Metagenome / Metatranscriptome Family F049453

Basic Information
Family ID	F049453
Family Type	Metagenome / Metatranscriptome
Number of Sequences	146
Average Sequence Length	37 residues
Representative Sequence	MRPKTPLAVENGVGKLAANLAPNASAGKREWRTPIP
Number of Associated Samples	115
Number of Associated Scaffolds	146

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	88.36 %
% of genes near scaffold ends (potentially truncated)	100.00 %
% of genes from short scaffolds (< 2000 bps)	99.32 %
Associated GOLD sequencing projects	115
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.19

Most Common Taxonomy
Group	Unclassified (96.575 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment (11.644 % of family members)
Environment Ontology (ENVO)	Unclassified (24.658 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (39.726 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Fibrous	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 10.94% β-sheet: 0.00% Coil/Unstructured: 89.06%
Feature Viewer

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Pfam ID	Name	% Frequency in 146 Family Scaffolds
PF01551	Peptidase_M23	0.68

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	96.58 %
All Organisms	root	All Organisms	3.42 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	96.58 %
cellular organisms	root	All Organisms → cellular organisms	3.42 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	96.58 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	3.42 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	96.58 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	2.05 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.68 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	96.58 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	2.05 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.68 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	96.58 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	1.37 %
Verrucomicrobiae	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae	0.68 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.68 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	96.58 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1.37 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.68 %
Verrucomicrobiales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	0.68 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	96.58 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1.37 %
Verrucomicrobia subdivision 3	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3	0.68 %
Intrasporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae	0.68 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	96.58 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1.37 %
unclassified Intrasporangiaceae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae → unclassified Intrasporangiaceae	0.68 %
Verrucomicrobia subdivision 3	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3	0.68 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	96.58 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1.37 %
Intrasporangiaceae bacterium URHB0013	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae → unclassified Intrasporangiaceae → Intrasporangiaceae bacterium URHB0013	0.68 %
Verrucomicrobia subdivision 3	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3	0.68 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.68 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2222084002\|DRAFT_c114800	Not Available	504	Open in IMG/M
3300004120\|Ga0058901_1018443	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae → unclassified Intrasporangiaceae → Intrasporangiaceae bacterium URHB0013	682	Open in IMG/M
3300006861\|Ga0063777_1013700	Not Available	523	Open in IMG/M
3300009235\|Ga0103857_10051854	Not Available	781	Open in IMG/M
3300009235\|Ga0103857_10065742	Not Available	705	Open in IMG/M
3300009235\|Ga0103857_10125632	Not Available	538	Open in IMG/M
3300009235\|Ga0103857_10129604	Not Available	531	Open in IMG/M
3300009239\|Ga0103858_10124479	Not Available	655	Open in IMG/M
3300009249\|Ga0103862_1022358	Not Available	810	Open in IMG/M
3300009252\|Ga0103863_10017964	Not Available	832	Open in IMG/M
3300009252\|Ga0103863_10033782	Not Available	670	Open in IMG/M
3300009579\|Ga0115599_1018602	Not Available	506	Open in IMG/M
3300009579\|Ga0115599_1109979	Not Available	798	Open in IMG/M
3300009579\|Ga0115599_1133869	Not Available	733	Open in IMG/M
3300009579\|Ga0115599_1164287	Not Available	801	Open in IMG/M
3300009580\|Ga0115596_1080358	Not Available	801	Open in IMG/M
3300009581\|Ga0115600_1125433	Not Available	765	Open in IMG/M
3300009581\|Ga0115600_1183296	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	810	Open in IMG/M
3300009582\|Ga0115601_1182338	Not Available	698	Open in IMG/M
3300009587\|Ga0115602_1024944	Not Available	808	Open in IMG/M
3300009587\|Ga0115602_1159262	Not Available	804	Open in IMG/M
3300009755\|Ga0115592_1170161	Not Available	547	Open in IMG/M
3300010081\|Ga0127457_1016184	Not Available	780	Open in IMG/M
3300010089\|Ga0127454_1108349	Not Available	727	Open in IMG/M
3300010095\|Ga0127475_1062819	Not Available	780	Open in IMG/M
3300010110\|Ga0126316_1029074	Not Available	802	Open in IMG/M
3300010119\|Ga0127452_1014225	Not Available	810	Open in IMG/M
3300010131\|Ga0115594_1186685	Not Available	793	Open in IMG/M
3300010136\|Ga0127447_1061305	Not Available	569	Open in IMG/M
3300010138\|Ga0115595_1070780	Not Available	909	Open in IMG/M
3300010138\|Ga0115595_1076704	Not Available	1516	Open in IMG/M
3300010143\|Ga0126322_1165800	Not Available	809	Open in IMG/M
3300010144\|Ga0115593_1089969	Not Available	808	Open in IMG/M
3300010144\|Ga0115593_1288177	Not Available	813	Open in IMG/M
3300010145\|Ga0126321_1313211	Not Available	602	Open in IMG/M
3300010307\|Ga0129319_1110737	Not Available	505	Open in IMG/M
3300010858\|Ga0126345_1123228	Not Available	795	Open in IMG/M
3300010862\|Ga0126348_1298270	Not Available	592	Open in IMG/M
3300011035\|Ga0138542_140791	Not Available	840	Open in IMG/M
3300011084\|Ga0138562_1070523	Not Available	819	Open in IMG/M
3300011090\|Ga0138579_1087464	Not Available	792	Open in IMG/M
3300011120\|Ga0150983_13348468	Not Available	753	Open in IMG/M
3300011305\|Ga0138532_1132991	Not Available	811	Open in IMG/M
3300011332\|Ga0126317_10136787	Not Available	803	Open in IMG/M
3300011340\|Ga0151652_12079089	Not Available	675	Open in IMG/M
3300011340\|Ga0151652_12874249	Not Available	750	Open in IMG/M
3300012212\|Ga0150985_109719013	Not Available	810	Open in IMG/M
3300012371\|Ga0134022_1104641	Not Available	813	Open in IMG/M
3300012372\|Ga0134037_1204086	Not Available	675	Open in IMG/M
3300012373\|Ga0134042_1149811	Not Available	814	Open in IMG/M
3300012376\|Ga0134032_1164977	Not Available	759	Open in IMG/M
3300012380\|Ga0134047_1155366	Not Available	768	Open in IMG/M
3300012388\|Ga0134031_1127466	Not Available	805	Open in IMG/M
3300012392\|Ga0134043_1301399	Not Available	817	Open in IMG/M
3300012396\|Ga0134057_1318098	Not Available	611	Open in IMG/M
3300012398\|Ga0134051_1345715	Not Available	798	Open in IMG/M
3300012400\|Ga0134048_1076423	Not Available	539	Open in IMG/M
3300012401\|Ga0134055_1305505	Not Available	713	Open in IMG/M
3300013078\|Ga0153914_1035376	Not Available	766	Open in IMG/M
3300014159\|Ga0181530_10044307	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3	2975	Open in IMG/M
3300016698\|Ga0181503_1230966	Not Available	655	Open in IMG/M
3300016700\|Ga0181513_1319020	Not Available	501	Open in IMG/M
3300016730\|Ga0181515_1452122	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	641	Open in IMG/M
3300019184\|Ga0184590_104122	Not Available	762	Open in IMG/M
3300019199\|Ga0187789_1035772	Not Available	550	Open in IMG/M
3300019199\|Ga0187789_1187279	Not Available	747	Open in IMG/M
3300019201\|Ga0180032_1079079	Not Available	679	Open in IMG/M
3300019211\|Ga0187799_1033916	Not Available	667	Open in IMG/M
3300019212\|Ga0180106_1052675	Not Available	685	Open in IMG/M
3300019212\|Ga0180106_1189333	Not Available	769	Open in IMG/M
3300019212\|Ga0180106_1232295	Not Available	686	Open in IMG/M
3300019232\|Ga0180114_1371988	Not Available	819	Open in IMG/M
3300019233\|Ga0184645_1112644	Not Available	794	Open in IMG/M
3300019233\|Ga0184645_1328308	Not Available	710	Open in IMG/M
3300019246\|Ga0172287_1015009	Not Available	817	Open in IMG/M
3300019250\|Ga0187790_1002146	Not Available	818	Open in IMG/M
3300019250\|Ga0187790_1035980	Not Available	807	Open in IMG/M
3300019250\|Ga0187790_1136510	Not Available	812	Open in IMG/M
3300019251\|Ga0187795_1373759	Not Available	801	Open in IMG/M
3300019254\|Ga0184641_1102621	Not Available	800	Open in IMG/M
3300019254\|Ga0184641_1148898	Not Available	683	Open in IMG/M
3300019254\|Ga0184641_1282263	Not Available	832	Open in IMG/M
3300019255\|Ga0184643_1238207	Not Available	715	Open in IMG/M
3300019259\|Ga0184646_1306304	Not Available	776	Open in IMG/M
3300019259\|Ga0184646_1541694	Not Available	811	Open in IMG/M
3300019264\|Ga0187796_1369066	Not Available	810	Open in IMG/M
3300019264\|Ga0187796_1572518	Not Available	675	Open in IMG/M
3300019265\|Ga0187792_1579016	Not Available	769	Open in IMG/M
3300019275\|Ga0187798_1639653	Not Available	806	Open in IMG/M
3300019275\|Ga0187798_1858108	Not Available	600	Open in IMG/M
3300020063\|Ga0180118_1262396	Not Available	592	Open in IMG/M
3300020064\|Ga0180107_1081307	Not Available	787	Open in IMG/M
3300020065\|Ga0180113_1075345	Not Available	799	Open in IMG/M
3300020610\|Ga0154015_1281783	Not Available	811	Open in IMG/M
3300021269\|Ga0210356_125944	Not Available	803	Open in IMG/M
3300021287\|Ga0210338_149493	Not Available	692	Open in IMG/M
3300021307\|Ga0179585_1046833	Not Available	714	Open in IMG/M
3300021853\|Ga0210323_1117087	Not Available	819	Open in IMG/M
3300021855\|Ga0213854_1191726	Not Available	800	Open in IMG/M
3300021861\|Ga0213853_10897773	Not Available	813	Open in IMG/M
3300021938\|Ga0213847_1024747	Not Available	796	Open in IMG/M
3300021947\|Ga0213856_1001285	Not Available	738	Open in IMG/M
3300021947\|Ga0213856_1059761	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	509	Open in IMG/M
3300021947\|Ga0213856_1267450	Not Available	739	Open in IMG/M
3300021951\|Ga0222624_1042036	Not Available	630	Open in IMG/M
3300022147\|Ga0213930_106850	Not Available	805	Open in IMG/M
3300022171\|Ga0213857_1047644	Not Available	541	Open in IMG/M
3300022195\|Ga0222625_1079594	Not Available	648	Open in IMG/M
3300022498\|Ga0242644_1011481	Not Available	801	Open in IMG/M
3300022499\|Ga0242641_1026451	Not Available	615	Open in IMG/M
3300022506\|Ga0242648_1023786	Not Available	805	Open in IMG/M
3300022506\|Ga0242648_1056034	Not Available	611	Open in IMG/M
3300022528\|Ga0242669_1036187	Not Available	794	Open in IMG/M
3300022529\|Ga0242668_1036913	Not Available	822	Open in IMG/M
3300022531\|Ga0242660_1044247	Not Available	949	Open in IMG/M
3300022708\|Ga0242670_1018754	Not Available	809	Open in IMG/M
3300022712\|Ga0242653_1030193	Not Available	808	Open in IMG/M
3300022724\|Ga0242665_10095871	Not Available	873	Open in IMG/M
3300022724\|Ga0242665_10122419	Not Available	795	Open in IMG/M
3300022726\|Ga0242654_10130908	Not Available	820	Open in IMG/M
3300022726\|Ga0242654_10137131	Not Available	805	Open in IMG/M
3300023697\|Ga0228706_1044352	Not Available	561	Open in IMG/M
3300023708\|Ga0228709_1055071	Not Available	810	Open in IMG/M
3300023708\|Ga0228709_1134627	Not Available	504	Open in IMG/M
3300026405\|Ga0256296_1035779	Not Available	603	Open in IMG/M
3300029652\|Ga0206099_106326	Not Available	810	Open in IMG/M
3300030586\|Ga0265393_1151560	Not Available	577	Open in IMG/M
3300030730\|Ga0307482_1121784	Not Available	735	Open in IMG/M
3300030761\|Ga0265722_101629	Not Available	801	Open in IMG/M
3300030764\|Ga0265720_1008026	Not Available	678	Open in IMG/M
3300030988\|Ga0308183_1056859	Not Available	800	Open in IMG/M
3300030989\|Ga0308196_1059299	Not Available	546	Open in IMG/M
3300031094\|Ga0308199_1064679	Not Available	744	Open in IMG/M
3300031097\|Ga0308188_1010645	Not Available	788	Open in IMG/M
3300031125\|Ga0308182_1010651	Not Available	704	Open in IMG/M
3300031423\|Ga0308177_1006612	Not Available	804	Open in IMG/M
3300031635\|Ga0310115_116986	Not Available	762	Open in IMG/M
3300031663\|Ga0307484_104829	Not Available	807	Open in IMG/M
3300031868\|Ga0316038_105727	Not Available	760	Open in IMG/M
3300033527\|Ga0316586_1041029	Not Available	813	Open in IMG/M
3300034643\|Ga0370545_038550	Not Available	889	Open in IMG/M
3300034643\|Ga0370545_058546	Not Available	766	Open in IMG/M
3300034659\|Ga0314780_055292	Not Available	806	Open in IMG/M
3300034659\|Ga0314780_055786	Not Available	804	Open in IMG/M
3300034671\|Ga0314796_163525	Not Available	528	Open in IMG/M
3300034673\|Ga0314798_046163	Not Available	803	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.63%
Host-Associated	Host-Associated	1.37%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	50.00%
Aquatic	Environmental → Aquatic	48.63%
Plants	Host-Associated → Plants	1.37%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	50.00%
Freshwater	Environmental → Aquatic → Freshwater	45.21%
Marine	Environmental → Aquatic → Marine	3.42%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.68%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.68%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	40.41%
Sediment	Environmental → Aquatic → Freshwater → Sediment	28.77%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	8.22%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified	5.48%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	4.79%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	2.74%
Creek	Environmental → Aquatic → Freshwater → Creek	2.74%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	2.74%
Loam	Environmental → Terrestrial → Soil → Loam	1.37%
River	Environmental → Aquatic → Freshwater → River	0.68%
Coastal	Environmental → Aquatic → Marine → Coastal	0.68%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.68%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.68%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	28.77%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	26.03%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	10.96%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	8.22%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified → Unclassified	5.48%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	2.74%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	2.74%
Unclassified	Environmental → Aquatic → Freshwater → Creek → Unclassified	2.74%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	2.74%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	2.74%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	1.37%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.37%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.68%
Unclassified	Environmental → Aquatic → Freshwater → River → Unclassified	0.68%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	0.68%
Desert	Environmental → Terrestrial → Soil → Unclassified → Desert	0.68%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.68%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.68%

Habitat	Taxonomy	Distribution
Wetland	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Wetland	11.64%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	11.64%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	10.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	9.59%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	8.90%
Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland	8.22%
River Water	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → River Water	5.48%
Watersheds	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Watersheds	4.79%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	3.42%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	2.74%
Freshwater	Environmental → Aquatic → Freshwater → Creek → Unclassified → Freshwater	2.74%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	2.74%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	2.74%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	2.05%
Wetland	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Wetland	1.37%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.37%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.37%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	1.37%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	0.68%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	0.68%
Freshwater	Environmental → Aquatic → Freshwater → River → Unclassified → Freshwater	0.68%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	0.68%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.68%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.68%
Soil	Environmental → Terrestrial → Soil → Unclassified → Desert → Soil	0.68%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.68%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.68%
Subtropical Soil	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Subtropical Soil	0.68%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2222084002	Subtropical soil microbial communities from Bundaberg Australia-sugarcane farm	Environmental	Open in IMG/M
3300004120	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF238 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006861	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 3 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300009235	Microbial communities of water from Amazon river, Brazil - RCM10	Environmental	Open in IMG/M
3300009239	Microbial communities of water from Amazon river, Brazil - RCM11	Environmental	Open in IMG/M
3300009249	Microbial communities of water from Amazon river, Brazil - RCM15	Environmental	Open in IMG/M
3300009252	Microbial communities of water from Amazon river, Brazil - RCM16	Environmental	Open in IMG/M
3300009579	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Plant_9_15_C (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300009580	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Mud_11_14_C (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300009581	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Mud_9_15_A (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300009582	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Mud_9_15_B (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300009587	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Mud_9_15_C (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300009755	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Plant_11_14_B (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010081	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_5_0_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010089	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_5_8_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010095	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_20_5_16_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010110	Soil microbial communities from Illinois, USA to study soil gas exchange rates - BV-IL-AGR metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010119	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_5_0_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010131	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Mud_11_14_A (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010136	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_2_24_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010138	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Mud_11_14_B (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010143	Soil microbial communities from Mekong Delta, Cambodia to study soil gas exchange rates - MK-CA-DRY metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010144	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Plant_11_14_C (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010145	Soil microbial communities from Hawaii, USA to study soil gas exchange rates - KP-HI-INT metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010307	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_0.1_0.8_RNA1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010858	Boreal forest soil eukaryotic communities from Alaska, USA - C3-2 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300010862	Boreal forest soil eukaryotic communities from Alaska, USA - C4-4 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300011035	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 23 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011084	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 47 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011090	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 69 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300011305	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 10 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011332	Soil microbial communities from California, USA to study soil gas exchange rates - SR-CA-SC2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300011340	Combined Assembly of Wetland Metatranscriptomes	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012371	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_2_0_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012372	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_5_0_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012373	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_0_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012376	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_5_0_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012380	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_0_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012388	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_2_24_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012392	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_4_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012396	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_0_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012398	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_24_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012400	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_4_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012401	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_16_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300013078	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 4 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300014159	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_60_metaG	Environmental	Open in IMG/M
3300016698	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_30_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300016700	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_30_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300016730	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_30_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019184	Soil microbial communities from Bohemian Forest, Czech Republic ? CSA2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019199	Metatranscriptome of tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019201	Estuarine microbial communities from the Columbia River estuary - R6.10AS metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019211	Metatranscriptome of tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_10_MT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019212	Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLIBT25_16_1Ra (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019232	Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLT530_16_1Ra (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019233	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019246	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Plant_deep_8_15_core_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019250	Metatranscriptome of tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019251	Metatranscriptome of tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_10_MT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019254	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019255	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019259	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019264	Metatranscriptome of tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019265	Metatranscriptome of tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP10_20_MT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019275	Metatranscriptome of tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_20_MT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300020063	Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLT730_16_1Ra (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300020064	Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLIBT27_16_1Ra (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300020065	Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLT499_16_1Ra (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300020610	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021269	Metatranscriptome of estuarine sediment microbial communities from the Columbia River estuary, Oregon, United States ? S.499 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021287	Metatranscriptome of estuarine sediment microbial communities from the Columbia River estuary, Washington, United States ? S.380 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021307	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_06_16RNAfungal (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021853	Metatranscriptome of estuarine sediment microbial communities from the Columbia River estuary, Oregon, United States ? S.189 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021855	Metatranscriptome of freshwater sediment microbial communities from pre-fracked creek in Pennsylvania, United States - G-2016_18 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021861	Metatranscriptome of freshwater sediment microbial communities from post-fracked creek in Pennsylvania, United States - ABR_2016 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021938	Metatranscriptome of freshwater microbial communities from pre-fracked creek in Pennsylvania, United States - EE:C (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021947	Metatranscriptome of freshwater sediment microbial communities from post-fracked creek in Pennsylvania, United States - G-2016_32 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021951	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022147	Metatranscriptome of freshwater microbial communities from McNutts Creek, Athens, Georgia, United States - 2-17 MT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022171	Metatranscriptome of freshwater sediment microbial communities from pre-fracked creek in Pennsylvania, United States - G-2016_45 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022195	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022498	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-32-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022499	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-14-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022506	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-26-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022528	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022529	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022531	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-28-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022708	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022712	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-32-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022724	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-17-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022726	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300023697	Metatranscriptome of freshwater microbial communities from McNutts Creek, Athens, Georgia, United States - 3-17_Aug_MT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300023708	Metatranscriptome of freshwater microbial communities from McNutts Creek, Athens, Georgia, United States - 29-17_Aug_MT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300026405	Metatranscriptome of freshwater microbial communities from Columbia River, Oregon, United States - Colum_Cont_RepA_0h (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300029652	Metatranscriptome of soil microbial communities from Anza Borrego desert, Southern California, United States - S3_20-13C (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030586	Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO144-ARE041SO (Eukaryote Community Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300030730	Metatranscriptome of hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030761	Metatranscriptome of plant litter microbial communities from Maridalen valley, Oslo, Norway - NLI4 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030764	Metatranscriptome of plant litter microbial communities from Maridalen valley, Oslo, Norway - NLI1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030988	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_157 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030989	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_197 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031094	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_203 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031097	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_183 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031125	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_153 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031423	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_148 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031635	Metatranscriptome of spruce roots microbial communities from Maridalen valley, Oslo, Norway - NRA1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031663	Metatranscriptome of hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031868	Spruce litter microbial communities from Bohemian Forest, Czech Republic ? CLA1 metaT (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300033527	Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300034643	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_120 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034659	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60R1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034671	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24R1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034673	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24R3 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
DRAFT_00051610	2222084002	Subtropical Soil	MRPGTPLAVENGVGKLAANLAPNASAGKREWRTPIP
Ga0058901_10184431	3300004120	Forest Soil	MPDGPATRPITPLAVENSVGNPAAPEKGAPNAGPGKRAWRTP
Ga0063777_10137001	3300006861	Peatlands Soil	MRPMTPLAVENGVGKLAAPARVAPNASPGKREWRTP
Ga0103857_100518541	3300009235	River Water	MRPKTPLAVENGVGELAAHWAPNASAGKRAWRTPIPHLFP
Ga0103857_100657421	3300009235	River Water	MRPKTPLAVENGVGKLAANLAPNVSAGKREWRTPIPHLVPVRSQD
Ga0103857_101256321	3300009235	River Water	MRPVTPLAVENGVGKLAANLAPNASTGKRAWRTPIPQLAPVGPQGS
Ga0103857_101296041	3300009235	River Water	VPNGPAMRPITPLAVENGVGKLAAQEAPNASPGKRAWR
Ga0103858_101244792	3300009239	River Water	VPNGPAMRPKTPLAVENGVGKLAAQEAPNASPGKRAW
Ga0103862_10223581	3300009249	River Water	MRPETPLAVENGVGKLAANLAPNASAGKRVWRTPIPHFVPVEPC
Ga0103863_100179641	3300009252	River Water	MRPKTPLAVENGVGELAARWAPNASAGKRAWRTPIPHLFPARGCLTG
Ga0103863_100337821	3300009252	River Water	MRPGTPLAVENGVGKRAALEEAPNVRAGKRAWRTP
Ga0115599_10186021	3300009579	Wetland	MRPITPLAVENGVGKLAALKAPNASTGKRAWRTPTP
Ga0115599_11099792	3300009579	Wetland	MRPETPLAVENSVGKLAAKSAPNVSPGKRAWRTPIP
Ga0115599_11338691	3300009579	Wetland	MRPTTSLATENGVGKLAAHEAPNASPGKRAWRTPTPKFA
Ga0115599_11642871	3300009579	Wetland	MLNGPAMRPITSLVMKNSVGKLAAKAAPNASPGKREWRTPIP
Ga0115596_10803582	3300009580	Wetland	MRPQTPLAVENGVGKLAACMAPNVSPGKRAWRTPT
Ga0115600_11254331	3300009581	Wetland	MRPQTPLAVENGVGKLAACMAPNVSPGKRAWRTPTP
Ga0115600_11832962	3300009581	Wetland	MRPETPLAVENSVGKPAAPEAPNVGPGKREWRTPIP
Ga0115601_11823381	3300009582	Wetland	MRPATPLAVENSVGKLAAPLREAPNASPGKRAWRTPIPLLA
Ga0115602_10249442	3300009587	Wetland	MRPQTPLAVENGVGKLAACMAPNVSPGKRAWRTPTPS
Ga0115602_11592621	3300009587	Wetland	MRPTTPLAVENGVGKLAAHEAPNASPGKRAWRTPTP
Ga0115592_11701611	3300009755	Wetland	MRPTTPLAVENSVGKPAAYKAPNAGAGKRAWRTPIP
Ga0127457_10161842	3300010081	Grasslands Soil	VPHGPAMRPVTPLAVENGVGKLAANLAPNASMGKR
Ga0127454_11083491	3300010089	Grasslands Soil	MRPITPLAVENGVGKLAANWAPNVSTGKRAWRTPI
Ga0127475_10628191	3300010095	Grasslands Soil	MRPTTPLAVENGVGKLAANWAPNASTGKRAWRTPI
Ga0126316_10290741	3300010110	Soil	MRSRTPFAAENSVGKPAAYQAPNAGMGKREWRTPIP
Ga0127452_10142251	3300010119	Grasslands Soil	MRPATPLAVENGVGKLAATERCAPNVSAGKREWRTPIP
Ga0115594_11866851	3300010131	Wetland	MRPETPLAVENSVGKLAAKSAPNVSPGKRAWRTPI
Ga0127447_10613051	3300010136	Grasslands Soil	MRPTTPLAVENGVGKLAAHEAPNVSAGKRAWRTPIPH
Ga0115595_10707802	3300010138	Wetland	MRPETPLAVENSVGKLAAKSAPNVSPGKRAWRTPIPH
Ga0115595_10767041	3300010138	Wetland	MRPTTSLATENGVGKLAAHEAPNASPGKRAWRTPTPKFVP
Ga0126322_11658001	3300010143	Soil	MLNGPAMRPITSLVMKNSVGKLAAKAAPNASPGKREWRTPIPQVT
Ga0115593_10899691	3300010144	Wetland	MRPHTPLAVENSVGKLAAREAPNASPGKRAWRTPIP
Ga0115593_12881772	3300010144	Wetland	MRPETPLAVENSVGKLAAKSAPNVSPGKRAWRTPIPHLVP
Ga0126321_13132111	3300010145	Soil	MRPHTPLAVENSVGKLAANLAPNASMGKREWRTPI
Ga0129319_11107372	3300010307	Aqueous	MRPETPLAVENGVGKLAAPKKAPNASPGKRERRTP
Ga0126345_11232281	3300010858	Boreal Forest Soil	MRPMTPLAVENGVGKLAANLAPNASPGKRVWRAPIPH
Ga0126348_12982701	3300010862	Boreal Forest Soil	MRPATPLAVENGVGKLAANLAPNVSAGKRAWRTPIP
Ga0138542_1407912	3300011035	Peatlands Soil	MRPTTPLAVENGVGKLAANLAPNVSPGKREWRTPI
Ga0138562_10705231	3300011084	Peatlands Soil	MRPTTPLAVENGVGKLAAKLAPNVSPGKREWRTPIP
Ga0138579_10874643	3300011090	Peatlands Soil	MRPQTPLAVENGVGKLTAPEKGAPNVSTGKRDWRAPI
Ga0150983_133484681	3300011120	Forest Soil	MRPKTPLAVENGVGKLAANLAPNVSAGKREWRTPIPHLVP
Ga0138532_11329911	3300011305	Peatlands Soil	MRPTTPLAVENGVGKLAAKLAPNVSPGKREWRTPI
Ga0126317_101367871	3300011332	Soil	MTPLAVENSVGKPAAAERRAPNAGPGKRAWRTPSPNL
Ga0151652_120790892	3300011340	Wetland	MRPVTPLAVENGVGKLAALEAPNASPGKRAWRTPIP
Ga0151652_128742492	3300011340	Wetland	MRPMTPLAVENGVGKLAACMAPNVSPGKRAWRTPTPNF
Ga0150985_1097190131	3300012212	Avena Fatua Rhizosphere	MRPQTPLAVENGVGKLAANLAPNVSMGKRVWRTPIP
Ga0134022_11046411	3300012371	Grasslands Soil	MRPKRTPLAVENGVGKPAASVAPNVGMGKREWRTPIP
Ga0134037_12040861	3300012372	Grasslands Soil	MRPATPLAVENGVGKLAATERCAPNVSAGKREWRTP
Ga0134042_11498111	3300012373	Grasslands Soil	MRPQTPLAVENGVGKLAAFKAPNASAGKRAWRTPIP
Ga0134032_11649771	3300012376	Grasslands Soil	MRPTTPLAVENGVGKLAAHEAPNVSAGKREWRTPI
Ga0134047_11553661	3300012380	Grasslands Soil	MRPQTPLAVENGVGKLAANLAPNVSAGKREWRTPI
Ga0134031_11274661	3300012388	Grasslands Soil	MRPKRTPLAVENGVGKPAANVAPNVGMGKREWRTPIP
Ga0134043_13013991	3300012392	Grasslands Soil	MRPQTPLAVENGVGKLAANLAPNVSAGKRVWRTPIPQ
Ga0134057_13180981	3300012396	Grasslands Soil	MRPATPLAVENGVGKLAAAERRAPNVSAGKREWRTPIP
Ga0134051_13457152	3300012398	Grasslands Soil	MRPVTPLAVENGVGKLAAFNKAPNASAGKRVWRTPIP
Ga0134048_10764231	3300012400	Grasslands Soil	MRPKTPLAVENGVGKLAANVAPNVSEGKRAWRTPIP
Ga0134055_13055051	3300012401	Grasslands Soil	MRPKTPLAVENGVGKLAANLAPNVSTGKRVRRTPIP
Ga0153914_10353761	3300013078	Freshwater Wetlands	MLNGPAMRPITSLVMKNSVGKLAAKAAPNASPGKREW
Ga0181530_100443075	3300014159	Bog	MTPLAVENGVGKLAAPARVAPNASPGKREWRTPIPHLSLLD
Ga0181503_12309661	3300016698	Peatland	MTPLAVENGVGKLAAPARVAPNASPGKREWRTPIPHLSL
Ga0181513_13190201	3300016700	Peatland	LDGPATRPKTPLAVENGVGKLAAPARVAPNASPGKREWRVRRKPKGS
Ga0181515_14521222	3300016730	Peatland	MPAMTPLAVENGVGKLAAPARVAPNASPGKREWRTP
Ga0184590_1041221	3300019184	Soil	MRPTTPLAVENGVGKLPAHVAPNGSTGKREWRTPNP
Ga0187789_10357721	3300019199	Peatland	MRPTTPLAAENGVGKLAAQAAPNASPGKRAWRTPIPD
Ga0187789_11872791	3300019199	Peatland	MRPKTPLAVENSVGKLAAPGRVAPNASAGKREWRTP
Ga0180032_10790791	3300019201	Estuarine	MRPTTPLAVENGVGKLAAKLAPNVSAGKREWRTPIP
Ga0187799_10339161	3300019211	Peatland	MRPNTPLAVENSVGKLAAPARAAPNASPGKREWRTP
Ga0180106_10526751	3300019212	Groundwater Sediment	MRPVTPLAVENGVGKLAANLAPNASTGKRAWRTPIPNFVP
Ga0180106_11893331	3300019212	Groundwater Sediment	MRPMTPLAVENGVGKLAAPVAPNAGMGKREWRTPIP
Ga0180106_12322951	3300019212	Groundwater Sediment	MRPGTPLAVENGVGKLAANLAPNASAGKRAWRTPIP
Ga0180114_13719881	3300019232	Groundwater Sediment	MRPKTPLAVENGVGKLAAAERRAPNASAGKREWRTPIP
Ga0184645_11126441	3300019233	Groundwater Sediment	MRPRTPLAVENGVGKLAANLAPNVSAGKREWRTPIP
Ga0184645_13283081	3300019233	Groundwater Sediment	MRPRKTPLAVENGVGKLAANLAPNVSAGKREWRTP
Ga0172287_10150091	3300019246	Wetland	MTPLAVENGVGKLAANLAPNASMGKRAWRTPIPHLVP
Ga0187790_10021461	3300019250	Peatland	MRPTTPLAAENGVGKLAAQAAPNASPGKRAWRTPIPDL
Ga0187790_10359801	3300019250	Peatland	MRPMTPLAVENSVGKLAAPARVAPNASPGKREWRT
Ga0187790_11365101	3300019250	Peatland	MRPVTPLAVENSVGKLAAWEAPNASPGKRAWRTPIP
Ga0187795_13737591	3300019251	Peatland	MRPETPFAVENGVGKLAALKGAPNVSPGKREWRTPN
Ga0184641_11026211	3300019254	Groundwater Sediment	MRPMTPLAVENGVGKLAAPVAPNAGMGKREWRTPI
Ga0184641_11488981	3300019254	Groundwater Sediment	MRPKTPLAVENGVGKLAANLAPNVSAGKRAWRTPI
Ga0184641_12822631	3300019254	Groundwater Sediment	MRPHTPLAVENSVGKLAANLAPNASMGKREWRTPIPQFCPCFG
Ga0184643_12382071	3300019255	Groundwater Sediment	MRPLTPLAVENGVGKLAASKAPNARTGKREWRTPIP
Ga0184646_13063041	3300019259	Groundwater Sediment	MRPKTPLAVENGVGKTAASARGAPNVVTGKRDWRTPN
Ga0184646_15416941	3300019259	Groundwater Sediment	MRPHTPLAVENSVGKLAANLAPNASMGKREWRTPIPQFC
Ga0187796_13690661	3300019264	Peatland	MRPKTPLAVENSVGKLAAPARVAPNASPGKREWRTP
Ga0187796_15725181	3300019264	Peatland	MRPETPLAVENGVGKLAAIAAPNASAGKIAWRTPI
Ga0187792_15790161	3300019265	Peatland	MRPMTPLAVENSVGKLTALLVRAPNASPGKRAWRPP
Ga0187798_16396531	3300019275	Peatland	MRPQTPLAVENGVGKLAAPARVAPNASPGKREWRTP
Ga0187798_18581081	3300019275	Peatland	MRPMTPLAVENSVGKLAASSNVAPNASAGKRAWRTP
Ga0180118_12623961	3300020063	Groundwater Sediment	MTLLAVENGVGKLAAPEAPNASTGKREWRTPIPQFV
Ga0180107_10813071	3300020064	Groundwater Sediment	MRPETPLAVENGVGKLAAYTAPNARAGKREWRTPIPEF
Ga0180113_10753451	3300020065	Groundwater Sediment	MRPETPLAVENGVGKLAANLAPNASAGKRAWRTPIP
Ga0154015_12817832	3300020610	Corn, Switchgrass And Miscanthus Rhizosphere	MRPKTPLAVENGVGKLAANLAPNVSAGKREWRTPIPH
Ga0210356_1259442	3300021269	Estuarine	MRPQTPLAVENGVGKLAANLAPNVSAGKREWRTPIP
Ga0210338_1494931	3300021287	Estuarine	MRPETPLAVENSVGKLAAHAAPNASPGKRAWRTPIP
Ga0179585_10468331	3300021307	Vadose Zone Soil	MRPKTSLAVENGVGKLAANLAPNVSAGKREWRTPIP
Ga0210323_11170871	3300021853	Estuarine	MRPATPLAVENSVGKLAAPLREAPNASPGKRAWRTPIP
Ga0213854_11917262	3300021855	Watersheds	MRPKTPLAMENGVGKLAANLAPNVSAGKRAWRTPIP
Ga0213853_108977731	3300021861	Watersheds	MRPNTPLAVENGVGKLAAPSEAPNASPGKRVWRTPTP
Ga0213847_10247471	3300021938	Watersheds	MRPLTPLAVENGVGKLAAYTAPNVSVGKRAWRTPIP
Ga0213856_10012851	3300021947	Watersheds	MRPKTTPPAVENGVGKLAANLAPNVSAGKREWRTPI
Ga0213856_10597611	3300021947	Watersheds	MRPKTPLAVENGVGELAAHWAPNASAGKRAWRTPIPHLFPAR
Ga0213856_12674501	3300021947	Watersheds	MRPETPLAVENGVGKLAANLAPNVSAGKRAWRTPIPHLV
Ga0222624_10420361	3300021951	Groundwater Sediment	MRPVTPLAVENGVGKLAAYEAPNASAGKRVWRTPI
Ga0213930_1068501	3300022147	Freshwater	MRPETPLAVENGVGKLAANLAPNASPGKRAWRTPIP
Ga0213857_10476441	3300022171	Watersheds	MRPETPFAVENGVGKLAACKAPNASPGKRAWRTPTP
Ga0222625_10795941	3300022195	Groundwater Sediment	MRPKTPFALENGVGKLAAHGAPNVSPGKRAWRTPIP
Ga0242644_10114811	3300022498	Soil	MRPITPLAVENGVGKLAAKSAPNVSPGKREWRTPI
Ga0242641_10264511	3300022499	Soil	MRPTTPLAVENGVGKLAAKSAPNVSPGKREWRTPI
Ga0242648_10237861	3300022506	Soil	MRPETPLAVEIGVGKLSAYMAPNGSVGKRAWRTPTS
Ga0242648_10560341	3300022506	Soil	MRPKTSLAVENGVGKLAANLAPNASAGKREWRTPI
Ga0242669_10361871	3300022528	Soil	MTPLAVENSVGKLAAPQRVRLIASVGKRAWRTPIP
Ga0242668_10369131	3300022529	Soil	MRPITPLAVENGVGKLAANCAPNVSTGKREWRTPIPHLSP
Ga0242660_10442471	3300022531	Soil	MRPITPLAVENGVGKLAANCAPNVSTGKREWRTPIPQMKGN
Ga0242670_10187541	3300022708	Soil	MRPITPLAVENGVGKLAAKSAPNVSPGKREWRTPIP
Ga0242653_10301931	3300022712	Soil	MRPITPLAVENGVGKLAANCAPNVSTGKREWRTPIL
Ga0242665_100958711	3300022724	Soil	MRPITPLAVENGVGKLAANCAPNVSTGKREWRTPIPMPKA
Ga0242665_101224192	3300022724	Soil	MRPKTPLAVENGVGKLAANLAPNVSAGKREWRTPN
Ga0242654_101309082	3300022726	Soil	VENSVGKPAAPARGALNAGSGKREWRTPIPHLSLFD
Ga0242654_101371311	3300022726	Soil	MRPKTPLAVENGVGKLAANLAPNASAGKREWRTPIP
Ga0228706_10443521	3300023697	Freshwater	MRPTSPLAVENGVGKLAANLAPNASPGKRAWRTPIPKFCP
Ga0228709_10550711	3300023708	Freshwater	MRPITPLAVENGVGKLAAKLAPNVSAGKREWRTPIP
Ga0228709_11346271	3300023708	Freshwater	MRPETPRAVENSVGKLAAPRGEAPNASPGKRVWRTPIP
Ga0256296_10357791	3300026405	Freshwater	MRPETPLAVENGVGKLAANLAPNVSAGKREWRTPIP
Ga0206099_1063261	3300029652	Soil	MRPKTPLAVENGVGELAAHEAPNVSAGKRAWRTPIPKFPRS
Ga0265393_11515601	3300030586	Soil	RTPLDVGKGVGKPAAPEKGAPNAGSGKREWRTPIPQN
Ga0307482_11217841	3300030730	Hardwood Forest Soil	MTPLAVENSVGKLAADEAPNASMGKRVWRTPIPQFVPA
Ga0265722_1016291	3300030761	Soil	MRPVIPLAVENGVGKLAANLAPNASPGKRVWRTPIP
Ga0265720_10080261	3300030764	Soil	MRPVTPLAVENGVGKLAANLAPNASPGKRVWRTPI
Ga0308183_10568591	3300030988	Soil	MRPVTPLAVENGVGKLAAILAPNASAGKRAWRTPIPDL
Ga0308196_10592991	3300030989	Soil	MRPKTPLAVENGVGKLAAILAPNVSAGKREWRTPIP
Ga0308199_10646791	3300031094	Soil	MRPVTPLAVENGVGKLAAYEAPNASAGKRVWRTPIPH
Ga0308188_10106451	3300031097	Soil	MRPRITPLAVENGVGKLAANLAPNVSAGKREWRTPIPIF
Ga0308182_10106511	3300031125	Soil	MRPTTPLAVENGVGKLAAHEAPNVSAGKREWRTPIP
Ga0308177_10066121	3300031423	Soil	MHDGPAARPNTPLAVENSVGKSAATERCAPNVGAGKREWRTPIP
Ga0310115_1169861	3300031635	Soil	MRPVTPLAVENGVGKLAANMAPNASPGKRVWRTPIP
Ga0307484_1048291	3300031663	Hardwood Forest Soil	MRPITPLAVENGVGKLTANCAPNVSTGKREWRTPIP
Ga0316038_1057271	3300031868	Soil	VENSVGKPAAPEKGAPNAGAGKREWRTPIPHLSLFD
Ga0316586_10410291	3300033527	Rhizosphere	MRPKTPVAAVNGVGKLAASLEAPNVSAGKRAWRTPIP
Ga0370545_038550_769_888	3300034643	Soil	MRPKTPLAVENGVGKLAANWAPNVSTGKRAWRTPIPHFVP
Ga0370545_058546_659_766	3300034643	Soil	MRPMTPLAVENGVGKLAAREAPNVSAGKRAWRTPIP
Ga0314780_055292_1_108	3300034659	Soil	MRPATPLAVENGVGKLAAHEAPNVSAGKREWRTPIP
Ga0314780_055786_699_803	3300034659	Soil	MRPMTPLAVENGVGKLAANLAPNVSAGKRAWRTPI
Ga0314796_163525_421_528	3300034671	Soil	MRPKTPLAVENGVGKLAANLAPNVSAGKRAWRTPIP
Ga0314798_046163_696_803	3300034673	Soil	MRPMTPLAVENGVGKLAANLAPNVSAGKRAWRTPIP

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.19
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.19
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F049453

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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