Metagenome / Metatranscriptome Family F049475

Basic Information
Family ID	F049475
Family Type	Metagenome / Metatranscriptome
Number of Sequences	146
Average Sequence Length	90 residues
Representative Sequence	MRWFFLAVGVLGWLLALGVVWIFAQSGGALTFIAAGVFATVAILALVGERIIKTLEEIRDGSVTRIRVNTPADRAVTERVVTEREAEQLAASR
Number of Associated Samples	112
Number of Associated Scaffolds	146

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	73.29 %
% of genes near scaffold ends (potentially truncated)	44.52 %
% of genes from short scaffolds (< 2000 bps)	82.88 %
Associated GOLD sequencing projects	101
AlphaFold2 3D model prediction	No

Most Common Taxonomy
Group	Bacteria (59.589 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere (13.014 % of family members)
Environment Ontology (ENVO)	Unclassified (37.671 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (52.055 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 73.12% β-sheet: 4.30% Coil/Unstructured: 22.58%
Feature Viewer

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Pfam ID	Name	% Frequency in 146 Family Scaffolds
PF00563	EAL	34.25
PF01799	Fer2_2	15.75
PF00111	Fer2	8.90
PF02738	MoCoBD_1	6.16
PF00990	GGDEF	5.48
PF08448	PAS_4	2.05
PF04773	FecR	1.37
PF13426	PAS_9	1.37
PF13188	PAS_8	0.68
PF01494	FAD_binding_3	0.68
PF08546	ApbA_C	0.68
PF13450	NAD_binding_8	0.68
PF00440	TetR_N	0.68

COG ID	Name	Functional Category	% Frequency in 146 Family Scaffolds
COG2200	EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant)	Signal transduction mechanisms [T]	34.25
COG3434	c-di-GMP phosphodiesterase YuxH/PdeH, contains EAL and HDOD domains	Signal transduction mechanisms [T]	34.25
COG4943	Redox-sensing c-di-GMP phosphodiesterase, contains CSS-motif and EAL domains	Signal transduction mechanisms [T]	34.25
COG5001	Cyclic di-GMP metabolism protein, combines GGDEF and EAL domains with a 6TM membrane domain	Signal transduction mechanisms [T]	34.25
COG0654	2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases	Energy production and conversion [C]	1.37
COG0578	Glycerol-3-phosphate dehydrogenase	Energy production and conversion [C]	0.68
COG0644	Dehydrogenase (flavoprotein)	Energy production and conversion [C]	0.68
COG0665	Glycine/D-amino acid oxidase (deaminating)	Amino acid transport and metabolism [E]	0.68
COG1893	Ketopantoate reductase	Coenzyme transport and metabolism [H]	0.68

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	59.59 %
Unclassified	root	N/A	40.41 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	59.59 %
Unclassified	root	N/A	40.41 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	59.59 %
Unclassified	root	N/A	40.41 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.41 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	19.18 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.41 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	15.07 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.41 %
Nevskiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales	8.90 %
Oceanospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Oceanospirillales	2.05 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.41 %
Steroidobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae	8.90 %
Oceanospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Oceanospirillales → Oceanospirillaceae	2.05 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.41 %
Povalibacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Povalibacter	8.90 %
Marinobacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Oceanospirillales → Oceanospirillaceae → Marinobacterium	2.05 %
Paraburkholderia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.41 %
Povalibacter uvarum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Povalibacter → Povalibacter uvarum	8.90 %
Marinobacterium jannaschii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Oceanospirillales → Oceanospirillaceae → Marinobacterium → Marinobacterium jannaschii	2.05 %
Paraburkholderia piptadeniae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia → Paraburkholderia piptadeniae	0.68 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2088090015\|GPICI_8762833	All Organisms → cellular organisms → Bacteria	6957	Open in IMG/M
2088090015\|GPICI_8842038	Not Available	3011	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_105330692	Not Available	543	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_105336404	Not Available	549	Open in IMG/M
3300000890\|JGI11643J12802_11096615	All Organisms → cellular organisms → Bacteria	1061	Open in IMG/M
3300003267\|soilL1_10022344	All Organisms → cellular organisms → Bacteria	2634	Open in IMG/M
3300003319\|soilL2_10258110	Not Available	1685	Open in IMG/M
3300004114\|Ga0062593_100378075	All Organisms → cellular organisms → Bacteria	1254	Open in IMG/M
3300004114\|Ga0062593_100654231	All Organisms → cellular organisms → Bacteria	1015	Open in IMG/M
3300004156\|Ga0062589_100292004	All Organisms → cellular organisms → Bacteria	1254	Open in IMG/M
3300004463\|Ga0063356_100118161	All Organisms → cellular organisms → Bacteria	2933	Open in IMG/M
3300004463\|Ga0063356_100138215	All Organisms → cellular organisms → Bacteria	2747	Open in IMG/M
3300004480\|Ga0062592_101180959	All Organisms → cellular organisms → Bacteria	714	Open in IMG/M
3300005331\|Ga0070670_100221296	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1647	Open in IMG/M
3300005333\|Ga0070677_10247758	All Organisms → cellular organisms → Bacteria	883	Open in IMG/M
3300005336\|Ga0070680_101211511	All Organisms → cellular organisms → Bacteria	653	Open in IMG/M
3300005336\|Ga0070680_101844648	Not Available	524	Open in IMG/M
3300005338\|Ga0068868_101865341	All Organisms → cellular organisms → Bacteria → Proteobacteria	569	Open in IMG/M
3300005345\|Ga0070692_10295028	All Organisms → cellular organisms → Bacteria	988	Open in IMG/M
3300005440\|Ga0070705_100372734	All Organisms → cellular organisms → Bacteria	1048	Open in IMG/M
3300005441\|Ga0070700_100041669	All Organisms → cellular organisms → Bacteria	2815	Open in IMG/M
3300005456\|Ga0070678_100489244	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1084	Open in IMG/M
3300005471\|Ga0070698_100554059	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1089	Open in IMG/M
3300005547\|Ga0070693_100943772	All Organisms → cellular organisms → Bacteria	649	Open in IMG/M
3300005564\|Ga0070664_100072231	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2959	Open in IMG/M
3300005577\|Ga0068857_101948615	Not Available	576	Open in IMG/M
3300005578\|Ga0068854_100392874	All Organisms → cellular organisms → Bacteria	1146	Open in IMG/M
3300005718\|Ga0068866_11457785	Not Available	502	Open in IMG/M
3300005843\|Ga0068860_101411364	Not Available	717	Open in IMG/M
3300006049\|Ga0075417_10035759	All Organisms → cellular organisms → Bacteria	2082	Open in IMG/M
3300006049\|Ga0075417_10473466	Not Available	627	Open in IMG/M
3300006844\|Ga0075428_100148238	All Organisms → cellular organisms → Bacteria	2550	Open in IMG/M
3300006844\|Ga0075428_100170948	All Organisms → cellular organisms → Bacteria	2356	Open in IMG/M
3300006845\|Ga0075421_100508054	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Povalibacter → Povalibacter uvarum	1431	Open in IMG/M
3300006846\|Ga0075430_100448595	Not Available	1065	Open in IMG/M
3300006846\|Ga0075430_100863430	Not Available	746	Open in IMG/M
3300006853\|Ga0075420_100419197	All Organisms → cellular organisms → Bacteria	1157	Open in IMG/M
3300006871\|Ga0075434_100282874	All Organisms → cellular organisms → Bacteria	1678	Open in IMG/M
3300006894\|Ga0079215_11663752	Not Available	509	Open in IMG/M
3300006904\|Ga0075424_101678839	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Oceanospirillales → Oceanospirillaceae → Marinobacterium → Marinobacterium jannaschii	673	Open in IMG/M
3300006904\|Ga0075424_102724595	Not Available	516	Open in IMG/M
3300007004\|Ga0079218_10370667	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia → Paraburkholderia piptadeniae	1204	Open in IMG/M
3300009011\|Ga0105251_10661947	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Povalibacter → Povalibacter uvarum	500	Open in IMG/M
3300009094\|Ga0111539_10024286	All Organisms → cellular organisms → Bacteria	7443	Open in IMG/M
3300009094\|Ga0111539_10033402	All Organisms → cellular organisms → Bacteria	6245	Open in IMG/M
3300009098\|Ga0105245_10818199	Not Available	970	Open in IMG/M
3300009101\|Ga0105247_10393282	All Organisms → cellular organisms → Bacteria	986	Open in IMG/M
3300009148\|Ga0105243_10655879	Not Available	1017	Open in IMG/M
3300009156\|Ga0111538_11504196	All Organisms → cellular organisms → Bacteria	849	Open in IMG/M
3300009553\|Ga0105249_10080910	Not Available	3019	Open in IMG/M
3300010145\|Ga0126321_1303015	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Oceanospirillales → Oceanospirillaceae → Marinobacterium → Marinobacterium jannaschii	624	Open in IMG/M
3300010362\|Ga0126377_12244729	All Organisms → cellular organisms → Bacteria	622	Open in IMG/M
3300010375\|Ga0105239_11861243	Not Available	698	Open in IMG/M
3300010401\|Ga0134121_10069020	All Organisms → cellular organisms → Bacteria	2921	Open in IMG/M
3300010401\|Ga0134121_10846805	Not Available	883	Open in IMG/M
3300011119\|Ga0105246_11269981	Not Available	681	Open in IMG/M
3300011332\|Ga0126317_10571584	All Organisms → cellular organisms → Bacteria	635	Open in IMG/M
3300011333\|Ga0127502_11054208	Not Available	620	Open in IMG/M
3300012212\|Ga0150985_118640679	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Povalibacter → Povalibacter uvarum	848	Open in IMG/M
3300012469\|Ga0150984_112367269	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Povalibacter → Povalibacter uvarum	980	Open in IMG/M
3300012907\|Ga0157283_10324917	Not Available	544	Open in IMG/M
3300014326\|Ga0157380_12836749	Not Available	551	Open in IMG/M
3300014745\|Ga0157377_10064213	All Organisms → cellular organisms → Bacteria	2105	Open in IMG/M
3300014745\|Ga0157377_10803349	Not Available	694	Open in IMG/M
3300014968\|Ga0157379_10187021	All Organisms → cellular organisms → Bacteria	1872	Open in IMG/M
3300015371\|Ga0132258_10001947	All Organisms → cellular organisms → Bacteria → Proteobacteria	37441	Open in IMG/M
3300015371\|Ga0132258_10056806	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	8996	Open in IMG/M
3300015372\|Ga0132256_102347704	Not Available	636	Open in IMG/M
3300015373\|Ga0132257_100444848	All Organisms → cellular organisms → Bacteria	1582	Open in IMG/M
3300015373\|Ga0132257_101586167	Not Available	837	Open in IMG/M
3300015374\|Ga0132255_101261816	Not Available	1114	Open in IMG/M
3300018066\|Ga0184617_1129217	All Organisms → cellular organisms → Bacteria	727	Open in IMG/M
3300018422\|Ga0190265_10224735	Not Available	1908	Open in IMG/M
3300018422\|Ga0190265_10315532	All Organisms → cellular organisms → Bacteria	1639	Open in IMG/M
3300018429\|Ga0190272_11718510	All Organisms → cellular organisms → Bacteria	650	Open in IMG/M
3300018465\|Ga0190269_11361030	Not Available	573	Open in IMG/M
3300018476\|Ga0190274_12819520	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Oceanospirillales → Oceanospirillaceae → Marinobacterium → Marinobacterium jannaschii	582	Open in IMG/M
3300019356\|Ga0173481_10295179	All Organisms → cellular organisms → Bacteria	751	Open in IMG/M
3300019361\|Ga0173482_10083552	All Organisms → cellular organisms → Bacteria	1123	Open in IMG/M
3300019362\|Ga0173479_10034241	All Organisms → cellular organisms → Bacteria	1563	Open in IMG/M
3300019377\|Ga0190264_10160261	Not Available	1176	Open in IMG/M
3300020202\|Ga0196964_10297474	Not Available	764	Open in IMG/M
3300022737\|Ga0247747_1030989	Not Available	622	Open in IMG/M
3300025893\|Ga0207682_10129085	All Organisms → cellular organisms → Bacteria	1127	Open in IMG/M
3300025899\|Ga0207642_10155817	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Povalibacter → Povalibacter uvarum	1221	Open in IMG/M
3300025908\|Ga0207643_10045806	All Organisms → cellular organisms → Bacteria	2471	Open in IMG/M
3300025921\|Ga0207652_11630356	Not Available	549	Open in IMG/M
3300025924\|Ga0207694_11777653	Not Available	518	Open in IMG/M
3300025927\|Ga0207687_11453672	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Povalibacter → Povalibacter uvarum	589	Open in IMG/M
3300025930\|Ga0207701_10308395	Not Available	1374	Open in IMG/M
3300025937\|Ga0207669_10471091	Not Available	999	Open in IMG/M
3300025961\|Ga0207712_10010192	All Organisms → cellular organisms → Bacteria → Proteobacteria	5961	Open in IMG/M
3300025961\|Ga0207712_11247504	Not Available	664	Open in IMG/M
3300026075\|Ga0207708_10023274	All Organisms → cellular organisms → Bacteria	4680	Open in IMG/M
3300026075\|Ga0207708_10260709	All Organisms → cellular organisms → Bacteria	1399	Open in IMG/M
3300026095\|Ga0207676_11742380	All Organisms → cellular organisms → Bacteria	621	Open in IMG/M
3300027873\|Ga0209814_10393629	Not Available	609	Open in IMG/M
3300027873\|Ga0209814_10439508	Not Available	575	Open in IMG/M
3300027886\|Ga0209486_10140423	All Organisms → cellular organisms → Bacteria	1322	Open in IMG/M
3300027886\|Ga0209486_10458105	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Povalibacter → Povalibacter uvarum	785	Open in IMG/M
3300027907\|Ga0207428_10060530	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	3000	Open in IMG/M
3300027909\|Ga0209382_10002497	All Organisms → cellular organisms → Bacteria → Proteobacteria	26656	Open in IMG/M
3300027909\|Ga0209382_11219286	All Organisms → cellular organisms → Bacteria	768	Open in IMG/M
3300028379\|Ga0268266_10476367	All Organisms → cellular organisms → Bacteria	1189	Open in IMG/M
3300030783\|Ga0102752_1599093	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Povalibacter → Povalibacter uvarum	521	Open in IMG/M
3300030783\|Ga0102752_1625082	All Organisms → cellular organisms → Bacteria	826	Open in IMG/M
3300030785\|Ga0102757_10212711	Not Available	517	Open in IMG/M
3300031039\|Ga0102760_10736590	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Povalibacter → Povalibacter uvarum	556	Open in IMG/M
3300031054\|Ga0102746_11050321	All Organisms → cellular organisms → Bacteria	793	Open in IMG/M
3300031054\|Ga0102746_11060279	All Organisms → cellular organisms → Bacteria	599	Open in IMG/M
3300031229\|Ga0299913_11491527	Not Available	630	Open in IMG/M
3300031538\|Ga0310888_10402084	Not Available	804	Open in IMG/M
3300031538\|Ga0310888_10897656	Not Available	553	Open in IMG/M
3300031548\|Ga0307408_100021338	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Povalibacter → Povalibacter uvarum	4383	Open in IMG/M
3300031548\|Ga0307408_100065910	All Organisms → cellular organisms → Bacteria → Proteobacteria	2658	Open in IMG/M
3300031548\|Ga0307408_100168974	All Organisms → cellular organisms → Bacteria	1744	Open in IMG/M
3300031548\|Ga0307408_100574637	Not Available	998	Open in IMG/M
3300031548\|Ga0307408_102240339	Not Available	528	Open in IMG/M
3300031847\|Ga0310907_10320675	Not Available	786	Open in IMG/M
3300031854\|Ga0310904_10105769	Not Available	1556	Open in IMG/M
3300031858\|Ga0310892_10163324	All Organisms → cellular organisms → Bacteria	1305	Open in IMG/M
3300031892\|Ga0310893_10026215	All Organisms → cellular organisms → Bacteria	1766	Open in IMG/M
3300031892\|Ga0310893_10558893	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Povalibacter → Povalibacter uvarum	519	Open in IMG/M
3300031901\|Ga0307406_10061364	All Organisms → cellular organisms → Bacteria	2428	Open in IMG/M
3300031901\|Ga0307406_10100961	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Povalibacter → Povalibacter uvarum	1965	Open in IMG/M
3300031901\|Ga0307406_10687559	All Organisms → cellular organisms → Bacteria	853	Open in IMG/M
3300031908\|Ga0310900_10128259	All Organisms → cellular organisms → Bacteria	1680	Open in IMG/M
3300031908\|Ga0310900_10950166	All Organisms → cellular organisms → Bacteria	704	Open in IMG/M
3300031911\|Ga0307412_10512403	All Organisms → cellular organisms → Bacteria	1001	Open in IMG/M
3300031911\|Ga0307412_10695027	All Organisms → cellular organisms → Bacteria	872	Open in IMG/M
3300031913\|Ga0310891_10071868	Not Available	1014	Open in IMG/M
3300031940\|Ga0310901_10592231	Not Available	507	Open in IMG/M
3300031943\|Ga0310885_10526072	Not Available	647	Open in IMG/M
3300031995\|Ga0307409_100901228	Not Available	898	Open in IMG/M
3300032002\|Ga0307416_100477863	All Organisms → cellular organisms → Bacteria	1305	Open in IMG/M
3300032002\|Ga0307416_101901966	Not Available	698	Open in IMG/M
3300032005\|Ga0307411_11306078	Not Available	661	Open in IMG/M
3300032005\|Ga0307411_11564732	Not Available	607	Open in IMG/M
3300032013\|Ga0310906_11335819	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Povalibacter → Povalibacter uvarum	524	Open in IMG/M
3300032017\|Ga0310899_10274629	Not Available	774	Open in IMG/M
3300032080\|Ga0326721_10946448	Not Available	548	Open in IMG/M
3300032126\|Ga0307415_100864531	All Organisms → cellular organisms → Bacteria	831	Open in IMG/M
3300032179\|Ga0310889_10334830	Not Available	738	Open in IMG/M
3300032211\|Ga0310896_10687781	Not Available	578	Open in IMG/M
3300034670\|Ga0314795_041985	Not Available	783	Open in IMG/M
3300034819\|Ga0373958_0185579	Not Available	538	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	52.05%
Environmental	Environmental	47.95%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	52.05%
Terrestrial	Environmental → Terrestrial	45.21%
Aquatic	Environmental → Aquatic	2.74%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	45.21%
Rhizosphere	Host-Associated → Plants → Rhizosphere	40.41%
Rhizoplane	Host-Associated → Plants → Rhizoplane	11.64%
Freshwater	Environmental → Aquatic → Freshwater	2.05%
Sediment	Environmental → Aquatic → Sediment	0.68%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	37.67%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	34.25%
Loam	Environmental → Terrestrial → Soil → Loam	6.85%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	6.85%
Soil	Host-Associated → Plants → Rhizosphere → Soil	6.16%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	4.11%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	2.05%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.68%
Sand	Environmental → Terrestrial → Soil → Sand	0.68%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.68%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	34.25%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	11.64%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	9.59%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	7.53%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.85%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	6.85%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	6.16%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	4.11%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	4.11%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	4.11%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	2.05%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.68%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	0.68%
Desert	Environmental → Terrestrial → Soil → Sand → Desert	0.68%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.68%

Habitat	Taxonomy	Distribution
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	13.01%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	11.64%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	10.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	7.53%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.79%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	4.11%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.42%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	3.42%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	3.42%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.74%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	2.74%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	2.74%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.74%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	2.05%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	2.05%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	2.05%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.37%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	1.37%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.37%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.37%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	1.37%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.37%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.37%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.37%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.37%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.68%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.68%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.68%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	0.68%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	0.68%
Soil	Environmental → Terrestrial → Soil → Sand → Desert → Soil	0.68%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.68%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.68%
Rhizosphere Soil	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil	0.68%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.68%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.68%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.68%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2088090015	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000890	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300003267	Sugarcane bulk soil Sample L1	Environmental	Open in IMG/M
3300003319	Sugarcane bulk soil Sample L2	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005333	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG	Host-Associated	Open in IMG/M
3300005336	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005345	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005718	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2	Host-Associated	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300006853	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006894	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Control	Environmental	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300009011	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300010145	Soil microbial communities from Hawaii, USA to study soil gas exchange rates - KP-HI-INT metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300011332	Soil microbial communities from California, USA to study soil gas exchange rates - SR-CA-SC2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300011333	Cornfield soil microbial communities from Stanford, California, USA - CI-CA-CRN metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012907	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S044-104R-1	Environmental	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300018066	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_b1	Environmental	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300018429	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 T	Environmental	Open in IMG/M
3300018465	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 IS	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300019356	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)	Environmental	Open in IMG/M
3300019361	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)	Environmental	Open in IMG/M
3300019362	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1 (version 2)	Environmental	Open in IMG/M
3300019377	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 T	Environmental	Open in IMG/M
3300020202	Soil microbial communities from Anza Borrego desert, Southern California, United States - S1_10	Environmental	Open in IMG/M
3300022737	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S094-311B-5	Environmental	Open in IMG/M
3300025893	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025908	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025921	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025924	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027886	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost (SPAdes)	Environmental	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028379	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300030783	Forest soil microbial communities from USA, for metatranscriptomics studies - Jemez Pines PI 3C (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030785	Forest soil microbial communities from USA, for metatranscriptomics studies - Jemez Pines PI 5C (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031039	Forest soil microbial communities from USA, for metatranscriptomics studies - Jemez Pines PI 6C (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031054	Forest soil microbial communities from USA, for metatranscriptomics studies - Jemez Pines PI 1C (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031229	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT155D38	Environmental	Open in IMG/M
3300031538	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D1	Environmental	Open in IMG/M
3300031548	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3	Host-Associated	Open in IMG/M
3300031847	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D4	Environmental	Open in IMG/M
3300031854	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1	Environmental	Open in IMG/M
3300031858	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D2	Environmental	Open in IMG/M
3300031892	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D2	Environmental	Open in IMG/M
3300031901	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2	Host-Associated	Open in IMG/M
3300031908	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1	Environmental	Open in IMG/M
3300031911	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1	Host-Associated	Open in IMG/M
3300031913	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D4	Environmental	Open in IMG/M
3300031940	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D2	Environmental	Open in IMG/M
3300031943	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D2	Environmental	Open in IMG/M
3300031995	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2	Host-Associated	Open in IMG/M
3300032002	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3	Host-Associated	Open in IMG/M
3300032005	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1	Host-Associated	Open in IMG/M
3300032013	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3	Environmental	Open in IMG/M
3300032017	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D4	Environmental	Open in IMG/M
3300032080	Soil microbial communities from Southern Great Plains, Lamont, Oklahoma, United States - SGP_1_2016	Environmental	Open in IMG/M
3300032126	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2	Host-Associated	Open in IMG/M
3300032179	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D2	Environmental	Open in IMG/M
3300032211	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D1	Environmental	Open in IMG/M
3300034670	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8R4 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034819	Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_1	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GPICI_01226620	2088090015	Soil	MRWFFLAVGVVAWLLALGVVWIFSESGGALTFIAAGVFATVAILALVGERIIKTLEEIRDGSVTRIRVNTPAERVVTERTVSEREAEQLAASR
GPICI_00457050	2088090015	Soil	MRWFFLAVGVLAWVLALGVVWIFSESGGALTFIAAGVFATVAILALVGERIIKTLEEIRDGSVTRIRVNTPGERVVTERVRSESEVEQLAASR
INPhiseqgaiiFebDRAFT_1053306921	3300000364	Soil	MRWFFLAVGVLGWLLALGVVWIFAQSGGALTFIAAGVFATVAILALVGERIIKTLEEIRDGSVTRIRVNAPADKAVTERVVTEREVEQL
INPhiseqgaiiFebDRAFT_1053364041	3300000364	Soil	MRWFFLAVGVLAWFLALGVVWIFSESGGALTFIAAGVFATVAILALVGERIIKTLEEIRDGSVTRIRVNTPGERVVTERAVSEREVEQLAAS
JGI11643J12802_110966152	3300000890	Soil	MRWFFLAVGVLGWVLALGVVWIFAQSGGALTFIAAGVFATVAILALVGERIIKTLEEIRDGSVTRIRVNAPAERAVTERVVTEREVETLA
soilL1_100223442	3300003267	Sugarcane Root And Bulk Soil	MRWFFLAVGILGWLLALGVVWIFAQSGGALTFIAAGVFATCAIIALVGERIIKTLEEIRDGSVTRIRVNTPAERVTERVVTEREAEQLAASR*
soilL2_102581102	3300003319	Sugarcane Root And Bulk Soil	MRWFFLAVGVLAWMLALGVVWIFSESGGALTFIAAGVFATVAILALVGERIIKTLEEIRDGSVTRIRVNAPGERAVTERVVSEREVEQLATTR*
Ga0062593_1003780752	3300004114	Soil	MRWFFLAVGVLGWLLALGVVWIFAQSGGALTFIAAGVFATVAILALVGERIIKTLEEIRDGSVTRIRVNTPADRAVTERVVTEREAEQLAASR*
Ga0062593_1006542312	3300004114	Soil	MRWFFLAVGILGWVLALGVVWIFAQSGGALTFIAAGVFATVAILALVGERVIKTLEEIRDGSVTRIRVNAPTATERVVTDRVLTEREAEVAASRVAASR*
Ga0062589_1002920042	3300004156	Soil	MRWFFLAVGVLGWLLALGVVWIFAQSGGALTFIAAGVFATVAILALVGERIIKTLEEIRDGSVTRIRVNTPADRAVTERVVTERAAEQLAASR*
Ga0063356_1001181612	3300004463	Arabidopsis Thaliana Rhizosphere	MRWFFLVVGVLAWLLALGVVWIFSESGGALTFIAAGVFATVAILALVGERIIKTLEEIRDGSVTRIRVNAPAERAVTERVVTEREVEPLATTR*
Ga0063356_1001382152	3300004463	Arabidopsis Thaliana Rhizosphere	MRWFFLAVGVLGWLLALGVVWIFAQSGGALTFIAAGVFATVAILALVGERIIKTLEEIRDGSVTRIRVNTPADRAVTERVVTQREAEQLAASR*
Ga0062592_1011809591	3300004480	Soil	MRWFFLAVGILGWVLALGVVWIFAQSGGALTFIAAGVFATVAILALVGERVIKTLEEIRDGSVTRIRVNAPTATERVVTD
Ga0070670_1002212961	3300005331	Switchgrass Rhizosphere	AVGILGWVLALGVVWIFAQSGGALTFIAAGVFATVAILALVGERVIKTLEEIRDGSVTRIRVNAPTAAERVVTDRVVTEREAEVAASR*
Ga0070677_102477581	3300005333	Miscanthus Rhizosphere	MRWFFLAVGVLGWILALGVVWIFAQSGGALTFIAAGVFATVAILALVGERIIKTLEEIRDGSVTRIRVNTPADRAVTERVVTEREAEQLAASR*
Ga0070680_1012115112	3300005336	Corn Rhizosphere	MRWFFLAVGVVAWILALGVVWIFSESGGALTFIAAGVFATVAILALVGERIIKTLEEIRDGSVTRIRVNTPSERVVTERAVSEREVEQLATSR*
Ga0070680_1018446481	3300005336	Corn Rhizosphere	MRWFFLAVGVLAWILALGVVWIFSESGGALTFIAAGVFATVAILALVGERIIKTLEEIRDGSVTRIRVNTPAERVVTERVVAESEAEQLAASR*
Ga0068868_1018653412	3300005338	Miscanthus Rhizosphere	RWFFLAVGVLGWLLALGVVWIFAQSGGALTFIAAGVFATVAILALVGERIIKTLEEIRDGSVTRIRVNTPADRAVTERVVTEREAEQLAASR*
Ga0070692_102950281	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	MRWFFLAVGVLGWLLALGVVWIFAQSGGALTFIAAGVFATVAILALVGERIIKTLEEIRDGSVTRIRVNAPAERAVTERVVTEREVEQLAS*
Ga0070705_1003727341	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	VLALGVVWIFAQSGGALTFIAAGVFATVAILALVGERVIKTLEEIRDGSVTRIRVNAPTATERVVTDRVLTEREAEVAASRVAASR*
Ga0070700_1000416693	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	MRWFFLAVGVLGWLLALGVVWIFAQSGGALTFIAAGVFATVAILALVGERIIKTLEEIRDGSVTRIRVNTPADRAVTERVVTEREAEQLA
Ga0070678_1004892442	3300005456	Miscanthus Rhizosphere	WFFLAVGILGWVLALGVVWIFAQSGGALTFIAAGVFATVAILALVGERVIKTLEEIRDGSVTRIRVNAPTATERVVTDRVLTEREAEVAASRVAASR*
Ga0070698_1005540592	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MRWFFLAVGVLAWLLALGVVWIFSESGGALTFIAAGVFATVAILALVGERIIKVLEEIRDGSVTRIRVNTPAERVVTERAVSEREVEQLAASR*
Ga0070693_1009437721	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	MRWFFLAVGVLGWLLALGVVWIFAQSGGALTFIAAGVFATVAILALVGERIIKTLEEIRDGSVTRIRVNTPADRAVTERVVTER
Ga0070664_1000722312	3300005564	Corn Rhizosphere	LAVGILGWVLALGVVWIFAQSGGALTFIAAGVFATVAILALVGERVIKTLEEIRDGSVTRIRVNAPTATERVVTDRVLTEREAEVAASRVAASR*
Ga0068857_1019486152	3300005577	Corn Rhizosphere	MRWFFLAVGVLAWVLALGVVWIFSESGGALTFIAAGVFATVAILALVGERIIKTLEEIRDGSVTRIRVNTPAERVVTERVVSESEAEQLAASR*
Ga0068854_1003928742	3300005578	Corn Rhizosphere	MRWFFLAVGVLGWILALGVVWIFAQSGGALTFIAAGVFATVAILALVGERIIKTLEEIRDGSVTRIRVNAPTATERVVTDRVLTEREAEVAASRVAASR*
Ga0068866_114577852	3300005718	Miscanthus Rhizosphere	MRWFFLAVGVLGWILALGVVWIFAQSGGALTFIAAGVFATVAILALVGERIIKTLEEIRDGSVTRIRVNAPAERAVTERVVTEREVEQLAS*
Ga0068860_1014113641	3300005843	Switchgrass Rhizosphere	VVWIFAQSGGALTFIAAGVFATVAILALVGERIIKTLEEIRDGSVTRIRVNAPAERAVTERVVTEREVEQLAS*
Ga0075417_100357593	3300006049	Populus Rhizosphere	MRWFFLAVGVLGWILALGVVWIFAQSGGALTFIAAGVFATVAILALVGERIIKTLEEIRDGSVTRIRVTTPPERVVPEREVEQLATSR*
Ga0075417_104734661	3300006049	Populus Rhizosphere	MRWFFLAVGVLAWLLALGVVWIFSESGGALTFIAAGVFATVAIVALVGERVIKTLEEIRDGSVTKIRVNPPAERAVTERVVSEREVEQLATSR*
Ga0075428_1001482383	3300006844	Populus Rhizosphere	MRWFFLAVGILAWLVALGVVWIFSESGGALTFIAAGVFATVAILALVGERIIKTLEEIRDGSVTRIRVNAAPERAVTERVVTEREVEQLAASR*
Ga0075428_1001709483	3300006844	Populus Rhizosphere	MRWFFLAVGILGWVLALGVVWIFAQSGGALTFIAAGVFATVAILALVGERVIKTLEEIRDGSVTRIRVNAPTATERVVTDRVVTEREAEVAASR*
Ga0075421_1005080541	3300006845	Populus Rhizosphere	NVMRMFFVAVGILSWIWALAVLWIFAENGGALTVIAAGVFAIVAMVALGCERILKTLEEIRDGSVTRIRVNAAPERAVTERVVTEREAEQLAASR*
Ga0075430_1004485952	3300006846	Populus Rhizosphere	MRWFFLAVGVLAWLLALGVVWIFSESGGALTFIAAGVFATVAILALVGERIIKTLEEIRDGSVTRIRVNAAPERAVTERVVTEREAEQLAASR*
Ga0075430_1008634302	3300006846	Populus Rhizosphere	MRWFFLAVGVLAWVLALGVVWIFSESGGALTFIAAGVFATVAILALVGERIIKTLEEIRDGSVTRIRVNAAPERAVTERVVTEREAEQLAASR*
Ga0075420_1004191972	3300006853	Populus Rhizosphere	MRWFFLAVGVLAWVLALGVVWIFSESGGALTFIAAGVFATVAILALVGERIIKTLEEIRDGSVTRIRVNTPGERVVTERVRSESEVEQLAASR*
Ga0075434_1002828742	3300006871	Populus Rhizosphere	MRWFFLAVGVLGWLLALGVVWIFAQSGGALTFIAAGVFATVAILALVGERIIKTLEEIRDGSVTRIRVNTPAERVVTERARSESEVEQLAASR*
Ga0079215_116637521	3300006894	Agricultural Soil	MRWFFLAVGVLAWLLALGVVWIFSESGGALTFIAAGVFATVAILSLVGERIIKTLEEIRDGSVTRIRVNAPAERAVTERVVTEREVEPLATTR*
Ga0075424_1016788392	3300006904	Populus Rhizosphere	MRWFFLAVGVLAWLLALGVVWIFSESGGALTFIAAGVFATVAILALVGERIIKTLEEIRDGSVTRIRVNTPAERVVTERARSESEVEQLAASR*
Ga0075424_1027245951	3300006904	Populus Rhizosphere	MRWFFLAVGVLGWILALGVVWIFAQSGGALTFIAAGVFATVAILALVGERIIKTLEEIRDGSVTRIRVNAPTERVVTDRVVTEREAEQLATSR*
Ga0079218_103706672	3300007004	Agricultural Soil	MRWFFLAVGILAWLVALGVVWIFSESGGALTFIAAGVFATVAILALVGERIIKTLEEIRDGSVTRIRVNTPTERAVTERVVTEREVEPLATTR*
Ga0105251_106619471	3300009011	Switchgrass Rhizosphere	LGVVWIFAQSGGALTFIAAGVFATVAILALVGERIIKTLEEIRDGSVTRIRVNTPADRAVTERVVTQREAEQLAASR*
Ga0111539_100242865	3300009094	Populus Rhizosphere	MRWFFLAVGILGWVLALGVVWIFAQSGGALTFIAAGVFATVAILALVGERVIKTLEEIRDGSVTRIRVNAPTATERVVTDRVVTEREAEVAASRVAASR*
Ga0111539_100334024	3300009094	Populus Rhizosphere	MRWFFLAVGVLAWLLALGVVWIFSESGGALTFIAAGVFATVAILALVGERIIKTLEEIRDGSVTRIRVNTPAERVVTERTVSEREAEQLAASR*
Ga0105245_108181992	3300009098	Miscanthus Rhizosphere	VVWIFAQSGGALTFIAAGVFATVAILALVGERIIKTLEEIRDGSVTRIRVNTPADRAVTERVVTEREAEQLAASR*
Ga0105247_103932822	3300009101	Switchgrass Rhizosphere	GWLLALGVVWIFAQSGGALTFIAAGVFATVAILALVGERIIKTLEEIRDGSVTRIRVNTPADRAVTERVVTEREAEQLAASR*
Ga0105243_106558791	3300009148	Miscanthus Rhizosphere	IVEKCHMRWFFLAVGVLGWLLALGVVWIFAQSGGALTFIAAGVFATVAILALVGERIIKTLEEIRDGSVTRIRVNTPADRAVTERVVTEREAEQLAASR*
Ga0111538_115041961	3300009156	Populus Rhizosphere	LGVVWIFSESGGALTFIAAGVFATVAILALVGERIIKTLEEIRDGSVTRIRVNTPGERVVTERVRSESEVEQLAASR*
Ga0105249_100809102	3300009553	Switchgrass Rhizosphere	VGILGWILALSVVWIFAQSGGALTFIAAGVFATVAILALVGERVIKTLEEIRDGSVTRIRVNAPTATERVVTDRVLTEREAEVAASRVAASR*
Ga0126321_13030151	3300010145	Soil	NVMRWFFLAVGVLAWLLALGVVWIFSESGGALTFIAAGVFATVAIMALVGERIIKVLEEIRDGSVTRIRVNTPAERATTERVVSEREVEQLATSR*
Ga0126377_122447292	3300010362	Tropical Forest Soil	GVLGWLLALGVVWIFAQSGGALTFIAAGVFATVAILALVGERIIKTLEEIRDGSVTRIRVNTPEDRAVSERVVTEREVEQLAASR*
Ga0105239_118612432	3300010375	Corn Rhizosphere	MRWFFLAVGILGWVLALGVVWIFAQSGGALTFIAAGVFATVAILALVGERIIKTLEEIRDGSVTRIRVNAPAERAVTERVVTEREVEQ
Ga0134121_100690204	3300010401	Terrestrial Soil	ALGVVWIFAQSGGALTFIAAGVFATVAILALVGERIIKTLEEIRDGSVTRIRVNTPADRAVTERVVTQREAEQLAASR*
Ga0134121_108468052	3300010401	Terrestrial Soil	MRWFFLAVGVLGWILALGVVWIFAQSGGALTFIAAGVFATVAILALVGERIIKTLEEIRDGSVTRIRVNAPAERAVTERVVTEREVEQLA
Ga0105246_112699811	3300011119	Miscanthus Rhizosphere	MRWFFLAVGVLGWLLALGVVWIFAQSGGALTFIAAGVFATVAILALVGERVIKTLEEIRDGSVTRIRVNAPTATERVVTDRVLTEREAEVAASRVAASR*
Ga0126317_105715841	3300011332	Soil	MRWFFLAVGVLAWALALGVVWIFSESGGALTFIAAGVFATVAILALVGERIIKVLEEIRDGSVTRIRVNTPAERVVTDRAVSEREVEQLAASR*
Ga0127502_110542083	3300011333	Soil	FFLAVGVLAWLLALGVVWIFSESGGALTFIAAGVFATVAILSLVGERIIKTLEEIRDGSVTRIRVNAPAERAVTERVVTEREVEPLATTR*
Ga0150985_1186406792	3300012212	Avena Fatua Rhizosphere	VEKCHMRWFFLAVGILGWLLALGVVWIFAQSGGALTFVAAGVFATVAILALVGERIIKTLEEIRDGSVTRIRVNAPGERAVTDRVVTEREVEQLATSR*
Ga0150984_1123672692	3300012469	Avena Fatua Rhizosphere	MRWFFLAVGILGWLLALGVVWIFAQSGGALTFVAAGVFATVAILALVGERIIKTLEEIRDGSVTRIRVNAPGERAVTDRVVTEREVEQLATSR*
Ga0157283_103249171	3300012907	Soil	MRWFFLAVGVLGWLLALGVVWIFAQSGGALTFIAAGVFATVAILALVGERIIKTLEEIRDGSVTRIRVNTPADRAVTERVVTEREAEQLAAS
Ga0157380_128367492	3300014326	Switchgrass Rhizosphere	MRWFFLAVGILGWVLALGVVWIFAQSGGALTFIAAGVFATVAILALVGERVIKTLEEIRDGSVTRIRVNTPTERVVTDRVVTEREA
Ga0157377_100642133	3300014745	Miscanthus Rhizosphere	MRWFFLAVGVLGWLLALGVVWIFAQSGGALTFIAAGVFATVAILALVGERIIKTLEEIRDGSVTRIRVNTPADRAVPERVVTEREVEQLAS*
Ga0157377_108033491	3300014745	Miscanthus Rhizosphere	VMRWFFLAVGVLAWVLALGVVWIFSESGGALTFIAAGVFATVAILALVGERIIKTLEEIRDGSVTRIRVNTPADRAVTERVVTEREAEQLAASR*
Ga0157379_101870212	3300014968	Switchgrass Rhizosphere	MRWFFLAVGVLGWLLALGVVWIFAQSGGALTFIAAGVFATVANLALVGERIIKTLEEIRDGSVTRIRVNTPADRAVTERVVTQREAEQLAASR*
Ga0132258_1000194710	3300015371	Arabidopsis Rhizosphere	MRWFFLAVGVLAWLLALGVVWIFSESGGALTFIAAGVFATVAILALVGERIIKTLEEIRDGSVTRIRVNTPAERVVTERARSGSEVEQLAASR*
Ga0132258_100568065	3300015371	Arabidopsis Rhizosphere	MRWFFLAVGVLGWVLALGVVWIFAQSGGALTFIAAGVFATVAILALVGERVIKTLEEIRDGSVTRIRVNTPADRVVTERAVTEREAEQLAASR*
Ga0132256_1023477042	3300015372	Arabidopsis Rhizosphere	FSYSLLWRKDMRWFFLAVGVLAWVLALGVVWIFSESGGALTFIAAGVFATVAILALVGERIIKTLEEIRDGSVTRIRVNTPAERVVTERARSESEVEQLAASR*
Ga0132257_1004448482	3300015373	Arabidopsis Rhizosphere	MRWFFLAVGVLAWVLALGVVWIFSESGGALTFIAAGVFATVAILALVGERIIKTLEEIRDGSVTRIRVNTPAERVVTERARSGSEVEQLAASR*
Ga0132257_1015861671	3300015373	Arabidopsis Rhizosphere	MRWFFLAVGVLGWALALGVVWIFAQSGGALTFIAAGVFATVAILALVGERIIKTLEEIRDGSVTRIRVNPPGDRAVTERVVT
Ga0132255_1012618163	3300015374	Arabidopsis Rhizosphere	MRWFFLAVGVLGWLLALGVVWIFAQSGGALTFIAAGVFATVAILALVGERIIKTLEEIRDGSVTRIRVNAPAERAVTERVVTEREGEQLAS*
Ga0184617_11292172	3300018066	Groundwater Sediment	MRWFFLVVGVSAWLVALGVVWIFSQSGGALTFIAAGVFATVAVLALVGERIIKTLEEIRDGSVTRIRVNTPAERVVTEREVDVQRPLSAT
Ga0190265_102247352	3300018422	Soil	MRMFFISVGVLAWIWALAVLWLFAESGGALTIIAAGVFAVVAMVALGTERILKALEEIRDGSVTRIRVSKPGTSERVVKEERVITERDAEVAASAPLGTPV
Ga0190265_103155323	3300018422	Soil	MRWFFLAVGILAWLVALGVVWIFSESGGALTFIAAGVFATVAILALVGERIIKTLEQIRDGSVTRIRVNTPTERAVTERVVTER
Ga0190272_117185101	3300018429	Soil	MRWFFLAVGILAWLLALGVVWIFSESGGALTFIASGVFATVAILALVGERIIKTLEEIRDGSVTRIRVNAPAERAVTERVVTEREVEPLATTR
Ga0190269_113610301	3300018465	Soil	MRWFFLAVGVVAWTLALGVVWIFAESGGALTFIAAGVFATVAMVALGFERVIKTLEDIRDNSVTRIRVNTPAEPVPVEREVERRQPLGAQSI
Ga0190274_128195202	3300018476	Soil	GVVWIFSESGGALTFIAAGVFATVAILALVGERIIKVLEEIRDGSVTRIRVNTPAERVVTERAVSEREVEPLAASR
Ga0173481_102951792	3300019356	Soil	LAVGILGWVLALGVVWIFAQSGGALTFIAAGVFATVAILALVGERVIKTLEEIRDGSVTRIRVNAPTATERVVTDRVVTEREAEVAASR
Ga0173482_100835522	3300019361	Soil	MRWFFLAVGVLGWLLALGVVWIFAQSGGALTFIAAGVFATVAILALVGERIIKTLEEIRDGSVTRIRVNTPADRAVTERVVTEREAEQLAASR
Ga0173479_100342412	3300019362	Soil	MRWFFLAVGVLGWLLALGVVWIFAQSGGALTFIAAGVFATVAILALVGERIIKTLEEIRDGSVTRIRVNTPADRAVTERVVTQREAEQLAASR
Ga0190264_101602613	3300019377	Soil	MRWFFLAVGVMAWLLALGVVWIFSESGGALTFIASGVFATVAILALVGERIIKTLEEIRDGSVTRIRVNAPAERAVTERVVTEREVEPLATTR
Ga0196964_102974741	3300020202	Soil	MRWFFGAVGVLAWIWALAVLWIFKESGGALTMIAAGIFAVVAVIALGCERILKTLEDIRDGVSPVARPGERVVREREIVKDTRHAPAV
Ga0247747_10309892	3300022737	Soil	MRWFFLAVGILGWVLALGVVWIFAQSGGALTFIAAGVFATVAILALVGERVIKTLEEIRDGSVTRIRVNAPTATERVVTDRVLTEREAEVAASRVAASR
Ga0207682_101290852	3300025893	Miscanthus Rhizosphere	MRWFFLAVGILGWVLALGVVWIFAQSGGALTFIAAGVFATVAILALVGERIIKTLEEIRDGSVTRIRVNTPADRAVTERVVTQREAEQLAASR
Ga0207642_101558172	3300025899	Miscanthus Rhizosphere	MRWFFLAVGVLGWILALGVVWIFAQSGGALTFIAAGVFATVAILALVGERIIKTLEEIRDGSVTRIRVNAPAERAVTERVVTEREVEQLAS
Ga0207643_100458063	3300025908	Miscanthus Rhizosphere	MRWFFLAVGILGWVLALGVVWIFAQSGGALTFIAAGVFATVAILALVGERVIKTLEEIRDGSVTRIRVNAPTATERVVTDRVVTEREAEVAASR
Ga0207652_116303561	3300025921	Corn Rhizosphere	MRWFFLAVGILGWVLALGVVWIFAQSGGALTFIAAGVFATVAILALVGERVIKTLEEIRDGSVTRIRVNAPTATERVVTDRVVTERE
Ga0207694_117776532	3300025924	Corn Rhizosphere	MRWFFLAVGVLGWLLALGVVWIFAQSGGALTFIAAGVFATVAILALVGERIIKTLEEIRDGSVTRIRVNTPADRAVTERVVTERAAEQLAASR
Ga0207687_114536721	3300025927	Miscanthus Rhizosphere	MRWFFLAVGVLGWILALGVVWIFAQSGGALTFIAAGVFATVAILALVGERIIKTLEEIRDGSVTRIRVNTPADRAVTERVVTEREAEQLAASR
Ga0207701_103083954	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	MRWFFLAVGILGWVLALGVVWIFAQSGGALTFIAAGVFATVAILALVGERIIKTLEEIRDGSVTRIRVNTPADRAVTERVVTEREAEQLAAS
Ga0207669_104710913	3300025937	Miscanthus Rhizosphere	MRWFFLAVGVLGWLLALGVVWIFAQSGGALTFIAAGVFATVAILALVGERIIKTLEEIRDGSVTRIRVNTPADRAVTERVVTQREAEQ
Ga0207712_100101924	3300025961	Switchgrass Rhizosphere	MRWFFLAVGILGWVLALGVVWIFAQSGGALTFIAAGVFATVAILALVGERVIKTLEEIRDGSVTRIRVNAPTATERVVTDRVVTEREAEVAASRVAASR
Ga0207712_112475042	3300025961	Switchgrass Rhizosphere	MRWFFLAVGVLGWLLALGVVWIFAQSGGALTFIAAGVFATVAILALVGERIIKTLEEIRDGSVTRIRVNTPADRAVTERVVTQREA
Ga0207708_100232741	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	MRWFFLAVGVLGWLLALGVVWIFAQSGGALTFIAAGVFATVAILALVGERIIKTLEEIRDGSVTRIRVNTPADRAVTERVVTQREAEQLAAS
Ga0207708_102607093	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	MRWFFLAVGVLGWILALGVVWIFAQSGGALTFIAAGVFATVAILALVGERIIKTLEEIRDGSVTRIRVNAPAERAVTERVVTEREVE
Ga0207676_117423801	3300026095	Switchgrass Rhizosphere	MRWFFLAVGILGWVLALGVVWIFAQSGGALTFIAAGVFATVAILALVGERVIKTLEEIRDGSVTRIRVNAPTATERVVTDRVVT
Ga0209814_103936291	3300027873	Populus Rhizosphere	MRWFFLAVGVLAWLLALGVVWIFSESGGALTFIAAGVFATVAIVALVGERVIKTLEEIRDGSVTKIRVNPPAERAVTERVVSEREVEQLATSR
Ga0209814_104395082	3300027873	Populus Rhizosphere	MRWFFLAVGVLGWILALGVVWIFAQSGGALTFIAAGVFATVAILALVGERIIKTLEEIRDGSVTRIRVTTPPERVVPEREVEQLATSR
Ga0209486_101404231	3300027886	Agricultural Soil	MRWFFLAVGVLAWLLALGVVWIFSESGGALTFIAAGVFATVAILSLVGERIIKTLEEIRDGSVTRIRVNAPAERAVTERVVTEREVEPLATTR
Ga0209486_104581051	3300027886	Agricultural Soil	MRWFFLAVGILAWLVALGVVWIFSESGGALTFIAAGVFATVAILALVGERIIKTLEEIRDGSVTRIRVNTPTERAVTERVVTEREVEPLATTR
Ga0207428_100605302	3300027907	Populus Rhizosphere	MRWFFLAVGVLAWLLALGVVWIFSESGGALTFIAAGVFATVAILALVGERIIKTLEEIRDGSVTRIRVNTPAERVVTERTVSEREAEQLAASR
Ga0209382_100024978	3300027909	Populus Rhizosphere	MRWFFLAVGILAWLVALGVVWIFSESGGALTFIAAGVFATVAILALVGERIIKTLEEIRDGSVTRIRVNAAPERAVTERVVTEREVEQLAASR
Ga0209382_112192862	3300027909	Populus Rhizosphere	MRWFFLAVGVLAWVLALGVVWIFSESGGALTFIAAGVFATVAILALVGERIIKTLEEIRDGSVTRIRVNAAPERAVTERVVTEREAEQLAASR
Ga0268266_104763673	3300028379	Switchgrass Rhizosphere	MRWFFLAVGVLGWLLALGVVWIFAQSGGALTFIAAGVFATVAILALVGERIIKTLEEIRDGSVTRIRVNTPADRAVTERVVTERE
Ga0102752_15990932	3300030783	Soil	VVGILAWLVALGVVWIFSQSGGALTFIAAGVFATVAVLALVGERVIKTLEEIRDGSVTRIRVNAPAERVVTEREVDVQRPLGAV
Ga0102752_16250821	3300030783	Soil	VGVSSWLVALGVVWIFSQSGGALTFIAAGVFATVAVLALVGERIIKTLEEIRDGSVTRIRVNTPAERVVTEVTEREVDVQRPLGAV
Ga0102757_102127112	3300030785	Soil	RFFLAVGVLGWLLSLGVVWIFAQSGGALTFIAAGVFATVAILALVGERIIKTLEEIRDGSVTRIRVNAPADKAVTERVVTEREVEPLPTIR
Ga0102760_107365902	3300031039	Soil	GILGWLFLAVGILGWLLALGVVWIFAQSGGALTFIAAGVFATCALIALVGERIIKTLEEIRDGSVTRIRVNAPAERVTERVVTERESEQLATSR
Ga0102746_110503212	3300031054	Soil	VALGVVWIFSQSGGALTFIAAGVFATVAVLALVGERVIKTLEEIRDGSVTRIRVNAPAERVVTEREVDVQRPLGAV
Ga0102746_110602792	3300031054	Soil	RWFFLAVGVVAWVLALGVVWIFSESGGALTFIAAGVFATVAIVALVGERIIKTLEEIRDGSVTRIRVNTPAERVVTERAVPEREVEPLAASR
Ga0299913_114915272	3300031229	Soil	MRWFFLAVGILAWLVALGVVWIFSESGGALTFIAAGVFATVAILALVGERIIKTLEEIRDGSVTRIRVNAPAERAVTERVVTEREVEPLATTR
Ga0310888_104020841	3300031538	Soil	MRWFFLAVGVLGWILALGVVWIFAQSGGALTFIAAGVFATVAILALVGERIIKTLEEIRDGSVTRIRVNTPGDRAVSERVVTEREVEQLAASR
Ga0310888_108976562	3300031538	Soil	MRWFFLAVGILGWVLALGVVWIFAQSGGALTFIAAGVFATVAILALVGERVIKTLEEIRDGSVTRIRVNTPTERVVTDRVVTEREAEVAASR
Ga0307408_1000213381	3300031548	Rhizosphere	GWILALGVVWIFAQSGGALTFIAAGVFATVAILALVGERIIKTLEEIRDGSVTRIRVNTPPERVVPEREVEQLATSR
Ga0307408_1000659103	3300031548	Rhizosphere	MRWFFLAVGVAGWLLALGVVWIFAQSGGALTFIAAGVFATVAILALVGERIIKTLEEIRDGSVTRIRVNTPADQVETERVVSEREAEQLATSR
Ga0307408_1001689743	3300031548	Rhizosphere	MRWFFLAVGVLAWILALGVVWIFSESGGALTFIAAGVFATVAILALVGERIIKTLEEIRDGSVTRIRVNTPGERVVTERAVSEREVEQLAASR
Ga0307408_1005746373	3300031548	Rhizosphere	MRWFFLAVGVLAWALALGVVWIFAESGGALTFIAAGVFATVGILALVGERIIKTLEEIRDGSVTRIRVNTPAERGV
Ga0307408_1022403391	3300031548	Rhizosphere	MRWFFLAVGVMAWLLALGVVWIFSESGGALTFIAAGVFATVAILALVGERIIKTLEEIRDGSVTRIRVNAPAERAVTERVVTEREVEPLATTR
Ga0310907_103206751	3300031847	Soil	MRWFFLAVGILGWILALSVVWIFAQSGGALTFIAAGVFATVAILALVGERVIKTLEEIRDGSVTRIRVNAPTATERVVTDRVLTEREAEVAASRVAASR
Ga0310904_101057692	3300031854	Soil	MRWFFLAVGVLGWLLALGVVWIFAQSGGALTFIAAGVFATVAILALVGERIIKTLEEIRDGSVTRIRVNAPAERAVTERVVTEREVEQLAS
Ga0310892_101633242	3300031858	Soil	MRWFFLAVGILGWVLALGVVWIFAQSGGALTFIAAGVFATVAILALVGERIIKTLEEIRDGSVTRIRVNAPTERVVTDRVVTEREAEQLATSR
Ga0310893_100262153	3300031892	Soil	MRWFFLAVGVLGWLLALGVVWIFAQSGGALTFIAAGVFATVAILALVGERIIKTLEEIRDGSVTRIRVNTPGDLAVSERVVTEREVEQLAASR
Ga0310893_105588932	3300031892	Soil	RWFFLAVGVLGWILALGVVWIFAQSGGALTFIAAGVFATVAILALVGERIIKTLEEIRDGSVTRIRVTTPPERVVPEREVEQLATSR
Ga0307406_100613642	3300031901	Rhizosphere	MRWFFLAVGVLGWILALGVVWIFAQSGGALTFIAAGVFATVAILALVGERIIKTLEEIRDGSVTRIRVNTPPERVVPEREVEQLATSR
Ga0307406_101009611	3300031901	Rhizosphere	MRWFFLAVGVLAWVLALGVVWIFSESGGALTFIAAGVFATVAILALVGERIIKTLEEIRDGSVTRIRVNTPGERVVTERAVSEREVEQLAASR
Ga0307406_106875591	3300031901	Rhizosphere	VVGVLAWLVALGVVWIFAESGGALTFIAGGVFATVAILALVGERIIKTLEEIRDGSVTRIRMNAPAERVVTDRVVSEREAEQLAASR
Ga0310900_101282592	3300031908	Soil	MRWFFLAVGVLAWILALGVVWIFSESGGALTFIAAGVFATVAILALVGERIIKTLEEIRDGSVTRIRVNTPAERVVTERVVAESEAEQLAASR
Ga0310900_109501662	3300031908	Soil	LGWILALGVVWIFAQSGGALTFIAAGVFATVAILALVGERIIKTLEEIRDGSVTRIRVTTPPERVVPEREVEQLATSR
Ga0307412_105124032	3300031911	Rhizosphere	MRWFFLAVGVLAWVLALGVVWIFSESGGALTFIAAGVFATVAILALVGERVIKVLEEIRDGSVTRIRVNTPAERVVTERAVSEREVEQLAASR
Ga0307412_106950271	3300031911	Rhizosphere	MRWFFLAVGVLAWLLALGVVWIFSESGGALTFIAAGVFATVAILALVGERIIKTLEEIRDGSVTRIRVNAPAERAVTERVVTEREIEPLATTR
Ga0310891_100718682	3300031913	Soil	MRWFFLAVGVLGWILALGVVWIFAQSGGALTFIAAGVFATVAILALVGERVIKTLEEIRDGSVTRIRVNAPTATERVVTDRVLTEREAEVAASRVAASR
Ga0310901_105922311	3300031940	Soil	MRWFFLAVGILGWVLALGVVWIFAQSGGALTFIAAGVFATVAILALVGERIIKTLEEIRDGSVTRIRVNAPAERAVTERVVTEREVEQLAS
Ga0310885_105260722	3300031943	Soil	MRWFFLAVGVLGWLLALGVVWIFAQSGGALTFIAAGVFATVAILALVGERIIKTLEEIRDGSVTRIRVNTPGDRAVSERVVTEREVEQLAASR
Ga0307409_1009012281	3300031995	Rhizosphere	MRWFFLAVGVMAWLLALGVVWIFSESGGALTFIAAGVFATVAILALVGERIIKTLEEIRDGSVTRIRVNAPAERAVTERVVTEREVE
Ga0307416_1004778631	3300032002	Rhizosphere	MRWFFLAVGVMAWLLALGVVWIFSESGGALTFIAAGVFATVAILALVGERIIKTLEEIRDGSVTRIRVNAPAERAVT
Ga0307416_1019019662	3300032002	Rhizosphere	MRWFFLVVGVLAWLVALGVVWIFAESGGALTFIAGGVFATVAILALVGERIIKTLEEIRDGSVTRIRMNAPAERVVTDRVVSEREAEQLAASR
Ga0307411_113060782	3300032005	Rhizosphere	MRWFFLAVGVLAWALALGVVWIFSESGGALTFIAAGVFATVAILALVGERIIKTLEEIRDGSVTRIRVNAPGERAATERVVSER
Ga0307411_115647322	3300032005	Rhizosphere	LALGVVWIFAQSGGALTFIAAGVFATVAILALVGERIIKTLEEIRDGSVTRIRVNAPTERVVPTERVVTDRAVTEREAEQLAASR
Ga0310906_113358191	3300032013	Soil	LAVGVLGWILALGVVWIFAQSGGALTFIAAGVFATVAILALVGERIIKTLEEIRDGSVTRIRVNTPGDRAVSERVVTEREVEQLAASR
Ga0310899_102746291	3300032017	Soil	MRWFFLAVGVLGWLLALGVVWIFAQSGGALTFIAAGVFATVAILALVGERIIKTLEEIRDGSVTRIRVNTPGDLAVSERVVTEREVEQLAA
Ga0326721_109464481	3300032080	Soil	MRWFFLAVGILGWLLALGVVWIFAQSGGALTFIASGVFATVAILALVGERIIKTLEEIRDGSVTKIRVNAPAERVVTER
Ga0307415_1008645312	3300032126	Rhizosphere	VGVLAWLLALGVVWIFSESGGALTFIAAGVFATVAILALVGERIIKTLEEIRDGSVTRIRVNAPAERAVTERVVTEREIEPLATTR
Ga0310889_103348301	3300032179	Soil	MRWFFLAVGVLGWLLALGVVWIFAQSGGALTFIAAGVFATVAILALVGERIIKTLEEIRDGSVTRIRVNAPTERVVTDRVMTER
Ga0310896_106877811	3300032211	Soil	MRWFFLAVGVLGWLLALGVVWIFAQSGGALTFIAAGVFATVAIPALVGERIIKTLEEIRDGSVTRIRVNAPTERVVTDRVVTEREAEQLATSR
Ga0314795_041985_513_782	3300034670	Soil	FLAVGVLAWILALGVVWIFSESGGALTFIAAGVFATVAILALVGERIIKTLVDIRDGSVTRIRVNTPAERVVTERVVEESEAEQLAASR
Ga0373958_0185579_278_538	3300034819	Rhizosphere Soil	MRWFFLAVGVLGWLLALGVVWIFAQSGGALTFIAAGVFATVAILALVGERIIKTLEEIRDGSVTRIRVNAPAERAVTERVVTEREVE

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F049475

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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