Metagenome Family F049755

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F049755
Family Type	Metagenome
Number of Sequences	146
Average Sequence Length	53 residues
Representative Sequence	MDRRGILALAYRGVIHVRGKDCVHPDIGLVIVRMISFPARESGQRARMAVR
Number of Associated Samples	132
Number of Associated Scaffolds	146

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	32.19 %
% of genes near scaffold ends (potentially truncated)	50.00 %
% of genes from short scaffolds (< 2000 bps)	87.67 %
Associated GOLD sequencing projects	129
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (99.315 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere (15.753 % of family members)
Environment Ontology (ENVO)	Unclassified (33.562 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (52.740 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 15.69% β-sheet: 35.29% Coil/Unstructured: 49.02%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 146 Family Scaffolds
PF13637	Ank_4	28.77
PF12796	Ank_2	15.75
PF08818	DUF1801	8.90
PF02900	LigB	6.16
PF00023	Ank	2.74
PF12543	DUF3738	1.37
PF03551	PadR	1.37
PF02585	PIG-L	0.68
PF02771	Acyl-CoA_dh_N	0.68
PF01402	RHH_1	0.68
PF13620	CarboxypepD_reg	0.68
PF05016	ParE_toxin	0.68
PF00583	Acetyltransf_1	0.68
PF13533	Biotin_lipoyl_2	0.68
PF00589	Phage_integrase	0.68
PF04879	Molybdop_Fe4S4	0.68
PF01844	HNH	0.68
PF16576	HlyD_D23	0.68

COG ID	Name	Functional Category	% Frequency in 146 Family Scaffolds
COG4430	Uncharacterized conserved protein YdeI, YjbR/CyaY-like superfamily, DUF1801 family	Function unknown [S]	8.90
COG5646	Iron-binding protein Fra/YdhG, frataxin family (Fe-S cluster biosynthesis)	Posttranslational modification, protein turnover, chaperones [O]	8.90
COG5649	Uncharacterized conserved protein, DUF1801 domain	Function unknown [S]	8.90
COG1695	DNA-binding transcriptional regulator, PadR family	Transcription [K]	1.37
COG1733	DNA-binding transcriptional regulator, HxlR family	Transcription [K]	1.37
COG1846	DNA-binding transcriptional regulator, MarR family	Transcription [K]	1.37
COG1960	Acyl-CoA dehydrogenase related to the alkylation response protein AidB	Lipid transport and metabolism [I]	0.68
COG2120	N-acetylglucosaminyl deacetylase, LmbE family	Carbohydrate transport and metabolism [G]	0.68

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	99.32 %
Unclassified	root	N/A	0.68 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	99.32 %
Unclassified	root	N/A	0.68 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	99.32 %
Unclassified	root	N/A	0.68 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	16.44 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	9.59 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.68 %
Unclassified	root	N/A	0.68 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	13.70 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	7.53 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	1.37 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	0.68 %
Unclassified	root	N/A	0.68 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	12.33 %
unclassified Betaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria	7.53 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	1.37 %
Acidobacteria bacterium 13_1_20CM_2_65_9	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_20CM_2_65_9	0.68 %
Acidobacteria bacterium RIFCSPLOWO2_12_FULL_66_21	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_12_FULL_66_21	0.68 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.68 %
Unclassified	root	N/A	0.68 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	12.33 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	7.53 %
Solibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae	1.37 %
Nostocales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales	0.68 %
Acidobacteria bacterium 13_1_20CM_2_65_9	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_20CM_2_65_9	0.68 %
Acidobacteria bacterium RIFCSPLOWO2_12_FULL_66_21	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_12_FULL_66_21	0.68 %
Unclassified	root	N/A	0.68 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	12.33 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	7.53 %
Candidatus Solibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter	1.37 %
Calotrichaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Calotrichaceae	0.68 %
Acidobacteria bacterium 13_1_20CM_2_65_9	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_20CM_2_65_9	0.68 %
Acidobacteria bacterium RIFCSPLOWO2_12_FULL_66_21	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_12_FULL_66_21	0.68 %
Unclassified	root	N/A	0.68 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	12.33 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	7.53 %
Candidatus Solibacter usitatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	0.68 %
Calothrix	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Calotrichaceae → Calothrix	0.68 %
Acidobacteria bacterium 13_1_20CM_2_65_9	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_20CM_2_65_9	0.68 %
Acidobacteria bacterium RIFCSPLOWO2_12_FULL_66_21	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_12_FULL_66_21	0.68 %
Unclassified	root	N/A	0.68 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	12.33 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	7.53 %
unclassified Calothrix	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Calotrichaceae → Calothrix → unclassified Calothrix	0.68 %
Candidatus Solibacter usitatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	0.68 %
Acidobacteria bacterium 13_1_20CM_2_65_9	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_20CM_2_65_9	0.68 %
Acidobacteria bacterium RIFCSPLOWO2_12_FULL_66_21	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_12_FULL_66_21	0.68 %
Unclassified	root	N/A	0.68 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	12.33 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	7.53 %
Calothrix sp. PCC 7507	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Calotrichaceae → Calothrix → unclassified Calothrix → Calothrix sp. PCC 7507	0.68 %
Candidatus Solibacter usitatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	0.68 %
Acidobacteria bacterium 13_1_20CM_2_65_9	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_20CM_2_65_9	0.68 %
Acidobacteria bacterium RIFCSPLOWO2_12_FULL_66_21	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_12_FULL_66_21	0.68 %
Unclassified	root	N/A	0.68 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002907\|JGI25613J43889_10159138	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter	590	Open in IMG/M
3300002917\|JGI25616J43925_10117892	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1082	Open in IMG/M
3300005172\|Ga0066683_10610420	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	660	Open in IMG/M
3300005175\|Ga0066673_10429455	All Organisms → cellular organisms → Bacteria	775	Open in IMG/M
3300005186\|Ga0066676_10654809	All Organisms → cellular organisms → Bacteria	714	Open in IMG/M
3300005289\|Ga0065704_10516829	All Organisms → cellular organisms → Bacteria	655	Open in IMG/M
3300005294\|Ga0065705_11078180	All Organisms → cellular organisms → Bacteria	525	Open in IMG/M
3300005295\|Ga0065707_10061264	All Organisms → cellular organisms → Bacteria → Proteobacteria	886	Open in IMG/M
3300005295\|Ga0065707_10559230	All Organisms → cellular organisms → Bacteria	715	Open in IMG/M
3300005332\|Ga0066388_107066849	All Organisms → cellular organisms → Bacteria	565	Open in IMG/M
3300005335\|Ga0070666_10890975	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	657	Open in IMG/M
3300005343\|Ga0070687_100269508	All Organisms → cellular organisms → Bacteria	1066	Open in IMG/M
3300005353\|Ga0070669_100734641	All Organisms → cellular organisms → Bacteria	835	Open in IMG/M
3300005353\|Ga0070669_101772506	All Organisms → cellular organisms → Bacteria → Proteobacteria	538	Open in IMG/M
3300005356\|Ga0070674_100286132	All Organisms → cellular organisms → Bacteria	1308	Open in IMG/M
3300005356\|Ga0070674_101351735	All Organisms → cellular organisms → Bacteria	637	Open in IMG/M
3300005364\|Ga0070673_100702755	All Organisms → cellular organisms → Bacteria	928	Open in IMG/M
3300005456\|Ga0070678_101052785	All Organisms → cellular organisms → Bacteria	750	Open in IMG/M
3300005471\|Ga0070698_100388912	All Organisms → cellular organisms → Bacteria	1327	Open in IMG/M
3300005536\|Ga0070697_100586068	All Organisms → cellular organisms → Bacteria	979	Open in IMG/M
3300005544\|Ga0070686_100671428	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	824	Open in IMG/M
3300005574\|Ga0066694_10352718	All Organisms → cellular organisms → Bacteria	697	Open in IMG/M
3300005578\|Ga0068854_101839830	All Organisms → cellular organisms → Bacteria	556	Open in IMG/M
3300005618\|Ga0068864_100385763	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1329	Open in IMG/M
3300005764\|Ga0066903_100272971	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_20CM_2_65_9	2640	Open in IMG/M
3300006041\|Ga0075023_100481520	All Organisms → cellular organisms → Bacteria	555	Open in IMG/M
3300006046\|Ga0066652_101520706	All Organisms → cellular organisms → Bacteria	620	Open in IMG/M
3300006194\|Ga0075427_10012990	All Organisms → cellular organisms → Bacteria	1270	Open in IMG/M
3300006844\|Ga0075428_100021273	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Calotrichaceae → Calothrix → unclassified Calothrix → Calothrix sp. PCC 7507	7184	Open in IMG/M
3300006844\|Ga0075428_100062129	All Organisms → cellular organisms → Bacteria	4090	Open in IMG/M
3300006844\|Ga0075428_101704419	All Organisms → cellular organisms → Bacteria	657	Open in IMG/M
3300006845\|Ga0075421_100049925	All Organisms → cellular organisms → Bacteria	5296	Open in IMG/M
3300006845\|Ga0075421_102286785	All Organisms → cellular organisms → Bacteria	568	Open in IMG/M
3300006847\|Ga0075431_100672586	All Organisms → cellular organisms → Bacteria	1014	Open in IMG/M
3300006847\|Ga0075431_100699347	All Organisms → cellular organisms → Bacteria	991	Open in IMG/M
3300006847\|Ga0075431_101058891	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	777	Open in IMG/M
3300006852\|Ga0075433_10378686	All Organisms → cellular organisms → Bacteria	1249	Open in IMG/M
3300006853\|Ga0075420_100668911	All Organisms → cellular organisms → Bacteria	895	Open in IMG/M
3300006853\|Ga0075420_101201864	All Organisms → cellular organisms → Bacteria	651	Open in IMG/M
3300006853\|Ga0075420_101233054	All Organisms → cellular organisms → Bacteria	642	Open in IMG/M
3300006880\|Ga0075429_101767113	All Organisms → cellular organisms → Bacteria	537	Open in IMG/M
3300006903\|Ga0075426_10943438	All Organisms → cellular organisms → Bacteria	651	Open in IMG/M
3300006904\|Ga0075424_100821865	All Organisms → cellular organisms → Bacteria	991	Open in IMG/M
3300006904\|Ga0075424_102336956	All Organisms → cellular organisms → Bacteria	561	Open in IMG/M
3300006914\|Ga0075436_100077567	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	2301	Open in IMG/M
3300007076\|Ga0075435_101677937	All Organisms → cellular organisms → Bacteria	557	Open in IMG/M
3300009038\|Ga0099829_10281791	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_12_FULL_66_21	1360	Open in IMG/M
3300009094\|Ga0111539_13202497	All Organisms → cellular organisms → Bacteria	528	Open in IMG/M
3300009147\|Ga0114129_11969749	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	707	Open in IMG/M
3300009162\|Ga0075423_12077504	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	616	Open in IMG/M
3300009167\|Ga0113563_10385260	All Organisms → cellular organisms → Bacteria	1490	Open in IMG/M
3300009176\|Ga0105242_12011702	All Organisms → cellular organisms → Bacteria	620	Open in IMG/M
3300009545\|Ga0105237_10923717	All Organisms → cellular organisms → Bacteria	880	Open in IMG/M
3300009553\|Ga0105249_12077410	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	641	Open in IMG/M
3300010329\|Ga0134111_10312704	All Organisms → cellular organisms → Bacteria	657	Open in IMG/M
3300010366\|Ga0126379_10186879	All Organisms → cellular organisms → Bacteria	1977	Open in IMG/M
3300010398\|Ga0126383_12399257	All Organisms → cellular organisms → Bacteria	612	Open in IMG/M
3300010399\|Ga0134127_12092172	All Organisms → cellular organisms → Bacteria	644	Open in IMG/M
3300011445\|Ga0137427_10351895	All Organisms → cellular organisms → Bacteria	618	Open in IMG/M
3300012201\|Ga0137365_10152092	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1737	Open in IMG/M
3300012201\|Ga0137365_10299155	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1192	Open in IMG/M
3300012203\|Ga0137399_10055666	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	2897	Open in IMG/M
3300012204\|Ga0137374_10038074	All Organisms → cellular organisms → Bacteria	5133	Open in IMG/M
3300012212\|Ga0150985_114199687	All Organisms → cellular organisms → Bacteria	696	Open in IMG/M
3300012228\|Ga0137459_1040119	All Organisms → cellular organisms → Bacteria	1327	Open in IMG/M
3300012285\|Ga0137370_10103054	All Organisms → cellular organisms → Bacteria	1609	Open in IMG/M
3300012350\|Ga0137372_10131484	All Organisms → cellular organisms → Bacteria	2063	Open in IMG/M
3300012353\|Ga0137367_10164268	All Organisms → cellular organisms → Bacteria	1617	Open in IMG/M
3300012355\|Ga0137369_11094043	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	521	Open in IMG/M
3300012356\|Ga0137371_10161418	All Organisms → cellular organisms → Bacteria	1758	Open in IMG/M
3300012360\|Ga0137375_10276983	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1532	Open in IMG/M
3300012361\|Ga0137360_11071200	All Organisms → cellular organisms → Bacteria	696	Open in IMG/M
3300012362\|Ga0137361_10517587	All Organisms → cellular organisms → Bacteria	1096	Open in IMG/M
3300012363\|Ga0137390_10147004	All Organisms → cellular organisms → Bacteria → Acidobacteria	2340	Open in IMG/M
3300012469\|Ga0150984_112222861	All Organisms → cellular organisms → Bacteria	647	Open in IMG/M
3300012685\|Ga0137397_11352354	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	503	Open in IMG/M
3300012883\|Ga0157281_1084953	All Organisms → cellular organisms → Bacteria	550	Open in IMG/M
3300012897\|Ga0157285_10079953	All Organisms → cellular organisms → Bacteria	862	Open in IMG/M
3300012904\|Ga0157282_10038710	All Organisms → cellular organisms → Bacteria	1106	Open in IMG/M
3300012909\|Ga0157290_10033191	All Organisms → cellular organisms → Bacteria	1230	Open in IMG/M
3300012917\|Ga0137395_10701418	All Organisms → cellular organisms → Bacteria	732	Open in IMG/M
3300014968\|Ga0157379_11087432	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	765	Open in IMG/M
3300015077\|Ga0173483_10024262	All Organisms → cellular organisms → Bacteria	2165	Open in IMG/M
3300015201\|Ga0173478_10155855	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	913	Open in IMG/M
3300015241\|Ga0137418_10076694	All Organisms → cellular organisms → Bacteria → Proteobacteria	3036	Open in IMG/M
3300015371\|Ga0132258_12983566	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1173	Open in IMG/M
3300015372\|Ga0132256_103468750	All Organisms → cellular organisms → Bacteria	530	Open in IMG/M
3300015373\|Ga0132257_104036524	Not Available	534	Open in IMG/M
3300016445\|Ga0182038_10112549	All Organisms → cellular organisms → Bacteria	2004	Open in IMG/M
3300017654\|Ga0134069_1097963	All Organisms → cellular organisms → Bacteria	954	Open in IMG/M
3300017792\|Ga0163161_11180530	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	661	Open in IMG/M
3300018000\|Ga0184604_10022705	All Organisms → cellular organisms → Bacteria	1508	Open in IMG/M
3300018028\|Ga0184608_10525542	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	505	Open in IMG/M
3300018031\|Ga0184634_10140868	All Organisms → cellular organisms → Bacteria	1078	Open in IMG/M
3300018072\|Ga0184635_10023106	All Organisms → cellular organisms → Bacteria	2295	Open in IMG/M
3300018075\|Ga0184632_10168028	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	968	Open in IMG/M
3300018422\|Ga0190265_11395923	All Organisms → cellular organisms → Bacteria	815	Open in IMG/M
3300018466\|Ga0190268_10175192	All Organisms → cellular organisms → Bacteria	1134	Open in IMG/M
3300018476\|Ga0190274_10855185	All Organisms → cellular organisms → Bacteria	972	Open in IMG/M
3300018476\|Ga0190274_11359034	All Organisms → cellular organisms → Bacteria	799	Open in IMG/M
3300018476\|Ga0190274_12983646	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	568	Open in IMG/M
3300020003\|Ga0193739_1122461	All Organisms → cellular organisms → Bacteria	645	Open in IMG/M
3300020004\|Ga0193755_1089594	All Organisms → cellular organisms → Bacteria	981	Open in IMG/M
3300020018\|Ga0193721_1143785	All Organisms → cellular organisms → Bacteria	581	Open in IMG/M
3300020580\|Ga0210403_11472986	All Organisms → cellular organisms → Bacteria	513	Open in IMG/M
3300021073\|Ga0210378_10202207	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	759	Open in IMG/M
3300021171\|Ga0210405_10164046	All Organisms → cellular organisms → Bacteria	1760	Open in IMG/M
3300021510\|Ga0222621_1028666	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1141	Open in IMG/M
3300022534\|Ga0224452_1121769	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	802	Open in IMG/M
3300022694\|Ga0222623_10113738	All Organisms → cellular organisms → Bacteria	1054	Open in IMG/M
3300025159\|Ga0209619_10352769	All Organisms → cellular organisms → Bacteria	769	Open in IMG/M
3300025319\|Ga0209520_10262448	All Organisms → cellular organisms → Bacteria	1070	Open in IMG/M
3300025913\|Ga0207695_11679320	All Organisms → cellular organisms → Bacteria	516	Open in IMG/M
3300026089\|Ga0207648_10526899	All Organisms → cellular organisms → Bacteria	1083	Open in IMG/M
3300027526\|Ga0209968_1003655	All Organisms → cellular organisms → Bacteria	2305	Open in IMG/M
3300027535\|Ga0209734_1034306	All Organisms → cellular organisms → Bacteria	949	Open in IMG/M
3300027614\|Ga0209970_1107676	All Organisms → cellular organisms → Bacteria	535	Open in IMG/M
3300027682\|Ga0209971_1012216	All Organisms → cellular organisms → Bacteria	2032	Open in IMG/M
3300027907\|Ga0207428_10016189	All Organisms → cellular organisms → Bacteria	6419	Open in IMG/M
3300028587\|Ga0247828_10506534	All Organisms → cellular organisms → Bacteria	718	Open in IMG/M
3300028796\|Ga0307287_10096886	All Organisms → cellular organisms → Bacteria	1112	Open in IMG/M
3300028881\|Ga0307277_10141396	All Organisms → cellular organisms → Bacteria	1040	Open in IMG/M
3300028885\|Ga0307304_10318995	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	690	Open in IMG/M
3300028889\|Ga0247827_10159802	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1206	Open in IMG/M
3300031198\|Ga0307500_10228868	All Organisms → cellular organisms → Bacteria	566	Open in IMG/M
3300031226\|Ga0307497_10279711	All Organisms → cellular organisms → Bacteria → Acidobacteria	757	Open in IMG/M
3300031228\|Ga0299914_10634194	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	909	Open in IMG/M
3300031547\|Ga0310887_10308620	All Organisms → cellular organisms → Bacteria	904	Open in IMG/M
3300031562\|Ga0310886_10019943	All Organisms → cellular organisms → Bacteria	2664	Open in IMG/M
3300031731\|Ga0307405_10844948	All Organisms → cellular organisms → Bacteria	770	Open in IMG/M
3300031847\|Ga0310907_10073076	All Organisms → cellular organisms → Bacteria	1405	Open in IMG/M
3300031852\|Ga0307410_11176992	All Organisms → cellular organisms → Bacteria	667	Open in IMG/M
3300031908\|Ga0310900_10087308	All Organisms → cellular organisms → Bacteria	1962	Open in IMG/M
3300031911\|Ga0307412_10481630	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	1029	Open in IMG/M
3300031940\|Ga0310901_10505828	All Organisms → cellular organisms → Bacteria	542	Open in IMG/M
3300031943\|Ga0310885_10047786	All Organisms → cellular organisms → Bacteria	1761	Open in IMG/M
3300031995\|Ga0307409_101834214	All Organisms → cellular organisms → Bacteria	636	Open in IMG/M
3300032000\|Ga0310903_10745210	All Organisms → cellular organisms → Bacteria	532	Open in IMG/M
3300032013\|Ga0310906_10443043	All Organisms → cellular organisms → Bacteria	867	Open in IMG/M
3300032017\|Ga0310899_10566381	All Organisms → cellular organisms → Bacteria	565	Open in IMG/M
3300032174\|Ga0307470_10309679	All Organisms → cellular organisms → Bacteria	1075	Open in IMG/M
3300032179\|Ga0310889_10108182	All Organisms → cellular organisms → Bacteria	1194	Open in IMG/M
3300032205\|Ga0307472_100371446	All Organisms → cellular organisms → Bacteria	1183	Open in IMG/M
3300033412\|Ga0310810_10027108	All Organisms → cellular organisms → Bacteria	6963	Open in IMG/M
3300033417\|Ga0214471_10716426	All Organisms → cellular organisms → Bacteria	786	Open in IMG/M
3300034149\|Ga0364929_0268543	All Organisms → cellular organisms → Bacteria	577	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	64.38%
Host-Associated	Host-Associated	35.62%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	55.48%
Plants	Host-Associated → Plants	35.62%
Aquatic	Environmental → Aquatic	8.90%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	54.79%
Rhizosphere	Host-Associated → Plants → Rhizosphere	27.40%
Rhizoplane	Host-Associated → Plants → Rhizoplane	8.22%
Sediment	Environmental → Aquatic → Sediment	7.53%
Freshwater	Environmental → Aquatic → Freshwater	1.37%
Floodplain	Environmental → Terrestrial → Floodplain	0.68%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	49.32%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	21.92%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	7.53%
Loam	Environmental → Terrestrial → Soil → Loam	5.48%
Soil	Host-Associated → Plants → Rhizosphere → Soil	5.48%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	4.79%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.74%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.68%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.68%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.68%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.68%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	32.19%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	21.92%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	8.22%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	7.53%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	5.48%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	4.79%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	4.11%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	3.42%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.74%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.74%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.05%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	1.37%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.68%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.68%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.68%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.68%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.68%

Habitat	Taxonomy	Distribution
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	15.75%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	13.70%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	11.64%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	8.22%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	3.42%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.74%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	2.74%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	2.74%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	2.05%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	2.05%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	2.05%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	1.37%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.37%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.37%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.37%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.37%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.37%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.37%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	1.37%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.37%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.37%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.37%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.37%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.37%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.37%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.68%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	0.68%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.68%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.68%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.68%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.68%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.68%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.68%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere	0.68%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.68%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.68%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.68%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.68%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.68%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.68%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.68%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.68%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.68%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.68%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.68%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002907	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cm	Environmental	Open in IMG/M
3300002917	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_100cm	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005289	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2	Host-Associated	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005295	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005335	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG	Host-Associated	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005353	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG	Host-Associated	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005574	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143	Environmental	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006041	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006194	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1	Host-Associated	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006853	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4	Host-Associated	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009167	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG - Illumina Assembly (version 2)	Environmental	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300010329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_11112015	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300011445	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT700_2	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012228	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT700_2	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012883	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S014-104B-1	Environmental	Open in IMG/M
3300012897	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S074-202C-1	Environmental	Open in IMG/M
3300012904	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S029-104C-1	Environmental	Open in IMG/M
3300012909	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S149-409B-1	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300015077	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2 (version 2)	Environmental	Open in IMG/M
3300015201	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S014-104B-1 (version 2)	Environmental	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017654	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300018000	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_coex	Environmental	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018031	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b1	Environmental	Open in IMG/M
3300018072	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b2	Environmental	Open in IMG/M
3300018075	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b1	Environmental	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300020003	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2a2	Environmental	Open in IMG/M
3300020004	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1a2	Environmental	Open in IMG/M
3300020018	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2s2	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300021073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_b1 redo	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021510	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_coex	Environmental	Open in IMG/M
3300022534	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_b1	Environmental	Open in IMG/M
3300022694	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_coex	Environmental	Open in IMG/M
3300025159	Soil microbial communities from Rifle, Colorado, USA - sediment 16ft 3	Environmental	Open in IMG/M
3300025319	Soil microbial communities from Rifle, Colorado, USA - sediment 16ft 1	Environmental	Open in IMG/M
3300025913	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027526	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M2 AM (SPAdes)	Host-Associated	Open in IMG/M
3300027535	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M2 (SPAdes)	Environmental	Open in IMG/M
3300027614	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant Co S AM (SPAdes)	Host-Associated	Open in IMG/M
3300027682	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S AM (SPAdes)	Host-Associated	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300028587	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day3	Environmental	Open in IMG/M
3300028796	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_141	Environmental	Open in IMG/M
3300028881	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_116	Environmental	Open in IMG/M
3300028885	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_185	Environmental	Open in IMG/M
3300028889	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day2	Environmental	Open in IMG/M
3300031198	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 14_S	Environmental	Open in IMG/M
3300031226	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_S	Environmental	Open in IMG/M
3300031228	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT153D57	Environmental	Open in IMG/M
3300031547	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D4	Environmental	Open in IMG/M
3300031562	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D3	Environmental	Open in IMG/M
3300031731	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1	Host-Associated	Open in IMG/M
3300031847	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D4	Environmental	Open in IMG/M
3300031852	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3	Host-Associated	Open in IMG/M
3300031908	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1	Environmental	Open in IMG/M
3300031911	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1	Host-Associated	Open in IMG/M
3300031940	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D2	Environmental	Open in IMG/M
3300031943	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D2	Environmental	Open in IMG/M
3300031995	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2	Host-Associated	Open in IMG/M
3300032000	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D3	Environmental	Open in IMG/M
3300032013	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3	Environmental	Open in IMG/M
3300032017	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D4	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032179	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D2	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M
3300033417	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT142D155	Environmental	Open in IMG/M
3300034149	Sediment microbial communities from East River floodplain, Colorado, United States - 20_j17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI25613J43889_101591382	3300002907	Grasslands Soil	MDRRGILPLALRGAIHVRGKDCVHPDISLVIVRMISFPARESGQRAHRAVR*
JGI25616J43925_101178922	3300002917	Grasslands Soil	MDWRGIVVLAHRGVIHVRGKDCVHPESGLDIIRMNSFPARQSGPRARMAVQ*
Ga0066683_106104201	3300005172	Soil	MDQRGILALAHRGVIHVRGKDCVHPDIGLVIVRMISFPARESGQRARMAVR*
Ga0066673_104294552	3300005175	Soil	AVCCSACMRRLRKRCMDRRGILALAYRGVIHVRGKDCVHPDIGLVIVRMISFPARESGQRAHMAVR*
Ga0066676_106548092	3300005186	Soil	MRRLRKRCMDRRGILALAYRGVIHVRGKDCVHPDIGLVIVRMISFPARESGQRARMAVR*
Ga0065704_105168292	3300005289	Switchgrass Rhizosphere	ALAHRGVTHVRGKDCVHPDIGLVIVRMISFPARESGQRARMAVR*
Ga0065705_110781802	3300005294	Switchgrass Rhizosphere	MRRLRKRRTDRRGILALADRGAIHVRGKDCVHPDIGLVIVRMISFPARESGQRARMAVR*
Ga0065707_100612642	3300005295	Switchgrass Rhizosphere	MLLGLMRRLRNRSMDGRGILALAYRGVIHVRGKDCVHPDIGLVIVRMISFPARESGQRARMAVR*
Ga0065707_105592302	3300005295	Switchgrass Rhizosphere	MRRLRKRRTDRRGILALADRGAIHVRGKDCVHPDIGRVIVRMISFPARESGQRARMAMR*
Ga0066388_1070668492	3300005332	Tropical Forest Soil	GILALAHRGVTHVRGKDCVHPDIGLVIVRMISFPARESGQRARMAVR*
Ga0070666_108909751	3300005335	Switchgrass Rhizosphere	MLFELMRRLRKRSTDGHGILALAYRGVIHVRGKDCVHPDIGLVIVVRMISFPARESGQRA
Ga0070687_1002695082	3300005343	Switchgrass Rhizosphere	VRRLGKRCMDRRGILALAYRGVIHVRGKDCVHPDIGLVIVTMISFPARESGQRARMAVR*
Ga0070669_1007346412	3300005353	Switchgrass Rhizosphere	ILALAHRGVTHVRGKDCVHPDIGLVIVRMISFPARESGQRARMAVR*
Ga0070669_1017725061	3300005353	Switchgrass Rhizosphere	ALAYRGVIHVRGKDCVHPDTGLVIVRMISFPARKSGQRARLAVR*
Ga0070674_1002861322	3300005356	Miscanthus Rhizosphere	ILALAHRGVTHVRGKDCVHPDIGLVVVRMISFPARESGQRARRAVP*
Ga0070674_1013517351	3300005356	Miscanthus Rhizosphere	RRGILALAHRGVTHVRGKDCVHPDIGLVSLRMISFPARESGQRAQMAVR*
Ga0070673_1007027552	3300005364	Switchgrass Rhizosphere	MRRLRKRCMDRRGILALAYRGVIHVRGKDCVHPDIGFVIVRMISFPARKSGQRARMAVR*
Ga0070678_1010527851	3300005456	Miscanthus Rhizosphere	ILALAHRGVTHVRGKDCVHPDIGLVIVRMISFPARESGPRARRLCRRHGRERSSS*
Ga0070698_1003889122	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MDRHGILALAHRGVTHVRGKDCVHPDIGLVIVRMISFPARESGQRARMAVR*
Ga0070697_1005860681	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MRRLRKRCMDRRDILALAYRGVIHVRGKDCVHPDMGLVIVRMISFPARESGQRAHMAVR*
Ga0070686_1006714282	3300005544	Switchgrass Rhizosphere	LALAHRGVTHVRGKDCVHPDIGLVIVRMISFPARESGQRARMAVR*
Ga0066694_103527182	3300005574	Soil	MRRLRKRCMDRRGILALAYRGVIHVRGKDCVHPDIGLVIVRMISFPARESGQRAHMAVR*
Ga0068854_1018398301	3300005578	Corn Rhizosphere	AHRGVTHVRGKDCVHPDIGLVIVRMISFPARESGQRARRAVR*
Ga0068864_1003857631	3300005618	Switchgrass Rhizosphere	RGILALAHRGVTHVRGKDCVHPDIGLVIVRMISFPARESGQRARMAVR*
Ga0066903_1002729713	3300005764	Tropical Forest Soil	LAHRGVTHVRGKDCVHPDIGLVIGTMISFPARESGQRA*
Ga0075023_1004815202	3300006041	Watersheds	LSRVCCSDCMRRLRKGCMDRRGILALAHRGVIHVRGKDCVHPDIGLVIVRMISFPARESGQRARMAVR*
Ga0066652_1015207062	3300006046	Soil	LALAHRGVTHVRGKDCVHPDIGLVIVRMISFPARKSGQRARMAVR*
Ga0075427_100129902	3300006194	Populus Rhizosphere	MLLGLMRRLRKRSMDGRGILALAYRGVIHVRGKDCVHPDIGLVIVRMISFPARESGQRARMAMR*
Ga0075428_1000212736	3300006844	Populus Rhizosphere	MDRRGILALAHRGVIHVRGKDCVHPDMGLVIVVRMISFPARESGQRAHMAVR*
Ga0075428_1000621291	3300006844	Populus Rhizosphere	MEGRGILALAHRGVTHVRGKDCVHPDIGLVSIRMISFPARESGQRARMAVRSHSRERS
Ga0075428_1017044192	3300006844	Populus Rhizosphere	ILALAHRGVTHVRGKDCVHPDIGLVVVRMISFPARESGPRARRAVP*
Ga0075421_1000499254	3300006845	Populus Rhizosphere	MEGRGILALAHRGVTHVRGKDCVHPDIGLVNIRMISFPARESGQRARMAVRSHSRERSSS
Ga0075421_1022867851	3300006845	Populus Rhizosphere	GILALAHRGVTHVRGKDCVHPDIGLVVVRMISFPARESGQRARRAVP*
Ga0075431_1006725862	3300006847	Populus Rhizosphere	LALAHRGVTHVRGKDCVHPDIGLVVVRMISFPARESGQRARRAVP*
Ga0075431_1006993472	3300006847	Populus Rhizosphere	MLLGLMRRLRKRSMDGRGILALAYRGVIHVRGKDCVHPDIGLVIVRMISFPARESGQRARMAVR*
Ga0075431_1010588912	3300006847	Populus Rhizosphere	MRRLRRGHMDRRGILALAHRGVIHVRGKDCVHPDMGLVIVVRMISFPARESGQRAHMAVR
Ga0075433_103786862	3300006852	Populus Rhizosphere	MLLGLMRRLRKRRMDRRGILALAYRGVIHVRGKDCVHPDIGLVIVRMISFPARESGQRARMAVR*
Ga0075420_1006689112	3300006853	Populus Rhizosphere	MLLGLMRRLRKRSMDGRGILALAYRGVIHVRGKDCVHPDIGLVIVRMISFPARESGQRARRLCRRHRRERSSS*
Ga0075420_1012018641	3300006853	Populus Rhizosphere	AHRGVIHVRGKDCVHPDMGLVIVVRMISFPARESGQRAHMAVR*
Ga0075420_1012330541	3300006853	Populus Rhizosphere	RGVIHVRGKDCVHPDIGLVIVRMISFPARESGQRARMAVR*
Ga0075429_1017671132	3300006880	Populus Rhizosphere	RGAIHVRGKDCVHPDIGLVIVRMISFPARESGQRARMAVPRHGRERSSS*
Ga0075426_109434381	3300006903	Populus Rhizosphere	VIHVRGKDCVHPDIGLVIVRMISFPARESGQRARMAVR*
Ga0075424_1008218651	3300006904	Populus Rhizosphere	AYRGVIHVRGKDCVHPDIGLVIVRMISFPARESGQRARMAVR*
Ga0075424_1023369561	3300006904	Populus Rhizosphere	AYRGVIHVRGKDCVHPDIGLVIVRMISFPARESGQRARMARR*
Ga0075436_1000775672	3300006914	Populus Rhizosphere	MLLGLMRRLRKRCMDRRGILALAYRGVIHVRGKDCVHPDIGLVIVRMISFPARESGQRARMARR*
Ga0075435_1016779372	3300007076	Populus Rhizosphere	MRRQRKRRTDRRGILALAGGAIHVRGKDCVHPDIGLVIVRMISFPARESGQRARMAVR*
Ga0099829_102817913	3300009038	Vadose Zone Soil	MDRRGILALAHRGVIHVRGKDCVHPDIGFVIVRMISFPARESGQRARRAVR*
Ga0111539_132024971	3300009094	Populus Rhizosphere	LAYRGVIHVRGKDCVHPDIGLVIVRMISFPARESGQRARRLCRRHRRERSSS*
Ga0114129_119697492	3300009147	Populus Rhizosphere	MDRRGILALAYRGVIHVCGKDCVHPDIGLVIVRMISFPARESGQRARMAVR*
Ga0075423_120775042	3300009162	Populus Rhizosphere	MLLGLMRRLRKRCMDRRGILALAYRGVIHVRGKDCVHPDIGLVIVRMISFPARESGRRARMAVR*
Ga0113563_103852604	3300009167	Freshwater Wetlands	MDRRGILALAHRGVTHVRGKDCVHPDIDRVIVRMISFPARESGQRARMAVR*
Ga0105242_120117022	3300009176	Miscanthus Rhizosphere	VTHVRGKDCVHPDIGLVSLRMISFPARESGQRAHMAVR*
Ga0105237_109237172	3300009545	Corn Rhizosphere	MDRRGILAPAYRGVIHVRGKDCVHPDIGLVIVRMISFPARESGQRARMAVR*
Ga0105249_120774101	3300009553	Switchgrass Rhizosphere	GILALAHRGVTHVRGKDCVHPDIGLVIVRMISFPARESGQGARMAVRRA*
Ga0134111_103127041	3300010329	Grasslands Soil	MRRLRKKCMVRRRILALAYRGVIHVRGKDCVHPDIGLVIVRMISFPARESGQRARMAVR*
Ga0126379_101868791	3300010366	Tropical Forest Soil	LALAHRGVTHVRGKDCVHPDIGLVIVRMISFPARTSGQRARVAVR*
Ga0126383_123992571	3300010398	Tropical Forest Soil	HRGVTHVRGKDCVHPDIGLVIVRMISFPARESGRRARMAAP*
Ga0134127_120921721	3300010399	Terrestrial Soil	THVRGKDCVHPDIGLIIVRMISFPARESGQRARMAVR*
Ga0137427_103518951	3300011445	Soil	RGILALAHRGVTHVRGKDCVHPDIGLVVVRMISFPARESGQRARRAVP*
Ga0137365_101520924	3300012201	Vadose Zone Soil	MDRRGILALAHRGVIHVRGKDCVHPDIGLVIVRMISFPARESGQRARMAVR*
Ga0137365_102991552	3300012201	Vadose Zone Soil	MRRLRKRCMDRRGILALAYRGVIHVRGKDCVHPDIGLVIIRMISFPARESGQRARMAVR*
Ga0137399_100556662	3300012203	Vadose Zone Soil	MDRRGILALAYRGVIHVRGKDCVHPDIGLVIVRMISFPARESGQRARMAVR*
Ga0137374_100380743	3300012204	Vadose Zone Soil	MDRRGILALAHRGVIHVRGKDCVHPDIGLVVVRMISFPARESGQRARMAVR*
Ga0150985_1141996871	3300012212	Avena Fatua Rhizosphere	THVRGKDCVHPDIGLVIVRMISFPARESGQRARMAVR*
Ga0137459_10401191	3300012228	Soil	RKRCINRRGILALAYRGVIHVRGKDCVHSDIGFVIVKMISFPARESGQRARMAVR*
Ga0137370_101030542	3300012285	Vadose Zone Soil	MDRRGILALAYRGVIHVRGKDCVHPDIGLVIIRMISFPARESGQRARMAVR*
Ga0137372_101314842	3300012350	Vadose Zone Soil	MRRLRKRWMDRRGILALAYRGVIHVRGKDCVHPDIGLVIIRMISFPARESGQRARMAVR*
Ga0137367_101642682	3300012353	Vadose Zone Soil	MRRLRKRCMDRRGILALAYRGVIHVRGKDCVHPDIGRVVVKMISFPARESGQRARRAVR*
Ga0137369_110940432	3300012355	Vadose Zone Soil	MLLGLHATAAAKRCMDRRGILALAYRGVIHVRGKDCVHSDIGLVIVRMISFPARESGQRARMAVR*
Ga0137371_101614182	3300012356	Vadose Zone Soil	MLLGLMRRLRKRSMDGRGILALAYRGVIHVRGKDCVHSDIGLVIVRMISFPARESGQRARMAVR*
Ga0137375_102769832	3300012360	Vadose Zone Soil	GILALAHRGVTHVRGKDCVHPDIGLVSIRMISFPARESGQRARMAVR*
Ga0137360_110712002	3300012361	Vadose Zone Soil	MDRRGILALAYRGVIHVRGKDCVHPDIGFVIVRMISFPARESGQRARMAVR*
Ga0137361_105175872	3300012362	Vadose Zone Soil	MDLHGILAVAHRGVIHVRGKDCVHPDIGLVIVRMISFPARESGQRARMAVR*
Ga0137390_101470042	3300012363	Vadose Zone Soil	MDRRGKLALAHRGVTHVRGKDCVHPDIGLVIVRMISFPARESGQRARMAVR*
Ga0150984_1122228611	3300012469	Avena Fatua Rhizosphere	THVRGKDCVHPDISLVIVRMISFPARESGQRARRAVR*
Ga0137397_113523542	3300012685	Vadose Zone Soil	MRRLRKRRTDRRGILALADRGAIHVRGKDCVHPDIGLVIVRMISFPARE
Ga0157281_10849531	3300012883	Soil	ACSDCMPRRRKKCMDRRGILALAYRGVIHVRGKDCVHPDIGLVVVRMISFPARESGQRARRAVP*
Ga0157285_100799532	3300012897	Soil	MLLGLMRRLRNRSMDGRGILALAYRGVIHVRGKDCVHPDIGLVIVRMISFPARESGQRARMAMR*
Ga0157282_100387101	3300012904	Soil	THVRGKDCVHPDIGLVVVRMISFPARESGQRARRAVP*
Ga0157290_100331912	3300012909	Soil	IAGMLLGLMRRLRNRSMDGRGILALAYRGVIHVRGKDCVHPDIGFAIVRMISFPALESGQRARMAVR*
Ga0137395_107014182	3300012917	Vadose Zone Soil	MDRRGILPLALRGAIHVRGKDCVHPDIGLVIVRMISFPARESGQRARMAVR*
Ga0157379_110874322	3300014968	Switchgrass Rhizosphere	VDRRSILALAHRGVTHVRGKDCVHPDISLVIVRMISFPARESGQRARMAVR*
Ga0173483_100242622	3300015077	Soil	LMRRLRKRSLDVRGILALAYRGVIHVRGKDCVHPDIGFAIVRMISFPALESGQRARMAVR
Ga0173478_101558552	3300015201	Soil	MLLGLMRRLRKRSLDVRGILALAYRGVIHVRGKDCVHPDIGFAIVRMISFPALESGQRARMAVR*
Ga0137418_100766941	3300015241	Vadose Zone Soil	MRRLRKRCMDRRGILALAYRGVIHVRGKDCVHPDIGLVIVRMISFPARESGQRARMAVPRHGRERSSS*
Ga0132258_129835661	3300015371	Arabidopsis Rhizosphere	VDRRVILALAHRGVTHVRGKDCVHPDIGFVIVRMISFPARESGQRARRAVR
Ga0132256_1034687501	3300015372	Arabidopsis Rhizosphere	GRLFGLMRRLRKRCMDGHGILALAYRGVIHVRGKDCVHPDMGLVIVRMISFPARESGQRARMAVR*
Ga0132257_1040365242	3300015373	Arabidopsis Rhizosphere	MDRGGILALAYRGVIHVRGKDCVHPDIGLVIVRMISFPARESGQRARMA
Ga0182038_101125492	3300016445	Soil	MDGRGILALAHRGVTHVRGKDCVHPDIGLVIVRMISFPARESGQRARMAVR
Ga0134069_10979632	3300017654	Grasslands Soil	ALAYRGVIHVRGKDCVHPDIGLVIVRMISFPARESGQRARMAVR
Ga0163161_111805302	3300017792	Switchgrass Rhizosphere	MDRRGILALAYRGVIHVRGKDCVHPDMGLVIVRMISFPARKSGQRARMAVRSA
Ga0184604_100227051	3300018000	Groundwater Sediment	MDRRGILALAYRGVIHVRGKDCVHPDIGLVIVRMISFPARESGQRARMAVR
Ga0184608_105255421	3300018028	Groundwater Sediment	MRRLRKKCMDRRGILALAYRGVIHVRGKDCVHPDIGLVIVRMFSFPARESGQRARMAVR
Ga0184634_101408682	3300018031	Groundwater Sediment	MDRRGILALAHRGVIHVRGKDCVHPDIGLVIVRMISFPARESGQRARMAVPRHGRERSSS
Ga0184635_100231062	3300018072	Groundwater Sediment	MLLDCMRRLLKRCMDRRGILALAYRGVIHVRGKDCVHPDIGLVIVRMISFPARESGQRARMAVR
Ga0184632_101680281	3300018075	Groundwater Sediment	MRRLRKRCMDRRGILALAYRGVIHVRGKDCVHPDISLVIVRMISFPARESGQRARMAVR
Ga0190265_113959232	3300018422	Soil	YRGVIHVRGKDCVYPDLGLVIVRMISFPARESGQRARMAVR
Ga0190268_101751922	3300018466	Soil	MDGRGILALAYRGVIHVRGKDCVHPDIGLVIVRMISFLPGRADNGRVWLCGRHSRERSSS
Ga0190274_108551852	3300018476	Soil	MDRRAILALASRGVIHVRGKDCVHPDIGLVIIRMISFPARESGQRARMAVR
Ga0190274_113590342	3300018476	Soil	DGRGILALAYRGVIHVRGKDCVHSDIGLVIVRMISFPARESGQRARRAVR
Ga0190274_129836462	3300018476	Soil	MDRRGILALAYRGVIHVRGKDCVHPDIGLVIVRMISFPARKSGQRARMAVR
Ga0193739_11224611	3300020003	Soil	RCMDRRGILALAYRGVIHVRGKDCVHPDIGLVIVRMISFPARESGQRARMAVR
Ga0193755_10895942	3300020004	Soil	SDCMRRLRKRCMDRRGILALAYRGVIHVRGKDCVHPDIGLVIIRMISVPARESGQRARMAVR
Ga0193721_11437851	3300020018	Soil	LALAYRGVIHVRGKDCVHPDIGLVIVRMISFPARESGQRARMAVR
Ga0210403_114729861	3300020580	Soil	MPFGLKAHLRRRRIDQRGILAAAHRGVTHVRGKDCVHPDSDYVIVRMISFPARESGQRAH
Ga0210378_102022071	3300021073	Groundwater Sediment	VVHVRGKDCVHPDIGLVIVRMISFPARESGQRARMAVR
Ga0210405_101640462	3300021171	Soil	MDRRGILALAHRGVIHVRGKDCVHPDIGLVIVRMISFPARESGRRAHMAVR
Ga0222621_10286661	3300021510	Groundwater Sediment	MRRLRKRCMDRRGILALAYRGVIHVRGKDCVHPDIGLVIVRMISFPARKSGQRARMAVR
Ga0224452_11217691	3300022534	Groundwater Sediment	HRGVTHVRGKDCVHPDIGLVIVRMISFPARESGQRARMAVR
Ga0222623_101137381	3300022694	Groundwater Sediment	MRRLRKRCMDRRGILALAYRGVIHVRGKDCVHPDIGLVIVRMISFPARESGQRARMAVR
Ga0209619_103527692	3300025159	Soil	QDGRGILALAHRGVTHVRGKDCVHPDIGLVIVRMISFPARESGQRARMAVR
Ga0209520_102624481	3300025319	Soil	MRRLRKRCMDRRGILALAHRGVIHVRGKDCVHPDIGLVIVRMISFPARESGQRARMAVR
Ga0207695_116793202	3300025913	Corn Rhizosphere	MDARGILALAHRGVTHVRGKDCVHPDIGRVIVTMISFPARESGQRARKAVR
Ga0207648_105268992	3300026089	Miscanthus Rhizosphere	MLFGLMRRLRKRCMDGHGILALAYRGVIHVRGKDCVHPDIGLVIVRMISFPARESGQRARMAVR
Ga0209968_10036553	3300027526	Arabidopsis Thaliana Rhizosphere	MDGRGILATAYRGVLHVRGKDCVHPDIGLVVVRMISFPARESGQRARMAVR
Ga0209734_10343061	3300027535	Forest Soil	RRGILALAYRGVIHVRGKDCVHPDIDYVIVRMISFPARESGQRARMAVR
Ga0209970_11076762	3300027614	Arabidopsis Thaliana Rhizosphere	MDGRGILALAYRGVIHVRGKDCVHPDIGLVIVRMISFPARESGQRARMAVR
Ga0209971_10122162	3300027682	Arabidopsis Thaliana Rhizosphere	MDGRGILATAYRGVLHVRGKDCVHPDIGLVVVRMISFPARESGQRARRAVP
Ga0207428_100161895	3300027907	Populus Rhizosphere	MLLGLMRRLRKRSMDGRGILALAYRGVIHVRGKDCVHPDIGLVIVRMISFPARESGQRARMAMR
Ga0247828_105065342	3300028587	Soil	MLLGLRRLRKRCMDRRGILALAYRGVIHVRGKDCVHPDIGLVIVRMISFPARKSGQRARMAVR
Ga0307287_100968861	3300028796	Soil	AHRGVIHVRGKDCVHPDIGLVIVRMISFPARESGQRARMAVR
Ga0307277_101413962	3300028881	Soil	MDRRGILALAYRGVTHVRGKDCVHPDIGLVIVRMISFPARESGQRARMAVR
Ga0307304_103189952	3300028885	Soil	ILALAYRGVIHVRGKDCVHPDIGLVIVRMISFPARESGQRARMAVR
Ga0247827_101598022	3300028889	Soil	MLLGLRRLRKRCMDRRGILALAYRGVIHVRGKDCVHPDIGLVIVRMISFPARESGQRARMAVR
Ga0307500_102288681	3300031198	Soil	SDCMRRLRKRWMDRRGILALAYRGVIHVRGKDCVHPDIGLVIVRMISFPARKSGQRARMAVR
Ga0307497_102797111	3300031226	Soil	MDGRGILALAHRGVTHVRGKDCVHPDIGLVIVRMISFPARESGQR
Ga0299914_106341942	3300031228	Soil	GVIHVRGKDCVHPDIGLVIVRMISFPARESGQRARMAGR
Ga0310887_103086202	3300031547	Soil	GILALAYRGVIHVRGKDCVHPDIGFAIVRMISFPALESGQRARMAVR
Ga0310886_100199431	3300031562	Soil	MLLGLMRRLRKRSLDGRGILALAYRGVIHVRGKDCVHPDIGFAIVRMISFPALESGQRARMAVR
Ga0307405_108449482	3300031731	Rhizosphere	GILALAHRGVTHVRGKDCVHPDIGLVVFRMISFPARKSGQRARRAVR
Ga0310907_100730762	3300031847	Soil	MLLGLMRRLRKRSLDVRGILALAYRGVIHVRGKDCVHPDIGFAIVRMISFPALESGQRARMAVR
Ga0307410_111769921	3300031852	Rhizosphere	FSHCMRSLRRRRMDRRGTLALAHRGVTHVRGKDCVLPDIGFVIVRMISFPARESGQRARMAVPRHGRERSS
Ga0310900_100873081	3300031908	Soil	LTQKALDRRGILALAHRGVTHVRGKDCVHPDIGLVIVRMISFPARESGQRARMAVR
Ga0307412_104816301	3300031911	Rhizosphere	MTACRGQYFSHCMRSLRRGRMDRRGMLALAHRGVTHVRGKDCVLPDIGFVIVRMISFPARESGQR
Ga0310901_105058281	3300031940	Soil	MLLGLRRLRKRCMDRRGILALAYRGVIHVRGKDCVHPDIGLVIVRMISFPARESGQRARMAMR
Ga0310885_100477862	3300031943	Soil	MLLGLMRRLRKRSMDGRGILALAYRGVIHVRGKDCVHPDIGLVIVRMISFPARKSGQRARMAVR
Ga0307409_1018342141	3300031995	Rhizosphere	RRMDRRGILALAHRGVTHVRGKDCVLPDIGFVIVRMISFPARESGQRARMAVPRHGRERS
Ga0310903_107452101	3300032000	Soil	RGILALAHRGVIHVRGKDCVHPDIGRGIVTMISFPARESGQRARKAVR
Ga0310906_104430432	3300032013	Soil	LALAYRGVIHVRGKDCVHPDIGFVIVRMISFPALESGQRARMAVR
Ga0310899_105663811	3300032017	Soil	SLDVRGILALAYRGVIHVRGKDCVHPDIGFAIVRMISFPALESGQRARMAVR
Ga0307470_103096792	3300032174	Hardwood Forest Soil	MLLGLMRRLRKRCMDRRGILALAYRGVIHVRGKDCVHPDIGLVIVRMISFPARESGQRARMAVR
Ga0310889_101081822	3300032179	Soil	MRRLRKRSLDVRGILALAYRGVIHVRGKDCVHPDIGFAIVRMISFPALESGQRARMAVR
Ga0307472_1003714461	3300032205	Hardwood Forest Soil	ILSVARRGVTHVRGKDCVHPDISLVIVRMISFPARESGQRARMAVR
Ga0310810_100271087	3300033412	Soil	DRRDILALAHRGVIHVRGKDCVHPDIGLVIVRMISFPARDSGLRARKAVR
Ga0214471_107164262	3300033417	Soil	MDRRGILALAYRGVIHVRGKDCVHPDIGLVIVRMISFPARESGQRARRAVR
Ga0364929_0268543_8_187	3300034149	Sediment	MRRLRKRCTDRRGILALAYRGVIHVRGKDCVHPDIGLVIVRMISFPARERGQRARMAVR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F049755

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences