Metagenome / Metatranscriptome Family F049741

Basic Information
Family ID	F049741
Family Type	Metagenome / Metatranscriptome
Number of Sequences	146
Average Sequence Length	99 residues
Representative Sequence	MPATTEAEAPLLKLETQLWKSRAEAKQKWLERALAQPVRNPRERERRTMWIKRALEAVQRGQDDIKYQTALMDAYAEHLTVLEMRLIQASEEKRGAPD
Number of Associated Samples	119
Number of Associated Scaffolds	146

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	68.28 %
% of genes near scaffold ends (potentially truncated)	39.73 %
% of genes from short scaffolds (< 2000 bps)	83.56 %
Associated GOLD sequencing projects	105
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.59

Most Common Taxonomy
Group	Bacteria (80.137 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere (10.274 % of family members)
Environment Ontology (ENVO)	Unclassified (32.877 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (63.014 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 65.87% β-sheet: 0.00% Coil/Unstructured: 34.13%
Feature Viewer

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Pfam ID	Name	% Frequency in 146 Family Scaffolds
PF00578	AhpC-TSA	34.93
PF08534	Redoxin	17.81
PF03372	Exo_endo_phos	4.11
PF08281	Sigma70_r4_2	2.05
PF03965	Penicillinase_R	0.68
PF13905	Thioredoxin_8	0.68
PF02954	HTH_8	0.68
PF02630	SCO1-SenC	0.68

COG ID	Name	Functional Category	% Frequency in 146 Family Scaffolds
COG1225	Peroxiredoxin	Posttranslational modification, protein turnover, chaperones [O]	0.68
COG1846	DNA-binding transcriptional regulator, MarR family	Transcription [K]	0.68
COG1999	Cytochrome oxidase Cu insertion factor, SCO1/SenC/PrrC family	Posttranslational modification, protein turnover, chaperones [O]	0.68
COG3682	Transcriptional regulator, CopY/TcrY family	Transcription [K]	0.68

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	80.14 %
Unclassified	root	N/A	19.86 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	80.14 %
Unclassified	root	N/A	19.86 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	80.14 %
Unclassified	root	N/A	19.86 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	60.27 %
Unclassified	root	N/A	19.86 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	23.29 %
Unclassified	root	N/A	19.86 %
Vicinamibacteria	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria	1.37 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	23.29 %
Unclassified	root	N/A	19.86 %
Vicinamibacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales	1.37 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	23.29 %
Unclassified	root	N/A	19.86 %
Vicinamibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae	1.37 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	23.29 %
Unclassified	root	N/A	19.86 %
Luteitalea	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea	1.37 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	23.29 %
Unclassified	root	N/A	19.86 %
Luteitalea pratensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	1.37 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2162886007\|SwRhRL2b_contig_2170623	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1110	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_105889915	All Organisms → cellular organisms → Bacteria → Acidobacteria	678	Open in IMG/M
3300000443\|F12B_10317885	All Organisms → cellular organisms → Bacteria → Acidobacteria	1747	Open in IMG/M
3300003267\|soilL1_10018086	All Organisms → cellular organisms → Bacteria	5190	Open in IMG/M
3300003321\|soilH1_10266873	All Organisms → cellular organisms → Bacteria → Acidobacteria	1555	Open in IMG/M
3300004019\|Ga0055439_10067406	Not Available	1006	Open in IMG/M
3300004114\|Ga0062593_100061912	All Organisms → cellular organisms → Bacteria	2414	Open in IMG/M
3300004114\|Ga0062593_100228549	All Organisms → cellular organisms → Bacteria	1514	Open in IMG/M
3300004114\|Ga0062593_102526502	All Organisms → cellular organisms → Bacteria → Acidobacteria	582	Open in IMG/M
3300004114\|Ga0062593_102622881	All Organisms → cellular organisms → Bacteria → Acidobacteria	573	Open in IMG/M
3300004156\|Ga0062589_100521654	All Organisms → cellular organisms → Bacteria → Acidobacteria	1008	Open in IMG/M
3300004267\|Ga0066396_10022849	All Organisms → cellular organisms → Bacteria	858	Open in IMG/M
3300004479\|Ga0062595_100767607	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	788	Open in IMG/M
3300004643\|Ga0062591_102343378	Not Available	558	Open in IMG/M
3300004785\|Ga0058858_1397453	All Organisms → cellular organisms → Bacteria → Acidobacteria	734	Open in IMG/M
3300004801\|Ga0058860_12176659	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	887	Open in IMG/M
3300005093\|Ga0062594_100307659	Not Available	1211	Open in IMG/M
3300005289\|Ga0065704_10010557	All Organisms → cellular organisms → Bacteria	1788	Open in IMG/M
3300005294\|Ga0065705_10197357	All Organisms → cellular organisms → Bacteria	1454	Open in IMG/M
3300005329\|Ga0070683_102242998	All Organisms → cellular organisms → Bacteria → Acidobacteria	524	Open in IMG/M
3300005331\|Ga0070670_100390774	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1227	Open in IMG/M
3300005332\|Ga0066388_100725754	All Organisms → cellular organisms → Bacteria → Acidobacteria	1597	Open in IMG/M
3300005332\|Ga0066388_101100072	Not Available	1345	Open in IMG/M
3300005332\|Ga0066388_107575737	All Organisms → cellular organisms → Bacteria → Acidobacteria	544	Open in IMG/M
3300005338\|Ga0068868_101337433	Not Available	666	Open in IMG/M
3300005340\|Ga0070689_101198095	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	681	Open in IMG/M
3300005343\|Ga0070687_100446598	All Organisms → cellular organisms → Bacteria	859	Open in IMG/M
3300005344\|Ga0070661_100086864	All Organisms → cellular organisms → Bacteria	2313	Open in IMG/M
3300005345\|Ga0070692_10184990	All Organisms → cellular organisms → Bacteria → Acidobacteria	1210	Open in IMG/M
3300005355\|Ga0070671_100245239	Not Available	1521	Open in IMG/M
3300005364\|Ga0070673_100007303	All Organisms → cellular organisms → Bacteria	7274	Open in IMG/M
3300005364\|Ga0070673_100298585	All Organisms → cellular organisms → Bacteria	1417	Open in IMG/M
3300005406\|Ga0070703_10114791	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	969	Open in IMG/M
3300005436\|Ga0070713_100139399	All Organisms → cellular organisms → Bacteria	2147	Open in IMG/M
3300005438\|Ga0070701_10199709	Not Available	1181	Open in IMG/M
3300005439\|Ga0070711_101614028	Not Available	567	Open in IMG/M
3300005440\|Ga0070705_100579609	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	865	Open in IMG/M
3300005441\|Ga0070700_100073483	All Organisms → cellular organisms → Bacteria	2189	Open in IMG/M
3300005455\|Ga0070663_101442065	All Organisms → cellular organisms → Bacteria → Acidobacteria	611	Open in IMG/M
3300005466\|Ga0070685_10590809	Not Available	798	Open in IMG/M
3300005530\|Ga0070679_102047078	Not Available	522	Open in IMG/M
3300005543\|Ga0070672_101513817	Not Available	601	Open in IMG/M
3300005545\|Ga0070695_101553352	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	552	Open in IMG/M
3300005549\|Ga0070704_100859612	Not Available	814	Open in IMG/M
3300005564\|Ga0070664_100329050	All Organisms → cellular organisms → Bacteria	1386	Open in IMG/M
3300005578\|Ga0068854_100148685	All Organisms → cellular organisms → Bacteria	1804	Open in IMG/M
3300005713\|Ga0066905_100215304	All Organisms → cellular organisms → Bacteria	1448	Open in IMG/M
3300005713\|Ga0066905_101692790	All Organisms → cellular organisms → Bacteria → Acidobacteria	581	Open in IMG/M
3300005713\|Ga0066905_101951435	Not Available	544	Open in IMG/M
3300005764\|Ga0066903_100588148	All Organisms → cellular organisms → Bacteria → Acidobacteria	1924	Open in IMG/M
3300005764\|Ga0066903_100749736	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1734	Open in IMG/M
3300005764\|Ga0066903_101513607	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1268	Open in IMG/M
3300005764\|Ga0066903_106787910	All Organisms → cellular organisms → Bacteria → Acidobacteria	595	Open in IMG/M
3300005841\|Ga0068863_101323580	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	727	Open in IMG/M
3300005842\|Ga0068858_100843136	Not Available	895	Open in IMG/M
3300005844\|Ga0068862_101852506	All Organisms → cellular organisms → Bacteria → Acidobacteria	613	Open in IMG/M
3300005937\|Ga0081455_10333493	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1076	Open in IMG/M
3300006196\|Ga0075422_10356285	All Organisms → cellular organisms → Bacteria	638	Open in IMG/M
3300006196\|Ga0075422_10408614	All Organisms → cellular organisms → Bacteria → Acidobacteria	602	Open in IMG/M
3300006237\|Ga0097621_100564570	All Organisms → cellular organisms → Bacteria	1037	Open in IMG/M
3300006237\|Ga0097621_100988988	Not Available	786	Open in IMG/M
3300006844\|Ga0075428_100009521	All Organisms → cellular organisms → Bacteria	10787	Open in IMG/M
3300006844\|Ga0075428_101144342	All Organisms → cellular organisms → Bacteria	821	Open in IMG/M
3300006852\|Ga0075433_10185510	All Organisms → cellular organisms → Bacteria → Acidobacteria	1851	Open in IMG/M
3300006854\|Ga0075425_101417082	All Organisms → cellular organisms → Bacteria	786	Open in IMG/M
3300006854\|Ga0075425_102276848	All Organisms → cellular organisms → Bacteria → Acidobacteria	603	Open in IMG/M
3300006880\|Ga0075429_101644195	Not Available	558	Open in IMG/M
3300006904\|Ga0075424_101067169	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	861	Open in IMG/M
3300006954\|Ga0079219_10278823	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1018	Open in IMG/M
3300007076\|Ga0075435_100161955	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1885	Open in IMG/M
3300009094\|Ga0111539_10842209	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1067	Open in IMG/M
3300009094\|Ga0111539_11321210	All Organisms → cellular organisms → Bacteria → Acidobacteria	837	Open in IMG/M
3300009100\|Ga0075418_10000791	All Organisms → cellular organisms → Bacteria	34406	Open in IMG/M
3300009147\|Ga0114129_11082591	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1004	Open in IMG/M
3300009174\|Ga0105241_12072485	All Organisms → cellular organisms → Bacteria → Acidobacteria	561	Open in IMG/M
3300009545\|Ga0105237_11215046	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	760	Open in IMG/M
3300010043\|Ga0126380_10699683	Not Available	815	Open in IMG/M
3300010047\|Ga0126382_10444523	All Organisms → cellular organisms → Bacteria → Acidobacteria	1025	Open in IMG/M
3300010360\|Ga0126372_10451358	All Organisms → cellular organisms → Bacteria → Acidobacteria	1192	Open in IMG/M
3300010362\|Ga0126377_10065000	All Organisms → cellular organisms → Bacteria → Acidobacteria	3225	Open in IMG/M
3300010362\|Ga0126377_11724025	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	701	Open in IMG/M
3300010375\|Ga0105239_11332069	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	828	Open in IMG/M
3300010398\|Ga0126383_10983690	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	932	Open in IMG/M
3300010399\|Ga0134127_10016537	All Organisms → cellular organisms → Bacteria	5624	Open in IMG/M
3300012482\|Ga0157318_1016211	All Organisms → cellular organisms → Bacteria → Acidobacteria	617	Open in IMG/M
3300012484\|Ga0157333_1012046	All Organisms → cellular organisms → Bacteria → Acidobacteria	660	Open in IMG/M
3300012948\|Ga0126375_10005203	All Organisms → cellular organisms → Bacteria → Acidobacteria	4948	Open in IMG/M
3300012958\|Ga0164299_10665778	All Organisms → cellular organisms → Bacteria → Acidobacteria	722	Open in IMG/M
3300013296\|Ga0157374_10071681	All Organisms → cellular organisms → Bacteria	3267	Open in IMG/M
3300013308\|Ga0157375_10003621	All Organisms → cellular organisms → Bacteria → Acidobacteria	13399	Open in IMG/M
3300014325\|Ga0163163_12409335	Not Available	585	Open in IMG/M
3300014326\|Ga0157380_10127197	All Organisms → cellular organisms → Bacteria	2168	Open in IMG/M
3300014745\|Ga0157377_10503949	Not Available	846	Open in IMG/M
3300014969\|Ga0157376_11399052	All Organisms → cellular organisms → Bacteria	731	Open in IMG/M
3300015372\|Ga0132256_100250007	All Organisms → cellular organisms → Bacteria	1841	Open in IMG/M
3300015373\|Ga0132257_100393461	All Organisms → cellular organisms → Bacteria → Acidobacteria	1683	Open in IMG/M
3300015373\|Ga0132257_100397743	All Organisms → cellular organisms → Bacteria	1674	Open in IMG/M
3300015373\|Ga0132257_101267631	All Organisms → cellular organisms → Bacteria → Acidobacteria	935	Open in IMG/M
3300015374\|Ga0132255_100068111	All Organisms → cellular organisms → Bacteria → Acidobacteria	4716	Open in IMG/M
3300017966\|Ga0187776_10490723	Not Available	838	Open in IMG/M
3300019362\|Ga0173479_10734335	All Organisms → cellular organisms → Bacteria → Acidobacteria	537	Open in IMG/M
3300021445\|Ga0182009_10013856	All Organisms → cellular organisms → Bacteria	2883	Open in IMG/M
3300023263\|Ga0247800_1140567	All Organisms → cellular organisms → Bacteria → Acidobacteria	515	Open in IMG/M
3300025315\|Ga0207697_10393751	All Organisms → cellular organisms → Bacteria → Acidobacteria	615	Open in IMG/M
3300025885\|Ga0207653_10209151	Not Available	738	Open in IMG/M
3300025893\|Ga0207682_10027442	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	2267	Open in IMG/M
3300025903\|Ga0207680_10394693	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	977	Open in IMG/M
3300025903\|Ga0207680_10827131	Not Available	664	Open in IMG/M
3300025917\|Ga0207660_10252399	All Organisms → cellular organisms → Bacteria → Acidobacteria	1392	Open in IMG/M
3300025925\|Ga0207650_10026085	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	4166	Open in IMG/M
3300025925\|Ga0207650_11132110	All Organisms → cellular organisms → Bacteria → Acidobacteria	666	Open in IMG/M
3300025926\|Ga0207659_10001354	All Organisms → cellular organisms → Bacteria	14629	Open in IMG/M
3300025928\|Ga0207700_10132269	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2039	Open in IMG/M
3300025936\|Ga0207670_11114078	Not Available	667	Open in IMG/M
3300025942\|Ga0207689_10365704	All Organisms → cellular organisms → Bacteria → Acidobacteria	1200	Open in IMG/M
3300025945\|Ga0207679_11452758	All Organisms → cellular organisms → Bacteria → Acidobacteria	629	Open in IMG/M
3300025960\|Ga0207651_11397104	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	630	Open in IMG/M
3300025981\|Ga0207640_10457567	Not Available	1053	Open in IMG/M
3300026023\|Ga0207677_10972151	All Organisms → cellular organisms → Bacteria → Acidobacteria	769	Open in IMG/M
3300026067\|Ga0207678_10646515	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	929	Open in IMG/M
3300026075\|Ga0207708_10077354	All Organisms → cellular organisms → Bacteria → Acidobacteria	2553	Open in IMG/M
3300026088\|Ga0207641_10208979	All Organisms → cellular organisms → Bacteria → Acidobacteria	1804	Open in IMG/M
3300026088\|Ga0207641_10956039	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	852	Open in IMG/M
3300026088\|Ga0207641_12246665	All Organisms → cellular organisms → Bacteria → Acidobacteria	545	Open in IMG/M
3300026095\|Ga0207676_11726038	Not Available	624	Open in IMG/M
3300026121\|Ga0207683_10081554	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2871	Open in IMG/M
3300027717\|Ga0209998_10098043	All Organisms → cellular organisms → Bacteria → Acidobacteria	724	Open in IMG/M
3300027775\|Ga0209177_10194380	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	718	Open in IMG/M
3300027876\|Ga0209974_10240643	All Organisms → cellular organisms → Bacteria → Acidobacteria	679	Open in IMG/M
3300027907\|Ga0207428_10569025	All Organisms → cellular organisms → Bacteria → Acidobacteria	818	Open in IMG/M
3300031562\|Ga0310886_10849301	All Organisms → cellular organisms → Bacteria → Acidobacteria	578	Open in IMG/M
3300031716\|Ga0310813_11879825	All Organisms → cellular organisms → Bacteria → Acidobacteria	563	Open in IMG/M
3300031720\|Ga0307469_11640268	All Organisms → cellular organisms → Bacteria → Acidobacteria	619	Open in IMG/M
3300031720\|Ga0307469_11966036	Not Available	567	Open in IMG/M
3300031740\|Ga0307468_100115379	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1638	Open in IMG/M
3300031740\|Ga0307468_101329388	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	656	Open in IMG/M
3300031820\|Ga0307473_11307395	All Organisms → cellular organisms → Bacteria → Acidobacteria	543	Open in IMG/M
3300031890\|Ga0306925_12233810	Not Available	508	Open in IMG/M
3300031943\|Ga0310885_10031486	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2073	Open in IMG/M
3300032012\|Ga0310902_11043837	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	569	Open in IMG/M
3300032013\|Ga0310906_10555574	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	785	Open in IMG/M
3300032205\|Ga0307472_100909227	All Organisms → cellular organisms → Bacteria → Acidobacteria	816	Open in IMG/M
3300033004\|Ga0335084_10498270	All Organisms → cellular organisms → Bacteria → Acidobacteria	1251	Open in IMG/M
3300033004\|Ga0335084_11657696	Not Available	629	Open in IMG/M
3300033412\|Ga0310810_11090212	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	666	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	52.05%
Host-Associated	Host-Associated	47.95%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	51.37%
Plants	Host-Associated → Plants	46.58%
Human	Host-Associated → Human	1.37%
Aquatic	Environmental → Aquatic	0.68%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	51.37%
Rhizosphere	Host-Associated → Plants → Rhizosphere	28.08%
Rhizoplane	Host-Associated → Plants → Rhizoplane	16.44%
Roots	Host-Associated → Plants → Roots	2.05%
Digestive System	Host-Associated → Human → Digestive System	1.37%
Marine	Environmental → Aquatic → Marine	0.68%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	28.08%
Loam	Environmental → Terrestrial → Soil → Loam	21.23%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	15.75%
Soil	Host-Associated → Plants → Rhizosphere → Soil	12.33%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	11.64%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	4.11%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.05%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	2.05%
Large Intestine	Host-Associated → Human → Digestive System → Large Intestine	1.37%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.68%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.68%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	15.75%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	13.01%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	12.33%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	11.64%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	10.96%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	8.90%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	7.53%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	4.79%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	4.11%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	2.74%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.05%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	2.05%
Fecal	Host-Associated → Human → Digestive System → Large Intestine → Fecal	1.37%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	0.68%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.68%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.68%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.68%

Habitat	Taxonomy	Distribution
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	10.27%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	8.22%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	7.53%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	6.16%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	5.48%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	5.48%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	4.79%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	4.11%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.42%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	3.42%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	2.74%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	2.74%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	2.74%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.74%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	2.05%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	2.05%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	2.05%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	2.05%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.37%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	1.37%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.37%
Host-Associated	Host-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated	1.37%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere	1.37%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.37%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	1.37%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	1.37%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	0.68%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.68%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.68%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.68%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.68%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.68%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.68%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.68%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.68%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.68%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	0.68%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.68%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.68%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.68%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.68%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.68%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2162886007	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2	Host-Associated	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000443	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.2B clc assemly	Environmental	Open in IMG/M
3300003267	Sugarcane bulk soil Sample L1	Environmental	Open in IMG/M
3300003321	Sugarcane bulk soil Sample H1	Environmental	Open in IMG/M
3300004019	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleB_D2	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004267	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 6 MoBio	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300004785	Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - roots SR-1 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300004801	Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - roots SR-3 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005289	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2	Host-Associated	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005344	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG	Host-Associated	Open in IMG/M
3300005345	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG	Environmental	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005406	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005438	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005455	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG	Host-Associated	Open in IMG/M
3300005466	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG	Environmental	Open in IMG/M
3300005530	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG	Environmental	Open in IMG/M
3300005543	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG	Host-Associated	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300006196	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1	Host-Associated	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300012482	Arabidopsis rhizosphere microbial communities from North Carolina - M.Cvi.2.old.130510	Host-Associated	Open in IMG/M
3300012484	Unplanted soil (control) microbial communities from North Carolina - M.Soil.2.old.190510	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017966	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MG	Environmental	Open in IMG/M
3300019362	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1 (version 2)	Environmental	Open in IMG/M
3300021445	Bulk soil microbial communities from the field in Mead, Nebraska, USA - 072115-187_1 MetaG	Environmental	Open in IMG/M
3300023263	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S092-311B-6	Environmental	Open in IMG/M
3300025315	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Host-Associated	Open in IMG/M
3300025885	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025893	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025903	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025925	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025981	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026067	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300027717	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Endophyte Co-N S PM (SPAdes)	Host-Associated	Open in IMG/M
3300027775	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control (SPAdes)	Environmental	Open in IMG/M
3300027876	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes)	Host-Associated	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300031562	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D3	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031943	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D2	Environmental	Open in IMG/M
3300032012	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D3	Environmental	Open in IMG/M
3300032013	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300033004	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
SwRhRL2b_0680.00003310	2162886007	Switchgrass Rhizosphere	VIGAATSKGTARKSEVNTMPATTEAETPLLKLDSHLWKARAEAKQKRLERLLAQPVQNPRESERRTRWIKRALKAVKRGQNELKYQTALIDAYAEHLSVLEMNLIQAAEEKRGAPD
INPhiseqgaiiFebDRAFT_1058899151	3300000364	Soil	LCRRCHVEGFTPKGEVNTMPATTDAEXPLLKLESQLWKSRAEAKQKWLERVLSQPVRNPRERERRTIWIKRALEAVQRGQDEVKYQTALMDAYAEHLTVLEMRLIQAAEEKKGAPD*
F12B_103178853	3300000443	Soil	MPATTEAEAPLLKLESQLWKARAEAKQKWLERVLAQPVRNPRERERRTMWIKRALEAVQRGQDEIKYQTALMDAYAEHLTVLEMRLIQAAEEKKDASG*
soilL1_100180866	3300003267	Sugarcane Root And Bulk Soil	MPATTETEREAPVLKLETQVWKARAQAKQKWLERILAQPARTPQEQQRRTLWIKHALETVKHGQDELKYQTALMDAYAEHLTVLEMRLIQAAEEKRDAPD*
soilH1_102668733	3300003321	Sugarcane Root And Bulk Soil	MPATTETEPEAQVLNRESQAWKARAEAKQKWLERVLEQPVRTPQERERRTQWIKRALETVKDGQEELKYQTALMDAYAEHLTVLEMRLIQAAEEKRDAPD*
Ga0055439_100674062	3300004019	Natural And Restored Wetlands	MPATTEAEAPLLKLESQLWKARAEAKQKWLERVLAQPVRNLRERERRTMWIKRALEAVQHGQDEVKYQTALMDAYAEHLTVLEMRLIQAAEEKRGAPD*
Ga0062593_1000619124	3300004114	Soil	MPATTEVEAPLLKLDSQLWKARAEAKQKRLERLLAQPVQTPRESERRTMWIKRALKAVKRSQNELKYQTALMDAYAEHLSVLEMNLIQATEEKRGAPD*
Ga0062593_1002285492	3300004114	Soil	MPATTETESEAPALKLESQVWKARAQAKQKWLEHVLAQPVRTPREQERRTMWIKRALEAVKHGQEELKYQTALMDAYAEHLTVLEMRLIQATEEKKGGPS*
Ga0062593_1025265021	3300004114	Soil	MPATTETEPEASVLKLESQVWKARAQTKQKLLEQILAQPVRNPREQKRRAMWIKRALEAVKQGHDEIKYQTALMDAYAEHLTVLEMRLIQAAEEKEGTPG*
Ga0062593_1026228812	3300004114	Soil	MPATTEAETPLLKLETQLWKSRAEAKQKWLERALAQPVRNPRERERRTMWIKRALEAVQRGQDDIKYQTALMDAYAEHLTVLEMRLIQASEEKRGAPD*
Ga0062589_1005216541	3300004156	Soil	MPATTETEPEASVLKLESQVWKARAQTKQKLLEQILAQPVRNPREQKRRATWIKRALEAVKQGHDEIKYQTALMDAYAEHLTVLEMRLIQAAEEKEGTPG*
Ga0066396_100228492	3300004267	Tropical Forest Soil	MPATTEEPLLKLESQLWKTRAQAKQKWLERALAQEVQNNRDRERRTMWIKRALEAVKRGQDEIKYQTALMDAYAEHLSVLEMSLIQAAEEKEEKRS*
Ga0062595_1007676072	3300004479	Soil	MTVTTEMEAPLLKLESQLWKSRAQAKQKWLQQALAQPVRTARDRERRTIWIKRALEAVKRGQEEVKYQTALMDAYAEHLSVLEMSLIQAAEQKGGAPD*
Ga0062591_1023433782	3300004643	Soil	MPATTETEPEASVLKLESQVWKARAQTKQKLLEQILAQPVRNPREQKRRATWIKRALEAVKQGHDEIKYQTALMDAYAEHLTVLEM
Ga0058858_13974532	3300004785	Host-Associated	MPATTEAETPLLKLETQLWKSRAEAKQRWLERALAQPVRNPRERERRTMWIKRALEAVQRGQDDIKYQTALMDAYAEHLTVLEMRLIQASEEKRGAPD*
Ga0058860_121766591	3300004801	Host-Associated	RSSARRHNCDGACDSAGMGGAVTSKVQSKNEVNTMPATTEAETPLLKLETQLWKSRAEAKQKWLERALAQPVRNPRERERRTMWIKRALEAVQRGQDDIKYQTALMDAYAEHLTVLEMRLIQASEEKRGAPD*
Ga0062594_1003076592	3300005093	Soil	MPATTEAEAPLLKLETQLWKSRAEAKQKWLERVLAQPVRNPHERERRTKWIKRALEAVHRGQDEIKYQTALMDAYAEHLTVLEMRLIQAAEEKRGAPD*
Ga0065704_100105572	3300005289	Switchgrass Rhizosphere	MPATTEAETPLLKLDSHLWKARAEAKQKRLERLLAQPVQNPRESERRTRWIKRALKAVKRGQNELKYQTALIDAYAEHLSVLEMNLIQAAEEKRGAPD*
Ga0065705_101973573	3300005294	Switchgrass Rhizosphere	VIGAATSKGTARKSEVNTMPATTEAETPLLKLDSHLWKARAEAKQKRLERLLAQPVQNPRESERRTRWIKRALKAVKRGQNELKYQTALIDAYAEHLSVLEMNLIQAAEEKRGAPD*
Ga0070683_1022429981	3300005329	Corn Rhizosphere	SAVWGSAGAVGATTSKGITAKREVNTMPATTETEPEASVLKLESQVWKARAQTKQKLLEQILAQPVRNPREQKRRATWIKRALEAVKQGHDEIKYQTALMDAYAEHLSVLEMSLIEAAEQKDGRS*
Ga0070670_1003907742	3300005331	Switchgrass Rhizosphere	MPATTEAEAPLLKLETQLWKSRAEAKQKWLERALAQPVRNPRERERRTMWIKRALEAVQRGQDDIKYQTALMDAYAEHLTVLEMRLIQASEEKRGAPD*
Ga0066388_1007257541	3300005332	Tropical Forest Soil	LLKLESQLWKTRAQAKQKWLERALAQEVRNPRERERRTMWIKRALEAVKRGQDEIKYQTALMDAYAEHLSVLEMSLIQAAEEKEEKRS*
Ga0066388_1011000721	3300005332	Tropical Forest Soil	MPATTEAETPLLKLESQLWKTRAEAKQKWLERVLSQPVRNPREKERRTKWIKRALEAVQRGQDEVKYQTALMDAYAEHLTVLEMRLIQAAEEKKGAPD*
Ga0066388_1075757372	3300005332	Tropical Forest Soil	MPATTEAETPLLKLETQVWKSRAEAKQKWLERALAQPVRNPRERERRTMWIKRALEAVQRGRDEIKYQAALMDAYAEHLTVLEMRLIQASEEKRGAPD*
Ga0068868_1013374332	3300005338	Miscanthus Rhizosphere	MPATTEAEVPLLKLETQLWKSRAEAKQKWLERVLAQPVRNPHERERRTKWIKRALEAVHRGQDEIKYQTALMDAYAEHLTVLEMRLIQAAEEKRGAPD*
Ga0070689_1011980951	3300005340	Switchgrass Rhizosphere	MPATTEAETPLLKLETQLWKSRAEAKQKWLERALAQPVRNPRERERRTMWIKRALEAVQRGRDEIKYQVALMDAYAEHLTVLEMRLLQASEEKRGAPD*
Ga0070687_1004465982	3300005343	Switchgrass Rhizosphere	MTVTTEMEAPLLKLESQLWKSRAQAKQKWLQQALAQPVRTARDRERRTIWIKRALGAVKRGQEEVKYQTALMDAYAEHLSVLEMSLIQAAEQKGGAPD*
Ga0070661_1000868644	3300005344	Corn Rhizosphere	QVWKARAQTKQKLLEQILAQPVRNPREQKRRATWIKRALEAVKQGHDEIKYQTALMDAYAEHLTVLEMRLIQAAEEKEGTPG*
Ga0070692_101849903	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	LETQLWKSRAEAKQKWLERVLAQPVRNPHERERRTKWIKRALEAVHRGQDEIKYQTALMDAYAEHLTVLEMRLIQAAEEKRGAPD*
Ga0070671_1002452391	3300005355	Switchgrass Rhizosphere	MPATIEAEAPVLKLETQVWKARAEAKQKWLDRVLAQPVHNARERERRTRWIKRALEAVKLGQEELKYQTALMDAYAEHLSVLEMSLIEAAEQKEGRS*
Ga0070673_1000073035	3300005364	Switchgrass Rhizosphere	MSATIEAEAPVLKLETQVWKARAEAKQKWLDRALAQPVRTARERERRTVWIKRALEAVKQGQEEIKYQTALMDAYAEHLSVLEMSLIEAAEQKDGRS*
Ga0070673_1002985852	3300005364	Switchgrass Rhizosphere	MGGAVTSKVQSKNEVNTMPATTEAETPLLKLETQLWKSRAEAKQRWLERALAQPVRNPRERERRTMWIKRALEAVQRGQDDIKYQTALMDAYAEHLTVLEMRLIQASEEKRGAPD*
Ga0070703_101147911	3300005406	Corn, Switchgrass And Miscanthus Rhizosphere	ETQLWKSRAEAKQKWLERALAQPVRNPRERERRTMWIKRALEAVQRGRDEIKYQTALMDAYAEHLTVLEMRLIQASEEKKGAPD*
Ga0070713_1001393993	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MPATINAPLLKLESQVWKARAQAKQKWLESALAEPTRNIADVERRARWIKRALEAVTRAQEEVTYQTALLDAYAEHLNVLEMSLIEAIEQKRSAPD*
Ga0070701_101997093	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	MPATTETEPEASVLKLESQVWKARAQTKQKLLEQILAQPVRNPREQKRRAMWIKRALEAVKQGHDEIKYQTALMDAYAEHLTVLEMRLIQAAEEKE
Ga0070711_1016140282	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MPATINAPLLKLESQVWKARAQAKQKWLESALAEPTRNIADVERRARWIKRALEAVTRAQEEVTYQTALLDTYAEHLNVLEMSLIEAIEQKRSAPD*
Ga0070705_1005796091	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	SEVNTMPATTEAETPLLKLETQLWKSRAEAKQKWLERALAQPVRNPRERERRTMWIKRALEAVQRGQDDIKYQTALMDAYAEHLTVLEMRLIQASEEKRGAPD*
Ga0070700_1000734835	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	MPATTEAETPLLKLETQLWKSRAEAKQKWLERALAQPVRNPRERERRTMWIKRALEAVQRGRDELKYQTALMDAYAEHLTVLEMRLIQASEEKKGAPD*
Ga0070663_1014420652	3300005455	Corn Rhizosphere	MPATTEAEAPLLKLETQLWKSRAEAKQKWLERALAQPVRNPRERERRTMWIKRALEAVQRGRDEIKYQTALMDAYAEHLTVLEMRLIQASEEKKGAPD*
Ga0070685_105908091	3300005466	Switchgrass Rhizosphere	MPATTEAETPLLKLETQLWKSRAEAKQRWLERALAQPVRNPRERERRTMWIKRALEAVQRGQDDIKYQTALMDAYAEHLTV
Ga0070679_1020470781	3300005530	Corn Rhizosphere	MPATTETEPEAPVLKLESQMWKSRAQAKQKWLERVLAQPVRNPREAERRTMWIKRALEAVKHGQDELKYQTALMDAYAEHLTVLEMKLIQAAEEKRGAPG*
Ga0070672_1015138171	3300005543	Miscanthus Rhizosphere	MPATTETEPEASVLKLESQVWKARAQTKQKLLEQILAQPVRNPREQKRRAMWIKRALEAVKQGHDEIKYQTALMDAYAEHL
Ga0070695_1015533521	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	QLWKSRAEAKQKWLERALAQPVRNPRERERRTMWIKRALEAVQRGQDDIKYQTALMDAYAEHLTVLEMRLIQASEEKRGAPD*
Ga0070704_1008596122	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	MPATTEAETPLLKLETQLWKSRAEAKQRWLERALAQPVRNPRERERRTMWIKRALEAVQRGQDDIKYQTALMDAYAEHLTVLEMRLIQASEEKR
Ga0070664_1003290502	3300005564	Corn Rhizosphere	MGGAVTSKVQSKNEVNTMPATTEAETPLLKLETQLWKSRAEAKQKWLERALAQPVRNPRERERRTMWIKRALEAVQRGQDDIKYQTALMDAYAEHLTVLEMRLIQASEEKRGAPD*
Ga0068854_1001486852	3300005578	Corn Rhizosphere	MPATTEAEAPLLKLETQLWKSRAEAKQKWLERVLAQPVRNPHERERRTKWIKRALEAVHRGQDEIKYQTALMDAYAEHLTVLEMRLIQAAEE*
Ga0066905_1002153042	3300005713	Tropical Forest Soil	MPATTEAETPLLKLESQLWKTRAEAKQKWLERVLSQPVRNPRERERRTKWIKRALEAVQRGQDEVKYQTALMDAYAEHLTVLEMRLIQAAEEKKGAPD*
Ga0066905_1016927901	3300005713	Tropical Forest Soil	MPVTIEADAPLLKLESQLWKARAQAKQKWLERALAQPVRTPRERERRTKWIKRALEAVKRAEVEIKYHTALMDAYAEHLSVLEMSLIQAAEEKGGAPA*
Ga0066905_1019514352	3300005713	Tropical Forest Soil	MPVTTEADAPLLKLETQLWKTRAQAKQKWLERALAQPVRNPREKERRTIWIKRALETVQRAQDEIKYQTALIDAYAEHLSVLEMNLIQAVEEKNG
Ga0066903_1005881483	3300005764	Tropical Forest Soil	MPATTHAPLIDLQRQVWKARAQAKQKWLEQALAEPPRNPGDAERRKIWVKRALSLVKRAQTEITNEAALMDAYTEHLSVLEMSLIGAAEQMAKSENTPAKRRE*
Ga0066903_1007497364	3300005764	Tropical Forest Soil	MPATTEAETPLLKLETQLWKSRAEAKQKWMERALAQPVRNPRERERRTMWIKRALEAVQRGRDEIKYQAALMDAYAEHLTVLEMRLIQA
Ga0066903_1015136072	3300005764	Tropical Forest Soil	MTVTTEMDAPLLRLESQLWKSRAQAKQKWLQQALAQPVRTARDRERRTIWIKRALEAVKRGQEEVKYQTALMDAYAEHLSVLEMSLIQAAEQKGGAPD*
Ga0066903_1067879102	3300005764	Tropical Forest Soil	LESQLWKTRAQAKQKWLERALAQEVRNPRERERRTMWIKRALEAVKRGQDEIKYQTALMDAYAEHLSVLEMSLIQAAEEKEEKRS*
Ga0068863_1013235801	3300005841	Switchgrass Rhizosphere	GAVTSKVQSKNEVNTMPATTEAETPLLKLETQLWKSRAEAKQKWLERALAQPVRNPRERERRTMWIKRALEAVQRGQDDIKYQTALMDAYAEHLTVLEMRLIQASEEKKGAPD*
Ga0068858_1008431361	3300005842	Switchgrass Rhizosphere	MPATTEAEAPLLKLETQLWKSRAEAKQKWLERVLAQPVRNPHERERRTKWIKRALEAVHRGQDEIKYQTALMDAYAEHLTVLEMR
Ga0068862_1018525061	3300005844	Switchgrass Rhizosphere	MPATTETEPEASVLKLESQVWKARAQTKQKLLEQILAQPVRNPREQKRRATWIKRALEAVKRGQEEVKYQTALMDAYAEHLSVLEMSLIQAAEQKGGAPD*
Ga0081455_103334932	3300005937	Tabebuia Heterophylla Rhizosphere	MPVTTEADAPLLKLESQLWKTRAQAKQKWLERALAQPVRNPREKERRTIWIKRALEAVQRAQDEIKYQTALIDAYAEHLSVLEMNLIQAVEEKNGAPD*
Ga0075422_103562852	3300006196	Populus Rhizosphere	MPATTEAEAPLLKLETQLWKSRAEAKQKWLEHVLAQPVRNPRERERRTMWIKRALVAVQRGQEEIKYQTALMDTYAEHLTVLEMRLIQAAEEKRGAPD*
Ga0075422_104086141	3300006196	Populus Rhizosphere	KSEVNTMPATTEAEAPLLKLETQLWKSRAEAKQKLLERVLAQPVRNPRERARRTMWIKRALEAVQRAQDEIKYQTALIDAYAEHLSVLEMNLIQAVEKKSGAPD*
Ga0097621_1005645702	3300006237	Miscanthus Rhizosphere	MPATIEAEAPVLKLETQVWKARAEAKQKWLDRVLAQPVGNARERERRTRWIKRALEAVKLGQEELKYQTALMDAYAEHLSVLEMSLIEAAEQKEGRS*
Ga0097621_1009889882	3300006237	Miscanthus Rhizosphere	MPATTEAETPLLKLETQLWKSRAEAKQKWLERALAQPVRNPRERERRTMWIKRALEAVQRGRDEIKYQTALMDAYAEHLTVL
Ga0075428_1000095218	3300006844	Populus Rhizosphere	MPATTEREAPLLKLESQLWKTRAEAKQKWLERVLSQPVRNPRERERRTMWIKRALEAVQRGQDEVKYQTALMDAYAEHLNVLEMRLIQAAEEKKGASD*
Ga0075428_1011443422	3300006844	Populus Rhizosphere	MPVTIEADAPLLKLESQLWKTRGQAKQKWLERALAQPVRNARERERRTIWIKRALEAVQRAQDEIKYQTALIDAYAEHLSVLEMNLIQAVEKKSGAPD*
Ga0075433_101855103	3300006852	Populus Rhizosphere	MPATTETEPEAPVLKLESQMWKSRAQAKQKWLERVLAQPVRNPREAERRTMWIKRALEAVKHGQDELKYQTALMDAYAEHLTVLEMKLIQAAEEKRDAPG*
Ga0075425_1014170822	3300006854	Populus Rhizosphere	MPATTEREAPLLKLESQLWKTRAEAKQKWLERVLSQPVRNPRERERRTMWIKRALEAVQRGQDEIKYQTALMDAYAEHLTVLEMRLIQAAEEKKGAPD*
Ga0075425_1022768481	3300006854	Populus Rhizosphere	LESQLWKSRAQAKQKWLQQALAQPVRTARDRERRTIWIKRALEAVKRGQEEVKYQTALMDAYAEHLSVLEMSLIQAAEQKGGAPD*
Ga0075429_1016441952	3300006880	Populus Rhizosphere	MPATTEAEAPLLKLETQLWKSRAEAKQKWLEHVLAQPVRNPRERERRTMWIKRALVAVQRGQEEIKYQTALMDTYAEHLTVLEMRLIQAAEE
Ga0075424_1010671691	3300006904	Populus Rhizosphere	SGRLRWRRRGRRYLAEGDLKREGDTMPATTESEPEAPALKLESQVWKARAGAKQKWLERVLAQPVRTSQERERRTRWIKRALEAVKDGQNELKYQTALMDAYAEHLNVLEMKLIQAAEEKRGAPD*
Ga0079219_102788231	3300006954	Agricultural Soil	RRRHVDGFNRNSEVNTMPATTEAETPLLKLETQLWKSRAEAKQKWLERALAQPVRNPRERARRTMWIKRALEAVQRGRDEIKYQAALMDAYAEHLTVLEMRLMQASEEKRGAPD*
Ga0075435_1001619555	3300007076	Populus Rhizosphere	MTVTTEMEAPLLKLESQLWKSRAQAKQKWLQQALAQPVRTARDRERRTIWIKRALEAVKRGQEEVKYQTALMDAYAEHLSVLEMSLIQAAEQKGGA
Ga0111539_108422092	3300009094	Populus Rhizosphere	MPATTETEPEASVLKLESQVWKARAQTKQKLLEQILAQPVRNPREQKRRATWIKRALEAVKQGRDEIKYETALMDAYAEHLTVLEMRLIQAAEEKEGTPG*
Ga0111539_113212102	3300009094	Populus Rhizosphere	MPATTEAEAPLLKLETQLWKSRAEAKQKLLERVLAQPVRNPRERARRTMWIKRALEAVQRGQDEIKYQTALMDAYAEHLTVLEMRLIQATEEKRGAPD*
Ga0075418_1000079125	3300009100	Populus Rhizosphere	MPATTEREAPLLKLESQLWKTRAEAKQKWLERVLSQPVRNPRERERRTMWIKRALEAVQGGQDEVKYQTALMDAYAEHLNVLEMRLIQAAEEKKGASD*
Ga0114129_110825912	3300009147	Populus Rhizosphere	MPATTETEPEAPVLKLESQVWKARAGAKQKWLERVLAQPVRTSQERERRTRWIKRALEAVKDGQNELKYQTALMDAYAEHLNVLEMKLIQAAEEKRGAPD*
Ga0105241_120724851	3300009174	Corn Rhizosphere	MGGAVTSKVQSKNEVNTMPATTEAETPLLKLETQLWKSRAEAKQKWLERALAQPVRNPRERKRRTMWIKRALEAVQRGRDEIKYQAALMDAYAEHLTVLEMKLIQASEEKSGAPD*
Ga0105237_112150461	3300009545	Corn Rhizosphere	KLETQLWKSRAEAKQKWLERVLAQPVRNPHERERRTKWIKRALEAVHRGQDEIKYQTALMDAYAEHLTVLEMRLIQAAEEKRGAPD*
Ga0126380_106996832	3300010043	Tropical Forest Soil	MPAATETEAPVLKLESQLWKTRAEAKQKWLERVLSQPVRNPRERERRTKWIKRALEAVQRGQDEVKYQTALMDAYAEHLTVLEMRLIQAA
Ga0126382_104445232	3300010047	Tropical Forest Soil	MSEAEAPVLKLESQVWKARAQVKQKWLERVLAQPVRNPRERERRMMWIKRALEAVKHGQDEIKYQTALMDAYAEHLSVLEMNLIQAAEEKEGRS*
Ga0126382_111454392	3300010047	Tropical Forest Soil	SARRHRRYDVCGGADSVGAATSKGITPKSEVNTMPATTEAETPLLKLESQLWKTRAEAKQKWLERVLSQPVRNPRERERRTKWIKRALEAVQRGQDEVKYQTALMDAYAEHLTVLEMRLIQAAEEKKGAPD*
Ga0126372_104513582	3300010360	Tropical Forest Soil	MPATSEAEAPVLKLESQVWKARAQAKQKWLERVLAQPVRNPRERERRMMWIKRALEAVKHGQDEIKYQTALMDAYAEHLSVLEMNLIQAAEEKEGRS*
Ga0126377_100650003	3300010362	Tropical Forest Soil	MPATTEAETPLLKLETQLWKSRAEAKQKWLERALAQPVRNPRERERRTMWIKRALEAVQRGRDEIKYQTALMDAYAEHLSVLEMKLIQASEEKRGAPD*
Ga0126377_117240251	3300010362	Tropical Forest Soil	ARVNTMPAMSEAEAPVLKLESQVWKARAQVKQKWLERVLAQPVRNPRERERRMMWIKRALEAVKHGQDEIKYQTALMDAYAEHLSVLEMNLIQAAEEKEGRS*
Ga0105239_113320691	3300010375	Corn Rhizosphere	SAASCRRCHFNGFTPKSEVNTMPATTEAEAPLLKLETQLWKSRAEAKQKWLERVLAQPVRNPHERERRTKWIKRALEAVHRGQDEIKYQTALMDAYAEHLTVLEMRLIQAAEEKRGAPD*
Ga0126383_109836901	3300010398	Tropical Forest Soil	MPATIETPLLKLESQLWKARAQAKQKWLEHALAQPARTPREMSRRTMWIKRALEAVKRGQDEVRYQTALLDAYAEHLSVLEMNLLEAAEEKKSAPD*
Ga0134127_100165375	3300010399	Terrestrial Soil	LWQRRRVGAANSREIAPKGEVNTMPVTTEADAPLLKLESQLWKTRAEAKQKWLERALAQPARTPRERARRTMWIKRALEAVQGAQDEMKYQTALMDAYAEHLSVLEMNLIQAAEEKNGAPD*
Ga0157318_10162111	3300012482	Arabidopsis Rhizosphere	MPATTEAETPLLKLETQLWKSRAEAKQKWLERALAQPVRNPRERERRTMWIKRALEAVQRGRDEIKYQTALMDAYAEHLTVLEMRLIQASEEKKGAPD*
Ga0157333_10120462	3300012484	Soil	MPATTEAETPLLKLETQLWKSRAEAKQKWLERALAQPVRNPRERERRTMWIKRALEAVQRGRDEIKYQAALMDAYAEHLTVLEMRLLQASEEKRGAPD*
Ga0126375_100052035	3300012948	Tropical Forest Soil	MPATTEAETPLLKLESQLWKTRAEAKQKWLERVLSQPVRNPREKERRTKWIKRALEAVQRGQDEVTYQTALMDAYAEHLTVLEMRLIQAAEEKKGAPD*
Ga0164299_106657782	3300012958	Soil	MPATTEAETPLLKLETQLWKSRAEAKQKWLERALAQPVRNPRERERRTMWVKRALEAVQRGRDEIKYQVALMDAYAEHLSVLEMSLIEAAEQKEGRS*
Ga0157374_100716815	3300013296	Miscanthus Rhizosphere	MGGAVTSKVQSKNEVNTMPATTEAETPLLKLEQQLWKSRAEAKQQWLDRALAQPVRNTRERERRTMWIKRALEAVQRGQDDIKYQTALMDAYAEHLTVLEMRLIQASEEKRGAPD*
Ga0157375_100036215	3300013308	Miscanthus Rhizosphere	MPATTEAEAPLLKLETQLWKSRAEAKQKWLERALAQPVRNPHERERRTKWIKRALEAVHRGQDEIKYQTALMDAYAEHLTVLEMRLIQAAEEKRGAPD*
Ga0163163_124093352	3300014325	Switchgrass Rhizosphere	VWQRRRSRRCHVEGFTGKSEVKTMPATTEAETPLLKLETQLWKSRAEAKQKWLERALAQPVRNPRERERRTMWIKRALEAVQRGRDEIKYQVALMDAYAEHLTVLEMRLLQASEEKRGAPD*
Ga0157380_101271974	3300014326	Switchgrass Rhizosphere	MPATTEAEAPLLKLETQLWKSRAEAKQKWLERVLAQPVRNPHERERRTKWIKRALEAVHRGQDEIKYQTALMDAYAEHLTVLEMRLIQ
Ga0157377_105039491	3300014745	Miscanthus Rhizosphere	MPATTETEPEASVLKLESQVWKARAQTKQKLLEQILAQPVRNPREQKRRATWIKRALEAVKQGHDEIKYQTALMDAYAEHLTVLEMRLIQ
Ga0157376_113990521	3300014969	Miscanthus Rhizosphere	RQRVWQRRRSRRCHVERFTGKSEVNTMPATTEAETPLLKLETQLWKSRAEAKQKWLERALAQPVRNPRERERRTMWIKRALEAVQRGRDEIKYQVALMDAYAEHLTVLEMRLLQASEEKRGAPD*
Ga0132256_1002500073	3300015372	Arabidopsis Rhizosphere	APPLRRDHTKSEVNTMPATTEVEAPLLKLDSQLWKARAEAKQKRLERLLAQPVQNPRESARRTMWIKRALKAVKRGQNELKYQTALMDAYAEHLSVLEMNLIQATEEKRGAPD*
Ga0132257_1003934611	3300015373	Arabidopsis Rhizosphere	TMPATTEAETPLLKLETQLWKSRAEAKQKWLERALAQPVRNPRERERRTMWIKRALEAVQRGRDEIKYQTALMDAYAEHLTVLEMRLIQASEEKKGAPD*
Ga0132257_1003977432	3300015373	Arabidopsis Rhizosphere	MPATTEAETPLLKLETQLWKSRAEAKQKWLERALAQPVRNPRERERRTMWIKRALEAVQRGRDEIKYQVALMDAYAEHLTVLEMRLMQASEEKRGAPD*
Ga0132257_1012676312	3300015373	Arabidopsis Rhizosphere	MTVTTEMEAPLLKLESQLWKSRAQAKQKWLQQALAQPVRAARDRERRTIWIKRALEAVKRGQEEVKYQTALMDAYAEHLSVLEMSLIQAAEQKGGAPD*
Ga0132255_1000681114	3300015374	Arabidopsis Rhizosphere	MPATTEAETPLLKLETQLWKSRAEAKQKWLERALAQPVRNPRERERRTMWIKRALEAVQRGRDEIKYQAALMDAYAEHLTVLEMRLMQASEEKRGAPD*
Ga0187776_104907232	3300017966	Tropical Peatland	MPATIEAPLLKLERQVWKARAQAKQKWLERALAEPTRNSGDVERRARWIKRALEAVKRGQEEVRYQTALLDAYTEHLNVLEMSLIAAIEQKRGAPD
Ga0173479_107343352	3300019362	Soil	MPATTETEPEASVLKLESQVWKARAQTKQKLLEQILAQPVRNPREQKRRAMWIKRALEAVKQGHDEIKYQTALMDAYAEHLTVLEMRLIQAAEEKEGTPG
Ga0182009_100138561	3300021445	Soil	MSATIEAEAPVLKLETQVWKARAEAKQKWLDRALAQPVRTARERERRTVWIKRALEAVKQGQEEIKYQTALMDAYAEHLSVLEMSLIEAAEQKDGRS
Ga0247800_11405672	3300023263	Soil	GATTSKGITAKREVNTMPATTETEPEASVLKLESQVWKARAQTKQKLLEQILAQPVRNPREQKRRATWIKRALEAVKQGHDEIKYQTALMDAYAEHLTVLEMRLIQAAEEKEGTPG
Ga0207697_103937511	3300025315	Corn, Switchgrass And Miscanthus Rhizosphere	MPATTETEPEASVLKLESQVWKARAQTKQKLLEQILAQPVRNPREQKRRATWIKRALEAVKQGHDEIKYQTALMDAYAEHLTVLEMRLIQAAEEKEGTPG
Ga0207653_102091511	3300025885	Corn, Switchgrass And Miscanthus Rhizosphere	MPATTEAEAPLLKLETQLWKSRAEAKQKWLERVLAQPVRNPHERERRTKWIKRALEAVHRGQDEIKYQTALMDAYAEHLTVLEMRLIQAAEEKRGAPD
Ga0207682_100274422	3300025893	Miscanthus Rhizosphere	MPATTEAETPLLKLETQLWKSRAEAKQKWLERALAQPVRNPRERERRTMWIKRALEAVQRGQDDIKYQTALMDAYAEHLTVLEMRLIQASEEKRGAPD
Ga0207680_103946932	3300025903	Switchgrass Rhizosphere	MPATTEAETPLLKLETQLWKSRAEAKQRWLERALAQPVRNPRERERRTMWIKRALEAVQRGQDDIKYQTALMDAYAEHLTVLEMRLIQASEEKRGAPD
Ga0207680_108271312	3300025903	Switchgrass Rhizosphere	MPATTEAEAPLLKLETQLWKSRAEAKQKWLERVLAQPVRNPHERERRTKWIKRALEAVHRGQDEIKYQTALMDAYAEHLTVLEMRLIQAAEEKRG
Ga0207660_102523992	3300025917	Corn Rhizosphere	MPATTETEPEAPVLKLESQMWKSRAQAKQKWLERVLAQPVRNPREAERRTMWIKRALEAVKHGQDELKYQTALMDAYAEHLTVLEMKLIQAAEEKRDAPG
Ga0207650_100260856	3300025925	Switchgrass Rhizosphere	MPATTETEPEASVLKLENQVWKARAQTKQKLLEQILAQPVRNPREQKRRATWIKRALEAVKQGHDEIKYQTALMDAYAEHLTVLEMRLIQAAEEKEGTPG
Ga0207650_111321102	3300025925	Switchgrass Rhizosphere	MPATTEAEAPLLKLETQLWKSRAEAKQKWLERALAQPVRNPRERERRTMWIKRALEAVQRGQDDIKYQTALMDAYAEHLTVLEMRLIQASEEKRGAPD
Ga0207659_1000135414	3300025926	Miscanthus Rhizosphere	MGGAVTSKVQSKNEVNTMPATTEAETPLLKLETQLWKSRAEAKQRWLERALAQPVRNPRERERRTMWIKRALEAVQRGQDDIKYQTALMDAYAEHLTVLEMRLIQASEEKRGAPD
Ga0207700_101322691	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	VWKARAQAKQKWLESALAEPTRNIADVERRARWIKRALEAVTRAQEEVTYQTALLDAYAEHLNVLEMSLIEAIEQKRSAPD
Ga0207670_111140782	3300025936	Switchgrass Rhizosphere	MPATTETEPEASVLKLESQVWKARAQTKQKLLEQILAQPVRNPREQKRRATWIKRALEAVKQGQEEIKYQTALMDAYAEHLSVLEMSLIEAA
Ga0207689_103657042	3300025942	Miscanthus Rhizosphere	MWKSRAQAKQKWLERVLAQPVRNPREAERRTMWIKRALEAVKHGQDELKYQTALMDAYAEHLTVLEMKLIQAAEEKRDAPG
Ga0207679_114527581	3300025945	Corn Rhizosphere	SRRCHVEGQSKNEVNTMPATTEAETPLLKLETQLWKSRAEAKQKWLERALAQPVRNPRERERRTMWIKRALEAVQRGQDDIKYQTALMDAYAEHLTVLEMRLIQASEEKRGAPD
Ga0207651_113971041	3300025960	Switchgrass Rhizosphere	TEMEAPLLKLESQLWKSRAQAKQKWLQQALAQPVRTARDRERRTIWIKRALEAVKRGQEEVKYQTALMDAYAEHLSVLEMSLIQAAEQKGGAPD
Ga0207640_104575672	3300025981	Corn Rhizosphere	MPATTEAEAPLLKLETQLWKSRAEAKQKWLERVLAQPVRNPHERERRTKWIKRALEAVHRGQDEIKYQTALMDAYAEHLTVLEMRLIQAAEEKRD
Ga0207677_109721512	3300026023	Miscanthus Rhizosphere	MPATTEAEVPLLKLETQLWKSRAEAKQKWLERVLAQPVRNPHERERRTKWIKRALEAVHRGQDEIKYQTALMDAYAEHLTVLEMRLIQAAEEKRGAPD
Ga0207678_106465151	3300026067	Corn Rhizosphere	MPATTEAEAPLLKLETQLWKSRAEAKQKWLERALAQPVRNPRERERRTMWIKRALEAVQRGRDEIKYQTALMDAYAEHLTVLEMRLIQASEEKKGAPD
Ga0207708_100773543	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	MPATTEAETPLLKLETQLWKSRAEAKQKWLERALAQPVRNPRERERRTMWIKRALEAVQRGRDELKYQTALMDAYAEHLTVLEMRLIQASEEKKGAPD
Ga0207641_102089793	3300026088	Switchgrass Rhizosphere	MPATTEAETPLLKLETQLWKSRAEAKQKWLERALAQPVRNPRERERRTMWIKRALEAVQRGQDDIKYQTALMDAYAEHLTVLEMRLIQASEEKKGAPD
Ga0207641_109560392	3300026088	Switchgrass Rhizosphere	MPATTEAETPLLKLETQLWKSRAEAKQKWLERALAQPVRNPRERERRTMWIKRALEAVQRGRDEIKYQVALMDAYAEHLTVLEMRLLQASEEKRGAPD
Ga0207641_122466652	3300026088	Switchgrass Rhizosphere	MPATTEAETPLLKLETQLWKSRAEAKQKWLERALAQPVRNPRERERRTMWIKRALEAVQRGRDEIKYQTALMDAYAEHLTVLEMRLIQASEEKKGAPD
Ga0207676_117260381	3300026095	Switchgrass Rhizosphere	MPATTETEPEASVLKLESQVWKARAQTKQKLLEQILAQPVRNPREQKRRATWIKRALEAVKQGHDEIKYQTALMDAYAEHLTVLEMRLIQAA
Ga0207683_100815544	3300026121	Miscanthus Rhizosphere	MPATTEAETPLLKLETQLWKSRAEAKQKWLERALAQPVRNPRERERRTMWIKRALEAVQRGRDEIKYQTALMDAYAEHLTVLEMRLLQASEEKRGAPD
Ga0209998_100980432	3300027717	Arabidopsis Thaliana Rhizosphere	MPATTEVEAPLLKLDSQLWKARAEAKQKRLERLLAQPVQTPRESERRTMWIKRALKAVKRSQNELKYQTALMDAYAEHLSVLEMNLIQATEEKRGAPD
Ga0209177_101943801	3300027775	Agricultural Soil	LETQLWKSRAEAKQKWLERALAQPVRNPRERARRTMWIKRALEAVQRGRDEIKYQAALMDAYAEHLTVLEMRLMQASEEKRGAPD
Ga0209974_102406432	3300027876	Arabidopsis Thaliana Rhizosphere	TSKGITAKREVNTMPATTETEPEASVLKLESQVWKARAQTKQKLLEQILAQPVRNPREQKRRATWIKRALEAVKQGHDEIKYQTALMDAYAEHLTVLEMRLIQAAEEKEGTPG
Ga0207428_105690252	3300027907	Populus Rhizosphere	MPATTEAEAPLLKLETQLWKSRAEAKQKWLEHVLAQPVRNPRERERRTMWIKRALVAVQRGQEEIKYQTALMDTYAEHLTVLEMRLIQAAEEKRGAPD
Ga0310886_108493012	3300031562	Soil	MPATTEAEAPLLKLETQLWKSRAEAKQKWLERALAQPVRNPRERERRTMWIKRALEAVQRGRDEIKYQVALMDAYAEHLTVLEMRLLQASEEKRGAPD
Ga0310813_118798252	3300031716	Soil	LDTQVWKARAEAKQKWLDRALAQPVRTARERERRTVWIKRALEAVKQGQEEIKYQTALMDAYAEHLSVLEMSLIEAAEQKDGRS
Ga0307469_116402682	3300031720	Hardwood Forest Soil	MPVTTEADAPLLKLESQLWKTRAHAKQKWLERALAQPVRNPRERERRTIWIKRALEAVKRAQDEIKYQTALMDAYAEHLSVLEMNLIQAVEEKRSGAPD
Ga0307469_119660362	3300031720	Hardwood Forest Soil	LLKLESQLWKTRAEAKQKWLERVLSQPVRNPRERERRTMWIKRALEAVQRGQDEVKYQTALMDAYAEHLTVLEMRLIQAAEEKKGASD
Ga0307468_1001153792	3300031740	Hardwood Forest Soil	MPATTDAEAPLLKLESQLWKSRAEAKQKWLERVLSQPVRNPRERERRTMWIKRALEAVQRGQDEVKYQTALMDAYAEHLTVLEMRLIQAAEEKKGAPD
Ga0307468_1013293882	3300031740	Hardwood Forest Soil	MPATTEAGAPLLKLESQLWKTRAQAKQKWLERVLAQPVRTPREKERRTMWIKRALEAVKRGQDEIRHQTALMDAYAEHFSVIEMSLIQAAEEKRGAPD
Ga0307473_113073952	3300031820	Hardwood Forest Soil	DHTENEATTMTVTTEMEAPLLKLESQLWKSRAQAKQKWLQQALAQPVRTARDRERRTIWIKRALEAVKRGQEEVKYQTALMDAYAEHLSVLEMSLIQAAEQKGGAPD
Ga0306925_122338101	3300031890	Soil	MPATTHAPMLKLDSQRWKARAQAKQKWLARVLAQPARTPHEHERRTMWIKRALEAVKRGKTELKYQTALIDAYAEHLSVLEMNLMQAAEAKNNKRS
Ga0310885_100314864	3300031943	Soil	TEAEAPLLKLETQLWKSRAEAKQKWLERVLAQPVRNPHERERRTKWIKRALEAVHRGQDEIKYQTALMDAYAEHLTVLEMRLIQAAEEKRGAPD
Ga0310902_110438372	3300032012	Soil	ETQLWKSRAEAKQKWLERALAQPVRNPRERERRTMWIKRALEAVQRGRDEIKYQTALMDAYAEHLTVLEMRLIQASEEKKGAPD
Ga0310906_105555742	3300032013	Soil	ERFTGKSEVNTMPATTEAETPLLKLETQLWKSRAEAKQKWLERALAQPVRNPRERERRTMWIKRALEAVQRGRDELKYQTALMDAYAEHLTVLEMRLIQASEEKKGAPD
Ga0307472_1009092271	3300032205	Hardwood Forest Soil	WQRRLCRRCHVEGFTPKSEVKPMPATTEAEAPLLKLESQLWKTRAEAKQKWLERVLSQPVRNPRERERRTMWIKRALEAVQRGQDEIKYQTALMDAYAEHLTVLEMRLIQAAEEKKGAPD
Ga0335084_104982702	3300033004	Soil	VPVTIDAPLLKLESQVWRARAEAKQKWLEHALAKPVQDPADAKRRAIWIKRALEAVKQGQDELKHQTALLDAYAEHLGSLEMRLIQAIEEKRSAPD
Ga0335084_116576962	3300033004	Soil	VPVTIDAPLLKLESQVWKARAEAKQKWLEHALAKPIRNPADAKRRALWIQRALDAVKQGQDELKHQTALLDAYAEHLGSLEMRLIQAIEEKRSAPD
Ga0310810_110902121	3300033412	Soil	NTMPATTETESEAPALKLESQVWKARAQAKQKWLEHVLAQPVRTPREQERRTMWIKRALEAVKHGQEELKYQTALMDAYAEHLTVLEMRLIQATEEKKGGPS

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.59
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.59
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F049741

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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