Metagenome / Metatranscriptome Family F049267

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F049267
Family Type	Metagenome / Metatranscriptome
Number of Sequences	147
Average Sequence Length	74 residues
Representative Sequence	MRELELHVEDHQIIVNMIDTRLTITYQLSSEGLLEENKFWTLDGGDAEFRQRAWQAAHSKARQLAWIPRLKSVA
Number of Associated Samples	103
Number of Associated Scaffolds	147

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	64.63 %
% of genes near scaffold ends (potentially truncated)	45.58 %
% of genes from short scaffolds (< 2000 bps)	84.35 %
Associated GOLD sequencing projects	89
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (67.347 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil (14.966 % of family members)
Environment Ontology (ENVO)	Unclassified (27.891 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (63.946 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 33.78% β-sheet: 31.08% Coil/Unstructured: 35.14%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 147 Family Scaffolds
PF08239	SH3_3	7.48
PF05099	TerB	4.76
PF04542	Sigma70_r2	3.40
PF04519	Bactofilin	2.04
PF13407	Peripla_BP_4	2.04
PF00313	CSD	1.36
PF08592	Anthrone_oxy	1.36
PF07568	HisKA_2	0.68
PF05239	PRC	0.68
PF00175	NAD_binding_1	0.68
PF00902	TatC	0.68
PF12625	Arabinose_bd	0.68
PF01627	Hpt	0.68
PF00589	Phage_integrase	0.68
PF00656	Peptidase_C14	0.68
PF13663	DUF4148	0.68
PF01183	Glyco_hydro_25	0.68
PF09534	Trp_oprn_chp	0.68
PF01757	Acyl_transf_3	0.68
PF16980	CitMHS_2	0.68
PF02518	HATPase_c	0.68
PF13557	Phenol_MetA_deg	0.68
PF06803	DUF1232	0.68

COG ID	Name	Functional Category	% Frequency in 147 Family Scaffolds
COG3793	Tellurite resistance protein TerB	Inorganic ion transport and metabolism [P]	4.76
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	3.40
COG1191	DNA-directed RNA polymerase specialized sigma subunit	Transcription [K]	3.40
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	3.40
COG4941	Predicted RNA polymerase sigma factor, contains C-terminal TPR domain	Transcription [K]	3.40
COG1664	Cytoskeletal protein CcmA, bactofilin family	Cytoskeleton [Z]	2.04
COG0805	Twin-arginine protein secretion pathway component TatC	Intracellular trafficking, secretion, and vesicular transport [U]	0.68
COG3339	Uncharacterized membrane protein YkvA, DUF1232 family	Function unknown [S]	0.68
COG3757	Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family	Cell wall/membrane/envelope biogenesis [M]	0.68
COG3920	Two-component sensor histidine kinase, HisKA and HATPase domains	Signal transduction mechanisms [T]	0.68
COG4249	Uncharacterized conserved protein, contains caspase domain	General function prediction only [R]	0.68

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.35 %
All Organisms	root	All Organisms	32.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.35 %
cellular organisms	root	All Organisms → cellular organisms	32.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.35 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	32.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.35 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	25.85 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.68 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.35 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	22.45 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	1.36 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.68 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.35 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	19.05 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1.36 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.68 %
Caulobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales	0.68 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.35 %
unclassified Hyphomicrobiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales	11.56 %
Beijerinckiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae	2.72 %
Desulfobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales	1.36 %
Caulobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae	0.68 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	0.68 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.68 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.35 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	11.56 %
Methylocapsa	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Methylocapsa	2.72 %
Desulfobulbaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobulbaceae	1.36 %
Caulobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Caulobacter	0.68 %
Methyloceanibacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter	0.68 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.68 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.35 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	11.56 %
Methylocapsa palsarum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Methylocapsa → Methylocapsa palsarum	2.72 %
Desulfogranum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobulbaceae → Desulfogranum	1.36 %
unclassified Caulobacter	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Caulobacter → unclassified Caulobacter	0.68 %
Methyloceanibacter superfactus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter superfactus	0.68 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.68 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.35 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	11.56 %
Methylocapsa palsarum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Methylocapsa → Methylocapsa palsarum	2.72 %
Desulfogranum japonicum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobulbaceae → Desulfogranum → Desulfogranum japonicum	1.36 %
Caulobacter sp. 17J80-11	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Caulobacter → unclassified Caulobacter → Caulobacter sp. 17J80-11	0.68 %
Methyloceanibacter superfactus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter superfactus	0.68 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.68 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.68 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2088090014\|GPIPI_16685674	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4800	Open in IMG/M
2088090014\|GPIPI_17392284	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Methylocapsa → Methylocapsa palsarum	1259	Open in IMG/M
2088090015\|GPICI_8920792	Not Available	2865	Open in IMG/M
2170459017\|G14TP7Y01CZ15O	Not Available	712	Open in IMG/M
2228664022\|INPgaii200_c1178962	Not Available	658	Open in IMG/M
3300000890\|JGI11643J12802_10204169	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Caulobacter → unclassified Caulobacter → Caulobacter sp. 17J80-11	1763	Open in IMG/M
3300000890\|JGI11643J12802_11985100	Not Available	1062	Open in IMG/M
3300000953\|JGI11615J12901_11374106	Not Available	626	Open in IMG/M
3300000955\|JGI1027J12803_103913178	Not Available	508	Open in IMG/M
3300000955\|JGI1027J12803_107216265	Not Available	785	Open in IMG/M
3300000956\|JGI10216J12902_103963385	Not Available	1337	Open in IMG/M
3300000956\|JGI10216J12902_104640085	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2621	Open in IMG/M
3300001431\|F14TB_100050660	All Organisms → cellular organisms → Bacteria	709	Open in IMG/M
3300004114\|Ga0062593_100340230	Not Available	1305	Open in IMG/M
3300004114\|Ga0062593_100431826	Not Available	1192	Open in IMG/M
3300004114\|Ga0062593_100549172	Not Available	1086	Open in IMG/M
3300004114\|Ga0062593_101100164	Not Available	825	Open in IMG/M
3300004156\|Ga0062589_100046744	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobulbaceae → Desulfogranum → Desulfogranum japonicum	2383	Open in IMG/M
3300004156\|Ga0062589_100429834	Not Available	1085	Open in IMG/M
3300004156\|Ga0062589_101590594	All Organisms → cellular organisms → Bacteria → Proteobacteria	647	Open in IMG/M
3300004463\|Ga0063356_100981679	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobulbaceae → Desulfogranum → Desulfogranum japonicum	1203	Open in IMG/M
3300004463\|Ga0063356_103852324	Not Available	646	Open in IMG/M
3300004480\|Ga0062592_101658367	Not Available	620	Open in IMG/M
3300004633\|Ga0066395_10249077	Not Available	952	Open in IMG/M
3300005330\|Ga0070690_101796994	Not Available	500	Open in IMG/M
3300005332\|Ga0066388_100933182	Not Available	1441	Open in IMG/M
3300005332\|Ga0066388_101954699	Not Available	1049	Open in IMG/M
3300005332\|Ga0066388_102518996	Not Available	935	Open in IMG/M
3300005332\|Ga0066388_102626366	Not Available	918	Open in IMG/M
3300005332\|Ga0066388_103537195	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	797	Open in IMG/M
3300005332\|Ga0066388_103751012	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	775	Open in IMG/M
3300005332\|Ga0066388_104507046	Not Available	709	Open in IMG/M
3300005332\|Ga0066388_104911370	Not Available	680	Open in IMG/M
3300005332\|Ga0066388_105928982	Not Available	617	Open in IMG/M
3300005332\|Ga0066388_107732064	Not Available	538	Open in IMG/M
3300005334\|Ga0068869_100285735	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1328	Open in IMG/M
3300005338\|Ga0068868_100085689	Not Available	2531	Open in IMG/M
3300005345\|Ga0070692_10648082	Not Available	705	Open in IMG/M
3300005363\|Ga0008090_14545793	Not Available	532	Open in IMG/M
3300005406\|Ga0070703_10103251	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1008	Open in IMG/M
3300005434\|Ga0070709_10040284	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	2871	Open in IMG/M
3300005435\|Ga0070714_101490590	Not Available	661	Open in IMG/M
3300005436\|Ga0070713_101128731	Not Available	758	Open in IMG/M
3300005467\|Ga0070706_102088664	Not Available	512	Open in IMG/M
3300005536\|Ga0070697_100200426	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1697	Open in IMG/M
3300005546\|Ga0070696_101606192	Not Available	559	Open in IMG/M
3300005578\|Ga0068854_100099365	Not Available	2179	Open in IMG/M
3300005713\|Ga0066905_100399784	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1114	Open in IMG/M
3300005764\|Ga0066903_100077463	All Organisms → cellular organisms → Bacteria	4310	Open in IMG/M
3300005764\|Ga0066903_100445503	All Organisms → cellular organisms → Bacteria	2160	Open in IMG/M
3300005764\|Ga0066903_100553853	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1973	Open in IMG/M
3300005764\|Ga0066903_100703143	Not Available	1782	Open in IMG/M
3300005764\|Ga0066903_102030060	Not Available	1105	Open in IMG/M
3300005764\|Ga0066903_102121043	Not Available	1082	Open in IMG/M
3300005764\|Ga0066903_102529719	Not Available	994	Open in IMG/M
3300005764\|Ga0066903_106141000	Not Available	628	Open in IMG/M
3300005764\|Ga0066903_108774472	Not Available	513	Open in IMG/M
3300005843\|Ga0068860_100225455	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1820	Open in IMG/M
3300005843\|Ga0068860_100921024	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Methylocapsa → Methylocapsa palsarum	890	Open in IMG/M
3300006058\|Ga0075432_10008249	All Organisms → cellular organisms → Bacteria → Proteobacteria	3551	Open in IMG/M
3300006163\|Ga0070715_10077375	Not Available	1501	Open in IMG/M
3300006804\|Ga0079221_10401688	Not Available	849	Open in IMG/M
3300006903\|Ga0075426_10638789	Not Available	796	Open in IMG/M
3300006904\|Ga0075424_102212601	Not Available	579	Open in IMG/M
3300006954\|Ga0079219_10066365	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1630	Open in IMG/M
3300009156\|Ga0111538_10160682	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2854	Open in IMG/M
3300009162\|Ga0075423_12293610	Not Available	587	Open in IMG/M
3300009792\|Ga0126374_11011229	Not Available	653	Open in IMG/M
3300009792\|Ga0126374_11084381	Not Available	634	Open in IMG/M
3300010046\|Ga0126384_11004265	Not Available	760	Open in IMG/M
3300010047\|Ga0126382_10009318	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	4627	Open in IMG/M
3300010047\|Ga0126382_10142708	Not Available	1627	Open in IMG/M
3300010358\|Ga0126370_10102804	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1981	Open in IMG/M
3300010360\|Ga0126372_10068063	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	2517	Open in IMG/M
3300010361\|Ga0126378_10138708	Not Available	2460	Open in IMG/M
3300010361\|Ga0126378_10564722	Not Available	1252	Open in IMG/M
3300010366\|Ga0126379_13008738	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	564	Open in IMG/M
3300010371\|Ga0134125_10274350	Not Available	1873	Open in IMG/M
3300010371\|Ga0134125_12048101	Not Available	622	Open in IMG/M
3300010398\|Ga0126383_10710013	Not Available	1084	Open in IMG/M
3300010398\|Ga0126383_12685612	Not Available	581	Open in IMG/M
3300010398\|Ga0126383_13154082	Not Available	538	Open in IMG/M
3300010868\|Ga0124844_1057464	Not Available	1391	Open in IMG/M
3300012507\|Ga0157342_1063856	Not Available	546	Open in IMG/M
3300012905\|Ga0157296_10036652	Not Available	1078	Open in IMG/M
3300012907\|Ga0157283_10001762	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	3074	Open in IMG/M
3300012911\|Ga0157301_10411290	Not Available	527	Open in IMG/M
3300012912\|Ga0157306_10434330	Not Available	522	Open in IMG/M
3300012915\|Ga0157302_10004394	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	3183	Open in IMG/M
3300012948\|Ga0126375_11239421	Not Available	623	Open in IMG/M
3300013100\|Ga0157373_10043201	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	3220	Open in IMG/M
3300013104\|Ga0157370_10070558	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3298	Open in IMG/M
3300013296\|Ga0157374_12880789	Not Available	508	Open in IMG/M
3300013307\|Ga0157372_11984760	All Organisms → cellular organisms → Bacteria	669	Open in IMG/M
3300015372\|Ga0132256_100231261	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1909	Open in IMG/M
3300016294\|Ga0182041_10262675	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1412	Open in IMG/M
3300016294\|Ga0182041_10454311	Not Available	1101	Open in IMG/M
3300016341\|Ga0182035_12008875	Not Available	525	Open in IMG/M
3300016357\|Ga0182032_10704244	Not Available	848	Open in IMG/M
3300016357\|Ga0182032_11889926	Not Available	523	Open in IMG/M
3300016404\|Ga0182037_10795206	Not Available	815	Open in IMG/M
3300016404\|Ga0182037_11060133	Not Available	708	Open in IMG/M
3300016404\|Ga0182037_12048759	Not Available	514	Open in IMG/M
3300016422\|Ga0182039_10952237	Not Available	768	Open in IMG/M
3300016445\|Ga0182038_10212919	Not Available	1530	Open in IMG/M
3300019356\|Ga0173481_10010977	All Organisms → cellular organisms → Bacteria → Proteobacteria	2559	Open in IMG/M
3300019361\|Ga0173482_10131105	Not Available	952	Open in IMG/M
3300019362\|Ga0173479_10415679	All Organisms → cellular organisms → Bacteria	653	Open in IMG/M
3300021560\|Ga0126371_10452736	Not Available	1429	Open in IMG/M
3300021560\|Ga0126371_12216948	Not Available	663	Open in IMG/M
3300021560\|Ga0126371_13175198	Not Available	556	Open in IMG/M
3300022883\|Ga0247786_1011931	Not Available	1607	Open in IMG/M
3300023067\|Ga0247743_1039523	Not Available	661	Open in IMG/M
3300025885\|Ga0207653_10010074	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	2948	Open in IMG/M
3300025905\|Ga0207685_10555989	All Organisms → cellular organisms → Bacteria	611	Open in IMG/M
3300025910\|Ga0207684_11645394	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	519	Open in IMG/M
3300025923\|Ga0207681_10557525	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Methylocapsa → Methylocapsa palsarum	943	Open in IMG/M
3300025928\|Ga0207700_10573479	Not Available	1003	Open in IMG/M
3300025981\|Ga0207640_11467310	All Organisms → cellular organisms → Bacteria	612	Open in IMG/M
3300027717\|Ga0209998_10182692	Not Available	546	Open in IMG/M
3300027873\|Ga0209814_10015328	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	3065	Open in IMG/M
3300031543\|Ga0318516_10443311	Not Available	747	Open in IMG/M
3300031573\|Ga0310915_11182000	Not Available	529	Open in IMG/M
3300031573\|Ga0310915_11188448	Not Available	528	Open in IMG/M
3300031716\|Ga0310813_10807637	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Methylocapsa → Methylocapsa palsarum	845	Open in IMG/M
3300031724\|Ga0318500_10243602	Not Available	871	Open in IMG/M
3300031781\|Ga0318547_10800629	Not Available	587	Open in IMG/M
3300031833\|Ga0310917_10045355	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2676	Open in IMG/M
3300031858\|Ga0310892_11033350	Not Available	580	Open in IMG/M
3300031890\|Ga0306925_10254189	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter superfactus	1894	Open in IMG/M
3300031897\|Ga0318520_10216089	Not Available	1135	Open in IMG/M
3300031910\|Ga0306923_11732021	Not Available	644	Open in IMG/M
3300031910\|Ga0306923_12162247	Not Available	559	Open in IMG/M
3300031912\|Ga0306921_12544519	Not Available	530	Open in IMG/M
3300031913\|Ga0310891_10141123	Not Available	775	Open in IMG/M
3300031941\|Ga0310912_10792322	Not Available	732	Open in IMG/M
3300031946\|Ga0310910_11230736	Not Available	580	Open in IMG/M
3300031954\|Ga0306926_12238939	Not Available	607	Open in IMG/M
3300032059\|Ga0318533_11262613	Not Available	540	Open in IMG/M
3300032076\|Ga0306924_10268304	Not Available	1960	Open in IMG/M
3300032076\|Ga0306924_10295566	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1859	Open in IMG/M
3300032076\|Ga0306924_11494445	Not Available	717	Open in IMG/M
3300032179\|Ga0310889_10216152	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	893	Open in IMG/M
3300032205\|Ga0307472_100505447	All Organisms → cellular organisms → Bacteria	1043	Open in IMG/M
3300032261\|Ga0306920_102883377	Not Available	652	Open in IMG/M
3300033412\|Ga0310810_10206279	Not Available	2214	Open in IMG/M
3300034663\|Ga0314784_058807	Not Available	722	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	84.35%
Host-Associated	Host-Associated	14.97%
Engineered	Engineered	0.68%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	84.35%
Plants	Host-Associated → Plants	14.97%
Solid Waste	Engineered → Solid Waste	0.68%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	84.35%
Rhizosphere	Host-Associated → Plants → Rhizosphere	8.16%
Rhizoplane	Host-Associated → Plants → Rhizoplane	6.80%
Grass	Engineered → Solid Waste → Grass	0.68%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	59.18%
Loam	Environmental → Terrestrial → Soil → Loam	25.17%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	6.80%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	6.80%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.36%
Composting	Engineered → Solid Waste → Grass → Composting	0.68%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	20.41%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	19.73%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	14.97%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	9.52%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	8.16%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	7.48%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	6.80%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	6.80%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	2.72%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.36%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.68%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.68%
Unclassified	Engineered → Solid Waste → Grass → Composting → Unclassified	0.68%

Habitat	Taxonomy	Distribution
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	14.97%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	12.93%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	11.56%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	8.16%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	7.48%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	6.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	6.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	5.44%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	4.08%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	2.72%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	2.04%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	2.04%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.36%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.36%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.36%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.36%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.36%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.36%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.68%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.68%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.68%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.68%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	0.68%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.68%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.68%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.68%
Switchgrass, Maize And Mischanthus Litter	Engineered → Solid Waste → Grass → Composting → Unclassified → Switchgrass, Maize And Mischanthus Litter	0.68%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	0.68%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2088090014	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
2088090015	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
2170459017	Litter degradation ZMR4	Engineered	Open in IMG/M
2228664022	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000890	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000953	Soil microbial communities from Great Prairies - Kansas Corn soil	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001431	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.4TB clc assemly	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005345	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005406	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300006058	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1	Host-Associated	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010868	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (PacBio error correction)	Environmental	Open in IMG/M
3300012507	Arabidopsis rhizosphere microbial communities from North Carolina - M.Cvi.7.yng.070610	Host-Associated	Open in IMG/M
3300012905	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S013-104B-2	Environmental	Open in IMG/M
3300012907	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S044-104R-1	Environmental	Open in IMG/M
3300012911	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S088-202R-2	Environmental	Open in IMG/M
3300012912	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S163-409C-2	Environmental	Open in IMG/M
3300012915	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S103-311B-2	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300013100	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG	Host-Associated	Open in IMG/M
3300013104	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG	Host-Associated	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300019356	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)	Environmental	Open in IMG/M
3300019361	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)	Environmental	Open in IMG/M
3300019362	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1 (version 2)	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022883	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S066-202C-4	Environmental	Open in IMG/M
3300023067	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S221-509R-5	Environmental	Open in IMG/M
3300025885	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025905	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025923	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025981	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027717	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Endophyte Co-N S PM (SPAdes)	Host-Associated	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031858	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D2	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031913	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D4	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032179	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D2	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M
3300034663	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20R1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GPIPI_03387100	2088090014	Soil	LELRVEDHQIIVNLIDSRLTITYQVSSEGLLEENKFWTLDGGDAEFRQRAWQAAHSKACQLAWIPRLKSVA
GPIPI_03938160	2088090014	Soil	MRELALHVEDHQIIVNLIDTRLTMTYQLSPGGQLEENEFWTVDGGDTDFRQRARQAALSKARQLAWIPRLRRVA
GPICI_02409540	2088090015	Soil	MRELEIHIEDRQIVVNLSDSRLTMTYQLSPDGQLKENEFWTVDGGDTEFRQRARQAAFSKARQLAWIPRLKSVA
4ZMR_04842040	2170459017	Switchgrass, Maize And Mischanthus Litter	MRELALHVEDHQIIVNLIDTRLTMTYQLSPDGQLEENKFWTVDGGDPEFRQRARQAAFSTARQLAWIPRLKSVA
INPgaii200_11789622	2228664022	Soil	ELEIHXEDXQIVVNLSDSRLTMTYQLSPDGQLKENEFWTVDGGDTEFRQRARQAAFSKARQLAWIPRLKSVA
JGI11643J12802_102041692	3300000890	Soil	LELRVEDHQIIVNLIDSRLTITYQVSSEGLLEENKFWTLDGGDAEFRQRAWQAAHSKACQLAWIPRLKSVA*
JGI11643J12802_119851002	3300000890	Soil	GGQIIVNMNDSRLTMTYQLSSEGQLEENKFWTLDGGDAEFRQRARQAAHSKARQLGWIGLKRVA*
JGI11615J12901_113741062	3300000953	Soil	GESLIRELELRVEDHQIIVNLIDSRLTITYQVSSEGLLEENKFWTLDGGDAEFRQRAWQAAHSKACQLAWIPRLKSVA*
JGI1027J12803_1039131781	3300000955	Soil	IIVCMVNSRLTLTFQLSTDGRLEENKFWTLDGGDADFRRRACQAAQSKASELAWIPRLKSVA*
JGI1027J12803_1072162652	3300000955	Soil	MRELQLHVEGREIIVKVRHTQLTITYRVSSDGRLEENRFWTVDAGDTEFRQRAWKAARAKARELAWIRPLRIVARGIA*
JGI10216J12902_1039633853	3300000956	Soil	MRELELRVEDHQITVNMIDTKLSITYQLSPEGHLEENTFWTLDGGDAEFRERSWQAAHSKARQLAWIPRLKSVA*
JGI10216J12902_1046400854	3300000956	Soil	MRELQLHVEGREIIVNVRHTRLTITYRVSSDGRLEENRFWTVDAGDTEFRQRAWKAARAKARELAWIPPLRTVA*
F14TB_1000506602	3300001431	Soil	MRELALHVEGGQIIVNMNDSRLTMTYQLSSEGQLEENKFWTLDGGDAEFRQRARPAAHSKARQLGWIGLKRVA*
Ga0062593_1003402302	3300004114	Soil	MRELVLHVENHQIIVNLIDTRLTMTYQLSPDGQLEENEFWTVDGGDTEFRQRAQQAAFSQARQLAWIPRLKSVA*
Ga0062593_1004318261	3300004114	Soil	EGATMRELELHVEGHQIIVCMVNSRLTLTFQLSTDGRLEENKFWTLDGGDADFRRRACQAAQSKASELAWIPRLKSVA*
Ga0062593_1005491721	3300004114	Soil	MRELQLHVEGREIIVKVRHTQLTITYRVSSDGRLEENRFWTVDAGDTEFRQRAWKAARAKARELAWIRPLRIVA*
Ga0062593_1011001642	3300004114	Soil	MRELEIHIEDRQIVVNLSDSRLTMTFQLSPDGQLKENEFWTVDGGDTEFRQRARQAAFSKARQLAWIPRLKSVA*
Ga0062589_1000467443	3300004156	Soil	MRELELHVEGHQIIVCMVNSRLTLTFQLSTDGRLEENKFWTLDGGDADFRRRACQAAQSKASELAWIPRLKSVA*
Ga0062589_1004298341	3300004156	Soil	MRELALHVEDHQIIVNLINTRLTMTCQLSPEGQLEENEFWTVDGGDMEFRQRAWQAALSKARQLAWIPRLRSVA*
Ga0062589_1015905941	3300004156	Soil	NLIDTRLTMTYQLSPDGQLEENEFWTVDGGDTEFRQRAQQAAFSQARQLAWIPRLKSVA*
Ga0063356_1009816793	3300004463	Arabidopsis Thaliana Rhizosphere	MRELELHVEGHQIIVCMANSRLTLTFQLSTDGRLEENKFWTLDGGDADFRRRACQAAQSKASELAWIPRLKSVA*
Ga0063356_1038523242	3300004463	Arabidopsis Thaliana Rhizosphere	MRELTLHVEGGQIIVNMNDSRLTMTYQLSSEGQLEENKFWTLDGGDAEFRQRARQTAHSKARQLGWIGLKRVA*
Ga0062592_1016583672	3300004480	Soil	MRSRVVWGKTMRGFQLHVEGREIIVNVRHTRLTITYRVSSDGRLEENRFWTVDAGDTEFRQRAWKAARAKARELAWIRPLRIVA*
Ga0066395_102490771	3300004633	Tropical Forest Soil	RVEDHQIIVSMIDTKLSITYQLSSEGHLEENKFWTLDGGDAEFRQRAWQAAHSKARQLAWIPRLKSVA*
Ga0070690_1017969941	3300005330	Switchgrass Rhizosphere	GRGLLFRENLVRGRPMRELALHVEDHQIIVNLINTRLTMTCQLSPEGQLEENEFWTVDGGDMEFRQRAWQAALSKARQLAWIPRLRRVA*
Ga0066388_1009331823	3300005332	Tropical Forest Soil	MRELELHVEDHQIIVNMIDTRLTITYQLSSEGLLEENKFWTLDGGDAEFRQRAWQAAHSKARQLAWIPRLKSVA*
Ga0066388_1019546991	3300005332	Tropical Forest Soil	FGCELLGVTTMRELELRVEDHQIIVNMIDTNLSITYQLSSEGHLEENKFWTLDGGDAEFRRRAWQAAHSKARQLAWIPRLKSVA*
Ga0066388_1025189962	3300005332	Tropical Forest Soil	MRELELHVEGRQIIVNMMDTRLSITYRLSPKGELEENKFWTMDAGDAEFRQRAWQAASSKARQLGWTHTLKCVA*
Ga0066388_1026263662	3300005332	Tropical Forest Soil	MRELALHVEDHQIIVNLIDTRFTITYQLSPTGQLEENEFWTVVGSDMEFRQRARQAALSKARQLGWLPRLKIVA*
Ga0066388_1035371952	3300005332	Tropical Forest Soil	MRELALHVEGHQIIVNLIDTRLTITYQVSSAGQLEENTFWTVDAGDIEFRQRAREAAQTKARQLAWIYPFKIVA*
Ga0066388_1037510121	3300005332	Tropical Forest Soil	HQITVNMIDTKLSITYQLSPEGHLEENTFWTLDGGDAEFRQRAWQAAHSKARQLAWIPRLKSVA*
Ga0066388_1045070461	3300005332	Tropical Forest Soil	MRELALHVEDHQIIVNLIDTRLTITYQLSPEGQLEENKFWTVDGGDPEFRQRARQAAFSTARQLAWIP
Ga0066388_1049113701	3300005332	Tropical Forest Soil	MRELALHVEDHQIIVNLINTRLTMTYQLSPGGQLEENEFWTVDGGDTDFRQRARQAALLKARQLAWIPHLRSVA*
Ga0066388_1059289821	3300005332	Tropical Forest Soil	MRELDLRVEDHQIVVNMIDTRLSITYQLSSEGLLEENKFWTLDGGDSEFRQRAWQAAYSKARQLAWIPRLKSVA*
Ga0066388_1077320641	3300005332	Tropical Forest Soil	MRELALHVEDHQIIVNLIDTRLTVTYQLSPEGQLEENKFWTVDGGDPEFRQRARQAAFSTARQ
Ga0068869_1002857351	3300005334	Miscanthus Rhizosphere	MRELVLHVENHQIIVNLIDTRLTMTYQLSPDGQLEENEFWTVDGGDMEFRQRAWQAALSKARQLAWIPRLRSVA*
Ga0068868_1000856891	3300005338	Miscanthus Rhizosphere	MRELALHVEDHQIIVNLIDTRLTMTYQLSPGGQLEENEFWTVDGGDTDFRQRARQAALSKARQLAWIPRLRSVA*
Ga0070692_106480821	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	HVEDHQIIVNLIDTRLTMTYQLSPGGQLEENEFWTVDGGDTDFRQRARQAALSKARQLAWIPRLRRVA*
Ga0008090_145457931	3300005363	Tropical Rainforest Soil	MRELELRVEDHQITVNMIDTKLSITYQLSPEGRLEENTFWTLDGGDAEFRQRAWQAAHSKARQLAWIPRLKSVA*
Ga0070703_101032512	3300005406	Corn, Switchgrass And Miscanthus Rhizosphere	WGWPMRELALHVEDHQIIVNLIDTRLTMTYQLSPGGQLEENEFWTVDGGDTDFRQRARQAALSKARQLAWIPRLRRVA*
Ga0070709_100402844	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MRELALHVEDHQIIVNLIDTRLTMTYQLSPGGQLEENEFWTVDGGDTDFRQRARQAALSKARQLAWIPRLRRVA*
Ga0070714_1014905901	3300005435	Agricultural Soil	MRELELRVEDHQITVNMIDTKLSITYQLSPEGHLEENTFWTLDGGDAEFRQRAWQAAHSKARHLAWIPRLKSVA*
Ga0070713_1011287311	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	AFGYELLGVTTMRELELRVEDHQITVNMIDTKLSITYQLSPEGHLEENTFWTLDGGDAEFRQRAWQAAHSKARQLAWIPRLKSVA*
Ga0070706_1020886641	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	VNLIDTRLTMTYQLSPGGQLEENEFWTVDGGDTDFRQRARQAALSKARQLAWIPRLRRVA
Ga0070697_1002004262	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	PMRELALHVEDHQIIVNLIDTRLTMTYQLSPGGQLEENEFWTVDGGDTDFRQRARQAALSKARQLAWIPRLRRVA*
Ga0070696_1016061921	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	RGWPMRELALHVEDHQIIVNLIDTRLTMTYQLSPEGQLEENKFWTVDGGDPEFRQRARQAAFSTARQLAWIPRLKSVA*
Ga0068854_1000993655	3300005578	Corn Rhizosphere	MRELALHVEDHQIIVNLIDTRLTMTYQLSPGGQLEENEFWTVDGGDTDFRQRARQAALSKARQLAWIPRLR
Ga0066905_1003997842	3300005713	Tropical Forest Soil	MRELALHVEDHQIIVNLINTRLTMTYQLSPGGQLEENEFWTVDGGDTDFRQRARQAALSKARQLAWIPRLRR
Ga0066903_1000774633	3300005764	Tropical Forest Soil	MRELELRVEDHQIIVNMIDTRLSITFQLSSEGLLEENKFWTVDGGDAEFRQRAWQAAHSTAFQLAWIPRLKSVA*
Ga0066903_1004455034	3300005764	Tropical Forest Soil	MRELALHVEDHQIIVNLIDTRLTITYQLSPEGQLEENKFWTVDGGDPEFRQRARQAAFSTARQLAWIPRLKSVA*
Ga0066903_1005538531	3300005764	Tropical Forest Soil	MRELALHVEGHQIIVNLIDTRLTITYQVSSAGQLEGNTFWTVDAGDIEFRQRAREAAQTKARQLAWIYPFKIVA*
Ga0066903_1007031432	3300005764	Tropical Forest Soil	VTTMRELELRVEDHQIIVNMIDTKLSIIYQLSSEGHLEENKFWTLDGGDAEFRQRAWQAAHSKARQLAWIPRLKSVA*
Ga0066903_1020300602	3300005764	Tropical Forest Soil	MRELALHVEGRQIIVNLIDTRLSITYQLSSDGTLEENTFWTVDAGDVEFRQRAGQAAHTKARQLAWIYPFKIVA*
Ga0066903_1021210433	3300005764	Tropical Forest Soil	MRELELRVENHQIIVNMIDTKLSITYALSSEGHLEENKFWTLDGGDAAFRRRAWQAAHSKARQLAWIPRLKSVA*
Ga0066903_1025297191	3300005764	Tropical Forest Soil	MRELELRVEDHQIIVNMIDTQLSITYQLSSEGRLEENKFWTLDGGDAEFRQRAWQAAHSK
Ga0066903_1061410002	3300005764	Tropical Forest Soil	MRELELRVEDHQIIVSMIDTKLSITYQLSSEGHLEENKFWTLDGGDAEFRQRAWQAAHSKARQLAWIPRLKSVA*
Ga0066903_1087744721	3300005764	Tropical Forest Soil	VEDHQITVNMIDTKLSITYQLSSEGRLEENKFWTLDGGDEEFRQRAWQAAHSKARQLAWIPRLKSVA*
Ga0068860_1002254551	3300005843	Switchgrass Rhizosphere	MRELALHVEDHQIIVNLIDTRLTMTYQLSSAGQLEENEFWTVDGGDTDFRQRARQAALSKARQLAWIPRLRRVA*
Ga0068860_1009210241	3300005843	Switchgrass Rhizosphere	MRELALHVEDHQIIVNLIDTRLTMTYQLSPGGQLEENEFWTVDGGDTDFRQRARQAALSKARQLAW
Ga0075432_100082491	3300006058	Populus Rhizosphere	MRELALHVEDHQIIVNLIDTRLTMTYQLSPGGQLEENEFWTVDGGDTDFRQRARQAALSKARQLAWIPRLRKVA*
Ga0070715_100773751	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	LHVEDHQIIVNLINTRLTMTCQLSPEGQLEENEFWTVDGGDMEFRQRAWQAALSKARQLAWIPRLRSVA*
Ga0079221_104016881	3300006804	Agricultural Soil	MRELALHVEDHQIIVNLIDTRLTMTYQLSPGGQLEENEFWSVDGGDTDFRQRARQAALSKARQLAWIPRLRRVA*
Ga0075426_106387891	3300006903	Populus Rhizosphere	MRELELRVEDHQITVNMIDTKLSITYQLSPEGHLEENTFWTLDGGDAEFRERAWQAAHSKARQLAWIPRLKSVA*
Ga0075424_1022126011	3300006904	Populus Rhizosphere	TMRELELRVEDHQITVNMIDTKLSITYQLSPEGHLEENTFWTLDGGDAEFRERAWQAAHSKARQLAWIPRLKSVA*
Ga0079219_100663653	3300006954	Agricultural Soil	MRELALHVEDHQIIVNLIYTRLTMTYQLSPGGQLEENEFWTVDGGDTDFRQRARQAALSKARQLAWIPRLRRVA*
Ga0111538_101606822	3300009156	Populus Rhizosphere	MRELVLHVENHQIIVNLIDTRLTMTYQLSPDGQLEEHEFWTVEGGDTEFRQRAQQAAFSQARQLAWIPRLKSVA*
Ga0075423_122936102	3300009162	Populus Rhizosphere	LLAGASPFRENLVRGWPMRELVLHVENHQIIVNLIDTRLTMTYQLSPDGQLEENEFWTVDGGDTEFRQRAQQAAFSQARQLAWIPRLKSVA*
Ga0126374_110112292	3300009792	Tropical Forest Soil	CELLGVTTMRELELRVEDHQITVNMIDTKLSITYQLSPEGHLEENTFWTLDGGDAEFRERAWQAAHSKARQLAWIPRLKSVA*
Ga0126374_110843811	3300009792	Tropical Forest Soil	MRELALHVEDHQIIVNLIDTRLTMTYQLSPDGQLEENKFWTVDGGDPEFRQRARQAAFSTARQLAWIPRLKSVA*
Ga0126384_110042651	3300010046	Tropical Forest Soil	MRELALHVEDHQIIVNLIDTRLTMTYQLSPEGQLEENKFWTVDGGDPEFRQRARQAAFSTARQLAWIPRLKSVA*
Ga0126382_100093181	3300010047	Tropical Forest Soil	RAFSPYGVSNILRVEYHQIIVNMIDTKLSITYQLSSEGHLEENTFWTLDGGDAEFRERAWQAAHSKARQLAWIPRLKSVA*
Ga0126382_101427082	3300010047	Tropical Forest Soil	MRELELRVEDHQITVNMIDTKLSITYQLSPEGHLEENTFWTLDGGDAEFRQRAWQAAHSKARQLAWIPRLKSVA*
Ga0126370_101028041	3300010358	Tropical Forest Soil	ELELRVEDHQIIVSMIDTKLSITYQLSSEGHLEENKFWTLDGGDAEFRQRAWQAAHSKARQLAWIPRLKSVA*
Ga0126372_100680631	3300010360	Tropical Forest Soil	LELRVEDHQIIVNLIDTKLSITYQLSPEGHLEENTFWTLDGGDAEFRERAWQAAHSKARQLAWIPRLKSVA*
Ga0126378_101387084	3300010361	Tropical Forest Soil	MRELELRVEDHQITVNMIDTKLSITYQLSSEGHLEENKFWTLDGGDAEFRQKAWQAAHSKARQLAWIPRLKSVA*
Ga0126378_105647221	3300010361	Tropical Forest Soil	MRELELRVEDHQITVNMIDTKLSITYQLSPEGHLEVWTLDGGDAEFRERAWQAAHSKARQLAWIPRLKSVA*
Ga0126379_130087381	3300010366	Tropical Forest Soil	MRELALHVEGHQIIVNLIDTRLTITYQVSSAGQLEENTFWTVDAGDIEFRQRAREAAQTKARQLAWIYPFKMVA*
Ga0134125_102743503	3300010371	Terrestrial Soil	MRELALHVEDHQIIVNLINTRLTMTCQLSPEGQLEENEFWTVDGGDMEFRQRAWQAALSKARQLAWIPRLRRVA*
Ga0134125_120481012	3300010371	Terrestrial Soil	MRELTLHVEGGQIIVNMNGSRLTMTYRLSSEGQLEENKFWTLDGSDAEFRQRARQAAHSQARQLGWIGLKRVA*
Ga0126383_107100132	3300010398	Tropical Forest Soil	ELLGVTTMRELELRVEDHQITVNMIDTKLSITYQLSPEGHLEENTFWTLDGGDAEFRERAWQAAHSKARQLAWIPRLKSVA*
Ga0126383_126856121	3300010398	Tropical Forest Soil	MRELDLRVEDHQFVVNMINTRLSITYQLSSEGLLEENKFWTLDGGDSEFRQRAWQAAYSKARQLAWIPRLKVWLESGTNR*
Ga0126383_131540821	3300010398	Tropical Forest Soil	MRELELRVEDHQIIVNMIDTKLSIIYQLSSEGHLEENKFWTLDGGDAEFRQRAWQAAHSKARQLAWIPRLKSVA*
Ga0124844_10574642	3300010868	Tropical Forest Soil	MRELELRVEDHQITVNMIDTKLSITYQLSPEGHLEENTFWTLDGGDAEFRERAWQAAHSKARQLAWIPRLK
Ga0157342_10638561	3300012507	Arabidopsis Rhizosphere	HPSQLCACAIIVNLIDTRLTMTYQLSPGGQLEENEFWTLDGGDTDFRQRARAALSKARQLAWIPRLRRVA*
Ga0157296_100366522	3300012905	Soil	MRELALHVEDHQIIVNLINTRLTMTCQLSPEGQLEENEFWTVDGGDMEFRQRAWQAAMSKARQLAWIPRLRSVA*
Ga0157283_100017623	3300012907	Soil	MRELALHVEDHQIIVNLIDTRLTMTCQLSPGGQLEENEFWTVDGGDTDFRQRARQAALSKARQLAWIPRLRRVA*
Ga0157301_104112901	3300012911	Soil	MKEFEIHIEDRQIVVNLSDSRLTMTFQLSPDGQLKENEFWTVDGGDTEFRQRARQAAFSKARQLAWIPRLKSVA*
Ga0157306_104343301	3300012912	Soil	MRSRVVWGKTMRGFQLHVEGREIIVNVRHTRLTITYRVSSDGRLEENRFWTGDAGDTEFRQRAWKAARAKARELAWIRPLRIVA*
Ga0157302_100043941	3300012915	Soil	KSCARATMRELALHVEDHQIIVNLIDTRLTMTYQLSPGGQLEENEFWTVDGGDTDFRQRARQAALSKARQLAWIPRLRRVA*
Ga0126375_112394211	3300012948	Tropical Forest Soil	MRELALHVEDHQIIVNLIDTRLTMTYQLSPEGQLEENKFWTVDGGDPEFRQRARQAAFSTARQLAWI
Ga0157373_100432011	3300013100	Corn Rhizosphere	MQELALHVEDHQIIVNLIDTRLTMTYQLSPGGQLEENEFWTVDGGDTDFRQRARQAALSKARQLAWIPRLRRVA*
Ga0157370_100705583	3300013104	Corn Rhizosphere	MRELALHVEDHQIIVNLIDTRLAMTYQLSPGGQLEENEFWTVDGGDTDFRQRARQAALSKARQLAWIPRLRRVA*
Ga0157374_128807891	3300013296	Miscanthus Rhizosphere	GLLFRENLVRGRPMRELALHVEDHQIIVNLINTRLTMTCQLSPEGQLEENEFWTVDGGDMEFRQRAWQAALSKARQLARIPRLRSVA*
Ga0157372_119847601	3300013307	Corn Rhizosphere	MRELALHVEDHQIIVNLINTRLTMTCQLSPEGQLEETEFWTVDGGDMEFRQRAWQAALSKARQLAWIPRLRSVA*
Ga0132256_1002312611	3300015372	Arabidopsis Rhizosphere	MRELALHVEDHQIIVNLIDTRLTMTYQLSPGGQLEENEFWTVDGGDTDFRQRARQAALSKARQLAWIPV*
Ga0182041_102626752	3300016294	Soil	TVNMIDTKLSITYQLSPEGHLEENTFWTLDGGDAGFRQRAWQAAHSKARQLAWIPRLKSVASERPDFHSAL
Ga0182041_104543112	3300016294	Soil	MRELELHVESRQIIVKMMDTRLSITYRLSPNGELEENKFWTMDGGDAEFRQRAWQAARSKACQLGWTHSLKCVA
Ga0182035_120088751	3300016341	Soil	MRELALHVEDHQIIVNLIDARLTMTYQLSPDGQLEENKFWTVDGGDPEFRQRARQAAFSTARQLAWIPRLKSVA
Ga0182032_107042442	3300016357	Soil	MRELELRVEDHQIIVNMIDTKLSITYQLSSEGRLEENKFWTLDGGDAEFRQRAWQAAHSKARQLAWIPRL
Ga0182032_118899261	3300016357	Soil	MREFELRVEDHQIVVNMIDTNLSITYQLSPEGHLEENTFWTLDGGDAEFRQRAWQAAHSKARQLAWIP
Ga0182037_107952061	3300016404	Soil	MRELETRVEEHQIIVNMIDTKLSITYQLSSEGHLEENKFWTLDGGDAEFRQRAWQAAHSKARQLAWIPRLKSVA
Ga0182037_110601332	3300016404	Soil	RNFAFGCELLGVTTMRELELRVEDHQIVVNMIDTKLSITYQLSPEGRLEENKFWTLDGGDAEFRQRAWQAAHSKARQLAWIPRLKSVA
Ga0182037_120487591	3300016404	Soil	MRELELRVEDHQITVNMIDTKLSITYQLSSEGRLEENKFWTLDGGDAEFRQRAWQAAHSEARQLAWIPRLKSVA
Ga0182039_109522371	3300016422	Soil	MRELELRVEDHQITVNMIDTKLSITYQLSSEGRLEENKFWTLDGGDAEFRQRAWQAAHSKARQLAWIPRLKS
Ga0182038_102129192	3300016445	Soil	MRELELHVESHQIIVNMMDTQLSITYRLSPNGELEENKFWTMDGGDAEFRQRAWQAARSKACQLGWTHSLKCVA
Ga0173481_100109774	3300019356	Soil	MRELELHVEGHQIIVCMVNSRLTLTFQLSTDGRLEENKFWTLDGGDADFRRRACQAAQSKASELAWIPRLKSVA
Ga0173482_101311053	3300019361	Soil	MRELQLHVEGREIIVKVRHTRLTITYRVSSDGRLEENRFWTVDAGDTEFRQRAWKAARAKAR
Ga0173479_104156792	3300019362	Soil	PMRELALHVEDHQIIVNLINTRLTMTCQLSPEGQLEENEFWTVDGGDMEFRQRAWQAALSKARQLAWIPRLRSVA
Ga0126371_104527363	3300021560	Tropical Forest Soil	FGCELLGVTTMRELELRVEDHQITVNMIDTKLSITYQLSPEGHLEENTFWTLDGGDAEFRERAWQAAHSKARQLAWIPRLKSVA
Ga0126371_122169482	3300021560	Tropical Forest Soil	GVRNFAFGCELLGVTTMRELEIRVEDHQIIVNMIDTKLSITYQLSSEGHLEENKFWTLDGGDAAFRRRAWQAAHSKARQLAWIPRLKSVA
Ga0126371_131751981	3300021560	Tropical Forest Soil	MRELELRVEDHQIIVNMIDTRLSITFQLSSEGLLEENKFWTVDGGDAEFRQRAWQAAHSTAFQLAWIPRLKSVA
Ga0247786_10119312	3300022883	Soil	MRELALHVEDHQIIVNLINTRLTMTCQLSPEGQLEENEFWTVDGGDMEFRQRAWQAALSKARQLAWIPRLRSVA
Ga0247743_10395231	3300023067	Soil	LSGASPFRENLVRGWPMRELVLHVENHQIIVNLIDTRLTMTYQLSPDGQLEENEFWTVDGGDTEFRQRAQQAAFSQARQLAWIPRLRRVA
Ga0207653_100100743	3300025885	Corn, Switchgrass And Miscanthus Rhizosphere	MRELALHVEDHQIIGNLIDTRLTMTYQLSPGGQLEENEFWTVDGGDTDFRQRARQAALSKARQLAWIPRLRRVA
Ga0207685_105559891	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	LHVEDHQIIVNLINTRLTMTCQLSPEGQLEENEFWTVDGGDMEFRQRAWQAALSKARQLAWIPRLRSVA
Ga0207684_116453942	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	IIVNLIDTRLTMTYQLSPGGQLEENEFWTVDGGDTDFRQRARQAALSKARQLAWIPRLRRVA
Ga0207681_105575253	3300025923	Switchgrass Rhizosphere	MRELALHVEDHQIIVNLIDTRLTMTYQLSPGGQLEENEFWTVDGGDTDFRQRARQAALSKARQLAWIPRLRR
Ga0207700_105734791	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	RVNAFGYELLGVTTMRELELRVEDHQITVNMIDTKLSITYQLSPEGHLEENTFWTLDGGDAEFRQRAWQAAHSKARQLAWIPRLKSVA
Ga0207640_114673101	3300025981	Corn Rhizosphere	ALHVEDHQIIVNLINTRLTMTCQLSPEGQLEENEFWTVDGGDMEFRQRAWQAALSKARQLAWIPRLRSVA
Ga0209998_101826921	3300027717	Arabidopsis Thaliana Rhizosphere	DRQIVVNLSDSRLTMTYQLSPDGQLKENEFWTVDGGDTEFRQRARQAAFSKARQLAWIPRLKSVA
Ga0209814_100153282	3300027873	Populus Rhizosphere	MRELALHVEDHQIIVNLIDTRLTMTYQLSPGGQLEENEFWSVDGGDTDFRQRARQAALSKARQLAWIPRLRRVA
Ga0318516_104433112	3300031543	Soil	MRELELRVEDHQIIVNMIDTKLSITYQLSSEGHLEENTFWTLDGGDAEFRQRAWLAAHSKARQLAWIPRLKSVA
Ga0310915_111820001	3300031573	Soil	MREFELRVEDHQIVVNMIDTNLSITYQLSPEGHLEENTFWTLDGGDAEFRQRAWQAAHSKARQLAW
Ga0310915_111884482	3300031573	Soil	MRELEIRVEDHQIIVDMLDTKLSITYQLSSEGHLEENKFRTLDGGDAEFRQRAWQAAHSKARQLAWIPRLKSVA
Ga0310813_108076371	3300031716	Soil	MRELALHVEDHQIIVNLIDTRLTMTYQLSPGGQLEENEFWTVDGGDTDFRQRARQAALSK
Ga0318500_102436021	3300031724	Soil	MRELEIRVEDHQIIVDMLDTKLSITYQLSSEGHLEENKFWTLDGGDAEFRQRAWQAAHSKARQLAWIPRLKSVA
Ga0318547_108006291	3300031781	Soil	MRELELHVESRQITVNMMDTRLSITYRLSPNGELEENKFWTMDGGDAEFRQRAWQAARSKARQLGWTHS
Ga0310917_100453552	3300031833	Soil	MRELELRVEDHQIIVNMIDTKLSITYQLSSEGHLEENKFWTLDGGDAEFRQRAWQAAHSKARQLAWIPRLKSVA
Ga0310892_110333501	3300031858	Soil	VLHVENHQIIVNLIDTRLTMTYQLSPDGQLEENEFWTVDGGDTEFRQRAQQAAFSQARQLAWIPRLKSVA
Ga0306925_102541894	3300031890	Soil	MRELELHVESRQITVNMMDTRLSITYRLSPNGELEENKFWTMDGGDAEFRQRAWQAARSKACQLGWTHSLKCVA
Ga0318520_102160891	3300031897	Soil	MRELELRVEDHQITVNMIDTKLSITYQLSSEGRLEENKFWTLDGGDAEFRQRAWQAAHSKARQLAWIPRLKSVA
Ga0306923_117320212	3300031910	Soil	MRELELHVESRQIIVKMMDTRLSITYRLSPNGELEENKFWTMDGGDAEFRQRAWQAARSKARQLGWTHSLKCVA
Ga0306923_121622471	3300031910	Soil	TTMREFELRVEDHQIVVNMIDTNLSITYQLSPEGHLEENTFWTLDGGDAEFRQRAWQAAHSKARQLAWIPRLKSVA
Ga0306921_125445192	3300031912	Soil	MRELELRVEDHQIVVNMIDTKLSITYQLSPEGRLEENKFWTLDGGDAEFRQRAWQAAHSKARQLAW
Ga0310891_101411232	3300031913	Soil	NLVRGWPMRELVLHVENHQIIVNLIDTRLTMTYQLSPGGQLEENEFWTVDGGDTDFRQRARQAALSKARQLAWIPRLRRVA
Ga0310912_107923222	3300031941	Soil	MTTMRELELRVENHQITVNMIDTKLSITYQLSPEGHLEENTFWTLDGGDAEFRQRAWQAAHSKARQLAWIPRLKSVA
Ga0310910_112307361	3300031946	Soil	MREFELRVEDHQIVVNMIDTNLSITYQLSPEGHLEENTFWTLDGGDAEFRQRAWLAAHSKARQLAWIPRLKSVA
Ga0306926_122389391	3300031954	Soil	MRELELRVENHQITVNMIDTKLSITYQLSPEGHLEENKFWTLDGGDAEFRQRAWQAAHSKARQLAWIPRLKSVA
Ga0318533_112626131	3300032059	Soil	RNFAFGCELLGVTTMRELELRVEDHQITVNMIDTKLSITYQLSSEGRLEENKFWTLDGGDAEFRQRAWQAAHSKARQLAWIPRLKSVA
Ga0306924_102683041	3300032076	Soil	MRELEIRVEDHQIIVDMLDTKLSITYQLSSEGHLEENKFWTLDGGDAEFRQRAWQAAHSKARQ
Ga0306924_102955661	3300032076	Soil	MRELELRVEDHQITVNMIDTNLSITYQLSSEGHLEENKFWTLDGGDAEFRWRVWQAAHSKARQLAWIPRLKSVA
Ga0306924_114944451	3300032076	Soil	MRELELRVEDHQIIVNMIDTKLSITYQLSSEGHLEENKFWTLDGGDAEFRQRAWQAAHSKARQLA
Ga0310889_102161522	3300032179	Soil	GDLMRELALHVEDHQIIVNLIDTRLTMTYQLSPGGQLEENEFWTVDGGDTDFRQRARQAALSKARQLAWIPRLRRVA
Ga0307472_1005054471	3300032205	Hardwood Forest Soil	MRELALHVEDHQIIVNLIDTRLTMTYQLSPGGQLEENEFWTVDGGDTDFRQRARQAALSKAR
Ga0306920_1028833773	3300032261	Soil	VEDHQIVVNMIDTNLSITYQLSPEGHLEENTFWTLDGGDAEFRQRAWLAAHSKARQLAWIPRLKSVA
Ga0310810_102062793	3300033412	Soil	MRELEIHIEDRQIVVNLSDSRLTMTFQLSPDGQLKENEFWTVDGGDTEFRQRARQAAFSKARQLAWIPRLKSVA
Ga0314784_058807_319_543	3300034663	Soil	MRELALHVEDHQIIVNLIDTRLTMTYQLSPDGQLEENEFWTVDGGDTEFRQRAQQAAFSQARQLAWIPRLKSVA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F049267

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences