NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome Family F049544

Metagenome Family F049544

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F049544
Family Type Metagenome
Number of Sequences 146
Average Sequence Length 50 residues
Representative Sequence LDGMVRYRFGDNAELMGAWRSARNVLGPFKTKNEPEAGGSQTPKAA
Number of Associated Samples 86
Number of Associated Scaffolds 146

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 19.44 %
% of genes near scaffold ends (potentially truncated) 76.03 %
% of genes from short scaffolds (< 2000 bps) 80.14 %
Associated GOLD sequencing projects 79
AlphaFold2 3D model prediction Yes
3D model pTM-score0.34

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (95.890 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil
(40.411 % of family members)
Environment Ontology (ENVO) Unclassified
(37.671 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(56.164 % of family members)


 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      

 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 17.57%    β-sheet: 0.00%    Coil/Unstructured: 82.43%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.34
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 146 Family Scaffolds
PF09957VapB_antitoxin 8.90
PF00291PALP 4.79
PF00072Response_reg 2.74
PF02371Transposase_20 2.74
PF13650Asp_protease_2 2.74
PF13540RCC1_2 2.74
PF02517Rce1-like 2.05
PF01402RHH_1 1.37
PF12833HTH_18 1.37
PF13975gag-asp_proteas 1.37
PF03958Secretin_N 1.37
PF04055Radical_SAM 1.37
PF16124RecQ_Zn_bind 1.37
PF00106adh_short 0.68
PF01555N6_N4_Mtase 0.68
PF13519VWA_2 0.68
PF13847Methyltransf_31 0.68
PF13489Methyltransf_23 0.68
PF13483Lactamase_B_3 0.68
PF03167UDG 0.68
PF13589HATPase_c_3 0.68
PF13604AAA_30 0.68
PF02954HTH_8 0.68
PF08327AHSA1 0.68
PF03372Exo_endo_phos 0.68
PF13176TPR_7 0.68
PF13560HTH_31 0.68
PF14499DUF4437 0.68
PF01872RibD_C 0.68
PF00069Pkinase 0.68
PF07883Cupin_2 0.68
PF01548DEDD_Tnp_IS110 0.68
PF00815Histidinol_dh 0.68
PF05685Uma2 0.68
PF11213DUF3006 0.68

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 146 Family Scaffolds
COG3547TransposaseMobilome: prophages, transposons [X] 3.42
COG0515Serine/threonine protein kinaseSignal transduction mechanisms [T] 2.74
COG1266Membrane protease YdiL, CAAX protease familyPosttranslational modification, protein turnover, chaperones [O] 2.05
COG4449Predicted protease, Abi (CAAX) familyGeneral function prediction only [R] 2.05
COG0141Histidinol dehydrogenaseAmino acid transport and metabolism [E] 0.68
COG0262Dihydrofolate reductaseCoenzyme transport and metabolism [H] 0.68
COG0692Uracil-DNA glycosylaseReplication, recombination and repair [L] 0.68
COG0863DNA modification methylaseReplication, recombination and repair [L] 0.68
COG1041tRNA G10 N-methylase Trm11Translation, ribosomal structure and biogenesis [J] 0.68
COG1573Uracil-DNA glycosylaseReplication, recombination and repair [L] 0.68
COG1985Pyrimidine reductase, riboflavin biosynthesisCoenzyme transport and metabolism [H] 0.68
COG2189Adenine specific DNA methylase ModReplication, recombination and repair [L] 0.68
COG3663G:T/U-mismatch repair DNA glycosylaseReplication, recombination and repair [L] 0.68
COG4636Endonuclease, Uma2 family (restriction endonuclease fold)General function prediction only [R] 0.68

 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms95.89 %
UnclassifiedrootN/A4.11 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300002557|JGI25381J37097_1064540All Organisms → cellular organisms → Bacteria588Open in IMG/M
3300002908|JGI25382J43887_10050799All Organisms → cellular organisms → Bacteria2254Open in IMG/M
3300003319|soilL2_10186887All Organisms → cellular organisms → Bacteria1361Open in IMG/M
3300004153|Ga0063455_100062475All Organisms → cellular organisms → Bacteria1345Open in IMG/M
3300004480|Ga0062592_100387163All Organisms → cellular organisms → Bacteria1105Open in IMG/M
3300005172|Ga0066683_10611982All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes658Open in IMG/M
3300005172|Ga0066683_10679114All Organisms → cellular organisms → Bacteria613Open in IMG/M
3300005175|Ga0066673_10005524All Organisms → cellular organisms → Bacteria5073Open in IMG/M
3300005177|Ga0066690_10898795All Organisms → cellular organisms → Bacteria566Open in IMG/M
3300005450|Ga0066682_10024801All Organisms → cellular organisms → Bacteria3445Open in IMG/M
3300005450|Ga0066682_10261171All Organisms → cellular organisms → Bacteria1116Open in IMG/M
3300005467|Ga0070706_100834984All Organisms → cellular organisms → Bacteria852Open in IMG/M
3300005518|Ga0070699_100232597All Organisms → cellular organisms → Bacteria1644Open in IMG/M
3300005518|Ga0070699_100478932All Organisms → cellular organisms → Bacteria1130Open in IMG/M
3300005537|Ga0070730_10143016All Organisms → cellular organisms → Bacteria → Acidobacteria1628Open in IMG/M
3300005540|Ga0066697_10567483All Organisms → cellular organisms → Bacteria634Open in IMG/M
3300005553|Ga0066695_10638952All Organisms → cellular organisms → Bacteria632Open in IMG/M
3300005561|Ga0066699_10320503All Organisms → cellular organisms → Bacteria1105Open in IMG/M
3300005561|Ga0066699_10682707All Organisms → cellular organisms → Bacteria733Open in IMG/M
3300005574|Ga0066694_10005010All Organisms → cellular organisms → Bacteria5382Open in IMG/M
3300005575|Ga0066702_10091631All Organisms → cellular organisms → Bacteria1719Open in IMG/M
3300005576|Ga0066708_10960447All Organisms → cellular organisms → Bacteria532Open in IMG/M
3300005586|Ga0066691_10431628All Organisms → cellular organisms → Bacteria785Open in IMG/M
3300005598|Ga0066706_10471122All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium1001Open in IMG/M
3300005615|Ga0070702_101838934All Organisms → cellular organisms → Bacteria506Open in IMG/M
3300006046|Ga0066652_100264788All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium1511Open in IMG/M
3300006755|Ga0079222_10194993All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes1211Open in IMG/M
3300006791|Ga0066653_10756749All Organisms → cellular organisms → Bacteria508Open in IMG/M
3300006797|Ga0066659_10424026All Organisms → cellular organisms → Bacteria → Terrabacteria group → unclassified Terrabacteria group → Terrabacteria group bacterium ANGP11051Open in IMG/M
3300006854|Ga0075425_100003032All Organisms → cellular organisms → Bacteria16958Open in IMG/M
3300006854|Ga0075425_100035324All Organisms → cellular organisms → Bacteria5567Open in IMG/M
3300006854|Ga0075425_100068340All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis3997Open in IMG/M
3300006854|Ga0075425_100098302All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium3325Open in IMG/M
3300006854|Ga0075425_100723499All Organisms → cellular organisms → Bacteria1142Open in IMG/M
3300006854|Ga0075425_100960893All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → Schlesneria → Schlesneria paludicola976Open in IMG/M
3300006854|Ga0075425_101054655All Organisms → cellular organisms → Bacteria926Open in IMG/M
3300006871|Ga0075434_100002261All Organisms → cellular organisms → Bacteria16853Open in IMG/M
3300006871|Ga0075434_100103217All Organisms → cellular organisms → Bacteria2859Open in IMG/M
3300006871|Ga0075434_100615898All Organisms → cellular organisms → Bacteria1104Open in IMG/M
3300006871|Ga0075434_100723528All Organisms → cellular organisms → Bacteria1012Open in IMG/M
3300006904|Ga0075424_100328547All Organisms → cellular organisms → Bacteria1628Open in IMG/M
3300006904|Ga0075424_100960274All Organisms → cellular organisms → Bacteria911Open in IMG/M
3300007076|Ga0075435_100216511All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Solimonas → Solimonas aquatica1625Open in IMG/M
3300007076|Ga0075435_100658108All Organisms → cellular organisms → Bacteria909Open in IMG/M
3300007255|Ga0099791_10507233All Organisms → cellular organisms → Bacteria586Open in IMG/M
3300007255|Ga0099791_10532132All Organisms → cellular organisms → Bacteria572Open in IMG/M
3300007255|Ga0099791_10580892All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium547Open in IMG/M
3300007258|Ga0099793_10048912All Organisms → cellular organisms → Bacteria1858Open in IMG/M
3300007258|Ga0099793_10114352All Organisms → cellular organisms → Bacteria1257Open in IMG/M
3300007788|Ga0099795_10138286All Organisms → cellular organisms → Bacteria989Open in IMG/M
3300009012|Ga0066710_100235430All Organisms → cellular organisms → Bacteria2638Open in IMG/M
3300009012|Ga0066710_101190969All Organisms → cellular organisms → Bacteria1180Open in IMG/M
3300009012|Ga0066710_102156809All Organisms → cellular organisms → Bacteria816Open in IMG/M
3300009012|Ga0066710_102955772All Organisms → cellular organisms → Bacteria → Terrabacteria group → unclassified Terrabacteria group → Terrabacteria group bacterium ANGP1664Open in IMG/M
3300009012|Ga0066710_103491115All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes595Open in IMG/M
3300009090|Ga0099827_10008039All Organisms → cellular organisms → Bacteria6592Open in IMG/M
3300009090|Ga0099827_10981699All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium732Open in IMG/M
3300009137|Ga0066709_100348873Not Available2033Open in IMG/M
3300009137|Ga0066709_100404951All Organisms → cellular organisms → Bacteria1894Open in IMG/M
3300009137|Ga0066709_100631888All Organisms → cellular organisms → Bacteria1530Open in IMG/M
3300009137|Ga0066709_102736839All Organisms → cellular organisms → Bacteria656Open in IMG/M
3300009137|Ga0066709_103575782All Organisms → cellular organisms → Bacteria564Open in IMG/M
3300009147|Ga0114129_11236878All Organisms → cellular organisms → Bacteria928Open in IMG/M
3300009147|Ga0114129_12152195All Organisms → cellular organisms → Bacteria672Open in IMG/M
3300009162|Ga0075423_10125080All Organisms → cellular organisms → Bacteria2697Open in IMG/M
3300010326|Ga0134065_10230904All Organisms → cellular organisms → Bacteria682Open in IMG/M
3300010333|Ga0134080_10513855All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium571Open in IMG/M
3300010333|Ga0134080_10603209All Organisms → cellular organisms → Bacteria534Open in IMG/M
3300010336|Ga0134071_10363765All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes733Open in IMG/M
3300010371|Ga0134125_12936668All Organisms → cellular organisms → Bacteria517Open in IMG/M
3300012198|Ga0137364_10052047All Organisms → cellular organisms → Bacteria2732Open in IMG/M
3300012198|Ga0137364_11109035All Organisms → cellular organisms → Bacteria595Open in IMG/M
3300012199|Ga0137383_10013589All Organisms → cellular organisms → Bacteria5520Open in IMG/M
3300012200|Ga0137382_10006706All Organisms → cellular organisms → Bacteria5840Open in IMG/M
3300012200|Ga0137382_10156287All Organisms → cellular organisms → Bacteria1549Open in IMG/M
3300012200|Ga0137382_10505239All Organisms → cellular organisms → Bacteria859Open in IMG/M
3300012200|Ga0137382_11343339All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium503Open in IMG/M
3300012202|Ga0137363_10540310All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium981Open in IMG/M
3300012202|Ga0137363_11517294All Organisms → cellular organisms → Bacteria561Open in IMG/M
3300012203|Ga0137399_10173816All Organisms → cellular organisms → Bacteria1735Open in IMG/M
3300012203|Ga0137399_10260315All Organisms → cellular organisms → Bacteria1425Open in IMG/M
3300012204|Ga0137374_10042786All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes4771Open in IMG/M
3300012204|Ga0137374_10277879All Organisms → cellular organisms → Bacteria1387Open in IMG/M
3300012204|Ga0137374_10313820All Organisms → cellular organisms → Bacteria1280Open in IMG/M
3300012204|Ga0137374_10326240All Organisms → cellular organisms → Bacteria1248Open in IMG/M
3300012206|Ga0137380_11452152All Organisms → cellular organisms → Bacteria570Open in IMG/M
3300012208|Ga0137376_10006002All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia8107Open in IMG/M
3300012208|Ga0137376_10156057All Organisms → cellular organisms → Bacteria1965Open in IMG/M
3300012208|Ga0137376_10465491All Organisms → cellular organisms → Bacteria1097Open in IMG/M
3300012208|Ga0137376_10692467All Organisms → cellular organisms → Bacteria879Open in IMG/M
3300012208|Ga0137376_10924086All Organisms → cellular organisms → Bacteria749Open in IMG/M
3300012208|Ga0137376_11253671All Organisms → cellular organisms → Bacteria631Open in IMG/M
3300012209|Ga0137379_10892908All Organisms → cellular organisms → Bacteria793Open in IMG/M
3300012210|Ga0137378_10577045All Organisms → cellular organisms → Bacteria1034Open in IMG/M
3300012210|Ga0137378_10731412All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium901Open in IMG/M
3300012210|Ga0137378_11276101All Organisms → cellular organisms → Bacteria651Open in IMG/M
3300012211|Ga0137377_10025482All Organisms → cellular organisms → Bacteria5297Open in IMG/M
3300012211|Ga0137377_10036328All Organisms → cellular organisms → Bacteria4495Open in IMG/M
3300012211|Ga0137377_10215200All Organisms → cellular organisms → Bacteria1845Open in IMG/M
3300012211|Ga0137377_10571090All Organisms → cellular organisms → Bacteria1068Open in IMG/M
3300012211|Ga0137377_10601770All Organisms → cellular organisms → Bacteria1036Open in IMG/M
3300012349|Ga0137387_10119828All Organisms → cellular organisms → Bacteria1853Open in IMG/M
3300012353|Ga0137367_10220351All Organisms → cellular organisms → Bacteria1370Open in IMG/M
3300012358|Ga0137368_10221949All Organisms → cellular organisms → Bacteria → Terrabacteria group → unclassified Terrabacteria group → Terrabacteria group bacterium ANGP11327Open in IMG/M
3300012358|Ga0137368_10582758All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium712Open in IMG/M
3300012683|Ga0137398_10642663All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium735Open in IMG/M
3300012685|Ga0137397_10011693All Organisms → cellular organisms → Bacteria6124Open in IMG/M
3300012922|Ga0137394_10270615All Organisms → cellular organisms → Bacteria1453Open in IMG/M
3300012922|Ga0137394_11580716Not Available513Open in IMG/M
3300012923|Ga0137359_10003384All Organisms → cellular organisms → Bacteria12923Open in IMG/M
3300012923|Ga0137359_10130970All Organisms → cellular organisms → Bacteria2230Open in IMG/M
3300012923|Ga0137359_11746042All Organisms → cellular organisms → Bacteria509Open in IMG/M
3300012925|Ga0137419_10485487All Organisms → cellular organisms → Bacteria979Open in IMG/M
3300012927|Ga0137416_12122963All Organisms → cellular organisms → Bacteria516Open in IMG/M
3300012930|Ga0137407_10852713All Organisms → cellular organisms → Bacteria861Open in IMG/M
3300012944|Ga0137410_11344788All Organisms → cellular organisms → Bacteria619Open in IMG/M
3300012972|Ga0134077_10273566All Organisms → cellular organisms → Bacteria704Open in IMG/M
3300014154|Ga0134075_10048265All Organisms → cellular organisms → Bacteria1754Open in IMG/M
3300014154|Ga0134075_10443716All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes576Open in IMG/M
3300014157|Ga0134078_10615637All Organisms → cellular organisms → Bacteria522Open in IMG/M
3300014166|Ga0134079_10173345All Organisms → cellular organisms → Bacteria886Open in IMG/M
3300015054|Ga0137420_1288396All Organisms → cellular organisms → Bacteria719Open in IMG/M
3300015241|Ga0137418_10557253All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium906Open in IMG/M
3300015241|Ga0137418_11170926All Organisms → cellular organisms → Bacteria543Open in IMG/M
3300015373|Ga0132257_100564680All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes1403Open in IMG/M
3300017657|Ga0134074_1084949All Organisms → cellular organisms → Bacteria1082Open in IMG/M
3300018433|Ga0066667_10312603All Organisms → cellular organisms → Bacteria1229Open in IMG/M
3300018433|Ga0066667_10490748All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes1010Open in IMG/M
3300018433|Ga0066667_11875316All Organisms → cellular organisms → Bacteria545Open in IMG/M
3300021086|Ga0179596_10371124Not Available720Open in IMG/M
3300026298|Ga0209236_1205166All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes734Open in IMG/M
3300026306|Ga0209468_1018939All Organisms → cellular organisms → Bacteria2477Open in IMG/M
3300026306|Ga0209468_1121295All Organisms → cellular organisms → Bacteria777Open in IMG/M
3300026306|Ga0209468_1193453All Organisms → cellular organisms → Bacteria515Open in IMG/M
3300026316|Ga0209155_1007261All Organisms → cellular organisms → Bacteria4920Open in IMG/M
3300026343|Ga0209159_1107420All Organisms → cellular organisms → Bacteria1203Open in IMG/M
3300026530|Ga0209807_1247681All Organisms → cellular organisms → Bacteria603Open in IMG/M
3300026552|Ga0209577_10864867All Organisms → cellular organisms → Bacteria506Open in IMG/M
3300027787|Ga0209074_10075807All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes1088Open in IMG/M
3300027857|Ga0209166_10015928All Organisms → cellular organisms → Bacteria4756Open in IMG/M
3300031199|Ga0307495_10004605All Organisms → cellular organisms → Bacteria1708Open in IMG/M
3300031226|Ga0307497_10726044All Organisms → cellular organisms → Bacteria → Proteobacteria515Open in IMG/M
3300031820|Ga0307473_10674140Not Available723Open in IMG/M
3300031965|Ga0326597_10621674All Organisms → cellular organisms → Bacteria → Acidobacteria1151Open in IMG/M


 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil40.41%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil15.75%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere12.33%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil10.96%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil6.85%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere2.74%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil2.05%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil2.05%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil1.37%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil1.37%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil1.37%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil0.68%
Sugarcane Root And Bulk SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil0.68%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil0.68%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere0.68%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300002557Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_20cmEnvironmentalOpen in IMG/M
3300002908Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cmEnvironmentalOpen in IMG/M
3300003319Sugarcane bulk soil Sample L2EnvironmentalOpen in IMG/M
3300004153Grasslands soil microbial communities from Hopland, California, USA (version 2)EnvironmentalOpen in IMG/M
3300004156Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1EnvironmentalOpen in IMG/M
3300004480Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4EnvironmentalOpen in IMG/M
3300005172Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132EnvironmentalOpen in IMG/M
3300005175Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122EnvironmentalOpen in IMG/M
3300005177Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139EnvironmentalOpen in IMG/M
3300005450Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131EnvironmentalOpen in IMG/M
3300005467Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaGEnvironmentalOpen in IMG/M
3300005518Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaGEnvironmentalOpen in IMG/M
3300005537Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1EnvironmentalOpen in IMG/M
3300005540Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146EnvironmentalOpen in IMG/M
3300005553Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144EnvironmentalOpen in IMG/M
3300005561Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148EnvironmentalOpen in IMG/M
3300005574Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143EnvironmentalOpen in IMG/M
3300005575Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151EnvironmentalOpen in IMG/M
3300005576Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157EnvironmentalOpen in IMG/M
3300005586Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140EnvironmentalOpen in IMG/M
3300005598Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155EnvironmentalOpen in IMG/M
3300005615Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaGEnvironmentalOpen in IMG/M
3300006046Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101EnvironmentalOpen in IMG/M
3300006755Agricultural soil microbial communities from Georgia to study Nitrogen management - GA PlitterEnvironmentalOpen in IMG/M
3300006791Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102EnvironmentalOpen in IMG/M
3300006797Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108EnvironmentalOpen in IMG/M
3300006854Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4Host-AssociatedOpen in IMG/M
3300006871Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3Host-AssociatedOpen in IMG/M
3300006904Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3Host-AssociatedOpen in IMG/M
3300007076Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4Host-AssociatedOpen in IMG/M
3300007255Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1EnvironmentalOpen in IMG/M
3300007258Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3EnvironmentalOpen in IMG/M
3300007788Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2EnvironmentalOpen in IMG/M
3300009012Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159EnvironmentalOpen in IMG/M
3300009090Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaGEnvironmentalOpen in IMG/M
3300009137Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158EnvironmentalOpen in IMG/M
3300009147Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)Host-AssociatedOpen in IMG/M
3300009162Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2Host-AssociatedOpen in IMG/M
3300010326Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300010333Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300010336Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015EnvironmentalOpen in IMG/M
3300010371Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1EnvironmentalOpen in IMG/M
3300012198Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012199Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaGEnvironmentalOpen in IMG/M
3300012200Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaGEnvironmentalOpen in IMG/M
3300012202Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaGEnvironmentalOpen in IMG/M
3300012203Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaGEnvironmentalOpen in IMG/M
3300012204Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaGEnvironmentalOpen in IMG/M
3300012206Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaGEnvironmentalOpen in IMG/M
3300012208Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012209Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaGEnvironmentalOpen in IMG/M
3300012210Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaGEnvironmentalOpen in IMG/M
3300012211Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaGEnvironmentalOpen in IMG/M
3300012349Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaGEnvironmentalOpen in IMG/M
3300012353Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaGEnvironmentalOpen in IMG/M
3300012358Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_100_16 metaGEnvironmentalOpen in IMG/M
3300012683Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaGEnvironmentalOpen in IMG/M
3300012685Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaGEnvironmentalOpen in IMG/M
3300012922Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaGEnvironmentalOpen in IMG/M
3300012923Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaGEnvironmentalOpen in IMG/M
3300012925Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012927Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012930Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012944Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012972Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300014154Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09212015EnvironmentalOpen in IMG/M
3300014157Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300014166Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09182015EnvironmentalOpen in IMG/M
3300015054Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300015241Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300015373Combined assembly of cpr5 rhizosphereHost-AssociatedOpen in IMG/M
3300017657Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09212015EnvironmentalOpen in IMG/M
3300018433Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116EnvironmentalOpen in IMG/M
3300021086Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300026298Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm (SPAdes)EnvironmentalOpen in IMG/M
3300026306Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102 (SPAdes)EnvironmentalOpen in IMG/M
3300026316Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122 (SPAdes)EnvironmentalOpen in IMG/M
3300026343Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144 (SPAdes)EnvironmentalOpen in IMG/M
3300026530Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154 (SPAdes)EnvironmentalOpen in IMG/M
3300026552Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)EnvironmentalOpen in IMG/M
3300027787Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter (SPAdes)EnvironmentalOpen in IMG/M
3300027857Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1 (SPAdes)EnvironmentalOpen in IMG/M
3300031199Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 7_SEnvironmentalOpen in IMG/M
3300031226Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_SEnvironmentalOpen in IMG/M
3300031820Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515EnvironmentalOpen in IMG/M
3300031965Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT100D185EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap


 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI25381J37097_106454013300002557Grasslands SoilVRFRFGDQPELMGAWASARNVLGPFKTKNEPEAGSGQTPKAA*
JGI25382J43887_1005079953300002908Grasslands SoilLDGLVRYRFGDDAELMGAWASARNVLGPFKPKNEPGAGGTQTPKAA*
soilL2_1018688723300003319Sugarcane Root And Bulk SoilAGASADLDVLGVEIKEQVQLLDGVVQYRFGDNAELMGAWHAARNIAGPVNSKNEPEAEAGGSQTPKAAHCIQS*
Ga0063455_10006247523300004153SoilRTGCSRTASTRDLKAVMRTIKAQIRVLEGLVRFRFGDQRELMGAWRSVRNVLGPFKTKNEPEAGSGQTPKAA*
Ga0062589_100001463103300004156SoilEHAGASADLEAISAEITEQVRLLDGVVQYRFGDNAELMGAWHTARNVAGPVNSKNEPDAETGGSQTPKAA*
Ga0062592_10038716323300004480SoilVVQYRFGDNAELMGAWHTARNVAGPVNSKNEPDAETGGSQTPKAA*
Ga0066683_1061198223300005172SoilYRFGDDAELMGAWASARNVLGPFKPKTEPGAGGSETPKAA*
Ga0066683_1067911413300005172SoilVRALDGMVRYRFGDNAELMGAWRSARNVLGPFKTKNEPEAGGSETPKAA*
Ga0066673_1000552423300005175SoilVGASADLVAVAAQIKSQVRALDGMVRYRFGDNAELMGAWRSARNVLGPFKTKNEPEAGGSQTPKAA*
Ga0066690_1089879513300005177SoilREIKAQIRVLDGLVRFRFGDQPELMGAWASARNVLGPFKTKNEPQGGGNQTPKAA*
Ga0066682_1002480113300005450SoilVGASADLVAVAAQIKSQVRALDGMVRYRFGDNAELMGAWRSARNVLGPFKTKNEPEAGGSETPKAA*
Ga0066682_1026117123300005450SoilDLKAVAAEIKEQVRVLDGLVRFRFGENAELMAAWASARNVLGPFKAKVEPEAGGSETPKAA*
Ga0070706_10083498413300005467Corn, Switchgrass And Miscanthus RhizosphereRFGDDAELMAAWVSAHNVLGPFKTKNEPEAGGGQTPKAA*
Ga0070699_10023259743300005518Corn, Switchgrass And Miscanthus RhizosphereVRYRFGDNEELMGAWASARSVFGPPKVHQEPAAGAETPKIVKPAA*
Ga0070699_10047893213300005518Corn, Switchgrass And Miscanthus RhizosphereVVQYRFGDDAELMGAWHSARNVAGPVKAKGGGATTPKAA*
Ga0070730_1014301633300005537Surface SoilVVAFRFGDDPELMGAWASARNVVGPSRRKQRQPPGSGGSETPKAA*
Ga0066697_1056748313300005540SoilVGASADLVAVAAQIKSQVRALDGMVRYRFGDNAELMGAWRSARNVLGPFKAKNEAEAGGSQTPKAA*
Ga0066695_1063895223300005553SoilTVAAEIKKQVRALDGMVRYRFGDNAELMGAWRSARNVLGPFKTKNEPEAGGIETPKAA*
Ga0066699_1032050313300005561SoilAQIRVLDGLVRFRFGDQPELMGAWASARNVLGPFKTKNEPEAGSGQTPKAA*
Ga0066699_1068270733300005561SoilFGDQPELMGAWASARNVLGPFKTKNVPQGGDNQTPKAA*
Ga0066694_1000501033300005574SoilMSSTLRCSGQVVGASADLQAVGAEIKKQVRALDGMVRYRFGDNAELMGAWRSARNVLGPFKTKNEPEAGGSQTPKAA*
Ga0066702_1009163133300005575SoilEIKAQIRVLDGLVRFRFGDQPELMGAWASARNVLGPFKTKNEPEAGSGQTPKAA*
Ga0066708_1096044723300005576SoilTREIKAQIRVLDGLVRFRFGDQPELMGAWASARNVLGPFKTKNEPQGGGNQTPKAA*
Ga0066691_1043162823300005586SoilAAEIAEQVKVLDGLVRYRFGDNAELMGAWAGARNVLGPFKPKTEPGASGSETPKAA*
Ga0066706_1047112213300005598SoilAELMGAWASARNVLGPFKPKTEPGTGGSETPKAA*
Ga0070702_10183893423300005615Corn, Switchgrass And Miscanthus RhizosphereGASADLKAVGVEIVKQIRALDGMVRYRFGDDAELMGAWRSARNVLGPFKTKNGSEGGGSKTPKAA*
Ga0066652_10026478813300006046SoilDDAELMGAWASARNVLGPFKPKEKGTSGAGGSQTPKAA*
Ga0079222_1019499323300006755Agricultural SoilVGASADLNAVAAEIKKQVRALDGMVRYRFGDNAELMGAWRSARNVLGPFKTKSEPQAGGGQTPKAA*
Ga0066653_1075674913300006791SoilVKVLDGLVRYRFGDDAELMGAWAGARNVLGPFKPKGEPGAGGSQTPKAA*
Ga0066659_1042402623300006797SoilLRLLDGLVRCRFGDNAELMGAWRSARNVLGPFKAKNEPEAGGSQTPKAA*
Ga0075425_100003032173300006854Populus RhizosphereMGAWRNVRNPSLRSGLAVLGPFKTKSEPEACGGQTPKAA*
Ga0075425_10003532413300006854Populus RhizosphereAAQIKVLDGLVRFRFGDDAELMGAWRSARNVLGPFKTKNGPAAGGGQTPKAA*
Ga0075425_10006834073300006854Populus RhizosphereVRYRFGDNAELMGAWRSARNVLGPFKTKSEPEAGGGQTPKAA*
Ga0075425_10009830253300006854Populus RhizosphereDGMVRYRFGDNAELMGAWRSARNVLGPFKTKSEPEAGGGQTPKAA*
Ga0075425_10072349933300006854Populus RhizosphereKQVRVLDGMVRYRFGDNAELMGAWRSARNVLGPFKTKSEPGAGAAGSQTPKAA*
Ga0075425_10096089323300006854Populus RhizosphereVVQYRFGDDAELMGAWASARNVLGPFKSKEAPGAGGQTPKAA*
Ga0075425_10105465533300006854Populus RhizosphereLDGMVRYRFGDNAELMGAWRSARNVLGPFKTKSEPEAGGGQTPKAA*
Ga0075434_10000226143300006871Populus RhizosphereMGAWRNARNPSLRSGLAVLGPFKTKSEPEACGGQTPKAA*
Ga0075434_10010321743300006871Populus RhizosphereALDGMVRYRFGDNAELMGAWRSARNVLGPFKTKSEPEAGGQTPKAA*
Ga0075434_10061589813300006871Populus RhizosphereLDGMVRYRFGDNAELMGAWRSARNVLGPFKTKSEPGAGAAGSQTPKAA*
Ga0075434_10072352813300006871Populus RhizosphereALDGMVRYRFGDNAELMGAWRSARNVLGPFKTKSEPEAGGGQTPKAA*
Ga0075424_10032854713300006904Populus RhizosphereGDNAELMGAWRSARNVLGPFKTKSEPEAGGQTPKAA*
Ga0075424_10096027413300006904Populus RhizosphereRYRFGDNAELMGAWRSARNVLGPFKTKSEPEAGGGQTPKAA*
Ga0075435_10021651133300007076Populus RhizosphereKVLDGLVRFRFGDDAELMGAWRSARNVLGPFKTKNGPAAGGGQTPKAA*
Ga0075435_10065810833300007076Populus RhizosphereYRFGDNAELMGAWRSARNVLGPFKTKSEPEAGGGQTPKAA*
Ga0099791_1050723313300007255Vadose Zone SoilRFGENAELMAAWASARNVLGPFKAKVVPEAGGSETPKAA*
Ga0099791_1053213223300007255Vadose Zone SoilETSREGRRGHAGASADLEIVAAEIKEQIRVLDGLVRFRFGDDGQLMGAWRSARNVLGPFKTKNEPGAGGGQTPKAA*
Ga0099791_1058089213300007255Vadose Zone SoilRFGDDAELMGAWASARNVLGPFKPKGQAAGEGGSQTPKAA*
Ga0099793_1004891243300007258Vadose Zone SoilLDGLVRYRFGENAELMGAWGSARNVLGPFKTKNEPEAGGSQTPKAA*
Ga0099793_1011435223300007258Vadose Zone SoilQYQFGDDAELMGAWASARNVLGPFKPKDQQSGGGGSQTPKAA*
Ga0099795_1013828613300007788Vadose Zone SoilDGMVRYRFGDNAELMGAWRSARNVLGPFRSKNGPESGAGGSQTPKAA*
Ga0066710_10023543033300009012Grasslands SoilLDGMVRYRFGDNAELMGAWRSARNVLGPFKTKNEPEAGGSQTPKAA
Ga0066710_10119096923300009012Grasslands SoilLLDGVVQYRFGDDAELMGAWASVRNVLGPFKPKEQQPPGAGGSQTPKAA
Ga0066710_10215680923300009012Grasslands SoilVRALDGMVRYRFGDNAELMGAWRSARNVLGPFKAKNEPEAGGSQTPKAA
Ga0066710_10295577223300009012Grasslands SoilLRLLDGLVRCRFGDNAELMGAWRSARNVLGPFKAKNEPEAGGSQTPKAA
Ga0066710_10349111513300009012Grasslands SoilVAAEIKKPVRALDGMVRYRFGDNAELMGAWRSARNVLGPFKTKNEPEAGGSQ
Ga0099827_1000803913300009090Vadose Zone SoilSADLNAVAAEIKKQVRALDGMVRYRFGDNAELMGAWRSARNVLGPFKTKNDPEAGGSQTPNAA*
Ga0099827_1098169923300009090Vadose Zone SoilGDNAELMGAWASARNVLGLFKPKGEPGAGGSETPKAA*
Ga0066709_10034887333300009137Grasslands SoilALDGMVRYRFGDNAELMGAWHSARNVLGPFKTKNEPEAGGSQTPKAA*
Ga0066709_10040495113300009137Grasslands SoilDNAELMGAWRSARNVLGPFKTKNEPEAGGSQTPKAA*
Ga0066709_10063188823300009137Grasslands SoilLRLLDGLVRCRFGDNAELMGARRSARNVLGPFKAKNEPEAGGSQTPKAA*
Ga0066709_10273683923300009137Grasslands SoilVGASADLQAVGAEIKKQVRALDGMVRYRFGDNAELMGAWRSARNVLGPFKTKNEPEAGGSQTPKAA*
Ga0066709_10357578223300009137Grasslands SoilVAAEIKKQVRALDGMVRYRFGDNAELMGAWRSARNLLGPFKTKNEPEAGGSQTPKAA*
Ga0114129_1123687813300009147Populus RhizosphereQVRALDGMVRYRFGDNAELMGAWRSARNVFGPFRSKPEPESPAGGNPTPKAA*
Ga0114129_1215219523300009147Populus RhizosphereAAEIKKQVRALDGMVRYRFGDNAELMGAWRSARNVLGPFKTKSEPEAGGGQTPKAA*
Ga0075423_1012508013300009162Populus RhizosphereRFGDNAELMGAWRSARNVLGPFKTKSEPEAGGGQTPKAA*
Ga0134065_1023090423300010326Grasslands SoilYRFGDNAELMGAWRSARNVLGPFKTKNEPEAGGSETPKAA*
Ga0134080_1051385513300010333Grasslands SoilMVRYRFGDNAELMGAWHSARNVLGPFKTKNEPEAGGSQTPKAA*
Ga0134080_1060320923300010333Grasslands SoilAEIKKQVRALDGMVRYRFGDNAELMGAWRSARNVLGPFKTKNEPEAGGSQTPKAA*
Ga0134071_1036376513300010336Grasslands SoilLQTAAREIVKHVRVLDGLVRYRSGDNAELMGAWASARNVLGPFKTKNEPEAGGTQTPKAA
Ga0134125_1293666813300010371Terrestrial SoilGLVRYRFGDNPALMEGWASARDVLGPFRSKVQQQEPEAGGGQTPRAA*
Ga0137364_1005204723300012198Vadose Zone SoilVKVLDGLMRYRFGENAELMGAWASARNVLGPFKLKDKPEAGGSQTPKAA*
Ga0137364_1110903513300012198Vadose Zone SoilSQVRALDGMVRYRFGDNAELMGAWRSSRNVLGPFKTKNEPEAGGSQTPKAA*
Ga0137383_1001358983300012199Vadose Zone SoilVRALDGLVRYRFGDNAELMGAWASARNVLGPFKPKDKPEAGGSQPKAA*
Ga0137382_1000670613300012200Vadose Zone SoilEIKKQVRALDGMVRYRFGDNAELMGAWHSARNVLGPFKTKNEPEAGGSQTPKAA*
Ga0137382_1015628723300012200Vadose Zone SoilVRYRFGDNAELMGAWAGARNVLGPFKPKTEPGAGGSETPKAA*
Ga0137382_1050523923300012200Vadose Zone SoilVGASADLKAVAAEIKKQVRALDGMVRYRFGDNAELMDAWRSARNVLGPFKTKNEPEAGGSQTPKAA*
Ga0137382_1134333923300012200Vadose Zone SoilAAEIKKQVRALDGMVRYRFGDNAELMGAWRSARNVLGPFKTKNEPEAGGSQPKAA*
Ga0137363_1054031013300012202Vadose Zone SoilVGQRARKPSLRSGQAVLGPFKPKDKPEAGGSQTPKAA
Ga0137363_1151729413300012202Vadose Zone SoilEVSEQVKVLDGVVRYRFGDNAELMGAWRSARNVLGPFKTKNAPEAGGSQTPKAA*
Ga0137399_1017381613300012203Vadose Zone SoilNAELMGAWTSARNVLGPFKPKAEPGAGGSQTPKAA*
Ga0137399_1026031533300012203Vadose Zone SoilDGVVQYRFGDDAELMGAWHSARNVVGPFKPKEQAPGEGGGQTPKAA*
Ga0137374_10042198113300012204Vadose Zone SoilAAGIAEQVRVLDGLVRCRFGDNAELMGAWASARNVLGPFKPKNEPGACGSETPKAA*
Ga0137374_1004278623300012204Vadose Zone SoilVAAEIAEQVKVLDGLVRYRFGDDAELMGAWASARNVLGPSKANGDPEAGGGETPKAA*
Ga0137374_1027787923300012204Vadose Zone SoilVGASADLQSVAAEIKKQVRALDGMVRYRFGDNAELMGAWRSARNVLGPFKAKNEPEAGGSQPKAA*
Ga0137374_1031382023300012204Vadose Zone SoilFGDNAELMGAWRSARNVLGPFKPKGEPGAGGSQTPKAA*
Ga0137374_1032624033300012204Vadose Zone SoilRFGDNAELMGAWASARNLLGPFKPKGESGAGSSQAPKAA*
Ga0137380_1145215223300012206Vadose Zone SoilRSPSRVRALDGLVRYRFGDNAELMGAWASARNVLGPFKPRDKPEAGGSQPKAA*
Ga0137376_10006002103300012208Vadose Zone SoilLDGMVRYRFGDNAELMGAWRSARNVLGPFKTKNEPEAGGGQTPKAA*
Ga0137376_1015605713300012208Vadose Zone SoilVLDGLVRYRFGDDAELMGAWASARNVLGPFKTKNEPEAGGSQTPKAA*
Ga0137376_1046549123300012208Vadose Zone SoilMGVWISARNVVGPFKPKDQETRGAAGAAGSQTPKAA*
Ga0137376_1069246713300012208Vadose Zone SoilDNPALMEGWSSARDVLGPFRSKVQQQEPEAGGGSGQRPKAA*
Ga0137376_1092408613300012208Vadose Zone SoilMVRYRFGDNAEMMGAWRSAPNVLGPLKTKNEAEAGGSQPKAA*
Ga0137376_1125367123300012208Vadose Zone SoilMAVPRRELMGAWASARNVLGPFKPKAQTPGEGGSQTPQAA*
Ga0137379_1089290813300012209Vadose Zone SoilTIKAQIRVLEGLVRFRFGDQPELMGAWRSVRNVLGPFKTKNAPGAGGSQTPKAA*
Ga0137378_1057704523300012210Vadose Zone SoilDGMVRYRFGDSAELMGAWRSARNVLGPFKTKIEPEAGGSQTPKAA*
Ga0137378_1073141233300012210Vadose Zone SoilRYRFGDNAELMGAWRSARNVLGPFKTKNEPEAGGSQTPKAA*
Ga0137378_1127610113300012210Vadose Zone SoilADLWAVAAEITEQLKVLDGLVRYRFGDSAELMGAWHSARNVLGPFKTKNEPEAGGSQTPKAA*
Ga0137377_1002548213300012211Vadose Zone SoilMLDGLVRYRFGDNPALMEGWSSARDVLGPFRSKVQQEPESQAGGSQTPKAA*
Ga0137377_1003632873300012211Vadose Zone SoilVGASADLQTVAAEIKKQVRALDGMVRYRFGDSAELMGAWRSARNVLGPFKTKIEPEAGGSQTPKAA*
Ga0137377_1021520033300012211Vadose Zone SoilVGASADLQTVAAEIKKQVRALDGMVRYRFGDSAELMGAWRSARNVLGPFKPKNEPEAGGSQTPKAA*
Ga0137377_1057109023300012211Vadose Zone SoilGLVRYRFGENAELMGAWASARNVEGPFRVEGQAAGG*
Ga0137377_1060177023300012211Vadose Zone SoilVGASADLQTVAAEIKKQVRALDGMVRYRFGDNAELMGAWRSARNVLGPFKTKNEPEAGGSETPKAA*
Ga0137387_1011982813300012349Vadose Zone SoilALDGMVRYRFGDNAELMGAWRSARNVLGPFKTKNEPEAGGSQTPKAA*
Ga0137367_1022035113300012353Vadose Zone SoilAELMGAWASARNVLGPFKANGDPEAGGGETPKAA*
Ga0137368_1022194923300012358Vadose Zone SoilVAAEIAEQVKVLDGLVRYRFGDDAELMGAWASARNVLGPFKANGDPEAGGGETPKAA*
Ga0137368_1058275823300012358Vadose Zone SoilADLQAVAAQIKSQVRALDGMVRYRFGDNAELMGAWRSARNVLGPFKAKNEPEAGGSQPKAA*
Ga0137398_1064266313300012683Vadose Zone SoilDLEAVAAEIKKQVRALDGMVRYRFGDNAELMGAWRSARNVLGPFKTKSEPGAGGSQTPKAA*
Ga0137397_1001169343300012685Vadose Zone SoilMPHDEEWNLLDGLVRFRFGENRELMGAWASARNVLGPFKTKNAPEAGGSQPKAA*
Ga0137394_1027061523300012922Vadose Zone SoilVLDGLVRYRFGDNAELMGAWASARNVLGPFKPKGEPGAGGNETPKAA*
Ga0137394_1158071613300012922Vadose Zone SoilQPASLHTDGKDHAELMGAWASARNPSLRSEQAVLGPFKPKDKPEAGGSQTPKAA*
Ga0137359_10003384143300012923Vadose Zone SoilVLDGLVRYRFGDNAELMGAWASARNVLGPFKTKNAPEAGRSQTPKAA*
Ga0137359_1013097033300012923Vadose Zone SoilVRVLDGLVRYRFGDDAELMGAWASARNVLGPFKAKNEPQAGGSQTTKAA*
Ga0137359_1174604223300012923Vadose Zone SoilGMVRYRFGDNAELMGAWRSARNVLGPFKTKNEPGAGGSQTPKAA*
Ga0137419_1048548733300012925Vadose Zone SoilVGATADLGAVAAEIAEQVKVLDGLVRYRFGENAELMGAWASARNVLGPFKTKNAPGAGGSQTPKAA*
Ga0137416_1212296313300012927Vadose Zone SoilSAELMGAWGSARNVLGPFKAKNAPDAGGSQTPKAA*
Ga0137407_1085271313300012930Vadose Zone SoilGADLKAVAAEIKEQVRVLDGLVRFRFGENAELMAAWASARNVLGPFKPKVEPEAGGSETPKAA*
Ga0137410_1134478813300012944Vadose Zone SoilNLLEGLVRYRFGDNAELMCAWAGARNVLGPFKPKGEPGAGGSQPKAA*
Ga0134077_1027356623300012972Grasslands SoilVAAEVAEQVRVLDGLVRYRFGDDAELMGAWASARNVLGPFKPKTEPGTGGSETPKAA*
Ga0134075_1004826513300014154Grasslands SoilQVVGASADLQTVAAEIKKQVRALDGMVRYRFGDNAELMGAWRSARNVLGPFKTKNEPEAGGSQPKAA*
Ga0134075_1044371623300014154Grasslands SoilRFGDNPALMEGWSSARDVLGPFRSKVQQEPESPAGGSQTPKAA*
Ga0134078_1061563713300014157Grasslands SoilVLDGLVRFRFGDQPELMGAWASARNVLGPFKTKNEPEAGSGNTPKAA*
Ga0134079_1017334533300014166Grasslands SoilQIRVLDGLVRFRFGDQPELMGAWASARNVLGPFKTKNEPEAGSGSTPKAA*
Ga0137420_128839623300015054Vadose Zone SoilVRYRFGDNTELMGAWASARNVLGPFKPQAEPGAGGSQTPKAA*
Ga0137418_1055725313300015241Vadose Zone SoilGDQPELMGAWASARNVLGPFKTKNAPEAGGSQPKAA*
Ga0137418_1117092633300015241Vadose Zone SoilLDGLARFRFGDNAELMGAWASARNVLGPFKPKGEPGAGGSETPKAS*
Ga0132257_10056468043300015373Arabidopsis RhizosphereAELMGAWASARNVMGPSIPKEQHQEPGTGGSQTPKAA*
Ga0134074_108494913300017657Grasslands SoilNAELMGAWRSARNVLGPFKTKNEPEAGGGQTPKAA
Ga0066667_1031260323300018433Grasslands SoilVGASADLVAVAAQIKSQVRALDGMVRYRFGDNAELMGAWRSARNVLGPFKTKNEPEAGGSETPKAA
Ga0066667_1049074813300018433Grasslands SoilMKVLDGLVRYRFGDDAELMGAWASARNVLGPFKTRNAPEAGGTQTPKAA
Ga0066667_1187531613300018433Grasslands SoilGLVRYRFGDNPALMEGWSSARDVLGPFRSKVQQEPGSPAGGSETPKAA
Ga0179596_1037112413300021086Vadose Zone SoilDNAELMAAWDSARNVPGPFKTKNVPQSDRGGSQTPKAA
Ga0209236_120516623300026298Grasslands SoilVAAEIKKQVRALDGMVRYRFGDNAELMGAWRSARNVLGPFKTKNEPEAGGSQPKAA
Ga0209468_101893913300026306SoilGKAPSSIDVELMGAWRSARNVLGPFKTKNEPEAGGIETPKAA
Ga0209468_112129533300026306SoilRVLDGLVRFRFGDQPELMGAWASARNVLGPFKTKNEPEAGSGSTPKAA
Ga0209468_119345313300026306SoilVLDGLVRYRFGDDAELMGAWAGARNVLGPFKPKGEPGAGGSQTPKAA
Ga0209155_100726153300026316SoilVGASADLVAVAAQIKSQVRALDGMVRYRFGDNAELMGAWRSARNVLGPFKTKNEPQGGGNQTPKAA
Ga0209159_110742013300026343SoilIDVELMGAWRSARNVLGPFKTKNEPEAGGIETPKAA
Ga0209807_124768113300026530SoilRALDGMVRYRFGDNPELMGAWRSARNVLGPFRSKSEPQAGAGGSQTPKAA
Ga0209577_1086486723300026552SoilVRFRFGDQPELMGAWASARNVLGPFKTKNEPEAGSGQTPKAA
Ga0209074_1007580713300027787Agricultural SoilVGASADLNAVAAEIKKQVRALDGMVRYRFGDNAELMGAWRSARNVLGPFKTKSEPQAGGGQTPKAA
Ga0209166_1001592853300027857Surface SoilDGMVRYRFGDNPELMGAWRSARNVLGPFKTKSEPEPGAGGSQTPKAA
Ga0307495_1000460523300031199SoilGAVARRVVQYRFGDDAELMGAWASARNVLGPFKPKEQAPGEGGSETPKAA
Ga0307497_1072604413300031226SoilDGLVRYRFGDNPALMEGWASARDVLGPFRSKAQQEPEAGGSETPKAA
Ga0307473_1067414013300031820Hardwood Forest SoilLDGMVRYRFGDNAELMGAWRSARNVLGPFKTKSEPEAGGGQTPKAA
Ga0326597_1062167413300031965SoilLVRFRFGENAELMGAWASARNVLGPFKAKVEPEAGGSETPKAA

 ⦗Top⦘


Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.