Metagenome / Metatranscriptome Family F049121

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F049121
Family Type	Metagenome / Metatranscriptome
Number of Sequences	147
Average Sequence Length	62 residues
Representative Sequence	MDLDDTQTTSKGSNPGVFPAKPGDDQKELAWAFLGLILWSGVVLIGVFGAGYVVGHSVLHLW
Number of Associated Samples	108
Number of Associated Scaffolds	147

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	80.82 %
% of genes near scaffold ends (potentially truncated)	27.89 %
% of genes from short scaffolds (< 2000 bps)	79.59 %
Associated GOLD sequencing projects	95
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.41

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (51.020 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (31.293 % of family members)
Environment Ontology (ENVO)	Unclassified (34.014 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (65.986 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 44.44% β-sheet: 0.00% Coil/Unstructured: 55.56%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.41
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.41
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 147 Family Scaffolds
PF00135	COesterase	31.29
PF00155	Aminotran_1_2	11.56
PF13432	TPR_16	2.04
PF01121	CoaE	0.68
PF00589	Phage_integrase	0.68
PF01522	Polysacc_deac_1	0.68
PF03572	Peptidase_S41	0.68
PF05231	MASE1	0.68
PF01784	NIF3	0.68
PF06445	GyrI-like	0.68
PF13442	Cytochrome_CBB3	0.68

COG ID	Name	Functional Category	% Frequency in 147 Family Scaffolds
COG2272	Carboxylesterase type B	Lipid transport and metabolism [I]	31.29
COG0237	Dephospho-CoA kinase	Coenzyme transport and metabolism [H]	0.68
COG0327	Putative GTP cyclohydrolase 1 type 2, NIF3 family	Coenzyme transport and metabolism [H]	0.68
COG0642	Signal transduction histidine kinase	Signal transduction mechanisms [T]	0.68
COG0726	Peptidoglycan/xylan/chitin deacetylase, PgdA/NodB/CDA1 family	Cell wall/membrane/envelope biogenesis [M]	0.68
COG0793	C-terminal processing protease CtpA/Prc, contains a PDZ domain	Posttranslational modification, protein turnover, chaperones [O]	0.68
COG3323	PII-like insert in the uncharacterized protein YqfO, YbgI/NIF3 family	Function unknown [S]	0.68
COG3447	Integral membrane sensor domain MASE1	Signal transduction mechanisms [T]	0.68
COG3851	Signal transduction histidine kinase UhpB, glucose-6-phosphate specific	Signal transduction mechanisms [T]	0.68

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.02 %
All Organisms	root	All Organisms	48.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.02 %
cellular organisms	root	All Organisms → cellular organisms	48.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.02 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	48.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.02 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	27.89 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	4.76 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	1.36 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.02 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4.76 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	3.40 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1.36 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.68 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.02 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	4.08 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	2.72 %
Opitutae	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae	1.36 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.68 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.68 %
Sphingomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.02 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	4.08 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2.72 %
Opitutales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales	0.68 %
Puniceicoccales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Puniceicoccales	0.68 %
Sphingomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	0.68 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.68 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.02 %
Inquilinus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Inquilinus	4.08 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2.72 %
Puniceicoccaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Puniceicoccales → Puniceicoccaceae	0.68 %
Sphingomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas	0.68 %
Opitutaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae	0.68 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.68 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.02 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2.72 %
Pelagicoccus	genus	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Puniceicoccales → Puniceicoccaceae → Pelagicoccus	0.68 %
Inquilinus limosus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Inquilinus → Inquilinus limosus	0.68 %
Opitutus	genus	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae → Opitutus	0.68 %
unclassified Sphingomonas	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas	0.68 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.68 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.02 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2.72 %
Sphingomonas sp. R-74633	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas → Sphingomonas sp. R-74633	0.68 %
unclassified Opitutus	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae → Opitutus → unclassified Opitutus	0.68 %
Pelagicoccus	genus	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Puniceicoccales → Puniceicoccaceae → Pelagicoccus	0.68 %
Inquilinus limosus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Inquilinus → Inquilinus limosus	0.68 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.68 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.02 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2.72 %
Opitutus sp. WL0086	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae → Opitutus → unclassified Opitutus → Opitutus sp. WL0086	0.68 %
Sphingomonas sp. R-74633	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas → Sphingomonas sp. R-74633	0.68 %
Pelagicoccus	genus	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Puniceicoccales → Puniceicoccaceae → Pelagicoccus	0.68 %
Inquilinus limosus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Inquilinus → Inquilinus limosus	0.68 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.68 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.68 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300003505\|JGIcombinedJ51221_10291829	Not Available	663	Open in IMG/M
3300003505\|JGIcombinedJ51221_10474141	Not Available	505	Open in IMG/M
3300004080\|Ga0062385_10927593	Not Available	580	Open in IMG/M
3300004082\|Ga0062384_100970346	Not Available	606	Open in IMG/M
3300004092\|Ga0062389_104794426	Not Available	509	Open in IMG/M
3300005434\|Ga0070709_10070216	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae → Opitutus → unclassified Opitutus → Opitutus sp. WL0086	2257	Open in IMG/M
3300005434\|Ga0070709_11031899	Not Available	655	Open in IMG/M
3300005434\|Ga0070709_11343294	Not Available	577	Open in IMG/M
3300005435\|Ga0070714_100456499	Not Available	1214	Open in IMG/M
3300005437\|Ga0070710_10119403	All Organisms → cellular organisms → Bacteria	1594	Open in IMG/M
3300005533\|Ga0070734_10098434	Not Available	1720	Open in IMG/M
3300005533\|Ga0070734_10868226	Not Available	512	Open in IMG/M
3300005534\|Ga0070735_10120422	Not Available	1640	Open in IMG/M
3300005538\|Ga0070731_10529235	Not Available	785	Open in IMG/M
3300005538\|Ga0070731_10710606	All Organisms → cellular organisms → Bacteria	668	Open in IMG/M
3300005541\|Ga0070733_10384858	Not Available	933	Open in IMG/M
3300005591\|Ga0070761_10007777	All Organisms → cellular organisms → Bacteria	6122	Open in IMG/M
3300005602\|Ga0070762_10158166	Not Available	1360	Open in IMG/M
3300005602\|Ga0070762_10256955	All Organisms → cellular organisms → Bacteria → Acidobacteria	1088	Open in IMG/M
3300005602\|Ga0070762_10633237	Not Available	713	Open in IMG/M
3300005602\|Ga0070762_10881994	Not Available	609	Open in IMG/M
3300005610\|Ga0070763_10575614	Not Available	651	Open in IMG/M
3300005712\|Ga0070764_10290815	Not Available	940	Open in IMG/M
3300005712\|Ga0070764_10718473	Not Available	616	Open in IMG/M
3300005921\|Ga0070766_10031434	All Organisms → cellular organisms → Bacteria	2893	Open in IMG/M
3300005921\|Ga0070766_10412606	All Organisms → cellular organisms → Bacteria → Acidobacteria	886	Open in IMG/M
3300005950\|Ga0066787_10058115	Not Available	757	Open in IMG/M
3300005952\|Ga0080026_10127971	All Organisms → cellular organisms → Bacteria	723	Open in IMG/M
3300005995\|Ga0066790_10064657	All Organisms → cellular organisms → Bacteria	1577	Open in IMG/M
3300006028\|Ga0070717_12085289	Not Available	510	Open in IMG/M
3300006176\|Ga0070765_100177428	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1920	Open in IMG/M
3300006176\|Ga0070765_100472906	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1176	Open in IMG/M
3300006893\|Ga0073928_10002465	All Organisms → cellular organisms → Bacteria	31687	Open in IMG/M
3300006893\|Ga0073928_10135376	All Organisms → cellular organisms → Bacteria	2008	Open in IMG/M
3300006893\|Ga0073928_10292068	All Organisms → cellular organisms → Bacteria → Acidobacteria	1228	Open in IMG/M
3300009665\|Ga0116135_1071783	Not Available	1223	Open in IMG/M
3300010046\|Ga0126384_10611005	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Inquilinus	956	Open in IMG/M
3300010359\|Ga0126376_11443172	Not Available	714	Open in IMG/M
3300010362\|Ga0126377_12505555	Not Available	591	Open in IMG/M
3300010858\|Ga0126345_1087052	Not Available	640	Open in IMG/M
3300010860\|Ga0126351_1292351	Not Available	520	Open in IMG/M
3300010866\|Ga0126344_1226961	All Organisms → cellular organisms → Bacteria → Acidobacteria	838	Open in IMG/M
3300011120\|Ga0150983_15120113	Not Available	522	Open in IMG/M
3300011120\|Ga0150983_16305616	All Organisms → cellular organisms → Bacteria → Acidobacteria	654	Open in IMG/M
3300012180\|Ga0153974_1073753	All Organisms → cellular organisms → Bacteria → Acidobacteria	760	Open in IMG/M
3300012189\|Ga0137388_11317466	All Organisms → cellular organisms → Bacteria → Acidobacteria	661	Open in IMG/M
3300012202\|Ga0137363_11269522	Not Available	624	Open in IMG/M
3300012205\|Ga0137362_10828758	All Organisms → cellular organisms → Bacteria → Acidobacteria	792	Open in IMG/M
3300012582\|Ga0137358_10121193	Not Available	1777	Open in IMG/M
3300012923\|Ga0137359_10794641	Not Available	820	Open in IMG/M
3300012930\|Ga0137407_10147725	Not Available	2074	Open in IMG/M
3300013100\|Ga0157373_10463915	All Organisms → cellular organisms → Bacteria	912	Open in IMG/M
3300014169\|Ga0181531_10125001	All Organisms → cellular organisms → Bacteria → Acidobacteria	1547	Open in IMG/M
3300014169\|Ga0181531_10384333	Not Available	862	Open in IMG/M
3300014201\|Ga0181537_10096792	Not Available	2007	Open in IMG/M
3300014489\|Ga0182018_10000227	All Organisms → cellular organisms → Bacteria	74098	Open in IMG/M
3300014495\|Ga0182015_10015636	All Organisms → cellular organisms → Bacteria	6469	Open in IMG/M
3300014501\|Ga0182024_10001959	All Organisms → cellular organisms → Bacteria → Acidobacteria	51975	Open in IMG/M
3300014501\|Ga0182024_10081744	All Organisms → cellular organisms → Bacteria	4810	Open in IMG/M
3300014501\|Ga0182024_10082393	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4786	Open in IMG/M
3300015242\|Ga0137412_10030723	All Organisms → cellular organisms → Bacteria	4386	Open in IMG/M
3300018060\|Ga0187765_11252695	Not Available	523	Open in IMG/M
3300019258\|Ga0181504_1550019	Not Available	501	Open in IMG/M
3300020170\|Ga0179594_10194176	Not Available	759	Open in IMG/M
3300020579\|Ga0210407_10431527	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Inquilinus	1031	Open in IMG/M
3300020579\|Ga0210407_10562531	All Organisms → cellular organisms → Bacteria → Acidobacteria	890	Open in IMG/M
3300020579\|Ga0210407_10590893	All Organisms → cellular organisms → Bacteria → Acidobacteria	866	Open in IMG/M
3300020580\|Ga0210403_10524305	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Inquilinus	961	Open in IMG/M
3300020582\|Ga0210395_10117727	All Organisms → cellular organisms → Bacteria → Acidobacteria	1971	Open in IMG/M
3300020582\|Ga0210395_10229407	All Organisms → cellular organisms → Bacteria	1394	Open in IMG/M
3300020583\|Ga0210401_10002880	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	18713	Open in IMG/M
3300020583\|Ga0210401_10011083	All Organisms → cellular organisms → Bacteria	8804	Open in IMG/M
3300020583\|Ga0210401_11357901	All Organisms → cellular organisms → Bacteria → Acidobacteria	568	Open in IMG/M
3300020583\|Ga0210401_11464280	Not Available	540	Open in IMG/M
3300021086\|Ga0179596_10386677	Not Available	705	Open in IMG/M
3300021088\|Ga0210404_10310720	All Organisms → cellular organisms → Bacteria → Acidobacteria	869	Open in IMG/M
3300021088\|Ga0210404_10646656	All Organisms → cellular organisms → Bacteria → Acidobacteria	602	Open in IMG/M
3300021168\|Ga0210406_11006397	Not Available	620	Open in IMG/M
3300021171\|Ga0210405_10432792	All Organisms → cellular organisms → Bacteria → Acidobacteria	1035	Open in IMG/M
3300021178\|Ga0210408_11443861	Not Available	517	Open in IMG/M
3300021180\|Ga0210396_11568213	Not Available	539	Open in IMG/M
3300021181\|Ga0210388_10202528	Not Available	1737	Open in IMG/M
3300021181\|Ga0210388_10950734	Not Available	739	Open in IMG/M
3300021181\|Ga0210388_11516553	Not Available	559	Open in IMG/M
3300021181\|Ga0210388_11740792	Not Available	515	Open in IMG/M
3300021384\|Ga0213876_10033719	All Organisms → cellular organisms → Bacteria	2699	Open in IMG/M
3300021384\|Ga0213876_10750717	Not Available	519	Open in IMG/M
3300021401\|Ga0210393_10067819	All Organisms → cellular organisms → Bacteria → Acidobacteria	2812	Open in IMG/M
3300021401\|Ga0210393_11052540	Not Available	658	Open in IMG/M
3300021402\|Ga0210385_10153284	Not Available	1650	Open in IMG/M
3300021403\|Ga0210397_11474873	Not Available	528	Open in IMG/M
3300021404\|Ga0210389_10710845	Not Available	787	Open in IMG/M
3300021404\|Ga0210389_11155044	Not Available	597	Open in IMG/M
3300021405\|Ga0210387_10848676	All Organisms → cellular organisms → Bacteria → Acidobacteria	805	Open in IMG/M
3300021406\|Ga0210386_10067267	All Organisms → cellular organisms → Bacteria → Acidobacteria	2877	Open in IMG/M
3300021407\|Ga0210383_11100796	Not Available	671	Open in IMG/M
3300021432\|Ga0210384_10109735	All Organisms → cellular organisms → Bacteria	2473	Open in IMG/M
3300021432\|Ga0210384_10176966	All Organisms → cellular organisms → Bacteria → Acidobacteria	1917	Open in IMG/M
3300021432\|Ga0210384_11372485	Not Available	612	Open in IMG/M
3300021474\|Ga0210390_11295413	All Organisms → cellular organisms → Bacteria → Acidobacteria	584	Open in IMG/M
3300021559\|Ga0210409_10120673	All Organisms → cellular organisms → Bacteria	2410	Open in IMG/M
3300021559\|Ga0210409_10360640	All Organisms → cellular organisms → Bacteria → Acidobacteria	1305	Open in IMG/M
3300022523\|Ga0242663_1147547	Not Available	503	Open in IMG/M
3300022528\|Ga0242669_1070909	Not Available	631	Open in IMG/M
3300022557\|Ga0212123_10002575	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	42553	Open in IMG/M
3300022557\|Ga0212123_10637148	Not Available	666	Open in IMG/M
3300022715\|Ga0242678_1070428	Not Available	541	Open in IMG/M
3300022722\|Ga0242657_1235076	Not Available	520	Open in IMG/M
3300022724\|Ga0242665_10110247	Not Available	828	Open in IMG/M
3300022726\|Ga0242654_10164669	All Organisms → cellular organisms → Bacteria → Acidobacteria	750	Open in IMG/M
3300022873\|Ga0224550_1048120	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	611	Open in IMG/M
3300025898\|Ga0207692_10517933	All Organisms → cellular organisms → Bacteria → Acidobacteria	759	Open in IMG/M
3300025906\|Ga0207699_11438575	Not Available	510	Open in IMG/M
3300026214\|Ga0209838_1075645	Not Available	511	Open in IMG/M
3300026281\|Ga0209863_10011041	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2860	Open in IMG/M
3300026557\|Ga0179587_10232883	All Organisms → cellular organisms → Bacteria → Acidobacteria	1175	Open in IMG/M
3300027528\|Ga0208985_1012529	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Inquilinus	1613	Open in IMG/M
3300027768\|Ga0209772_10102868	All Organisms → cellular organisms → Bacteria	879	Open in IMG/M
3300027817\|Ga0209112_10281742	Not Available	585	Open in IMG/M
3300027826\|Ga0209060_10066042	Not Available	1720	Open in IMG/M
3300027855\|Ga0209693_10447486	Not Available	621	Open in IMG/M
3300027867\|Ga0209167_10113573	All Organisms → cellular organisms → Bacteria → Acidobacteria	1397	Open in IMG/M
3300027879\|Ga0209169_10356656	Not Available	769	Open in IMG/M
3300027884\|Ga0209275_10404657	All Organisms → cellular organisms → Bacteria → Acidobacteria	770	Open in IMG/M
3300027895\|Ga0209624_10003296	All Organisms → cellular organisms → Bacteria → Acidobacteria	11473	Open in IMG/M
3300028906\|Ga0308309_10495446	All Organisms → cellular organisms → Bacteria → Acidobacteria	1056	Open in IMG/M
3300029636\|Ga0222749_10477031	Not Available	672	Open in IMG/M
3300030738\|Ga0265462_12491144	Not Available	516	Open in IMG/M
3300030743\|Ga0265461_13966544	Not Available	504	Open in IMG/M
3300030844\|Ga0075377_11405394	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Puniceicoccales → Puniceicoccaceae → Pelagicoccus	933	Open in IMG/M
3300030991\|Ga0073994_11756807	Not Available	665	Open in IMG/M
3300031057\|Ga0170834_106950392	All Organisms → cellular organisms → Bacteria → Acidobacteria	520	Open in IMG/M
3300031231\|Ga0170824_116359199	All Organisms → cellular organisms → Bacteria → Acidobacteria	581	Open in IMG/M
3300031446\|Ga0170820_10181074	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Inquilinus	1074	Open in IMG/M
3300031474\|Ga0170818_109186458	Not Available	940	Open in IMG/M
3300031474\|Ga0170818_113503434	Not Available	1630	Open in IMG/M
3300031708\|Ga0310686_117233012	Not Available	592	Open in IMG/M
3300031715\|Ga0307476_10004664	All Organisms → cellular organisms → Bacteria → Acidobacteria	8243	Open in IMG/M
3300031715\|Ga0307476_10014256	All Organisms → cellular organisms → Bacteria	5044	Open in IMG/M
3300031718\|Ga0307474_10269097	All Organisms → cellular organisms → Bacteria → Acidobacteria	1308	Open in IMG/M
3300031718\|Ga0307474_10809410	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Inquilinus → Inquilinus limosus	741	Open in IMG/M
3300031718\|Ga0307474_10953035	Not Available	679	Open in IMG/M
3300031823\|Ga0307478_10075909	All Organisms → cellular organisms → Bacteria	2553	Open in IMG/M
3300032180\|Ga0307471_100151693	Not Available	2231	Open in IMG/M
3300032893\|Ga0335069_10031188	All Organisms → cellular organisms → Bacteria → Acidobacteria	7217	Open in IMG/M
3300032954\|Ga0335083_10151268	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas → Sphingomonas sp. R-74633	2192	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	97.28%
Host-Associated	Host-Associated	2.72%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	87.76%
Aquatic	Environmental → Aquatic	9.52%
Plants	Host-Associated → Plants	2.04%
Fungi	Host-Associated → Fungi	0.68%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	87.07%
Freshwater	Environmental → Aquatic → Freshwater	6.12%
Thermal Springs	Environmental → Aquatic → Thermal Springs	3.40%
Roots	Host-Associated → Plants → Roots	1.36%
Peat	Environmental → Terrestrial → Peat	0.68%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.68%
Mycelium	Host-Associated → Fungi → Mycelium	0.68%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	57.14%
Loam	Environmental → Terrestrial → Soil → Loam	21.09%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	8.84%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	6.12%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	3.40%
Unclassified	Host-Associated → Plants → Roots → Unclassified	1.36%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.68%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.68%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified	0.68%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	39.46%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	17.69%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	15.65%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	6.80%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	5.44%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.44%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	3.40%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.04%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	1.36%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.68%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.68%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.68%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified	0.68%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	31.29%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	10.88%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	6.80%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	6.12%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	4.76%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	4.76%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.76%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	3.40%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	3.40%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	2.72%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	2.04%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	2.04%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	2.04%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	2.04%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	2.04%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.36%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	1.36%
Plant Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Plant Roots	1.36%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	0.68%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	0.68%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.68%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.68%
Permafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil	0.68%
Prmafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil	0.68%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.68%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	0.68%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.68%
Attine Ant Fungus Gardens	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified → Attine Ant Fungus Gardens	0.68%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004082	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005533	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1	Environmental	Open in IMG/M
3300005534	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1	Environmental	Open in IMG/M
3300005538	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1	Environmental	Open in IMG/M
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005712	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300005950	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 2 DNA2013-047	Environmental	Open in IMG/M
3300005952	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-045	Environmental	Open in IMG/M
3300005995	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-050	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300009665	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_10	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010858	Boreal forest soil eukaryotic communities from Alaska, USA - C3-2 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300010860	Boreal forest soil eukaryotic communities from Alaska, USA - C5-2 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300010866	Boreal forest soil eukaryotic communities from Alaska, USA - C1-3 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300012180	Attine ant fungus gardens microbial communities from Georgia, USA - TSGA058 MetaG	Host-Associated	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300013100	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG	Host-Associated	Open in IMG/M
3300014169	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_10_metaG	Environmental	Open in IMG/M
3300014201	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_10_metaG	Environmental	Open in IMG/M
3300014489	Permafrost microbial communities from Stordalen Mire, Sweden - 812P2M metaG	Environmental	Open in IMG/M
3300014495	Permafrost microbial communities from Stordalen Mire, Sweden - 712P3M metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300015242	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300018060	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MG	Environmental	Open in IMG/M
3300019258	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_10_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300020170	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021086	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021384	Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9	Host-Associated	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300022523	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-17-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022528	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300022715	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022722	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-12-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022724	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-17-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022726	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022873	Peat soil microbial communities from Stordalen Mire, Sweden - 717 P3 10-14	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026214	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 2 DNA2013-047 (SPAdes)	Environmental	Open in IMG/M
3300026281	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-046 (SPAdes)	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027528	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA Ref_O1 (SPAdes)	Environmental	Open in IMG/M
3300027768	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027817	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_O3 (SPAdes)	Environmental	Open in IMG/M
3300027826	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027855	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3 (SPAdes)	Environmental	Open in IMG/M
3300027867	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027879	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4 (SPAdes)	Environmental	Open in IMG/M
3300027884	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)	Environmental	Open in IMG/M
3300027895	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030738	Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada VDE Co-assembly	Environmental	Open in IMG/M
3300030743	Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada VCO Co-assembly	Environmental	Open in IMG/M
3300030844	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA11 EcM (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030991	Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Soil GP-1A (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032893	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1	Environmental	Open in IMG/M
3300032954	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.2	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGIcombinedJ51221_102918292	3300003505	Forest Soil	MDLEHTQPVIKGSDSGLFPAKPEDDQKELAWALLGLVLWSGVVLIGVFGAGYVVGHSLLHLW*
JGIcombinedJ51221_104741411	3300003505	Forest Soil	MDLDDTQTANKGSNPGVFPAKPVDDQKELAWAFLGLILWSGVVLIGVFGAGYVVGHSLLHLW*
Ga0062385_109275932	3300004080	Bog Forest Soil	MDLDDTQTANKGSNPGVFPAKPLDDQKELAWAFLGLILWSGVVLIGVFGAGYVVGHSLLHLW*
Ga0062384_1009703462	3300004082	Bog Forest Soil	MDLDDTQTANKGSNPGVFPARPVDDQKELAWAFLGLILWSGVVLIGVFGAGYVVGHSLLHLW*
Ga0062389_1047944262	3300004092	Bog Forest Soil	MDLDDTRPISKSATPEVFPAKPVDDQKELAWAFLGLILWSGVVLIGVFGAGYVLGHSIF
Ga0070709_100702162	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MDLEATKAAPNEPRKAALSVKPGDDKKELAWAFLGLILWSGVVLIGVFGAGYVLGHSILHIW*
Ga0070709_110318992	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MDLDGTQTTNKDSRMLPIKSGDDQKELAWAFLGLILWSGVVLIGVFGAGYVLGHSIFHLW
Ga0070709_113432941	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MDLEGTQAPLKDSRKSALPAKPGDDQKELAWAFLGLILWSGVVLIGVFGVGYLL
Ga0070714_1004564991	3300005435	Agricultural Soil	MDLEGTQAPLKDSRKSALPAKPGDDQKELAWAFLGLILWSGVVLIGVFGVGYLLGHSIFHIW*
Ga0070710_101194031	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	AAKDIRDGAEPEIPSSAGTVGRVNFMDLEGTQAPLKDSRKSALPAKPGDDQKELAWAFLGLILWSGVVLIGVFGVGYLLGHSIFHIW*
Ga0070734_100984343	3300005533	Surface Soil	MDLEGTKTTLNESRKAAIPVKPGDDKKELAWAFLGLILWSGVVLIGVFGAGYVLGHSILHIW*
Ga0070734_108682262	3300005533	Surface Soil	DVRNGAEPEVGTSAGTVRRVNFMDLEATKTTPNESRKAAIPVKPGDDKKELAWAFLGLILWSGVVLVGVFGAGYVLGHSILHIW*
Ga0070735_101204224	3300005534	Surface Soil	MDLEGTKTTPNESRKAVLPAKSGDDKKELAWAFLGLILWSGVVLVGVFGAGYLLGHSILHIW*
Ga0070731_105292352	3300005538	Surface Soil	MDLEGTKTTLNESRKAALSVKPGDDKKELAWAFLGLILWSGVVLVGVFGAGYVLGHSILHIW*
Ga0070731_107106062	3300005538	Surface Soil	SAGTIRRVNFMDLEGTKTTPSESRKVIPVKPGDDKKELAWAFLGLILWSGVVLVGVFGAGYVLGHSILHIW*
Ga0070733_100527541	3300005541	Surface Soil	MDLEATKTTPNESRKAAIPVKPGDDKKELAWAFLGLILWSGVVLVGVFGA
Ga0070733_103848581	3300005541	Surface Soil	MDLEATKATPNEPRKAAIPGKPGDDKKELAWAFLGLILWSGVVLVGVFGAGYVLGHSILHIW*
Ga0070761_100077774	3300005591	Soil	MDLDDTRPTFKSANPEVLPAKPVDDQKELAWAFLGLILWSGVVLIGVFGAGYVLGHSIFHLW*
Ga0070762_101581662	3300005602	Soil	MDLEGTKTTPNDSRRAASPAKAGDDKKELAWAFLGLILWSGVVLIGVFGAGYVLGHSILHIW*
Ga0070762_102569552	3300005602	Soil	SSNAEAFPAKAVDDQKELAWAFLGLILWSGVVLIGVFGAGYVVGHSIFHLW*
Ga0070762_106332371	3300005602	Soil	MDLEGTKTTLNESRKAAIPVKPGDDKKELAWAFLGLILWSGVVLVGVFGAGYVLGHSILHIW*
Ga0070762_108819941	3300005602	Soil	APEDVRNGAEPEVDSSARTVRRVNFMDLEATKTTPNEPRKAALPVKPGDDKKELAWAFLGLILWSGVVLVGVFGAGYVLGHSILHIW*
Ga0070763_105756142	3300005610	Soil	MDLEGTKTTPNESRRAAIPAKAGDDKKELAWAFLGLILWSGVVLIGVFGAGYVLGHSILHIW*
Ga0070764_102908151	3300005712	Soil	MDLEATKTTPNEPRKAALPVKPGDDKKELAWAFLGLILWSGVVLVGVFGAGYVLGHSILHIW*
Ga0070764_107184731	3300005712	Soil	MDLEGTKTTPNESRRAASPAKAGDDKKELAWAFLGLILWSGVVLIGVFGAGYVLGHSILHIW*
Ga0070766_100314342	3300005921	Soil	MDLDDTQTANKGSNSGVFPAKPVDDQKELAWAFLGLILWSGVVLIGVFGAGYVVGHSLLHLW*
Ga0070766_104126062	3300005921	Soil	MDLEGTKTTPNESRRAVLPAKSGDEKKELAWAFLGLILWSGVVLVGVFGAGYLLGHSILHIW*
Ga0066787_100581153	3300005950	Soil	MDLEDTQQPAAEIANSAVVSPKPGDDQKELAWAFLGLILWSGVVLIGVFGAGYVVGHSIFHLW*
Ga0080026_101279712	3300005952	Permafrost Soil	RRRVTFMDLEDTQQPAAEIANSAVVSPKPGDDQKELAWAFLGLILWSGVVLIGVFGAGYVVGHSIFHLW*
Ga0066790_100646572	3300005995	Soil	DLEDTQQPAAEIANSAVVSPKPGDDQKELAWAFLGLILWSGVVLIGVFGAGYVVGHSIFHLW*
Ga0070717_120852891	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	RNGAEPKAAGTIRRVDFMDLEATKTTPNESRKSGHPAKPGDDKKELAWAFLGLILWSGVVLVGVFGAGYVLGHSILHIW*
Ga0070765_1001774282	3300006176	Soil	MDLDDTRSADKSSNAEAFPAKAVDDQKELAWAFLGLILWSGVVLIGVFGAGYVVGHSIFHLW*
Ga0070765_1004729063	3300006176	Soil	MDLEATKTTPNESRKATLSGKPGDDKKELAWAFLGLILWSGVVLVGVFGAGYVLGHSILHIW*
Ga0073928_1000246524	3300006893	Iron-Sulfur Acid Spring	MDLDDTQTANKGSNPGVFPAKPMDDQKELAWGFLGLILWSGVVLIGVFGAGYVVGHSLLHLW*
Ga0073928_101353762	3300006893	Iron-Sulfur Acid Spring	MDLDRTQPVVKGSDSGLFPAKPEDDQKELAWALLGLLLWSGVVLIGVFGAGYVVGHSLLHLW*
Ga0073928_102920683	3300006893	Iron-Sulfur Acid Spring	MDLDDTRPSTKNEKPEVLPAKPVDDQKELAWAFLGLILWSGVVLIGVFGAGYVVGHSIFHLW*
Ga0116135_10717832	3300009665	Peatland	MDLEDTRPASKTANPDVFPAKPVNDQKELAWAFLGLILWSGVVLIGVFGAGYVLGHSIFHLW*
Ga0126384_106110051	3300010046	Tropical Forest Soil	MDLEATKTTPNESRKAVLPAKSGDDKKELAWAFLGLILWSGVVLVGVFGAGYVLGHSILHIW*
Ga0126376_114431722	3300010359	Tropical Forest Soil	MDLEATKATPNEPRKIANPAKAGDDKKELAWAFLGLILWSGVVLVGVCGAGYVLGHSILHIW*
Ga0126377_125055551	3300010362	Tropical Forest Soil	MDLEGTKTTPNESRKAVLPAKSGDDKKELAWAFLGLILWSGVVLVGVFGAGYVLGHSILHIW*
Ga0126345_10870522	3300010858	Boreal Forest Soil	MDVEETGVAVKSSNPGITPARPADDQKELAWAFFGLILWSGVVLIGVFGVGYVVGHSIFHFW*
Ga0126351_12923512	3300010860	Boreal Forest Soil	MDLDDTQSANKGSNSEVFPAKAVDDQKELAWAFLGLILWSGVVLIGVFGAGYVVGHSIFHLW*
Ga0126344_12269612	3300010866	Boreal Forest Soil	MDLDDTQPDSKGSNVEVFPVKPVDDQRELAWAFLGLILWSGVVLIGVFGAGYLVGHSIFHLW*
Ga0150983_151201132	3300011120	Forest Soil	MDLEGTKTTPNELRKAVLPAKSGDDKKELAWAFLGLILWSGVVLVGVFGAGYLLGHSILHIW*
Ga0150983_163056162	3300011120	Forest Soil	MDLDDTQTTSKGSNPGVFPAKPGDDQKELAWAFLGLILWSGVVLIGVFGAGYVVGHSVLHLW*
Ga0153974_10737532	3300012180	Attine Ant Fungus Gardens	MDLEDTQPVIKGSDSGLFPAKPEDDQKELAWALLGLVLWSGVVLIGVFGAGYVVGHSLLHLW*
Ga0137388_113174662	3300012189	Vadose Zone Soil	MDLDDIQQQPSAEVTNSGILSAKPGDDQKELAWGFLGLILWSGVVLVGVFGAGYVVGHSIFHLW*
Ga0137363_112695222	3300012202	Vadose Zone Soil	MDLDDIQQQPSAEVTNSGILSAKPGDDQKELAWGFLGLILWSGVVLVGVFGAGYV
Ga0137362_108287582	3300012205	Vadose Zone Soil	DLDDIQQQPSAEVTNSGILSAKPGDDQKELAWGFLGLILWSGVVLVGVFGAGYVVGHSIFHLW*
Ga0137358_101211932	3300012582	Vadose Zone Soil	MDLDDTQATSKGPDSGLLTAKPVDDKKELAWAFLGLILWSGVVLIGVFGVGYVLGHSLLHLW*
Ga0137359_107946412	3300012923	Vadose Zone Soil	MDLDDIQQQPSAEVTNSGILSAKPGDDQKELAWGFLGLILWSGVVLVGAFGAGYVVGHSIFHLW*
Ga0137407_101477252	3300012930	Vadose Zone Soil	EANSSYGSGRRVTFMDLDDIQQQPSAEVTNSGILSAKPGDDQKELAWGFLGLILWSGVVLVGVFGAGYVVGHSIFHLW*
Ga0157373_104639151	3300013100	Corn Rhizosphere	MDLEATKAAPNEPRKAALSAKPGDDKKELAWAFLGLILWSGVVLIGVFGAGYVLGHSILHIW*
Ga0181531_101250011	3300014169	Bog	MSKSANPEVFPAKPVDDQKELAWAFLGLILWSGVVLIGVFGVGYVLGHSIFHLW*
Ga0181531_103843332	3300014169	Bog	MDLEGTKTTPNESRKTVLPAKSGDDKKELAWAFLGLILWSGVVLVGVFGAGYVLGHSILHIW*
Ga0181537_100967921	3300014201	Bog	MDLEGTKTTPNESRKTVLPAKSGDDKKELAWAFLGLILWSGVVLVGVFGAGYVL
Ga0182018_100002277	3300014489	Palsa	MDLDDTRPTFKSANPEVFPAKPVDDQKELAWAFLGLILWSGVVLIGVFGAGYVLGHSIFHLW*
Ga0182015_100156364	3300014495	Palsa	MDVDDTQTENSNPIVAPVKPVDDKKELAWAFLGLILWSGVVLIGVFGTGYIVGHSILHLW
Ga0182024_1000195941	3300014501	Permafrost	MDLDDTQPASKGSNVEGFPVKPVDDQRELAWAFLGLILWSGVVLIGVFGAGYLVGHSIFHLW*
Ga0182024_100817443	3300014501	Permafrost	MDLDDTQPVAKSSDPEVFPAKPVDDQKELAWAFLGLILWSGVVLIGVFGAGYVVGHSIFHLW*
Ga0182024_100823934	3300014501	Permafrost	MDLDDTRPTTKNANPEVLPAKPVDDQKELAWAFLGLILWSGVVLIGVFGAGYLVGHSIFHLW*
Ga0137412_100307234	3300015242	Vadose Zone Soil	MDLDDIQQQPSAEVTNSGILSAKPGDDQKELAWGFLGLLLWSGVVLVVVCSAGYVVGHSIFHLW*
Ga0187765_112526951	3300018060	Tropical Peatland	MDLDQAQTSTKASRPPAFPASQGEERKELAWAFLGLLLWSGVVLVGIFGVGYVLGHSLFHLW
Ga0181504_15500192	3300019258	Peatland	ETQSSARPVRRVTFMDLDDTQPMSKSANPEVFPAKPVDDQKELAWAFLGLILWSGVVLIGVFGVGYVLGHSIFHLW
Ga0179594_101941763	3300020170	Vadose Zone Soil	MDLDDIQQQPSAEVTNSGILSAKSGDDQKELAWGFLGLILWSGVVLVGV
Ga0210407_104315273	3300020579	Soil	MDLDDTQTANKGSNPGVFPAKPMDDQKELAWGFLGLILWSGVVLIGVFGAGYVVGHSL
Ga0210407_105625311	3300020579	Soil	KGSNPGIFPAKPMDDQKELAWGFLGLILWSGVVLIGVFGAGYVVGHSLLHLW
Ga0210407_105908932	3300020579	Soil	MDLDDTQPTSKGPDSGLLAAKPVDDKKELAWAFLGLILWSGVVLIGVFGVGYVLGHSLLHLW
Ga0210403_105243051	3300020580	Soil	MDLDDTQTTSKGSNPGVFPAKPGDDQKELAWAFLGLILWSGVVLIGVFGAGYVVGHSVLHLW
Ga0210395_101177272	3300020582	Soil	MDLEGTKTTLNESRKAAIPVKPGDDKKELAWAFLGLILWSGVVLVGVFGAGYVLGHSILHIW
Ga0210395_102294072	3300020582	Soil	MDLDDTRPTFKSANPEVLPAKPVDDQKELAWAFLGLILWSGVVLIGVFGAGYVLGHSIFHLW
Ga0210401_1000288012	3300020583	Soil	MDLDDTQTANKGSNPGVFPAKPVDDQKELAWAFLGLILWSGVVLIGVFGAGYVVGHSLLHLW
Ga0210401_100110838	3300020583	Soil	MDLDDTQTANKSSNPGVFPAKPMDDHKELAWGFLGLILWSGVVLIGVFGAGYVVGHSLLHLW
Ga0210401_113579011	3300020583	Soil	ANKGSNSGVFPAKPVDDQKELAWAFLGLILWSGVVLIGVFGAGYVVGHSLLHLW
Ga0210401_114642802	3300020583	Soil	MDLDDTRSADKSSNAEAFPAKAVDDQKELAWAFLGLILWSGVVLIGVFGAGYVVGHSIFHLW
Ga0179596_103866771	3300021086	Vadose Zone Soil	MDLDDIQQQPSAEVTNSGILSAKPGDDQKELAWGFLGLILWSGVVLVGAFGAGYVVGHSIFHLW
Ga0210404_103107202	3300021088	Soil	MDLDDTQTANKGSNPGIFPAKPMDDQKELAWGFLGLILWSGVVLIGVFGAGYVVGHSLLHLW
Ga0210404_106466562	3300021088	Soil	TKTTPNESRKAVLPAKSGDDKKELAWAFLGLILWSGVVLVGVFGAGYVLGHSILHIW
Ga0210406_110063971	3300021168	Soil	MDLDDTQTANKSSNPGVFPAKPMDDHKELAWGFLGLILWSGVVLIGVFGAG
Ga0210405_104327922	3300021171	Soil	MDLEGTKTTPNESRKAVLPAKSGDDKKELAWAFLGLILWSGVVLVGVFGAGYVLGHSILHIW
Ga0210408_114438611	3300021178	Soil	EPEVGTSAGTIRRVNFMDLEGTKTTLNESRKAAIPVKPGDDKKELAWAFLGLILWSGVVLVGVFGAGYVLGHSILHIW
Ga0210396_115682132	3300021180	Soil	MDLEGTKTTPNESRRAAIPAKAGDDKKELAWAFLGLILWSGVVLIGVFGAGYVLGHSILHIW
Ga0210388_102025283	3300021181	Soil	MDLEGTKTTPNDSRRAASPAKAGDDKKELAWAFLGLILWSGVVLIGVFGAGYVLGHSILHIW
Ga0210388_109507342	3300021181	Soil	MDLDDTQTVNKGSNSGVFPAKPVDDQKELAWAFLGLILWSGVVLIGVFGAGYVVGHSLLHLW
Ga0210388_115165531	3300021181	Soil	NGAEPEVASSAGTIRRVNFMDLEGTKTTPNESRKAVLPAKSGDDKKELAWAFLGLILWSGVVLVGVFGAGYVLGHSILHIW
Ga0210388_117407921	3300021181	Soil	RRVNFMDLEATKATPNEPRKAALPVKPGDDKKELAWAFLGLILWSGVVLVGVFGAGYVLGHSILHIW
Ga0213876_100337192	3300021384	Plant Roots	MDLERTQTTPNELRKAGLSAKPGDDKKELAWAFLGLILWSGVVLVGVFGAGYVLGHSILHIW
Ga0213876_107507171	3300021384	Plant Roots	ELRKAALSAKPGDDKKELAWAFLELILWSGVVLVGVFGAGYVLGHSILHIW
Ga0210393_100678193	3300021401	Soil	MDLDDTQTANKGSNSGVFPAKPVDDQKELAWAFLGLILWSGVVLIGVFGAGYVVGHSLLHLW
Ga0210393_110525401	3300021401	Soil	MDLEAIKATPNEPRKAALSAKPGDDKKELAWAFLGLILWSGVVLVGVFGA
Ga0210385_101532843	3300021402	Soil	MDLEGTKTTPNESRKAVLPAKSGDDKKELAWAFLGLILWSGVVLVGVFGAGYLLGHSILHIW
Ga0210397_114748732	3300021403	Soil	MDLEGTKTTPNESRRAASPAKAGDDKKELAWAFLGLILWSGVVLIGVFGAGYVLGHSILHIW
Ga0210389_107108452	3300021404	Soil	MDLDDTQTANKGSNSGVLPAKPVDDQKELAWAFLGLILWSGVVLIGVFGAGYVVGHSLLHLW
Ga0210389_111550442	3300021404	Soil	MDLEATKTTPKESRKVAIPGRPGDDKKELAWAFLGLILWSGVVLVGVFGAGYVLGHSILHIW
Ga0210387_108486762	3300021405	Soil	MDLDDTQTVNKGSNPGAFPAKPVDDQKELAWAFLGLILWSGVVLIGVFGAGYVVGHSLLHLW
Ga0210386_100672672	3300021406	Soil	MDLEGTKTTPNESRRAAIPAKAGDDKRELAWAFLGLILWSGVVLIGVFGAGYVLGHSILHIW
Ga0210383_111007961	3300021407	Soil	SSTGAIRRVNFMDLEGTKTTPNESRRAAIPAKAGDDKKELAWAFLGLILWSGVVLIGVFGAGYVLGHSILHIW
Ga0210384_101097354	3300021432	Soil	MDLDDTRSVDKSSNAEAFPAKAVDDQKELAWAFLGLILWSGVVLIGVFGAGYVVGHSIFHLW
Ga0210384_101769662	3300021432	Soil	MDLEHTEPVIKGSDSGLFPAKPEDDQKELAWALLGLVLWSGVVLIGVFGAGYVVGHSLLHLW
Ga0210384_113724852	3300021432	Soil	MDVEETAVSVKSSNPGVSPAGPADDQKELAWAFFGLVLWSGVVLIGVFGVGYVVGHSIFHFW
Ga0210390_112954132	3300021474	Soil	MDLDDTQPANKGSNPGVFPAKPMDDQKELAWGFLGLILWSGVVLIGVFGAGYVVGHSLLHLW
Ga0210409_101206732	3300021559	Soil	MDLEHTQPVIKGSDSGLFPAKPEDDQKELAWALLGLVLWSGVVLIGVFGAGYVVGHSLLHLW
Ga0210409_103606402	3300021559	Soil	MDLDDTQTANKGSNPGVFPAKPMDDQKELAWGFLGLILWSGVVLIGVFGAGYVVGHSLLHLW
Ga0242663_11475472	3300022523	Soil	MDLDDTQTTNKGSNPGIFPAKPMDDQKELAWGFLGLILWSGVVLIGVFGAGYVVGHSLLHLW
Ga0242669_10709092	3300022528	Soil	MDLDDTQTANKSSNPGVFPAKPMDDQKELAWGFLGLILWSGVVLIGVFGAGYVVGHSLLHLW
Ga0212123_100025752	3300022557	Iron-Sulfur Acid Spring	MDLDRTQPVVKGSDSGLFPAKPEDDQKELAWALLGLLLWSGVVLIGVFGAGYVVGHSLLHLW
Ga0212123_106371482	3300022557	Iron-Sulfur Acid Spring	MDLDDTRPSTKNEKPEVLPAKPVDDQKELAWAFLGLILWSGVVLIGVFGAGYVVGHSIFHLW
Ga0242678_10704281	3300022715	Soil	RRVTFMDLDDTRPTFKSANPEVLPAKPVDDQKELAWAFLGLILWSGVVLIGVFGAGYVLGHSIFHLW
Ga0242657_12350761	3300022722	Soil	MDLDDTQTVNKGSNPGVFPAKPMDDQKELAWGFLGLILWSGVVLIGVFGAGYVVGHSLLHLW
Ga0242665_101102472	3300022724	Soil	MDLEHTQPVIKGSDSGLFPAKPEDDQKELAWALLGLVLWSGVVLIGVFGAGYVAAHSLLHLW
Ga0242654_101646692	3300022726	Soil	MDVDDTQPTPKGPDSGLFPAKPMDDQKELAWAFLGLILWSGVVLIGVFGAGYVVGHSIFHLW
Ga0224550_10481201	3300022873	Soil	SARPVRRVTFMDLDDTRPTFKSANPEVFPAKPVDDQKELAWAFLGLILWSGVVLIGVFGAGYVLGHSIFHLW
Ga0207692_105179331	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	NFMDLEGTQAPLKDSRKSALPAKPGDDQKELAWAFLGLILWSGVVLIGVFGVGYLLGHSIFHIW
Ga0207699_114385751	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	MDLEATKAAPNEPRKAALSVKPGDDKKELAWAFLGLILWSGVVLIGVFGAGYVLGHSILHIW
Ga0209838_10756452	3300026214	Soil	MDVDDTQTENSNPVVPPVKPVDDKKELAWAFLGLILWSGVVLIGVFGTGYVVGHSILHLW
Ga0209863_100110413	3300026281	Prmafrost Soil	MDLEDTQQPAAEIANSAVVSPKPGDDQKELAWAFLGLILWSGVVLIGVFGAGYVVGHSIFHLW
Ga0179587_102328832	3300026557	Vadose Zone Soil	MDLDDIQQQPSAEVTNSGILSAKPGDDQKELAWGFLGLILWSGVVLVGVFGAGYVVGHSIFHLW
Ga0208985_10125293	3300027528	Forest Soil	MDLDDTRPTAKNENPEALPAKPVDDQKELAWAFLGLILWSGVVLIGVFGAGYVVGHSIFHLW
Ga0209772_101028681	3300027768	Bog Forest Soil	MDLDDTQTADKGSNPGVFPAKPVDDQKELAWAFLGLILWSGVVLIGVFGAGYVVGHSLLHLW
Ga0209112_102817421	3300027817	Forest Soil	MDLEAIKATPNEPRKAALSAKSGDDKKELAWAFLGLILWSGVVLIGVFGAGYVLGHSILHIW
Ga0209060_100660423	3300027826	Surface Soil	MDLEGTKTTLNESRKAAIPVKPGDDKKELAWAFLGLILWSGVVLIGVFGAGYVLGHSILHIW
Ga0209693_104474862	3300027855	Soil	AGTIRRVNFMDLEGTKTTPNESRRAVLPAKSGDEKKELAWAFLGLILWSGVVLVGVFGAGYLLGHSILHIW
Ga0209167_101135732	3300027867	Surface Soil	MDLEATKTTPNESRKAAIPVKPGDDKKELAWAFLGLILWSGVVLVGVFGAGYVLGHSILHIW
Ga0209169_103566561	3300027879	Soil	MDLEATKTTPNEPRKAALPVKPGDDKKELAWAFLGLILWSGVVLVGVFGAGYVLGHSILHIW
Ga0209275_104046571	3300027884	Soil	SSNAEAFPAKAVDDQKELAWAFLGLILWSGVVLIGVFGAGYVVGHSIFHLW
Ga0209624_100032965	3300027895	Forest Soil	MDLEGTKTTPNESRRAVLPAKSGDEKKELAWAFLGLILWSGVVLVGVFGAGYLLGHSILHIW
Ga0308309_104954462	3300028906	Soil	MDLEATKTTPNESRKATLSGKPGDDKKELAWAFLGLILWSGVVLVGVFGAGYVLGHSILHIW
Ga0222749_104770311	3300029636	Soil	MDLDDTRSADKSSNVEAFPAKAVDDQKELAWAFLGLILWSGVVLIGVFGAGYVVGHSIFHLW
Ga0265462_124911442	3300030738	Soil	MDLDDTRPTTKNDNPEVLPAKPVDDQKELAWAFLGLILWSGVVLIGVFGAGYVVGHSIFHLW
Ga0265461_139665441	3300030743	Soil	MDLEDTRPDAKSSTPGVLRTKAVDDQKELAWAFLGLVLWSGVVLIGLFGAGYLVGHSILHLW
Ga0075377_114053942	3300030844	Soil	MDLEATKTTPNESRKVALPGKPGDDKKELAWAFLGLILWSGVVLVGVFGAGYVLGHSILHIW
Ga0073994_117568071	3300030991	Soil	MDVEETGVSVKSSNPGVSPARPADDQKELAWAFFGLVLWSGVVLIGVFGVGYVVGHSIFHFW
Ga0170834_1069503922	3300031057	Forest Soil	GPDSGLLPAKPVDDHKELAWAFLGLILWSGVVLIGVFGVGYVLGHSLLHLW
Ga0170824_1163591991	3300031231	Forest Soil	PGSIRRVTFMDLDDTQLSSKGPDSGLLPAKPVDDHKELAWAFLGLILWSGVVLIGVFGVGYVLGHSLLHLW
Ga0170820_101810741	3300031446	Forest Soil	MDLEATKTTPNEPRKAALPVKPGDDKKELAWAFLGLILWSGVVLVGVFGAGYVLG
Ga0170818_1091864581	3300031474	Forest Soil	MDVEATKTTPSEPRKIAIPAKPGDDKKELAWAFLGLILWSGVVLVGVFGAGYVLGHSILHIW
Ga0170818_1135034341	3300031474	Forest Soil	MDLEATKTTPNEPRKAALPVKPGDDKKELAWAFLGLILWSGVVLVGVFGAGY
Ga0310686_1172330122	3300031708	Soil	MDLDDTRPTTKNENPEALPAKPVDDQKELAWAFLGLILWSGVVLIGVFGAGYVVGHSIFHLW
Ga0307476_100046649	3300031715	Hardwood Forest Soil	MDLDDTQTVNKGSNPGVFPAKPMDDHKELAWGFLGLILWSGVVLIGVFGAGYVVGHSLLHLW
Ga0307476_100142564	3300031715	Hardwood Forest Soil	MDLEGTKTTPNESRRAAIPAKPGDDKKELAWAFLGLILWSGVVLIGVFGAGYVLGHSILHIW
Ga0307474_102690972	3300031718	Hardwood Forest Soil	MDLDGTQTANKGSNPGVFPAKPVDDQKELAWAFLGLILWSGVVLIGVFGAGYVVGHSLLHLW
Ga0307474_108094101	3300031718	Hardwood Forest Soil	MDLEGTKTTPNESRRAAIPAKPGDDKKELAWAFLGLILWSGVVLIGVFGAGYV
Ga0307474_109530351	3300031718	Hardwood Forest Soil	EPEVASSAGAIRRVNFMDLEGTKATLSESRKTALPVKPGDDKKELAWAFLGLILWSGVVLVGVFGAGYVLGHSILHIW
Ga0307478_100759092	3300031823	Hardwood Forest Soil	MDLDDTQTANKGSNPGVFPAKPMDDHKELAWGFLGLILWSGVVLIGVFGAGYVVGHSLLHLW
Ga0307471_1001516933	3300032180	Hardwood Forest Soil	MDLDDTQLTSKGPDSGLLPAKPVDDKKELAWAFLGLILWSGVVLIGVFGVGYVLGHSLLHLW
Ga0335069_100311885	3300032893	Soil	MDLEGTKTTLNESRKAALSVKPGDDKKELAWAFLGLILWSGVVLVGVFGAGYVLGHSILHIW
Ga0335083_101512682	3300032954	Soil	MDLEGTKTTLNESRKAALAVKPGDDKKELAWAFLGLILWSGVVLVGVFGAGYVLGHSILHIW

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F049121

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences