Metagenome Family F049170

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F049170
Family Type	Metagenome
Number of Sequences	147
Average Sequence Length	73 residues
Representative Sequence	VQVAIVIDIAFIVAVFLFVSLVRPDLHIEGGQSLLEFRDPLTLMPKTENADDNREGSQSQCVPYQEARGGTD
Number of Associated Samples	110
Number of Associated Scaffolds	147

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	78.08 %
% of genes near scaffold ends (potentially truncated)	31.97 %
% of genes from short scaffolds (< 2000 bps)	78.91 %
Associated GOLD sequencing projects	102
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (50.340 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil (21.088 % of family members)
Environment Ontology (ENVO)	Unclassified (38.776 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (56.463 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 20.83% β-sheet: 13.89% Coil/Unstructured: 65.28%
Feature Viewer

Powered by Feature Viewer

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 147 Family Scaffolds
PF03401	TctC	12.24
PF04392	ABC_sub_bind	2.04
PF00561	Abhydrolase_1	2.04
PF13531	SBP_bac_11	2.04
PF07311	Dodecin	2.04
PF04299	FMN_bind_2	1.36
PF01575	MaoC_dehydratas	1.36
PF04226	Transgly_assoc	1.36
PF07045	DUF1330	1.36
PF13649	Methyltransf_25	1.36
PF00884	Sulfatase	1.36
PF14707	Sulfatase_C	1.36
PF02163	Peptidase_M50	0.68
PF09084	NMT1	0.68
PF16868	NMT1_3	0.68
PF03992	ABM	0.68
PF00589	Phage_integrase	0.68
PF07536	HWE_HK	0.68
PF01590	GAF	0.68
PF12849	PBP_like_2	0.68
PF00210	Ferritin	0.68
PF12697	Abhydrolase_6	0.68
PF03466	LysR_substrate	0.68
PF13185	GAF_2	0.68
PF05853	BKACE	0.68
PF14378	PAP2_3	0.68
PF07885	Ion_trans_2	0.68

COG ID	Name	Functional Category	% Frequency in 147 Family Scaffolds
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	12.24
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	2.04
COG3360	Flavin-binding protein dodecin	General function prediction only [R]	2.04
COG2261	Uncharacterized membrane protein YeaQ/YmgE, transglycosylase-associated protein family	General function prediction only [R]	1.36
COG5470	Uncharacterized conserved protein, DUF1330 family	Function unknown [S]	1.36
COG0715	ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component	Inorganic ion transport and metabolism [P]	0.68
COG3246	Uncharacterized conserved protein, DUF849 family	Function unknown [S]	0.68
COG3920	Two-component sensor histidine kinase, HisKA and HATPase domains	Signal transduction mechanisms [T]	0.68
COG4251	Bacteriophytochrome (light-regulated signal transduction histidine kinase)	Signal transduction mechanisms [T]	0.68
COG4521	ABC-type taurine transport system, periplasmic component	Inorganic ion transport and metabolism [P]	0.68

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	50.34 %
Unclassified	root	N/A	49.66 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	50.34 %
Unclassified	root	N/A	49.66 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	50.34 %
Unclassified	root	N/A	49.66 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.66 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	41.50 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.66 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	24.49 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.66 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	13.61 %
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	0.68 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.66 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	6.80 %
Xanthobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae	0.68 %
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	0.68 %
Rhodobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.66 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	4.08 %
Pseudolabrys	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys	0.68 %
Curvibacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Curvibacter	0.68 %
unclassified Bradyrhizobiaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → unclassified Bradyrhizobiaceae	0.68 %
Paracoccus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Paracoccus	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.66 %
Bradyrhizobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → unclassified Bradyrhizobiaceae → Bradyrhizobiaceae bacterium	0.68 %
Bradyrhizobium lablabi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	0.68 %
unclassified Pseudolabrys	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys	0.68 %
Paracoccus denitrificans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Paracoccus → Paracoccus denitrificans	0.68 %
unclassified Curvibacter	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Curvibacter → unclassified Curvibacter	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.66 %
Curvibacter sp. PAE-UM	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Curvibacter → unclassified Curvibacter → Curvibacter sp. PAE-UM	0.68 %
Pseudolabrys sp. FHR47	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. FHR47	0.68 %
Paracoccus denitrificans PD1222	strain	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Paracoccus → Paracoccus denitrificans → Paracoccus denitrificans PD1222	0.68 %
Bradyrhizobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → unclassified Bradyrhizobiaceae → Bradyrhizobiaceae bacterium	0.68 %
Bradyrhizobium lablabi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	0.68 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2088090015\|GPICI_8996699	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2496	Open in IMG/M
2228664022\|INPgaii200_c1105930	Not Available	1073	Open in IMG/M
2228664022\|INPgaii200_c1106000	Not Available	717	Open in IMG/M
3300000156\|NODE_c0604532	All Organisms → cellular organisms → Bacteria	1654	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_101751040	Not Available	6073	Open in IMG/M
3300000580\|AF_2010_repII_A01DRAFT_1000067	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	11550	Open in IMG/M
3300000597\|AF_2010_repII_A1DRAFT_10074105	Not Available	859	Open in IMG/M
3300000655\|AF_2010_repII_A100DRAFT_1022793	Not Available	1175	Open in IMG/M
3300000787\|JGI11643J11755_10453362	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	517	Open in IMG/M
3300000816\|AF_2010_repII_A10DRAFT_1004406	Not Available	1452	Open in IMG/M
3300000816\|AF_2010_repII_A10DRAFT_1006504	Not Available	1215	Open in IMG/M
3300000816\|AF_2010_repII_A10DRAFT_1012776	Not Available	882	Open in IMG/M
3300004633\|Ga0066395_10060338	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1712	Open in IMG/M
3300004633\|Ga0066395_10205377	All Organisms → cellular organisms → Bacteria → Proteobacteria	1033	Open in IMG/M
3300004633\|Ga0066395_10457710	Not Available	728	Open in IMG/M
3300005093\|Ga0062594_102548667	Not Available	563	Open in IMG/M
3300005160\|Ga0066820_1001331	Not Available	1067	Open in IMG/M
3300005294\|Ga0065705_10497523	Not Available	781	Open in IMG/M
3300005332\|Ga0066388_100066500	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3876	Open in IMG/M
3300005332\|Ga0066388_100170057	All Organisms → cellular organisms → Bacteria	2778	Open in IMG/M
3300005332\|Ga0066388_100529096	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1811	Open in IMG/M
3300005332\|Ga0066388_101728390	Not Available	1108	Open in IMG/M
3300005332\|Ga0066388_101912591	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. FHR47	1060	Open in IMG/M
3300005332\|Ga0066388_103708553	Not Available	780	Open in IMG/M
3300005334\|Ga0068869_100529002	All Organisms → cellular organisms → Bacteria → Proteobacteria	988	Open in IMG/M
3300005337\|Ga0070682_100023262	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3678	Open in IMG/M
3300005339\|Ga0070660_101329714	Not Available	610	Open in IMG/M
3300005367\|Ga0070667_100054651	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3372	Open in IMG/M
3300005439\|Ga0070711_100878498	Not Available	764	Open in IMG/M
3300005441\|Ga0070700_100735211	Not Available	788	Open in IMG/M
3300005713\|Ga0066905_100005733	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	5312	Open in IMG/M
3300005713\|Ga0066905_100830915	Not Available	803	Open in IMG/M
3300005713\|Ga0066905_102017953	Not Available	535	Open in IMG/M
3300005718\|Ga0068866_10238696	All Organisms → cellular organisms → Bacteria → Proteobacteria	1106	Open in IMG/M
3300005764\|Ga0066903_100310714	Not Available	2506	Open in IMG/M
3300005764\|Ga0066903_100370639	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2332	Open in IMG/M
3300005764\|Ga0066903_100838624	Not Available	1652	Open in IMG/M
3300005764\|Ga0066903_105785846	All Organisms → cellular organisms → Bacteria → Proteobacteria	649	Open in IMG/M
3300005840\|Ga0068870_10285626	All Organisms → cellular organisms → Bacteria → Proteobacteria	1036	Open in IMG/M
3300006047\|Ga0075024_100195685	All Organisms → cellular organisms → Bacteria	945	Open in IMG/M
3300006057\|Ga0075026_100086599	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1535	Open in IMG/M
3300006173\|Ga0070716_100925410	Not Available	684	Open in IMG/M
3300006755\|Ga0079222_11967367	Not Available	573	Open in IMG/M
3300006806\|Ga0079220_11944825	Not Available	523	Open in IMG/M
3300006852\|Ga0075433_10339174	All Organisms → cellular organisms → Bacteria	1328	Open in IMG/M
3300006854\|Ga0075425_100122853	All Organisms → cellular organisms → Bacteria	2963	Open in IMG/M
3300006904\|Ga0075424_101402907	Not Available	742	Open in IMG/M
3300006904\|Ga0075424_101527729	All Organisms → cellular organisms → Bacteria → Proteobacteria	708	Open in IMG/M
3300006914\|Ga0075436_100690655	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	756	Open in IMG/M
3300006954\|Ga0079219_11094054	Not Available	675	Open in IMG/M
3300009094\|Ga0111539_11363054	Not Available	823	Open in IMG/M
3300009094\|Ga0111539_13259453	Not Available	523	Open in IMG/M
3300009098\|Ga0105245_11165686	Not Available	818	Open in IMG/M
3300009147\|Ga0114129_11159708	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Paracoccus → Paracoccus denitrificans → Paracoccus denitrificans PD1222	964	Open in IMG/M
3300009553\|Ga0105249_12117854	Not Available	635	Open in IMG/M
3300009792\|Ga0126374_11813173	Not Available	510	Open in IMG/M
3300010043\|Ga0126380_10014599	All Organisms → cellular organisms → Bacteria	3625	Open in IMG/M
3300010043\|Ga0126380_10033375	All Organisms → cellular organisms → Bacteria → Proteobacteria	2625	Open in IMG/M
3300010043\|Ga0126380_10193451	All Organisms → cellular organisms → Bacteria → Proteobacteria	1354	Open in IMG/M
3300010043\|Ga0126380_10295026	All Organisms → cellular organisms → Bacteria	1150	Open in IMG/M
3300010043\|Ga0126380_12003430	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → unclassified Bradyrhizobiaceae → Bradyrhizobiaceae bacterium	530	Open in IMG/M
3300010046\|Ga0126384_10261328	Not Available	1405	Open in IMG/M
3300010046\|Ga0126384_10695903	All Organisms → cellular organisms → Bacteria → Proteobacteria	900	Open in IMG/M
3300010046\|Ga0126384_11070410	Not Available	738	Open in IMG/M
3300010047\|Ga0126382_10001034	All Organisms → cellular organisms → Bacteria	11250	Open in IMG/M
3300010047\|Ga0126382_10141790	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1631	Open in IMG/M
3300010359\|Ga0126376_10135689	All Organisms → cellular organisms → Bacteria → Proteobacteria	1946	Open in IMG/M
3300010359\|Ga0126376_10177517	All Organisms → cellular organisms → Bacteria → Proteobacteria	1739	Open in IMG/M
3300010359\|Ga0126376_10186058	Not Available	1706	Open in IMG/M
3300010360\|Ga0126372_10094998	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	2221	Open in IMG/M
3300010361\|Ga0126378_10295827	All Organisms → cellular organisms → Bacteria	1721	Open in IMG/M
3300010362\|Ga0126377_10068919	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3141	Open in IMG/M
3300010366\|Ga0126379_10219659	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1845	Open in IMG/M
3300010366\|Ga0126379_11190270	Not Available	868	Open in IMG/M
3300010366\|Ga0126379_12572988	Not Available	607	Open in IMG/M
3300010376\|Ga0126381_102054970	Not Available	823	Open in IMG/M
3300010376\|Ga0126381_102866127	Not Available	687	Open in IMG/M
3300010398\|Ga0126383_11623504	Not Available	736	Open in IMG/M
3300010400\|Ga0134122_10149825	All Organisms → cellular organisms → Bacteria → Proteobacteria	1896	Open in IMG/M
3300010403\|Ga0134123_10192477	All Organisms → cellular organisms → Bacteria → Proteobacteria	1728	Open in IMG/M
3300010868\|Ga0124844_1014268	Not Available	2101	Open in IMG/M
3300012476\|Ga0157344_1018468	Not Available	581	Open in IMG/M
3300012480\|Ga0157346_1010295	All Organisms → cellular organisms → Bacteria → Proteobacteria	676	Open in IMG/M
3300012492\|Ga0157335_1025135	Not Available	592	Open in IMG/M
3300012948\|Ga0126375_10767736	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	759	Open in IMG/M
3300012948\|Ga0126375_11523151	Not Available	572	Open in IMG/M
3300012951\|Ga0164300_10122079	All Organisms → cellular organisms → Bacteria → Proteobacteria	1179	Open in IMG/M
3300012955\|Ga0164298_10695924	Not Available	712	Open in IMG/M
3300012957\|Ga0164303_10146514	Not Available	1244	Open in IMG/M
3300012971\|Ga0126369_10462204	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1320	Open in IMG/M
3300012984\|Ga0164309_10294333	Not Available	1167	Open in IMG/M
3300013297\|Ga0157378_12893317	Not Available	532	Open in IMG/M
3300013306\|Ga0163162_10272954	All Organisms → cellular organisms → Bacteria	1823	Open in IMG/M
3300013307\|Ga0157372_12776021	Not Available	562	Open in IMG/M
3300014497\|Ga0182008_10235699	All Organisms → cellular organisms → Bacteria → Proteobacteria	940	Open in IMG/M
3300015371\|Ga0132258_10413878	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3352	Open in IMG/M
3300015372\|Ga0132256_100725212	All Organisms → cellular organisms → Bacteria → Proteobacteria	1110	Open in IMG/M
3300016357\|Ga0182032_10001498	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	10479	Open in IMG/M
3300016357\|Ga0182032_11014709	Not Available	709	Open in IMG/M
3300016387\|Ga0182040_10000709	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	15133	Open in IMG/M
3300016445\|Ga0182038_10022208	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3842	Open in IMG/M
3300017947\|Ga0187785_10004518	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4570	Open in IMG/M
3300018060\|Ga0187765_10024529	All Organisms → cellular organisms → Bacteria	2910	Open in IMG/M
3300018067\|Ga0184611_1040363	Not Available	1528	Open in IMG/M
3300018072\|Ga0184635_10257070	Not Available	690	Open in IMG/M
3300018073\|Ga0184624_10292490	Not Available	730	Open in IMG/M
3300019879\|Ga0193723_1066472	Not Available	1044	Open in IMG/M
3300021560\|Ga0126371_10719203	Not Available	1146	Open in IMG/M
3300021560\|Ga0126371_11578466	Not Available	783	Open in IMG/M
3300021560\|Ga0126371_11694401	All Organisms → cellular organisms → Bacteria	756	Open in IMG/M
3300021560\|Ga0126371_12166936	All Organisms → cellular organisms → Bacteria → Proteobacteria	670	Open in IMG/M
3300021560\|Ga0126371_13313757	Not Available	544	Open in IMG/M
3300025899\|Ga0207642_10246520	All Organisms → cellular organisms → Bacteria → Proteobacteria	1011	Open in IMG/M
3300025900\|Ga0207710_10221190	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	940	Open in IMG/M
3300025918\|Ga0207662_10167290	All Organisms → cellular organisms → Bacteria → Proteobacteria	1408	Open in IMG/M
3300025919\|Ga0207657_10257991	All Organisms → cellular organisms → Bacteria → Proteobacteria	1388	Open in IMG/M
3300025972\|Ga0207668_10560321	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	991	Open in IMG/M
3300026023\|Ga0207677_10612831	Not Available	956	Open in IMG/M
3300026067\|Ga0207678_10967739	All Organisms → cellular organisms → Bacteria → Proteobacteria	753	Open in IMG/M
3300027523\|Ga0208890_1034747	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	769	Open in IMG/M
3300027874\|Ga0209465_10112280	All Organisms → cellular organisms → Bacteria	1341	Open in IMG/M
3300027874\|Ga0209465_10667433	Not Available	511	Open in IMG/M
3300027880\|Ga0209481_10337639	Not Available	768	Open in IMG/M
3300027915\|Ga0209069_10504093	Not Available	682	Open in IMG/M
3300028381\|Ga0268264_10033033	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	4247	Open in IMG/M
3300028807\|Ga0307305_10460225	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	572	Open in IMG/M
3300028828\|Ga0307312_10545640	Not Available	766	Open in IMG/M
3300031170\|Ga0307498_10000320	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	6067	Open in IMG/M
3300031545\|Ga0318541_10002000	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	7833	Open in IMG/M
3300031545\|Ga0318541_10004670	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	5670	Open in IMG/M
3300031681\|Ga0318572_10828478	Not Available	550	Open in IMG/M
3300031682\|Ga0318560_10302409	Not Available	862	Open in IMG/M
3300031736\|Ga0318501_10645172	Not Available	582	Open in IMG/M
3300031751\|Ga0318494_10605425	Not Available	641	Open in IMG/M
3300031893\|Ga0318536_10204926	Not Available	1004	Open in IMG/M
3300031896\|Ga0318551_10938123	Not Available	506	Open in IMG/M
3300031910\|Ga0306923_10022852	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	6646	Open in IMG/M
3300031942\|Ga0310916_11057005	Not Available	676	Open in IMG/M
3300031944\|Ga0310884_10575686	All Organisms → cellular organisms → Bacteria → Proteobacteria	670	Open in IMG/M
3300031945\|Ga0310913_10004556	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	7803	Open in IMG/M
3300031959\|Ga0318530_10265592	Not Available	708	Open in IMG/M
3300032000\|Ga0310903_10107706	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Curvibacter → unclassified Curvibacter → Curvibacter sp. PAE-UM	1196	Open in IMG/M
3300032012\|Ga0310902_10731237	Not Available	669	Open in IMG/M
3300032180\|Ga0307471_102493958	Not Available	654	Open in IMG/M
3300032261\|Ga0306920_102121360	Not Available	784	Open in IMG/M
3300033289\|Ga0310914_10072912	All Organisms → cellular organisms → Bacteria → Proteobacteria	2893	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	76.87%
Host-Associated	Host-Associated	22.45%
Engineered	Engineered	0.68%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	72.79%
Plants	Host-Associated → Plants	22.45%
Aquatic	Environmental → Aquatic	4.08%
Solid Waste	Engineered → Solid Waste	0.68%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	72.79%
Rhizosphere	Host-Associated → Plants → Rhizosphere	14.29%
Rhizoplane	Host-Associated → Plants → Rhizoplane	8.16%
Sediment	Environmental → Aquatic → Sediment	4.08%
Grass	Engineered → Solid Waste → Grass	0.68%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	55.10%
Loam	Environmental → Terrestrial → Soil → Loam	16.33%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	10.20%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	7.48%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	4.08%
Soil	Host-Associated → Plants → Rhizosphere → Soil	4.08%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.36%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.68%
Composting	Engineered → Solid Waste → Grass → Composting	0.68%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	29.93%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	17.01%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	12.93%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	10.20%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	7.48%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	4.08%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	4.08%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.40%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.40%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.72%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	2.04%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.36%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.68%
Bioreactor	Engineered → Solid Waste → Grass → Composting → Bioreactor	0.68%

Habitat	Taxonomy	Distribution
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	21.09%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	12.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	8.16%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	6.12%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	5.44%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	4.08%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	4.08%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.40%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	3.40%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	2.04%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	2.04%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	2.04%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	2.04%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.04%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	2.04%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	2.04%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.36%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.36%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.36%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.36%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.36%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.36%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.68%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.68%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.68%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.68%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.68%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.68%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.68%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.68%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.68%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.68%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.68%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.68%
Sugar Cane Bagasse Incubating Bioreactor	Engineered → Solid Waste → Grass → Composting → Bioreactor → Sugar Cane Bagasse Incubating Bioreactor	0.68%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2088090015	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
2228664022	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000156	Sugar cane bagasse incubating bioreactor microbial communities from Sao Carlos, Brazil, that are aerobic and semianaerobic	Engineered	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000580	Forest soil microbial communities from Amazon forest - 2010 replicate II A01	Environmental	Open in IMG/M
3300000597	Forest soil microbial communities from Amazon forest - 2010 replicate II A1	Environmental	Open in IMG/M
3300000655	Forest soil microbial communities from Amazon forest - 2010 replicate II A100	Environmental	Open in IMG/M
3300000787	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000816	Forest soil microbial communities from Amazon forest - 2010 replicate II A10	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005160	Soil and rhizosphere microbial communities from Laval, Canada - mgLMB	Environmental	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005339	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG	Host-Associated	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005718	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005840	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2	Host-Associated	Open in IMG/M
3300006047	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013	Environmental	Open in IMG/M
3300006057	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2012	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300010868	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (PacBio error correction)	Environmental	Open in IMG/M
3300012476	Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.6.yng.070610	Host-Associated	Open in IMG/M
3300012480	Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.5.yng.040610	Host-Associated	Open in IMG/M
3300012492	Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.2.yng.030610	Host-Associated	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300014497	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017947	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_4_20_MG	Environmental	Open in IMG/M
3300018060	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MG	Environmental	Open in IMG/M
3300018067	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_coex	Environmental	Open in IMG/M
3300018072	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b2	Environmental	Open in IMG/M
3300018073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_b1	Environmental	Open in IMG/M
3300019879	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2m2	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025900	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025918	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025919	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026067	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300027523	Soil and rhizosphere microbial communities from Laval, Canada - mgHPA (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027880	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 (SPAdes)	Host-Associated	Open in IMG/M
3300027915	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013 (SPAdes)	Environmental	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028807	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_186	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300031170	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 12_S	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031944	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D1	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031959	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f24	Environmental	Open in IMG/M
3300032000	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D3	Environmental	Open in IMG/M
3300032012	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D3	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GPICI_00912540	2088090015	Soil	VQVAIVIDIVFIVVVFLFLSLVRPDLHIEGGRSLLEFRDPLSLGPKTENVSADENREASQRQCVPHQEARGGTD
INPgaii200_11059302	2228664022	Soil	MAIVIDIAFVVVVFLFLSLVRPDLHIESGQSLLEFRDPLTLRPKTENVSADENREASQRQCVPHQEARGGTD
INPgaii200_11060004	2228664022	Soil	VQVAIVIDIVFIVVVFLFLSLVRPDLHIEGGRSLLEFRDPLSLGPKTENVSADENREASQRQCVPHQEARGGT
NODE_06045323	3300000156	Sugar Cane Bagasse Incubating Bioreactor	MAKAKSDKKSERSVQVAIVIDISFMIAVFLFVSLVRPDLHLEAGQSLLEFRDPLTLMPKIENVSADENRETGQWQYAPGQETRGGTD*
INPhiseqgaiiFebDRAFT_1017510408	3300000364	Soil	VQAAIVIDIAFVGAIFLFVSLVRPDIHIESGRSLLEFRDPLSLRPRTENVGADENREAIQWQCVPHQEERGGTD*
AF_2010_repII_A01DRAFT_100006710	3300000580	Forest Soil	MAIVIDIAFIVAVFLFVSLVRPDLHIEGGQSLLEFRDPLTLMPKTESADDNREGGQSQCVPHQEARGGTD*
AF_2010_repII_A1DRAFT_100741053	3300000597	Forest Soil	VQVAIVIDIAFIVAVFLFVSLARPDLHIEGGQSLLEFRDPLTLMPKTESADDNREGSQWQCVPHQ
AF_2010_repII_A100DRAFT_10227934	3300000655	Forest Soil	VQVAIVIDIAFIVAVFLFVSLARPDLHIEGGQSLLEFRDPLTLMPKTESADDNREGSQWQCVPHQEARGGTD*
JGI11643J11755_104533621	3300000787	Soil	AVFLFVSLVRPDLHIEGGRSLLEFRDPLSLMPRTENLGADENLEASRRQCVPLQVERGGTD*
AF_2010_repII_A10DRAFT_10044062	3300000816	Forest Soil	VQAAIVIDIAFVVAIFLFVSLVRPDIHIESGRSQLEFRDPLSLRPKTENVGADENREAIQWQCVPHQEERGGTD*
AF_2010_repII_A10DRAFT_10065042	3300000816	Forest Soil	VQAAIVIDIAFVVAVFLFVSLIRPDIHIEGGRSLLEFRDPLSLAPKTENVSADENREASLWQCVPHQEARGGTD*
AF_2010_repII_A10DRAFT_10127762	3300000816	Forest Soil	VQVAIVIDIAFIVAVFLFVSLVRPDLHIEGGQSLLEFRDPLTLMPKIENVDDNREGSQSQCVSYQEARGGTD*
Ga0066395_100603381	3300004633	Tropical Forest Soil	EAPVQMAIVIDIAFIVVVFLFLSLVRPDLHIESGQSLLEFRDPLTLRPKTENVSADENWETSQRQCIPHQEMRGGTD*
Ga0066395_102053771	3300004633	Tropical Forest Soil	VFLFVSLVRPDLHIEGGQSLLEFRDPLTLMPKTESADDNREGGQSQCVPHQEARGGTD*
Ga0066395_104577102	3300004633	Tropical Forest Soil	VQVAIVIDIAFIVAVFLFVSLVRPDLHIEGGQSLLEFRDPLTLMPKTESADDNREGSQWQCVPHQEARGGTD*
Ga0062594_1025486671	3300005093	Soil	VQVAAIIDVAFIVAVFLFVSLVRPDLHIEGGRSLLEFRDPLSLMPRTENLGADENLESSQRQCAPLQVERGGTD*
Ga0066820_10013311	3300005160	Soil	VQVAVIVDVAFVVAVFLFVSLVRPDLHIEGGRSLLEFRDPLSLMPRTENLGADENLEASQRQCVPLQVERGGTD*
Ga0065705_104975232	3300005294	Switchgrass Rhizosphere	VQVAIVIDIVFIVVVFLFLSLVRPDLHIEGGRSLLEFRDPLSLGPKTENVSADENREASQRQCVPHQEARGGTD*
Ga0066388_1000665004	3300005332	Tropical Forest Soil	VQAAIVIDIAFIVAIFLFVSLARPDIHIESGRSLLEFRDPLSLRPKTENVGADENREAIQWQCVPHQEERGGTD*
Ga0066388_1001700575	3300005332	Tropical Forest Soil	MAKAKSDKKSERSVQVAIVIDISFMIAVFLFVSLVRPDLHIEAGQSLLEFRDPLTLMPKIENVSADENRETGQWQYAPGQETRGGTD*
Ga0066388_1005290965	3300005332	Tropical Forest Soil	VQVAIVIDIAFIVAVFLFVSLARPDLHIEGGQSLLEFRDPLTLMPKTESADDNREGSQWQ
Ga0066388_1017283905	3300005332	Tropical Forest Soil	VQVAIAVDIAFVVAVFLFVSLVRPDLHIEGGQSLLEFRDPLTLMPKTESADDNREGSQWQ
Ga0066388_1019125913	3300005332	Tropical Forest Soil	VQAAAIIDIAFVVAVFLFVSLVRPDLHIEGGRSLLEFRDPLSLMPRTENIGVDENLEASRQQCVPLAVDRGDTD*
Ga0066388_1037085531	3300005332	Tropical Forest Soil	VQAAAIIDVVFVVAVFLFVSLVRPDLHLEGGRSLLEFRDPLSLMPRTETPGADENPDAGQRQCVPQVERGGTD*
Ga0068869_1005290021	3300005334	Miscanthus Rhizosphere	VQVAAIIDVAFIVAVFLFVSLVRPDLHIEGGRSLLEFRDPLSLMPRMENLGTDENLETSQRQCVPLQVERGGTD*
Ga0070682_1000232621	3300005337	Corn Rhizosphere	VQVAVIIDVAFVVAVFLFVSLVRPDLHIEGGRSLLEFRDPLSLMPRTENLGADENLEASQRQCVPLQVERGGTD*
Ga0070660_1013297141	3300005339	Corn Rhizosphere	VQVAAIIDVAFIVAVFLFVSLVRPDLHIEGGRSLLEFRDPLSLMPRTENLGADENLESSQRQCVPLQVERGGTD*
Ga0070667_1000546514	3300005367	Switchgrass Rhizosphere	VQVAVIVDVAFIVAVFLFVSLVRPDLHIEGGRSLLEFRDPLSLMPRMENLGTDENLETSQRQCVPLQVERGGTD*
Ga0070711_1008784982	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	VQAAIVIDIAFVVAIFLFVSLVRPDIHIESGRSLLEFRDPLSLRPKTENVGADENREAIQWQCVPHQEERGGTD*
Ga0070700_1007352111	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	VQVAVIVDVAFVVAVFLFVSLVRPDLHIEGGRSLLEFRDPLSLMPRMENLGTDENLETSQRQCVPLQVERGGTD*
Ga0066905_1000057335	3300005713	Tropical Forest Soil	VQVAIVIDIAFIVVVFLFLSLVRPDLHIEGGRSLLEFRDPLSLRPKTENVSADENPEASQRQCVPYQEVGGTD*
Ga0066905_1008309152	3300005713	Tropical Forest Soil	MAIVIDIAFIVAVFLFVSLVRPDLHIEGGQSLLEFRDPLTLMPKTESADDNREGSQSQCVPHQEARGGTD*
Ga0066905_1020179531	3300005713	Tropical Forest Soil	VQVAIVIDIAFIVVVFLSLSLVRPDLHIEGGRSLLEFRDPLTLRPKTENVSADENREASQPQCVPHQEAGGGTD*
Ga0068866_102386962	3300005718	Miscanthus Rhizosphere	VIVDVAFVVAVFLFVSLVRPDLHIEGGRSLLEFRDPLSLMPRMENLGTDENLETSQRQCVPLQVERGGTD*
Ga0066903_1003107146	3300005764	Tropical Forest Soil	MFRPEVIVQAAIVIDIAFVVAIFLFVSLARPDIHIESGRSLLEFRDPLSLRPKTENVGADENREAIQWQCVPHQEERGGTD*
Ga0066903_1003706391	3300005764	Tropical Forest Soil	FIVVVFLFLSLVRPDLHIESGQSLLEFRDPLTLRPKTENVSADENREAIQWQCVPHQEERGGTD*
Ga0066903_1008386243	3300005764	Tropical Forest Soil	VQVAIVIDIAFMVAVLLFVSLVRPDLHIEAGQSLLEFRDPLTLMPKIENVSADENREAGQWQCTPRQETRGGTD*
Ga0066903_1057858461	3300005764	Tropical Forest Soil	AFIVAVFLFVSLVRPDLHIEGGQSLLEFRDPLTLMPKTESADDNREGGQSQCVPHQEARGGTD*
Ga0068870_102856264	3300005840	Miscanthus Rhizosphere	VQVAAIIDVAFIVAVFLFVSLVRPDLHIEGGRSLLEFRDPLSLMPRTENLGADENLEASQRHCIPLQVERGGTD*
Ga0075024_1001956851	3300006047	Watersheds	VQVAIVIDIAFVVVVFLFVSLVRPDLHIEGGRSLLEFRDPLSLMSKTESLGADENREVSGQCVPLQVESGGTD*
Ga0075026_1000865992	3300006057	Watersheds	VQVAIVIDIAFVVVVFLFVSLVRPDLHIEGGRSLLEFRDPLSLMPKTEALGADENREVSQRQCVPLEVESGGTD*
Ga0070716_1009254102	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	AIVIDIAFVVAIFLFVSLVRPDIHIESGRSLLEFRDPLSLRPKTENVGADENREAIQWQCVPHQEERGGTD*
Ga0079222_119673671	3300006755	Agricultural Soil	PEASVQVAVIIDVAFIVAVFLFVSLVRPDLHIEGGRSLLEFRDPLSLMPRTDNLGADENLETSQRQCVPLQVERGGTD*
Ga0079220_119448251	3300006806	Agricultural Soil	VQVAVIIDVAFIVAVFLFVSLVRPDLHIEGGRSLLEFRDPLSLMPRTENLGADENLETSQRQCVPLQVERGGTD*
Ga0075433_103391742	3300006852	Populus Rhizosphere	VQIAILIDIAFIVVVFLFLSLVRPDLHIESGQSLLEFRDPLTLRTKTESVSADENREASQQQCIPHQEAGGGTD*
Ga0075425_1001228533	3300006854	Populus Rhizosphere	VQIAILIDIAFIVVVFLFLSLVRPDLHIESGQSLLEFRDPLTLRPKTENVSADENREASQQQCVPHQEAGGGTD*
Ga0075424_1014029072	3300006904	Populus Rhizosphere	ALVQIAIAIDIAFIVVVFLFLDLISIYIYRESGRSLLEFRDPLTLLPKTENVSADENWEASQRQCVPHQEAGGGID*
Ga0075424_1015277291	3300006904	Populus Rhizosphere	NVRPEASVQVAVIIDVAFIVAVFFFVSMVRPDLHIEGGRSLLEFRDPLSLMPRTENLGADENLESSQRQCVPLQVERGGTD*
Ga0075436_1006906552	3300006914	Populus Rhizosphere	VQVAVIIDVAFIVAVFFFVSLVRPDLHIEGGRSLLEFRDPLSLMPRTENLGADENLESSQRQCVPLQVERGGTD*
Ga0079219_110940542	3300006954	Agricultural Soil	VQVAVIVDVAFVVAVFLFVSLVRPDLHIEGGRSLLEFRDPLSLMPRTENLGADENLETSQRQCVPLQVERGGTD*
Ga0111539_113630541	3300009094	Populus Rhizosphere	VQVAIVIDIVFIVVVFLFLSLVRPDLHIEGGRSLLEFRDPLSLGPKTENVSADENREASQRQCVPRQEARGGTD*
Ga0111539_132594532	3300009094	Populus Rhizosphere	VIVQAAIVIDIAFVVAIFLFVSLVRPDIHIESGRSLLEFRDPLSLRPKTENVGADENREAIQWQCVPHQEERGGTD*
Ga0105245_111656862	3300009098	Miscanthus Rhizosphere	VIVQAAIVIDIAFVVAIFLFVSLVRPDIHIESGRSLLEFRDPLSLRPKTENVGADENREAIQW
Ga0114129_111597082	3300009147	Populus Rhizosphere	MAIVIDIAFIVVVFLFLSLVRPDLHIESGRSLLEFRDPLTLRPKTENVSADENREASQRQCAPHEEAGGGTD*
Ga0105249_121178542	3300009553	Switchgrass Rhizosphere	LSDVRPEVIVQAAIVIDIAFVVAIFLFVSLVRPDIHIESGRSLLEFRDPLSLRPKTENVGADENREAIQWQCVPHQEERGGTD*
Ga0126374_118131732	3300009792	Tropical Forest Soil	TGNGLPDARPEEIVQAAIVIDITFVVAVFLFVSLVRPDIHIEGGRSLLEFRDPLSLRPKTENFGADENREAVQWQCVPHQEERGGTD*
Ga0126380_100145992	3300010043	Tropical Forest Soil	MAIVIDIAFIVAVFLFVSLVRPDLHIEGGQSLLEFRDPLTLMPKTDSADGNREGSQSQCVPHQEARGGTD*
Ga0126380_100333755	3300010043	Tropical Forest Soil	VQIAIVIDIAFIVVVFLSLSLVRPDLHIESGRSLLEFRDPLTLRPKTENVSADENREASQPQCVPHQEARGGTD*
Ga0126380_101934513	3300010043	Tropical Forest Soil	MAKAKSDKKSERSVQVAIVIDISFMIAVLLFVSLVRPDLHIEAGQSLLEFRDPLTLMPKIENVSTDENRETGQWQYAPGQETRGGTD*
Ga0126380_102950262	3300010043	Tropical Forest Soil	MAIVIDIAFVVAVFLFVSLARPDIHIEGGRSLLEFRDPLSLAPKTENVSADEDREASQWQCVPHQEARGGTD*
Ga0126380_120034302	3300010043	Tropical Forest Soil	VVFVVAVFLFVSLVRPDLHLEGGRSLLEFRDPLSLMPSTETPGADENPDAGQRQCVPQVERGGTD*
Ga0126384_102613283	3300010046	Tropical Forest Soil	MAIVIDIAFIVAVFLFVSLVRPDLHIEGGQSLLEFRDPLTLMPKTDSADDNREGSQSQCVPHQEARGGTD*
Ga0126384_106959032	3300010046	Tropical Forest Soil	VQIAIVIDIAFIVVVFLSLSLVRPDLHIESGRSLLEFRDPLTLRPKTENVSADENREASQPQCVPHQEAGGGTD*
Ga0126384_110704104	3300010046	Tropical Forest Soil	VQAAIVIDITFVVAVFLFVSLVRPDIHIEGGRSLLEFRDPLSLRPKPENVGADENREAIQWQCVPRK
Ga0126382_1000103417	3300010047	Tropical Forest Soil	VEPAIAIDIAFIVAVFLFVSLVRPDLHIEGGQSLLEFRDPLTLGPKTENASADENREASQWQCVPHQEARGEQIDISQKVQP*
Ga0126382_101417903	3300010047	Tropical Forest Soil	VQIAIVIDIAFIVVVFLFLSLVRPDLHIENGRSLLEFRDPLSLMPKTENVSADENREASQLQCVPHQEARGGTD*
Ga0126376_101356894	3300010359	Tropical Forest Soil	VQVAIVIDIAFIVVVFLFLSLVRPDLHIESGQSLLEFRDPLTLRPKTENVSADENREASQPQCVPHQEARGGTD*
Ga0126376_101775173	3300010359	Tropical Forest Soil	MAKAKSDKKSERSVQVAIVIDISFMIAVFLFVSLVRPDLHLEAGQSLLEFRDPLTLTPKIENVSADENRETGQWQYAPGQETRGGTD*
Ga0126376_101860584	3300010359	Tropical Forest Soil	VQAAIVIDIAFVGAVFLFVSLVRPDIHIEGGRSLLEFRDPLSLRPKTENFGADENREAVQWQCVPHQEERGGTD*
Ga0126372_100949984	3300010360	Tropical Forest Soil	VQTAAIIDIAFVVAVFLFVSLVRPDLHIEGGRSLLEFRDPLSLMPKTENLGADENLEASRQQCAPLQVERGDTD*
Ga0126378_102958274	3300010361	Tropical Forest Soil	VETAIAIDIAFIVAVFLFVSLVRPDLHIEGGQSLLEFRDPLTLGPKTENASADENREASQWQCVSHQEARGGRDRGRNCAAIKS
Ga0126377_100689196	3300010362	Tropical Forest Soil	VQAAIVIDIAFVVAVFLFVSLVRPDIHIEGGRSLLEFRDPLSLRPKTENFGADENREAVQWQCVPHQEERGGTD*
Ga0126379_102196591	3300010366	Tropical Forest Soil	VQVAIVIDIAFIVAVFLFVSLARPDLHIEGGQSLLEFRDPLTLMPKTESADDNREGSQWQCV
Ga0126379_111902703	3300010366	Tropical Forest Soil	VQVAIAVDIAFVVAVFLFVSLVRPDLHIEGGQSLLEFRDPLTLMPKTESADDNREGSQWQCV
Ga0126379_125729881	3300010366	Tropical Forest Soil	MAIVIDVAFIVVVFLFLSLVRPDLHIESGQSLLEFRDPLTLRPKTENVSEDENWQTNQRQCIPHQEMGGGTD*
Ga0126381_1020549702	3300010376	Tropical Forest Soil	VETAIAIDIAFIVAVFLFVSLVRPDLHIEGGQSLLEFRDPLTLGPKTENASADENREASQWQCVPHQEARGEQIDISQKVQP*
Ga0126381_1028661271	3300010376	Tropical Forest Soil	KSDKKSERSVQVAIVIDISFMIAVFLFVSLVRPDLHIEGGQSLLEFRDPLTLMPKTESADDNREGSQWQCVPHQEARGGTD*
Ga0126383_116235041	3300010398	Tropical Forest Soil	MAIVIDIAFIVVVFLFLSLVRPDLHIESGQSLLEFRDPLTLRPKTENVSADENWETSQRQCIPHQEMRGGTD*
Ga0134122_101498252	3300010400	Terrestrial Soil	MSGREASVQVAVIIDVAFVVAVFLFVSLVRPDLHIEGGRSLLEFRDPLSLMPRMENLGTDENLETSQRQCVPLQVERGGTD*
Ga0134123_101924772	3300010403	Terrestrial Soil	VQVAVIVDVAFIVAVFLFVSLVRPDLHIEGGRSLLEFRDPLSLMPRTENLGADENLEASQRQCVPLQVERGGTD*
Ga0124844_10142683	3300010868	Tropical Forest Soil	VQAAIVIDITFVVAVFLFVSLVRPDIHIEGGRSLLEFRDPLSLRPKTENFGADENREAVQWQCVPHQEERGGTD*
Ga0157344_10184681	3300012476	Arabidopsis Rhizosphere	VQVAVIIDVAFVVAVFLFVSLVRPDLHIEGGRSLLEFRDPLSLMPRTENLGADENLETSQRQCVPLQVERGGTD*
Ga0157346_10102953	3300012480	Arabidopsis Rhizosphere	FLFVSLVRPDLHIEGGRSLLEFRDPLSLMPKTENLGADENLETSQRQCVPLQVERGGTD*
Ga0157335_10251351	3300012492	Arabidopsis Rhizosphere	VQVAVIIDVAFIVAVFFFVSLVRPDLHMEGGRSLLEFRDPLSLMPRTENLGADENLEASQRQCVPLQVERGGTD*
Ga0126375_107677361	3300012948	Tropical Forest Soil	EASVQIAIVIDIAFIVVVFLFLSLVRPDLHIENGRSLLEFRDPLSLMPKTENVSADENREASQLQCVPHQEARGGTD*
Ga0126375_115231511	3300012948	Tropical Forest Soil	MAIVIDVAFIVVVFLFLSLVRPDLHIESGQSLLEFRDPLTLRPKTENVSADENWETSQQQCIPHQEMRGGTD*
Ga0164300_101220791	3300012951	Soil	VQVAVIVDVAFVVAVFLFVSLVRPDLHIEGGRSLLEFRDPLSLMPRTENLGADENLESSQRQCVPLQVERGGTD*
Ga0164298_106959241	3300012955	Soil	VIVQAAIVIDIAFVVAIFLFVSLVRPDIHIESGRSLLEFRDPLSLRPKTENIGADENREAIQWQCVPHQEERGGTD*
Ga0164303_101465144	3300012957	Soil	VQAAIVIDIAFVVAIFLFVSLVRPDIHIESGRSLLEFRDPLSLRPKTDNFGADENRAAIQWQCVPHQEERGGTD*
Ga0126369_104622041	3300012971	Tropical Forest Soil	MAIVVDIAFIVVVFLFLSLVRPDLHIESGQSLLEFRDPLTLRPKTENVSADENWETSQRQCIPHQEMRGGTD*
Ga0164309_102943332	3300012984	Soil	VIVQAAIVIDIAFVVAIFLFVSLVRPDIHIESGRSLLEFRDPLSLRPKTDNFGADENREAIQWQCVPHQEERGGTD*
Ga0157378_128933172	3300013297	Miscanthus Rhizosphere	AIFLFVSLVRPDIHIESGRSLLEFRDPLSLRPKTENVGADENREAIQWQCVPHQEERGGTD*
Ga0163162_102729545	3300013306	Switchgrass Rhizosphere	TGKGLSDVRPEVIVQAAIVIDIAFVVAIFLFVSLVRPDIHIESGRSLLEFRDPLSLRPKTENVGADENREAIQWQCVPHQEERGGTD*
Ga0157372_127760213	3300013307	Corn Rhizosphere	VQVAVIVDVAFIVAVFLFVSLVRPDLHIEGGRSLLEFRDPLSLMPRMENLGTDENLETSQRQCVPLQVERGG
Ga0182008_102356991	3300014497	Rhizosphere	FVVAVFLFVSLVRPDLHIEGGRSLLEFRDPLSLMPRTENLGADENLEASQRQCVPLQVERGGTD*
Ga0132258_104138783	3300015371	Arabidopsis Rhizosphere	MAIVIDIAFIVVVFLFLSLVRPDLHIESGQSLLEFRDPLTLGPKTENVSADENWETGQRQCIPHQEMGGGTD*
Ga0132256_1007252121	3300015372	Arabidopsis Rhizosphere	VQVAVIVDVAFVVAVFLFVSLVRPDLHIEGGRSLLEFRDPLSLMPRTENLGADENLEASQRQCVPLQ
Ga0182032_100014982	3300016357	Soil	VQVAIVIDIVFIVAVFLFVSLVRPDLHIEGGQSLLEFRDPLTLMPKTENADDNREGSQSQCVPYQEARGGTY
Ga0182032_110147091	3300016357	Soil	MAIVIDIAFIVVVFLFLSLVRPDLHIEGGQSLLEFRDPLTLMPKTESADDNREGSQWQCVPHQEARGGTD
Ga0182040_100007095	3300016387	Soil	VQVAIVIDIAFIVAVFLFVSLVRPDLHIEGGQSLLEFRDPLTLMPKTENADDNREGSQSQCVPYQEARGGTD
Ga0182038_100222083	3300016445	Soil	VQVAIVIDIAFMVAVLLFVSLVRPDLHIEGGQSLLEFRDPLTLIPKTESADDNWEGSQWQCVPHQEARGGTD
Ga0187785_100045183	3300017947	Tropical Peatland	VQVAIVVDIAFMVAVFLFVSLVRPDLHIEAGQSLLEFRDPLTLLPRIENVSADENRKTGQWQYAPGQETRGGTD
Ga0187765_100245293	3300018060	Tropical Peatland	VQTAAIIDIAFVVAVFLFVSLVRPDLHIEGGRSLLEFRDPLSLMPRTENLGADENFEASRQQCAPLQMDRGDTD
Ga0184611_10403632	3300018067	Groundwater Sediment	VQIAIVIDIAFMVVVFLFVSLVRPDLHIESGRSLLEFRDPLSLRPKTENVSADKNREASQQQCVPHQEERGGTD
Ga0184635_102570701	3300018072	Groundwater Sediment	VQIAIVIDIAFMVVVFLFVSLVRPDLHIESGRSLLEFRDPLSLRPKTENVSADKNREASQQQ
Ga0184624_102924902	3300018073	Groundwater Sediment	VQIAIVIDIAFMVVVFLFVSLVRPDLHIESGRSLLEFRDPLSLRPKTENVSADENREASQQQCVPHQEERGGTD
Ga0193723_10664721	3300019879	Soil	MPNVRSEARVQIAIVIDIAFMVVVFLFVSLVRPDLHIESGRSLLEFRDPLSLRPKTENVSADENREASQQQCVPHQEERGGTD
Ga0126371_107192031	3300021560	Tropical Forest Soil	MAIVIDIAFIVAVFLFVSLVRPDLHIEGGQSLLEFRDPLTLMPKTESADDNREGSQWQCVPHQEARGGTD
Ga0126371_115784662	3300021560	Tropical Forest Soil	MAIVIDIAFIVVVFLFLSLVRPDLHIESGQSLLEFRDPLTLRPKTENVSADENWETSQRQCIPHQEMRGGTD
Ga0126371_116944011	3300021560	Tropical Forest Soil	VAVFLFVSLVRPDLHIEGGQSLLEFRDPLTLMPKTESADDNREGSQWQCVPHQEARGGTD
Ga0126371_121669361	3300021560	Tropical Forest Soil	VAVFLFVSLVRPDLHIEGGQSLLEFRDPLTLMPKIENVDDNREGSQSQCVPYQEARGGTD
Ga0126371_133137572	3300021560	Tropical Forest Soil	MAKAKSDKKSERSVQVAIVIDISFMIAVFLFVSLVRPDLHIEAGQSLLEFRDPLTLMPKIENVSADENRETGQWQYAPGQETRGGTD
Ga0207642_102465202	3300025899	Miscanthus Rhizosphere	VQVSVIVDVAFVVAVFLFVSLVRPDLHIEGGRSLLEFRDPLSLMPRMENLGTDENLETSQRQCVPLQVERGGTD
Ga0207710_102211902	3300025900	Switchgrass Rhizosphere	VQVAAIIDVAFIVAVFLFVSLVRPDLHIEGGRSLLEFRDPLSLMPRTENLGADENLESSQRQCAPLQVERGGTD
Ga0207662_101672902	3300025918	Switchgrass Rhizosphere	VQVAVIVDVAFIVAVFLFVSLVRPDLHIEGGRSLLEFRDPLSLMPRTENLGADENLEASQRQCVPLQVERGGTD
Ga0207657_102579912	3300025919	Corn Rhizosphere	VQVAAIIDVAFIVAVFLFVSLVRPDLHIEGGRSLLEFRDPLSLMPRTENLGADENLESSQRQCVPLQVERGGTD
Ga0207668_105603213	3300025972	Switchgrass Rhizosphere	VQVAVIVDVAFIVAVFLFVSLVRPDLHIEGGRSLLEFRDPLSLMPRTENLGADENLESSQRQCAPLQVERGGTD
Ga0207677_106128311	3300026023	Miscanthus Rhizosphere	VQVAVIIDVAFVVAVFLFVSLVRPDLHIEGGRSLLEFRDPLSLMPRTENLGADENLEASQRQCVPFQVERGGTD
Ga0207678_109677392	3300026067	Corn Rhizosphere	MLGPEASVQVAVIIDVAFVVAVFLFVSLVRPDLHIEGGRSLLEFRDPLSLMPRTENLGADENLEASQRQCVPLQVERGGTD
Ga0208890_10347472	3300027523	Soil	VQVAVIVDVAFVVAVFLFVSLVRPDLHIEGGRSLLEFRDPLSLMPRTENLGADENLEASQRQCVPHREAGGETD
Ga0209465_101122802	3300027874	Tropical Forest Soil	VQVAIVIDIAFIVAVFLFVSLVRPDLHIEGGQSLLEFRDPLTLMPKTESADDNREGGQSQCVPHQEARGGTD
Ga0209465_106674331	3300027874	Tropical Forest Soil	VQVAIVIDIAFIVAVFLFVSLARPDLHIEGGQSLLEFRDPLTLMPKTESADDNRERSQW
Ga0209481_103376391	3300027880	Populus Rhizosphere	VQVAIVIDIVFIVVVFLFLSLVRPDLHIEGGRSLLEFRDPLSLGPKTENVSADENREASQRQCVPRQEARGGTD
Ga0209069_105040932	3300027915	Watersheds	VQVAIVIDIAFVVVVFLFVSLVRPDLHIEGGRSLLEFRDPLSLMSKTESLGADENREVSGQCVPLQVESGGTD
Ga0268265_109449364	3300028380	Switchgrass Rhizosphere	VQVAAIIDVAFIVAVFLFVSLVRPDLHIEGGRSLLEFRDPLSLMPRTENLGADENLESSQ
Ga0268264_100330334	3300028381	Switchgrass Rhizosphere	VQVAVIVDVAFVVAVFLFVSLVRPDLHIEGGRSLLEFRDPLSLMPRMENLGTDENLETSQRQCVPLQVERGGTD
Ga0307305_104602252	3300028807	Soil	VQIAIVIDVAFMVVVFLFVSLVRPDLHIESGRSLLEFRDPLSLGPKTENVSADENREASQQCV
Ga0307312_105456401	3300028828	Soil	VQIAIVIDIAFMVVVFLFVSLVRPDLHIESGRSLLEFRDPLSLRPKTENVSADENREASQQCVPHQEARGETD
Ga0307498_100003203	3300031170	Soil	VQVAVIIDVAFIVAVFLFVSLVRPDLHIEGGRSLLEFRDPLSLMPRTENLGADENLESSQRQCVPLQVERGGTD
Ga0318541_100020007	3300031545	Soil	MAIVIDIAFIVVVFLFLSLVRPDLHIEGGQSLLEFRDPLTLIPKTESADDNWEGSQWQCVPHQEARGGTD
Ga0318541_100046702	3300031545	Soil	VQVAIVIDIVFIVAVFLFVSLVRPDLHIEGGQSLLEFRDPLTLMPKTENADDNREGSQSQCVPYQEARGGTD
Ga0318572_108284781	3300031681	Soil	MAIVIDIAFIVVVFLFLSLVRPDLHIEGGQSLLEFRDPLTLMPKTENADDNREGSQSQ
Ga0318560_103024091	3300031682	Soil	LPDVESERPVQVAIVIDIVFIVAVFLFVSLVRPDLHIEGGQSLLEFRDPLTLMPKTENAEQSQCVPYQEARGGTD
Ga0318501_106451721	3300031736	Soil	VLPDVESERPVQVAIVIDIVFIVAVFLFVSLVRPDLHIEGGQSLLEFRDPLTLMPKTENADDNREGSQSQCVPYQEARGGTD
Ga0318494_106054251	3300031751	Soil	LPDVESERPVQVAIVIDIVFIVAVFLFVSLVRPDLHIEGGQSLLEFRDPLTLMPKTENADDNREGSQSQCVPYQEARGGTD
Ga0318536_102049262	3300031893	Soil	VQVAIVIDIVFIVAVFLFVSLVRPDLHIEGGQSLLEFRDPLTLIPKTESADDNWEGSQWQCVPHQEARGGTD
Ga0318551_109381231	3300031896	Soil	VLPDVESERPVQVAIVIDIVFIVAVFLFVSLVRPDLHIEGGQSLLEFRDPLTLMPKTENADDNREGSQSQCVPYQGARGGTD
Ga0306923_1002285210	3300031910	Soil	MAIVIDIAFIVVIFLFLSLVRPDLHIESGQSLLEFRDPLTLRPKTENVSADENWETSQQQCIPHQEMRGGTD
Ga0310916_110570052	3300031942	Soil	IVIDIAFIVVIFLFLSLVRPDLHIESGQSLLEFRDPLTLRPKTENVSADENWETSQQQCIPHQEMRGGTD
Ga0310884_105756861	3300031944	Soil	EASVQVAVIIDVAFVVAVFLFVSLVRPDLHIEGGRSLLEFRDPLSLMPRTENLGADENLESSQRQCVPLQVERGGTD
Ga0310913_100045561	3300031945	Soil	IVIDIAFIVVVFLFLSLVRPDLHIEGGQSLLEFRDPLTLIPKTESADDNWEGSQWQCVPHQEARGGTD
Ga0318530_102655922	3300031959	Soil	MAIVIDIAFIVVVFLFLSLVRPDLHIEGGQSLLEFRDPLTLMPKTENADDNREGSQSQCVPYQEARGGTD
Ga0310903_101077064	3300032000	Soil	VQVAVIIDVAFIVAVFFFVSLVRPDLHIEGGRSLLEFRDPLSLMPRTENLGADENLESSQRQCVPLQVERGGTD
Ga0310902_107312372	3300032012	Soil	VQVAVIIDVAFVVAVFLFVSLVRPDLHIEGGRSLLEFRDPLSLMPRTENLGADENLEASQRQCVPLQ
Ga0307471_1024939581	3300032180	Hardwood Forest Soil	IAFVVAIFLFVSLVRPDIHIESGRSLLEFRDPLSLRPKTENVGADENREAIQWQCVPHQEERGGTD
Ga0306920_1021213601	3300032261	Soil	MAIVIDIAFIVAVFLFLSLVRPDLHIESGQSLLEFRDPLTLRPKTENVSADENWETSQRQCIPHQEMRGGTD
Ga0310914_100729122	3300033289	Soil	VQVAIVIDIVFIVAVFLFVSLVRPDLHIEGGQSLLEFRDPLTLMPKTENADDNREGSQSQCVPYQGARGGTD

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F049170

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences