
Ga0137395_108635051	3300012917	Vadose Zone Soil	DWCKRERESLQMQREMLQSGKFRIFKDEGSGQVDASSEIIGRIGANITELDSLLHECE*
Ga0137395_111542731	3300012917	Vadose Zone Soil	KRERESLQMQREMLQSGKFRIFKDEGSGQVDASSEIIGRIAANITELDSVLDECKMKPAGAQRS*
Ga0137396_110229822	3300012918	Vadose Zone Soil	MLAAKQEQEMSNEGLINLVAWCKRERESLQMQREMLQSGKFRIFKNEGSGQVDTSSDSIERITANITELDAILADYEARGSRA*
Ga0137394_113162962	3300012922	Vadose Zone Soil	MDSLVRLLDWCKRERESLQMQREMLQSGKFRIFKDEGSGQVDASSEIIGRIGANITELDSLLDECKMSSGAQKS
Ga0137413_107623152	3300012924	Vadose Zone Soil	MDSLVRLLDWCKRERESLQMQREMLQSGKFRIFKDEGSGQVDASSEIIGRIGANITELDSLLHECE*
Ga0137413_117610891	3300012924	Vadose Zone Soil	MADDVLINLVGWCKRERDSLQMQREMLQSSKFRIFKDEGSGQVDVSYECIKQITTNIAELDLILKDYEARSLGA*
Ga0137416_121745702	3300012927	Vadose Zone Soil	LPGVSNFAQTPLGPYALQCILAAKREQEMANDGLINLVAWCKRERESLQMQREMLQSGKFRIFKNEGSGQVDTSSDSIERITANITELDAILADYEARGSRA*
Ga0137407_117959092	3300012930	Vadose Zone Soil	MLAAKREQEMANEGLINLVAWCKRESLQMQREMLQSGKFRIFKNEGSGQVDTSSESIERITANITELDAILADYEARGSRA*
Ga0164300_103773012	3300012951	Soil	VSNFAQTPLGLCALQCIFAAKRAQEMANDGLINLVAWCKRERESLQMQREMLQSGKFRIFKNEGSGQVDTSSDSIERITANITELDAILADYEARGSRA*
Ga0164299_103502051	3300012958	Soil	VSNFAQTPLGPYALQCIFAAKREQEMANDGLINLVAWCKRERESLQMQREMLQSGKFRIFKNEGSGQVDTSSDSIERITANITELDAILADYEARGSRA*
Ga0164301_101472542	3300012960	Soil	VSNFAQTPLGLCALQCIFAAKREQEMANDGLINLVAWCKRERESLQMQREMLQSGKFRIFKNEGSGQVDTSSDSIERITANITELDAILADYEARGSRA*
Ga0164307_107362453	3300012987	Soil	GVSNFAQTPLGLCALQCIFAAKRAQEMANDGLINLVAWCKRERESLQMQREMLQSGKFRIFKNEGSGQVDTSSDSIERITANITELDAILADYEARGSRA*
Ga0182041_114520011	3300016294	Soil	AGNAVDRSAQHRLALPTKREQEMANEGLTNLLAWCKHERESLQMQREMLQSGKFHILKDEGSGQIDTTSESIERITANINELDAILADYEASAPRA
Ga0182033_103614043	3300016319	Soil	MANEGNLVAWCKRERESLQMQREMLQSGKFHILKDEGSGQIDTTSESIERITANINELDAILADYEASAPRA
Ga0182040_108941652	3300016387	Soil	MANEALTNLLAWCKRERESLQMQREMLQSGEFHILKDEGSSQIDTTSESIERITANINELDAILADYEASAPRA
Ga0184619_102860751	3300018061	Groundwater Sediment	MANDGLINLVAWCKRERESLQMQWEMLQSGKFRIFKNEGSGQVDTSSDSIGRITANITELDAILADYEARGSRA
Ga0190265_100395684	3300018422	Soil	MASEALVNLLNWCKRERESLQMQREMLQSGRVRILENDGSGQRDLSDESIKQITANIAELDAIVADYETKRA
Ga0066655_112135941	3300018431	Grasslands Soil	MVNDGINLLAWCKRERERLQMQREMLQSGKFRIFKNEGSGQVDTSSESIERITANITELDAILADYEARGSRA
Ga0066667_107983661	3300018433	Grasslands Soil	QTPLGPYALQCMLAAKREQEMANDGLINLVAWCKRERESLQMQREMLQSGKFRIFKNEGSGQVDTSSESIERITANITELDAILADYEARSSRA
Ga0190268_105095902	3300018466	Soil	MASEALVNLLNWCKRERESLQMQREMLQSGRVRILENDGSGQRDLSDESIKQITTNITELDAIVVDYETKRP
Ga0193729_11727183	3300019887	Soil	WCKRERESLQMQREMLQSGKFRIFKNEGSGQVDTSSDSIERITANITELDAILADYEARGSRA
Ga0179590_12047281	3300020140	Vadose Zone Soil	MANDGLINLVAWCKRERESLQMQREMLQSGKFRIFKNEGSGQVDTSSDSIERITANITELDAILADYEARGARA
Ga0179594_100831951	3300020170	Vadose Zone Soil	MDGLGRLLDWCERERESLQMQREMLQSGKFRIFKDEGSGQVDASSEIIGRIGANITELDSVLEECKMRPSGAQRS
Ga0210403_101279694	3300020580	Soil	MANDGLINLVAWCKRERESLQMQREMLQSGKFRIFKNEGSGQVDTSSDSIERITANITELDAILA
Ga0210401_113049791	3300020583	Soil	GLINLVAWCKRERESLQMQREMLQSGKFRIFKNEGSGQVDTSSDSIERITANITELDAILADYEARGSRA
Ga0210404_101447502	3300021088	Soil	MDALGRLVDWCRREGESLQMQREMLQSGKFRIFKDEGSGQVDASSEIIERISANITELDSLLERIPVWSNRRGFPTSEQ
Ga0210400_100452455	3300021170	Soil	MDGLVRLLDWCKRERESLQMQREMLQSGKFRIFKDEGSGQVDASSEIIGRIGANITELDSVLDEYKS
Ga0210397_115013231	3300021403	Soil	MANDGLINLVAWCKRERESLQMQREMLQSGKFRIFKNEGSGQVDTSSDSIERIMANITELDAILADYEARGSRA
Ga0210383_112934531	3300021407	Soil	ASVYFAAKREQEMANDGLINLVAWCERERESLQMQREMLQSGKFRIFKNEGSGQVDTSSDSIERIMANITELDAILADYEARGSRA
Ga0193695_10779111	3300021418	Soil	REQEMANEGLINLVAWCKRERESLQMQREMLQSGKFRIFKNEGSGQVDTSSDSIERITANITELDAILADYEARGFRA
Ga0210384_105813981	3300021432	Soil	MDALGRLVDWCRREGESLQMQREMLQSGKFRIFKDEGSGQVDASSEIIERISANITELDSLLDECKVRPSDAQTS
Ga0210392_102431122	3300021475	Soil	MANDGLINLVAWCKRERESLQMQREMLQSGKFRIFKNEGSGQVDTSSDSIERITANITELDAILVDYEARGSR
Ga0210402_108752061	3300021478	Soil	MDGLARLLDWCERERESLQMQREMLQSGKFRIFKDEGSGQVDASSEIISRIAANITELDSVLEECKMRPSGAQRA
Ga0242662_102713232	3300022533	Soil	ANDGLINLVAWCKRERESLQMQREMLQSGKFRIFKNEGSGQVDTSSDSIERITANITELDAILADYEARGSRA
Ga0212123_101345953	3300022557	Iron-Sulfur Acid Spring	MDALINLLNWCKRERESLQMQREMLQSGKFRIYKDEGSGQVDASSESIERITANIAELDRLMADYDARSSKG
Ga0137417_14460204	3300024330	Vadose Zone Soil	MDSLVRLLDWCRRERESLQMQREMLQSGKFRIFKDEGSGQVDASSEIIRRIGATITELDSLLHECE
Ga0207664_113980701	3300025929	Agricultural Soil	VSNFAQTPLGLCALQCIFAAKRAQEMANDGLINLVAWCKRERESLQMQREMLQSGKFRIFKNEGSGQVDTSSDSIERITANITELDAILADYEARGSRA
Ga0209240_10224422	3300026304	Grasslands Soil	MDGLVRLLDWCKRERESLQMQREMLQSGKFRIFKDEGSGQVDASSEIIGRIGANITALDSVLDERKMMPSGAQRS
Ga0209647_13172052	3300026319	Grasslands Soil	MDGLVRLLDWCKRERESLQMQREMLQSGKFRIFKDEGSGQVDASSEIIGRIGANITELDSVLDECKMMASGAQRS
Ga0209131_10075506	3300026320	Grasslands Soil	MDGLVRLLDWCKRERESLQMQREMLQSGKFRIFKDEGSGQVDASSEIIGRIGANITELDSVLDECKMMPSGAQRS
Ga0209131_10499242	3300026320	Grasslands Soil	MDGLVRLLDWCKRERETLQMQREMLQSGKFRIFKGEGSGQVDASSEIIGRIGANITELDSVLDECKMMASGAQRS
Ga0209131_10504493	3300026320	Grasslands Soil	MDGLVRLLDWCKRERESLQMQREMLQSGKFRIFKDEGSGQVDASSEIIGRIRANLTELDSVLDECKMMPSGARRS
Ga0257151_10043762	3300026341	Soil	MDALGRLVDWCRREGESLQMQREMLRSGKFRIFKDEGSGQVDASSEIIERISANITELDSLLDECKVRPSDAQTS
Ga0257151_10078331	3300026341	Soil	LLDWCKRERESLQMQREMLRSGKFRIFKDEGSGQVDASSEIIERITANITELDSLLDEYKMRPSDAKGS
Ga0257170_10086384	3300026351	Soil	MDSLVRLLDWCKRERESLQMQREMLQSGKFRIFKDEGSGQVDASSEIIGRIGANITELDSLLHECE
Ga0257149_10284071	3300026355	Soil	CKRERESLQMQREMLQSGKFRIFKDEGSGQVDASSEIIGRIAANITELDSVLDECKMKPAGAQRS
Ga0257150_10046852	3300026356	Soil	MDGLVRLLDWCKRERESLQMQREMLRSGKFRIFKDEGSGQVDASSEIIGRIGANITELDSVLDECKMMPSGAQRS
Ga0257150_10096792	3300026356	Soil	MDGLVRLLDWCKRERESLQMQREMLQSGKFRIFKDEGSGQVDASSEIIGRIGANITDLDSVLDDCKMMPSGARSS
Ga0257163_10545771	3300026359	Soil	MDGLVRLLDWCKRERESLQMQREMLQSGKFRIFKDEGSGQVDASSEIIGRIGANITDLDSVL
Ga0257171_10478402	3300026377	Soil	MDGLVRLLDWCKRERESLQMQREMLQSGKFRIFKDEGSGQVDASSEIIGRIGANITELDSLLHECE
Ga0257154_10040571	3300026467	Soil	MDGLVRLLDWCKRERESLQMQREMLQSGKFRIFKDEGSGHVDASSEIIERISANITELDSLLDECKMRPAEAQRS
Ga0257169_10225572	3300026469	Soil	VRLLDWCKRERESLQMQREMLQSGKFRIFKDEGSGQVDASSEIIGRIGANITELDSVLDECKMMPSGAQRS
Ga0257172_10170701	3300026482	Soil	MDGLVRLLDWCKRERESLQMQREMLQSGKFRIFKDEGSGQVDASSEIIGRIAANITELDSVLDECKMKPAGAQRS
Ga0257159_10152092	3300026494	Soil	MDGSVRLLDWCKRERESLQMQREMLQSGKFRIFKDEGSGQVDASSEIIGRIAANITELDSVLDECKMKPAGAQRS
Ga0257159_10468981	3300026494	Soil	MDGLVRLLDWCKRERESLQMQREMLQSGKFRIFKDEGLGQVDASSEIIGRIGANITDLDSVLDDCKMMPSGARSS
Ga0257165_10665183	3300026507	Soil	VRLLDWCKRERESLQMQREMLQSGKFRIFKDEGSGQVDASSEIIGRIGANITELDSLLHECE
Ga0209648_101449743	3300026551	Grasslands Soil	MDGLVRLLDWCERERESLQMQREMLQSGKFRIFKDEGSGQVDASSEIIGRIGANITELDSVLDECKMRPSGAQRS
Ga0179587_101283312	3300026557	Vadose Zone Soil	MDSLVRLLDWCKRERESLQMQREMLQSGKFRIFKDEGSGQVDASSEIIGGIGANITELDSLLAWISTEANRPNVKIA
Ga0207948_10082293	3300027174	Forest Soil	VSNFAQTPLGPNALQCIFAAKREQEMANDGLINLVAWCKRERESLQMQREMLQSGKFRIFKNEGSGQVDTSSDSIERITANITELDAILADYEARGSRA
Ga0207983_10432131	3300027310	Soil	EMANDGLINLVAWCKRERESLQMQREMLQSGKFRIFKNEGSGQVDTSSDSIERITANITELDAILADYEARGSRA
Ga0209332_10935541	3300027439	Forest Soil	YIPLQCMLPAKREQEMANDGLINLVAWCKRERESLQMQREMLQSGKFRIFKNEGSGQVDTSSDSIERITANITELDAILADYEARGFRA
Ga0209734_10986812	3300027535	Forest Soil	YIPLQCMLPAKREQEMANEGLINLVAWCKRERESLQMQWEMLQSGKFRIFKNEGSGQVDTSSDSIERITANITELDAILADYEARGSRA
Ga0209733_10096872	3300027591	Forest Soil	MRNDGLINLVAWCKRERESLQMQREMLQSGKFRIFKNEGSGQVDTSSDSIERITANITELDAILADYEARGSRA
Ga0209625_11219911	3300027635	Forest Soil	MANDGLINLVAWCKRERESLQMQREMLQSGKFRIFKNEGSGQVDTSSDSIERITANITELDAILADYEARGFRA
Ga0209076_10057812	3300027643	Vadose Zone Soil	MDSLVRLLDWCKRERESLQMQREMLQSGKFRIFKDEGSGQVDASSEIIGRIGANITELDSVLDECKMMPSGAQRS
Ga0209117_11108353	3300027645	Forest Soil	EGLINLVAWCKRERESLQMQWEMLQSGKFRIFKNEGSGQVDTSSDSIERITANITELDAILADYEARGSRA
Ga0209217_10478655	3300027651	Forest Soil	EMANEGLINLVAWCKRERESLQMQREMLQSGKFRIFKNEGSGQVDTSSDSIERITANITELDAILADYEARGFRA
Ga0209217_11589971	3300027651	Forest Soil	MANEGLINLVAWCKRERESLQMQREMLQSGKFRIVKDEGSGQVDTSSESIERITANMAELDGALSSLPQGV
Ga0209736_11572532	3300027660	Forest Soil	GTLSHYIPLQRMLAAKREQEMASEGLINLVAWCKRERESLQMQREMLQSGKFRIFKNEGSGQVDTSSDSIERITANITELDAILADYEARGSRA
Ga0209118_10676391	3300027674	Forest Soil	GTFSHYIPLQCMLAAKREQEMANEALINLVAWCKRERESLQMQREMLQSGKFRIFKNEGSGQVDTSSDSIGRITANITELDAILADYEARGSRA
Ga0208991_10217101	3300027681	Forest Soil	VYSAKREQEMRNDGLINLVAWCKRERESLQMQREMLQSGKFRIFKNEGSGQVDTSSDSIERITANITELDAILADYEARGSRA
Ga0209590_109561152	3300027882	Vadose Zone Soil	MDGLVRLLDWCKRERESLQMQREMLQSGKFRIFKDEGSGQVDASSEIIGRIGANITELDSLLDEYKMRRSGAQSS
Ga0209488_100565433	3300027903	Vadose Zone Soil	MAALVKLLDWCKRERESLQMQREMLQSGKFRIFKDEGSGQVDASSEIIGRIGANITELDSLLDEYKMRRSGAQSS
Ga0209488_109434681	3300027903	Vadose Zone Soil	VSNFAQTPLGPYALQCILAAKREQEMANDGLINLVAWCKRERESLQMQREMLQSGKFRIFKNEGSGQVDTSSDSIERITANITELDAILADYEARGSRA
Ga0209006_102852722	3300027908	Forest Soil	MDTLGRLVDWCRREGESLQMQREMLQSGKFRIFKDEGSGQVDASSEIIERISANITELDSLLDECKVRPSDAQTS
Ga0209006_103181932	3300027908	Forest Soil	MANDGLINLVAWCKRERESLQMQREMLQSGKFRIFKNEGSGQVDTSSDSIERITANITELDAILADYEA
Ga0209526_100116596	3300028047	Forest Soil	MDALGRLVDWCRREGESLQMQREMLQSGKFRIFKNEGSGQVDASSEIIERISANITELDSLLDECKVRPSDAQTS
Ga0170824_1197240082	3300031231	Forest Soil	MANDGLINLVAWCKRERESLQMQREMLQSGKFRIFKNEGSGQVDTSSDSIKRITANITELDAILADYEAQGSRA
Ga0170820_112221171	3300031446	Forest Soil	MANDGLINLVAWCKRERESLQMQREMLQSGKFRIFKNEGSGQIDTSSDSIERITANITELDAILADYEARGSRA
Ga0318541_105679142	3300031545	Soil	MLAAMQEQEMANEGNLVAWCKRERESLQMQREMLQSGKFRILKDEGSGQVDTTSESIERITANINELDAILADYEASAPRA
Ga0318538_108097101	3300031546	Soil	AADSNAGDRGAQHRLALPAKREQEMPNEGLTNLLAWCKRERESLQMQREMLQSGKFHILKDEGSGQIDTTSESIERITANINELDAILADYEASAPRA
Ga0306918_107336272	3300031744	Soil	MPNEGLTNLLAWCKRERESLQMQREMLQSGKFHILKDEGSGQIDTTSESIERITANINELDAILADYEASVPRA
Ga0318547_105693331	3300031781	Soil	MPNEGLTNLLAWCKRERESLQMQREMLQSGKFHILKDEGSGQIDTTSESIERITANINELDAILADYEASAPRA
Ga0306925_114667231	3300031890	Soil	DSNAGDRGAQHRLALPAKREQEMPNEGLTNLLAWCKRERESLQMQREMLQSGEFHILKDEGSGQIDTTSESIERITANINELDAILADYEASAPRA
Ga0306923_108470142	3300031910	Soil	MPNEGLTNLLAWCKRERESLQMQREMLQSGEFHILKDEGSGQIDTTSESIERITANINELDAILADYEASAPRA
Ga0310912_105683582	3300031941	Soil	MANEGNLVAWCKRERESLQMQREMLQSGKFRILKDEGSGQVDTTSESIERITANINELDAILADYEASAPRA
Ga0310916_110130501	3300031942	Soil	MANEGLTNLLAWCKRERESLQMQREMLQSGKFHILKDEGSGQIDTTSESIERITANINELDAILADYEASAPRA
Ga0310913_107878372	3300031945	Soil	EKQSEWVGLRFGGAMQEQEMANEGNLVAWCKRERESLQMQREMLQSGKFHILKDEGSGQVDTTSESIERITANINELDAILADYEASAPRA
Ga0306926_128777971	3300031954	Soil	ALPAKREQEMPNEGLTNLLAWCKRERESLQMQREMLQSGEFHILKDEGSGQIDTTSESIERITANINELDAILADYEASAPRA
Ga0310911_103174272	3300032035	Soil	MQEQEMANEGNLVAWCKRERESLQMQREMLQSGKFHILKDEGSGQIDTTSESIERITANINELDAILADYEASAPRA
Ga0307472_1019076491	3300032205	Hardwood Forest Soil	MDGMARLLDWCERERESLQMQREMLQSGKFRIFKDEGSGQVDASSDIIGRIGANITELDSLLDECKMSSGAQKS
Ga0306920_1025410462	3300032261	Soil	MPNEGLTNLLAWCKRERESLQMQREMLQSGEFHILKDEGSGQIDTTSESIERITANINELDAILADY
Ga0306920_1031401481	3300032261	Soil	MANEGNLVAWCKRERESLQMQREMLQSGKFRILKDEGSGQVDTTSESIERITANINELDAILADYEASVPRA
Ga0335081_126820922	3300032892	Soil	EMANDGLTNLVAWCKHERESLQMQREMLQSGKFRILKDEGSGQIDTTSESIERITANINELDAILADYEASASRA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F049115

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences