Metagenome / Metatranscriptome Family F049784

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F049784
Family Type	Metagenome / Metatranscriptome
Number of Sequences	146
Average Sequence Length	105 residues
Representative Sequence	MRGRLFVFAILVVAPALTFSQSPKPKTHSTITGCLTSTGHPNEYQLVDEKGITNQVYSATVHLDSYVGQSVTLTGDQSATPSTDNGMGRPTPHFKVVKVQPASGDCKK
Number of Associated Samples	92
Number of Associated Scaffolds	146

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	72.60 %
% of genes near scaffold ends (potentially truncated)	32.88 %
% of genes from short scaffolds (< 2000 bps)	77.40 %
Associated GOLD sequencing projects	83
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.61

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (58.219 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (45.206 % of family members)
Environment Ontology (ENVO)	Unclassified (47.260 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (79.452 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 2.21% β-sheet: 29.41% Coil/Unstructured: 68.38%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.61
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.61
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 146 Family Scaffolds
PF10677	DUF2490	15.07
PF00072	Response_reg	2.05
PF01339	CheB_methylest	1.37
PF00484	Pro_CA	1.37
PF00583	Acetyltransf_1	0.68
PF04055	Radical_SAM	0.68
PF14417	MEDS	0.68
PF07228	SpoIIE	0.68
PF00892	EamA	0.68
PF01636	APH	0.68
PF00194	Carb_anhydrase	0.68
PF13620	CarboxypepD_reg	0.68
PF02586	SRAP	0.68
PF05163	DinB	0.68
PF04264	YceI	0.68
PF02743	dCache_1	0.68
PF00589	Phage_integrase	0.68
PF04978	DUF664	0.68
PF16916	ZT_dimer	0.68
PF04203	Sortase	0.68
PF07592	DDE_Tnp_ISAZ013	0.68
PF11999	Ice_binding	0.68
PF04366	Ysc84	0.68
PF10009	DUF2252	0.68
PF07714	PK_Tyr_Ser-Thr	0.68
PF00884	Sulfatase	0.68
PF13557	Phenol_MetA_deg	0.68
PF01370	Epimerase	0.68
PF07366	SnoaL	0.68
PF05853	BKACE	0.68

COG ID	Name	Functional Category	% Frequency in 146 Family Scaffolds
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	2.74
COG2201	Chemotaxis response regulator CheB, contains REC and protein-glutamate methylesterase domains	Signal transduction mechanisms [T]	2.74
COG0288	Carbonic anhydrase	Inorganic ion transport and metabolism [P]	1.37
COG2135	ssDNA abasic site-binding protein YedK/HMCES, SRAP family	Replication, recombination and repair [L]	0.68
COG2318	Bacillithiol/mycothiol S-transferase BstA/DinB, DinB/YfiT family (unrelated to E. coli DinB)	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.68
COG2353	Polyisoprenoid-binding periplasmic protein YceI	General function prediction only [R]	0.68
COG2930	Lipid-binding SYLF domain, Ysc84/FYVE family	Lipid transport and metabolism [I]	0.68
COG2972	Sensor histidine kinase YesM	Signal transduction mechanisms [T]	0.68
COG3246	Uncharacterized conserved protein, DUF849 family	Function unknown [S]	0.68
COG3338	Carbonic anhydrase	Inorganic ion transport and metabolism [P]	0.68
COG3764	Sortase (surface protein transpeptidase)	Cell wall/membrane/envelope biogenesis [M]	0.68

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	58.22 %
Unclassified	root	N/A	41.78 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	58.22 %
Unclassified	root	N/A	41.78 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	58.22 %
Unclassified	root	N/A	41.78 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	43.15 %
Unclassified	root	N/A	41.78 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.68 %
unclassified Bacteria	no rank	All Organisms → cellular organisms → Bacteria → unclassified Bacteria	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.78 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	33.56 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	2.74 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.68 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.78 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	33.56 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.74 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.68 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.78 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	33.56 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.74 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.68 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.78 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.74 %
unclassified Acidobacteriaceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae	0.68 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.68 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.78 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.74 %
Acidobacteriaceae bacterium KBS 89	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium KBS 89	0.68 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.68 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.68 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300003505\|JGIcombinedJ51221_10032645	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1906	Open in IMG/M
3300004091\|Ga0062387_100252906	All Organisms → cellular organisms → Bacteria	1103	Open in IMG/M
3300004101\|Ga0058896_1362601	Not Available	525	Open in IMG/M
3300004631\|Ga0058899_11984043	All Organisms → cellular organisms → Bacteria	1142	Open in IMG/M
3300004631\|Ga0058899_12247442	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	896	Open in IMG/M
3300004631\|Ga0058899_12257548	Not Available	541	Open in IMG/M
3300005439\|Ga0070711_101215708	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	652	Open in IMG/M
3300005534\|Ga0070735_10018880	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium KBS 89	5010	Open in IMG/M
3300005534\|Ga0070735_10077672	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2123	Open in IMG/M
3300005538\|Ga0070731_10080614	All Organisms → cellular organisms → Bacteria	2158	Open in IMG/M
3300005538\|Ga0070731_10950449	Not Available	569	Open in IMG/M
3300005541\|Ga0070733_10149881	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1513	Open in IMG/M
3300005541\|Ga0070733_10367867	Not Available	955	Open in IMG/M
3300005542\|Ga0070732_10435977	Not Available	792	Open in IMG/M
3300005610\|Ga0070763_10160928	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1178	Open in IMG/M
3300005610\|Ga0070763_10825996	Not Available	548	Open in IMG/M
3300005712\|Ga0070764_10835220	Not Available	574	Open in IMG/M
3300005921\|Ga0070766_10368516	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	935	Open in IMG/M
3300005921\|Ga0070766_10907047	Not Available	604	Open in IMG/M
3300006176\|Ga0070765_100206332	All Organisms → cellular organisms → Bacteria	1785	Open in IMG/M
3300006176\|Ga0070765_100665855	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	983	Open in IMG/M
3300009093\|Ga0105240_10174548	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2542	Open in IMG/M
3300009551\|Ga0105238_10306546	All Organisms → cellular organisms → Bacteria	1572	Open in IMG/M
3300010154\|Ga0127503_10794053	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	631	Open in IMG/M
3300010371\|Ga0134125_12219900	Not Available	597	Open in IMG/M
3300010376\|Ga0126381_100930156	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1252	Open in IMG/M
3300011120\|Ga0150983_10705631	Not Available	542	Open in IMG/M
3300011120\|Ga0150983_11607431	Not Available	527	Open in IMG/M
3300011120\|Ga0150983_12427439	Not Available	625	Open in IMG/M
3300011120\|Ga0150983_12871545	Not Available	522	Open in IMG/M
3300011120\|Ga0150983_13142635	Not Available	683	Open in IMG/M
3300011120\|Ga0150983_15522480	Not Available	583	Open in IMG/M
3300011120\|Ga0150983_16015816	Not Available	692	Open in IMG/M
3300013105\|Ga0157369_10082240	All Organisms → cellular organisms → Bacteria → Acidobacteria	3445	Open in IMG/M
3300014495\|Ga0182015_10093516	All Organisms → cellular organisms → Bacteria → Acidobacteria	2095	Open in IMG/M
3300017943\|Ga0187819_10405161	Not Available	784	Open in IMG/M
3300017955\|Ga0187817_10211829	Not Available	1235	Open in IMG/M
3300017995\|Ga0187816_10524923	Not Available	534	Open in IMG/M
3300018007\|Ga0187805_10030026	All Organisms → cellular organisms → Bacteria	2412	Open in IMG/M
3300020579\|Ga0210407_10109159	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2108	Open in IMG/M
3300020579\|Ga0210407_10764375	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	747	Open in IMG/M
3300020580\|Ga0210403_10003298	All Organisms → cellular organisms → Bacteria → Acidobacteria	14290	Open in IMG/M
3300020580\|Ga0210403_10697292	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	814	Open in IMG/M
3300020581\|Ga0210399_10008728	All Organisms → cellular organisms → Bacteria → Acidobacteria	7926	Open in IMG/M
3300020581\|Ga0210399_10389253	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1163	Open in IMG/M
3300020581\|Ga0210399_10841605	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	747	Open in IMG/M
3300020582\|Ga0210395_10093636	All Organisms → cellular organisms → Bacteria	2218	Open in IMG/M
3300020582\|Ga0210395_10749829	Not Available	729	Open in IMG/M
3300020583\|Ga0210401_10017243	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	6964	Open in IMG/M
3300020583\|Ga0210401_10034001	All Organisms → cellular organisms → Bacteria	4849	Open in IMG/M
3300020583\|Ga0210401_10059818	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3589	Open in IMG/M
3300020583\|Ga0210401_10129575	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2364	Open in IMG/M
3300020583\|Ga0210401_10300353	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1466	Open in IMG/M
3300020583\|Ga0210401_10522659	Not Available	1049	Open in IMG/M
3300020583\|Ga0210401_10596240	All Organisms → cellular organisms → Bacteria → Acidobacteria	966	Open in IMG/M
3300020583\|Ga0210401_10601363	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	961	Open in IMG/M
3300020583\|Ga0210401_10893438	Not Available	747	Open in IMG/M
3300020583\|Ga0210401_10898679	Not Available	745	Open in IMG/M
3300021168\|Ga0210406_10077877	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2840	Open in IMG/M
3300021171\|Ga0210405_10002949	All Organisms → cellular organisms → Bacteria	17055	Open in IMG/M
3300021171\|Ga0210405_10039186	All Organisms → cellular organisms → Bacteria	3772	Open in IMG/M
3300021171\|Ga0210405_10276976	All Organisms → cellular organisms → Bacteria	1326	Open in IMG/M
3300021180\|Ga0210396_10221415	All Organisms → cellular organisms → Bacteria	1687	Open in IMG/M
3300021180\|Ga0210396_11462643	Not Available	563	Open in IMG/M
3300021181\|Ga0210388_10068704	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2982	Open in IMG/M
3300021181\|Ga0210388_10409357	Not Available	1192	Open in IMG/M
3300021401\|Ga0210393_10344468	All Organisms → cellular organisms → Bacteria → Acidobacteria	1213	Open in IMG/M
3300021403\|Ga0210397_10077514	All Organisms → cellular organisms → Bacteria → Acidobacteria	2194	Open in IMG/M
3300021403\|Ga0210397_10144358	All Organisms → cellular organisms → Bacteria	1658	Open in IMG/M
3300021403\|Ga0210397_10869658	Not Available	697	Open in IMG/M
3300021405\|Ga0210387_10144449	All Organisms → cellular organisms → Bacteria → Acidobacteria	2030	Open in IMG/M
3300021405\|Ga0210387_11658448	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	542	Open in IMG/M
3300021407\|Ga0210383_11465703	Not Available	566	Open in IMG/M
3300021420\|Ga0210394_10980501	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	733	Open in IMG/M
3300021432\|Ga0210384_10111542	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2451	Open in IMG/M
3300021432\|Ga0210384_10549043	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1039	Open in IMG/M
3300021474\|Ga0210390_10000973	All Organisms → cellular organisms → Bacteria → Acidobacteria	28877	Open in IMG/M
3300021475\|Ga0210392_10087934	All Organisms → cellular organisms → Bacteria → Acidobacteria	2016	Open in IMG/M
3300021475\|Ga0210392_10857928	Not Available	679	Open in IMG/M
3300021478\|Ga0210402_10114641	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2431	Open in IMG/M
3300021478\|Ga0210402_10118827	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2388	Open in IMG/M
3300021478\|Ga0210402_10184702	All Organisms → cellular organisms → Bacteria	1912	Open in IMG/M
3300021478\|Ga0210402_10366439	All Organisms → cellular organisms → Bacteria → Proteobacteria	1337	Open in IMG/M
3300021478\|Ga0210402_10584491	Not Available	1035	Open in IMG/M
3300021478\|Ga0210402_11054757	Not Available	740	Open in IMG/M
3300022499\|Ga0242641_1025256	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	624	Open in IMG/M
3300022499\|Ga0242641_1039908	Not Available	542	Open in IMG/M
3300022508\|Ga0222728_1025918	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	879	Open in IMG/M
3300022527\|Ga0242664_1063700	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	699	Open in IMG/M
3300022529\|Ga0242668_1076402	Not Available	644	Open in IMG/M
3300022530\|Ga0242658_1068734	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	790	Open in IMG/M
3300022532\|Ga0242655_10161007	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	664	Open in IMG/M
3300022532\|Ga0242655_10255888	Not Available	556	Open in IMG/M
3300022533\|Ga0242662_10122667	Not Available	763	Open in IMG/M
3300022533\|Ga0242662_10321436	Not Available	521	Open in IMG/M
3300022712\|Ga0242653_1051053	Not Available	672	Open in IMG/M
3300022717\|Ga0242661_1044375	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	811	Open in IMG/M
3300022721\|Ga0242666_1163589	Not Available	551	Open in IMG/M
3300022724\|Ga0242665_10105483	Not Available	842	Open in IMG/M
3300022726\|Ga0242654_10106137	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	889	Open in IMG/M
3300024225\|Ga0224572_1011868	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1650	Open in IMG/M
3300025906\|Ga0207699_10905738	Not Available	651	Open in IMG/M
3300025913\|Ga0207695_10124360	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2543	Open in IMG/M
3300025929\|Ga0207664_11676794	Not Available	558	Open in IMG/M
3300027090\|Ga0208604_1008013	All Organisms → cellular organisms → Bacteria	1002	Open in IMG/M
3300027109\|Ga0208603_1028886	All Organisms → cellular organisms → Bacteria	874	Open in IMG/M
3300027173\|Ga0208097_1005268	All Organisms → cellular organisms → Bacteria	1333	Open in IMG/M
3300027502\|Ga0209622_1094615	Not Available	547	Open in IMG/M
3300027783\|Ga0209448_10239673	Not Available	599	Open in IMG/M
3300027842\|Ga0209580_10556165	Not Available	570	Open in IMG/M
3300027853\|Ga0209274_10325573	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	791	Open in IMG/M
3300027855\|Ga0209693_10516205	Not Available	570	Open in IMG/M
3300027867\|Ga0209167_10233896	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	984	Open in IMG/M
3300027867\|Ga0209167_10547229	Not Available	634	Open in IMG/M
3300027869\|Ga0209579_10103704	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1507	Open in IMG/M
3300027869\|Ga0209579_10820314	Not Available	502	Open in IMG/M
3300027884\|Ga0209275_10138325	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1281	Open in IMG/M
3300027889\|Ga0209380_10054042	Not Available	2280	Open in IMG/M
3300027889\|Ga0209380_10636424	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	616	Open in IMG/M
3300027986\|Ga0209168_10019047	All Organisms → cellular organisms → Bacteria	3905	Open in IMG/M
3300028023\|Ga0265357_1014931	Not Available	818	Open in IMG/M
3300028906\|Ga0308309_10776388	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	833	Open in IMG/M
3300029636\|Ga0222749_10147268	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1145	Open in IMG/M
3300029701\|Ga0222748_1056038	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	687	Open in IMG/M
3300030738\|Ga0265462_12291078	Not Available	534	Open in IMG/M
3300030740\|Ga0265460_12422571	Not Available	557	Open in IMG/M
3300030741\|Ga0265459_14045148	Not Available	514	Open in IMG/M
3300031128\|Ga0170823_16030564	Not Available	572	Open in IMG/M
3300031231\|Ga0170824_106581230	Not Available	590	Open in IMG/M
3300031231\|Ga0170824_110240675	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1007	Open in IMG/M
3300031474\|Ga0170818_100783745	Not Available	545	Open in IMG/M
3300031708\|Ga0310686_107353611	Not Available	747	Open in IMG/M
3300031708\|Ga0310686_115552502	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4416	Open in IMG/M
3300031708\|Ga0310686_117303987	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	13324	Open in IMG/M
3300031718\|Ga0307474_11264104	Not Available	583	Open in IMG/M
3300031720\|Ga0307469_12048981	Not Available	556	Open in IMG/M
3300031754\|Ga0307475_10948653	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	678	Open in IMG/M
3300031754\|Ga0307475_11557007	Not Available	506	Open in IMG/M
3300031820\|Ga0307473_11543488	Not Available	505	Open in IMG/M
3300031823\|Ga0307478_10720007	Not Available	836	Open in IMG/M
3300031962\|Ga0307479_10010262	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	8694	Open in IMG/M
3300031962\|Ga0307479_10544313	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1144	Open in IMG/M
3300032174\|Ga0307470_11032053	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	656	Open in IMG/M
3300032180\|Ga0307471_100128490	All Organisms → cellular organisms → Bacteria	2382	Open in IMG/M
3300032180\|Ga0307471_102121037	Not Available	707	Open in IMG/M
3300032205\|Ga0307472_100294817	All Organisms → cellular organisms → Bacteria	1300	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	95.89%
Host-Associated	Host-Associated	4.11%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	91.10%
Aquatic	Environmental → Aquatic	4.79%
Plants	Host-Associated → Plants	4.11%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	91.10%
Freshwater	Environmental → Aquatic → Freshwater	4.79%
Rhizosphere	Host-Associated → Plants → Rhizosphere	4.11%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	68.49%
Loam	Environmental → Terrestrial → Soil → Loam	21.92%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	4.11%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	3.42%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.68%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.68%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.68%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	56.16%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	19.86%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	12.33%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	3.42%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	2.74%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.05%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	1.37%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.68%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.68%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.68%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	45.21%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	10.96%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	8.90%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	8.90%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	8.22%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	2.74%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	2.74%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.05%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	2.05%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.37%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.37%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.68%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.68%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.68%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	0.68%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.68%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.68%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.68%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	0.68%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004101	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF228 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004631	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF234 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005534	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1	Environmental	Open in IMG/M
3300005538	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1	Environmental	Open in IMG/M
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005712	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300010154	Soil microbial communities from Willow Creek, Wisconsin, USA - WC-WI-TBF metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300013105	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG	Host-Associated	Open in IMG/M
3300014495	Permafrost microbial communities from Stordalen Mire, Sweden - 712P3M metaG	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017995	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_1	Environmental	Open in IMG/M
3300018007	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_5	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300022499	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-14-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022508	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-19-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022527	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-4-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022529	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022530	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022532	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-4-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022533	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-7-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022712	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-32-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022717	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-11-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022721	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-4-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022724	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-17-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022726	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300024225	Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic ? CZU5	Host-Associated	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025913	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300027090	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF016 (SPAdes)	Environmental	Open in IMG/M
3300027109	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF008 (SPAdes)	Environmental	Open in IMG/M
3300027173	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF036 (SPAdes)	Environmental	Open in IMG/M
3300027502	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027783	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027842	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027853	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1 (SPAdes)	Environmental	Open in IMG/M
3300027855	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3 (SPAdes)	Environmental	Open in IMG/M
3300027867	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027869	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027884	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300027986	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300028023	Rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE5	Host-Associated	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300029701	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030738	Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada VDE Co-assembly	Environmental	Open in IMG/M
3300030740	Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada ARE Co-assembly	Environmental	Open in IMG/M
3300030741	Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada ANR Co-assembly	Environmental	Open in IMG/M
3300031128	Oak Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGIcombinedJ51221_100326453	3300003505	Forest Soil	MRVRLFVFAILVVAPALTFSQSPKTKTHQTITGCLTSTGSSHEYQLVDEKGVTNIVYSTTVHLNSYVGKSVSLVGDQSATPSTDTGTARPMPHFKVVKVQPASGNCKK*
Ga0062387_1002529061	3300004091	Bog Forest Soil	MRRRLFVLALLVAVPGLAFSQSPKPRTHSKVTGCLTSTSQPDEYRLVDEKKITNIVYSGTIHLDSYVGKFVTLTGDKSATPSTDTGTARPMPHFRVVEVQPASGSCQK*
Ga0058896_13626011	3300004101	Forest Soil	LFVFAILVVAPALTFSQSPKTKTHSTVTGCLTSTGQPNEYQLADEKRITNLVYSATVHLDSYVGKSVTLTGEKDATPSTDNGMGQPTPHFKVVKVQPASGECKK*
Ga0058899_119840432	3300004631	Forest Soil	MRGSLFVLAILLVAPALAFSQSPKPKTHKTITGCLTSTSQPDEYRLVDEKGVTNIVYSVTIHLDSYVGQSVTLTGDQSATPSTDTGTGRPTPHFKVLEVKAASGSCKK*
Ga0058899_122474422	3300004631	Forest Soil	MRGSLFMLAILMVAPVLAQSPNPKTHQTITGCLTSTGSSHEYQLVDEKGVTNIVYSTTVHLNSYVGKSVSLVGDQSATPSTDTGTAQPMPHFKVVKVQPASGDCKK*
Ga0058899_122575481	3300004631	Forest Soil	VFAILAVAPALTFSQTPKPTTHSTITGCLTSTGHPNECQLVDEKGITNQVYSGTVHLDSYVGQFVTLTGDQSATPSTDNGMGRPTPHFKIAKVKPASGDCKK*
Ga0070711_1012157081	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	AVAPVLAFSQSSKPKLHSRITGCLSGTGRPYEYQLLDEKGVMNLIYSVTVHLDSYVGQSVTLAGDQSAMPSTDAGQAHPSTHFKVLRVYSASGNCKK*
Ga0070735_100188803	3300005534	Surface Soil	MRGRLFVLAVLVVAPVLAFCQSPKHQSKITGCLTAGQPNNYRLVDQRGVTNYVYSDSVSVHLNSYVGQSVTLVGDQSAMTGTDTGTARTSRHFKVVEVQPASGKCKK*
Ga0070735_100776721	3300005534	Surface Soil	SQSPKPKSHSKITGCLIGTGQPDEYQLVDEKGVTNLVYSVTIHLNSYIGQSVTLIGDQSATPSTDTGTARPSPHFRVLKVQPASGNCKK*
Ga0070731_100806141	3300005538	Surface Soil	MRGRLFVFAILVVAPALTFSQSPKTKTHSTVTGCLTSTGQPNEYQLVDQKGITSLVYSTTVQLDSYVGKSVTLTGEKDATPSADNGMGRPTPHFKAVKAQPASGDCKK*
Ga0070731_109504491	3300005538	Surface Soil	MRRSLLVLAILVVTPALSFSQSPKPKTHSTITGCLTSSDHPDEYRLVDEKGVTNIVYSVSVHLDSYVGQSVALTGDQSATPSTDTGTAQPMPHFKVVKVKPASGTCKK*
Ga0070733_101498811	3300005541	Surface Soil	MRRRLFVFAILAVVPALTFSQSPKAKTHSTITGCLTSTGHPNEYQLVDEKGITNQVYSTTVHLDSYVGQSVTLTGDQSATPSTDNGMGRPTPHFKAVKVQPASGDCKK*
Ga0070733_103678672	3300005541	Surface Soil	MLAILMVAPVLAQSPNPKTHQTITGCLTSTGSSHEYQLVDEKGVTSIVYSTTVHLNSYVGKSVSLVGDQSATPSTDTGTGRPMPHFKVVKVQPASGDCKK*
Ga0070732_104359772	3300005542	Surface Soil	MRGRLFVLAVLVVAPALAFSQSPKHQSKITGCLTAGQPNDYRLVDQRGVTNYVYSDSVSVHLNSYVGQSVTLIGDQSAMTGTDTGTARTSRHFKVVEVQPASGKCKK*
Ga0070763_101609282	3300005610	Soil	MRRSLFMLAILMVAPVLAQSPNPKTHQTITGCLTSTGSSHEYQLVDEKGVTNIVYSTTVHLNSYVGKSVSLVGDQSATPSTDTGTAQPMPHFKVVKVQPASGDCKK*
Ga0070763_108259962	3300005610	Soil	LVVAPALTFSQTSKPKTHSTITGCLTSTGHPNEYQLVDEKGITNQVYSATVHLDSYVGQSVTLTGDQSATPSTDNGMGRPTPHFKVVKVQPASGDCKK*
Ga0070764_108352201	3300005712	Soil	MLAILMVAPVLAQSPNPKTHQTITGCLTSTGSSHEYQLVDEKGVTNIVYSTTVHLNSYVGKSVSLVGDQSATPSTDTGTAQPMPHFKVVKVQPASG
Ga0070766_103685162	3300005921	Soil	MRRRLFVFAILVVAPALTFSQTSKPKTHSTITGCLTSTGHPNEYQLVDEKGITNQVYSATVHLDSYVGQSVTLTGDQSATPSTDNGMGRPTPHFKVVKVQPASGDCKK*
Ga0070766_109070472	3300005921	Soil	LEVCHERKSIYAGILMVAPVLAQSPNPKTHQTITGCLTSTGSSHEYQLVDEKGVTNIVYSTTVHLNSYVGKSVSLVGDQSATPSTDTGTAQPMPHFKVVKVQPASGDCKK*
Ga0070765_1002063323	3300006176	Soil	VLAQSPNPKTHQTITGCLTSTGSSHEYQLVDEKGVTNIVYSTTVHLNSYVGKSVSLVGDQSATPSTDTGTGRPMPHFKVVEVQPASGDCKK*
Ga0070765_1006658552	3300006176	Soil	MRGSRLLVLACILVVTPALSFSQSPKPKTHSTITGCLTSGDHPDEYRLVDEKGVTNIVYSVSVHLDSYVGQSVALTGDQSARPSTDTGTAQPMPHFKVVKVKPA
Ga0105240_101745482	3300009093	Corn Rhizosphere	MGEKALVLAILLVAPALTFSQSPEPKSHSKITGCLTSTGRPHEYRLVDEKGVTNQVYSTTVHLNSFVGKSVTLIGDQSARPSTDTGTARPTPHFKVIKAQAGSGDCKK*
Ga0105238_103065461	3300009551	Corn Rhizosphere	MGGKALVLAILVVAPALTFSQSPEPKSHSKITGCLTSTGRPHEYRLVDEKGVTNQVYSTTVHLNSFVGKSVTLIGDQSARPSTDTGTARPTPHFKVIKAQAGSGDCKK*
Ga0127503_107940531	3300010154	Soil	GRLCVFAILVVAPALTFSQSPKTTTHSTVTGCLTSTGQPNEYQLVDEKGITKQVYSGTVHLDSYVGQSVTLTGDQSATPSTDNGMGRPTPHFKVVKVQPASGDCKK*
Ga0134125_122199001	3300010371	Terrestrial Soil	SPEPKSHSKITGCLTSTGRPHEYRLVDEKGVTNQVYSTTVHLNSFVGKSVTLIGDQSARPSTDTGTARPTPHFKVIKAQAGSGDCKK*
Ga0126381_1009301562	3300010376	Tropical Forest Soil	MTRRLVVLAIMMVASVLAFSQSPKPKTYSTITGCLTSGSQPDEYHLVDGKGVTNIVYSVKVHLDSYVGQSVTLTGDKSAMPSTDTGTGKPMPHFRVEEVKAASGSCKK*
Ga0150983_107056312	3300011120	Forest Soil	MRGRLFVFAILAVAPALTFSQTPKPTTHSTITGCLTSTGHPNECQLVDEKGITNQVYSGTVHLDSYVGQFVTLTGDQSATPSTDNGMGRPTPHFKIAKVKPASGDCKK*
Ga0150983_116074311	3300011120	Forest Soil	MRGRLFVFAILVVAPALTFSQSPKTKTHSTVTGCLTSTGQPNEYQLADEKRITNLVYSATVHLDSYVGKSVTLTGEKDATPSTDNGMGQPTPHFKVVKVQPASGECKK*
Ga0150983_124274392	3300011120	Forest Soil	MRVRLLVLAIIVVAPVLAFSQSPKPKTHSKITGCLISADQPHEYRLVDEKGITNQVYSGTLHLDSYVGQSVTLIGDQSAMPSTDTGTGRPTPHFKVIKVQPASGDCKK*
Ga0150983_128715451	3300011120	Forest Soil	MLAILVVAPALAFSQSPKPKTHSKITGCLTSTGKPDEYRLVDEKGVTNQVYSVTVHLDPYVGQAVTLTGDQSAMPSTDTGTARPTPHFKVVEVQPASANCKK*
Ga0150983_131426351	3300011120	Forest Soil	MRGRLFVLAVLVVAPALAFSQSPKHQSKITGCLTTGQPNDYRLVDQRGVTNYVHSDSDSVHLDSYVGQFVTLIGDQSAMTGTDTGTARTSRHFKVVEVQPASGKCKK*
Ga0150983_155224801	3300011120	Forest Soil	MRGRLFVLAILVAAPVLAFSQSPKQKTHRKITGCLTRADQSDEYRLVDEKGITNHVESVRVHLDSYVGQSVTLIGDQSAMPSTDNGRPEPHFNVVKVKPSSGNCKK*
Ga0150983_160158162	3300011120	Forest Soil	MRGRLFVFAILVVAPALTFSQSPKPKTHSTITGCLTSTGHPNEYQLVDEKGITNQVYSATVHLDSYVGQSVTLTGDQSATPSTDNGMGRPTPHFKVVKVQPASGDCKK*
Ga0157369_100822401	3300013105	Corn Rhizosphere	MGEKALVLAILVVAPALTFSQSPEPKSHSKITGCLTSTGRPHEYRLVDEKGVTNQVYSTTVHLNSFVGKSVTLIGDQSARPSTDTGTARPTPHFKVIKAQAGSGDCKK*
Ga0182015_100935163	3300014495	Palsa	MRGKLFVFAILVVPPTLAFSQSPKPKTHSKITGCLTSNSQPDEYQLVDEKGVMNLVYSATVHLDSYVGQSVTLTGDQSATPSTDTGTGRPTPHFKVVKVQPASGSCKK*
Ga0187819_104051611	3300017943	Freshwater Sediment	MRVRLFVLAIMVVAPAIAFSQSPKPKTHGKITGCLTSTGQPDQYRLVDEKGVMNEVYSVSVHLDSYVGQSVTLTGDQSATPSTDTGTARPTPHFKVVKVEPPPGNCKK
Ga0187817_102118291	3300017955	Freshwater Sediment	MRGRLFVLAILLVAPALAFSQSPKQKAHNKITGCLTSADQPDEYLLVDEKGVTNQVYSVTIHLDSYVGKSVTLIGDQSAVPNTDTGTARPMPHFKVVKVQPRSGTCKK
Ga0187816_105249231	3300017995	Freshwater Sediment	MRGRLFVLAILLVAPALAFSQSPKQKTHNKITGCLTSADQPDEYLLVDEKGVTNQVYSVTIHLDSYVGKSVTLIGDQSAVPNTDTGTARPMPHFKVVKVRPASGN
Ga0187805_100300264	3300018007	Freshwater Sediment	MRVRLFVLAIMVVAPAIAFSQSPKPKTHSKITGCLTSTGQPDQYRLVDEKGVMNEVYSVSVHLDSYVGQSVTLTGDQSATPSTDTGTARPTPHFKVVKVEPAPGNCKK
Ga0210407_101091592	3300020579	Soil	MRGSLFMLAILMVAPVLAQSPNPKTHQTITGCLTSTGSSHEYQLVDEKGVKNIVYSATVHLNSYVGKSVSLVGDKSATPSTDTGTAQPMPHFKVVKVQPASGDCKK
Ga0210407_107643752	3300020579	Soil	MRGRLFVFAILVVAPALTFSQSPKTKTHSTVTGCLTSTGQPNEYQLADEKRITNLVYSATVHLDSYVGKSVTLTGEKDATPSTDNGMGQPTPHFKVVKVQPASGECKK
Ga0210403_100032989	3300020580	Soil	MRGRLFVLAILVVAPALTFSQSPKAKTHSTITGCLTSAGQPNEYQLVDEKGITNLVYSVTVHLDSYVGKSVTLTGDQDATPSTDNGMGRPTPHFKVVKVQSASGDCKK
Ga0210403_106972921	3300020580	Soil	MRGSLLVLAILVVTPALAFSQSPKQKTHSTITGCLTSGVQPNEYELVDEKGVANIVYSVSVHLDSYVGKSVTLTGDQSAMPSSDSAAGRPMPHFKVIKVKPGSGSCKK
Ga0210399_100087282	3300020581	Soil	MRRRLFVYAILVVAPALTFSQSPKTKTHSTVTGCLTSTGQPNEYQLVDEKGITNLVYSATVHLDSYVGKSVTLTGEKDATPSADNGMGRPTPHFKVVKVQPASGDCKK
Ga0210399_103892532	3300020581	Soil	MRGSLLVLAILVVTPALAFSQSPKQKTHSTITGCLTSGFQHDEYELVDEKGVANIVYSVSVHLDSYVGKSVTLTGDQSATPSSDSAAGRPMPHFKVIKVKPASGSCKK
Ga0210399_108416052	3300020581	Soil	MRGRLFVFAILAVAPALTFSQTPKPTTHSTITGCLTSTGHPNECQLVDEKGITNQVYSGTVHLDSYVGQFVTLTGDQSATPSTDNGMGRPTPHFKIAKVKPASGDCKK
Ga0210395_100936361	3300020582	Soil	MRRSLFMLAILMVAPVLAQSPNPKTHQTITGCLTSTGSSHEYQLVDEKGVTNIVYSTTVHLNSYVGKSVSLVGDQSATPSTDTGTAQPMPHFKVVKVQPASGDCKK
Ga0210395_107498291	3300020582	Soil	MRGRLLVLAVLVAAPALGFSQSPKHQSKITGCLTAGQPNDYRLVDQRGVTNYVHSDTDSVHLDSYVGQFVTLIGDQSAMTGTDTGTARTSRHFKVVEVQPASGTCKK
Ga0210401_100172432	3300020583	Soil	VLAVLVVAPALAFSQSPNPKTHSKITGCLTSTGHPNEYQLVDEKGITNQVYSATVHLDSYVGQSVTLTGDQSATPSTDNGMGRPTPHFKVVKVQPASGDCKK
Ga0210401_100340013	3300020583	Soil	MRVRLFVFAILVVAPALTFSQSPKTKTHQTITGCLTSTGSSHEYQLVDEKGVTNIVYSTTVHLNSYVGKSVSLVGDQSATPSTDTGTARPMPHFKVVKVQPASGNCKK
Ga0210401_100598184	3300020583	Soil	MRGRLFVLAILVVTPALALSQSPKQKNHSKIAGCLTSTGQPDEYQLVDKKGVTNLVYSTSVHLDSYVGQSVTLIGDQSATPSTDTGTGRPKPHFKVVEVKPASGSCK
Ga0210401_101295754	3300020583	Soil	MRGSLFMLAILMVAPVLAQSPNPKTHQTITGCLTSTGSSHEYQLVDEKGVTSIVYSTTVHLNSYVGKSVSLVGDQSATPSTDTGTGRPMPHFKVVKVQPASGDCKK
Ga0210401_103003532	3300020583	Soil	MKESLLVLALLVVTPALAFSQSPKQKTHSTITGCLTSGFQPDEYRLVDEKGVTNLVYSVSVHLDSYVGKSVTLTGDQSATPSTDSAAGQPMPHFKVIKVKPASGSCKK
Ga0210401_105226591	3300020583	Soil	MRGSLLVLAILVVTPALALSQSPKPKTHSTITGCLTHTSQPDEYRLVDENGVTNVVYSVTVHLDSYVGQSVTLTGDQSATPSTDTGTARPMPHFKVLKVKPASGSCKN
Ga0210401_105962401	3300020583	Soil	MRGSLFVLAILVVTLAPAFSQSPKQKTHSKITGCLTSTSQPDEHRRVDKKGVTNLVYSTSVHLDSYVGQSVTLIGDQSATPSTDTGTA
Ga0210401_106013631	3300020583	Soil	YRDFSVASWRCVMRRSLLVLAILVVTPALAFSQSPKPKTHSTITGCLTSGDHPDEYRLVDEKGVTNIVYSVSVHLDSYVGQSVALTGDQSATPSTDTGTGRPMPHFKVVKVKAASGTCKK
Ga0210401_108934381	3300020583	Soil	MRGSLFMLAILMVAPVLAQSPNPKTHQTITGCLTSTGSSHEYQLVDEKGVKNIVYSATVHLNSYVGKSVSLVGDQSATPSTDTGTAQPMPHFKVVKVQPASGDCKK
Ga0210401_108986792	3300020583	Soil	MRVRLLVLAIIVVAPVLAFSQSPKPKTHSKITGCLISADQPHEYRLVDEKGITNQVYSGTLHLDSYVGQSVTLIGDQSAMPSTDTGTGRPTPHFKVIKVQPASGDCKK
Ga0210406_100778774	3300021168	Soil	MRRSLLVLAILVVTPALAFSQSPKPKTHSTITGCLTSGDHPDEYRLVDEKGVTNIVYSVSVHLDSYVGQSVALTGDQSATPSTDTGTGRPMPHFKVVKVKAASGTCKK
Ga0210405_1000294914	3300021171	Soil	MRGSLSMLAILIVAPALAQSPNPKTHQTISGCLTSTGSSHEYQLVDEKGVTNIVYSTTVHLNSYVGKSVSLVGDQSATPSTDTGTAQPMPHFKVVKVQPASGDCKK
Ga0210405_100391864	3300021171	Soil	MRGSLSMLAILMVAPVLAQSPNPKTHQTITDCLTSTGSSHEYQLVDENGVTNIVYSTTVHLNSDVGKSVSLVGDQSATPSTDTGTGRPMPHFKVVKVQPASGDCKK
Ga0210405_102769763	3300021171	Soil	MRGSLFMLAILMVAPVLAQSPNPKTHQTITGCLTSTGSSHEYQLVDENGVTNIVYSTTVHLNTYVGKSVSLVGDQSATPSTDTGTGRPM
Ga0210396_102214152	3300021180	Soil	MRGRPFVLAVLVVAPALAFSQSPNPKTHSKITGCLTSTGHPNEYQLVDEKGITNQVYSATVHLDSYVGQSVTLTGDQSATPSTDNGMGRPTPHFKVVKVQPASGDCKK
Ga0210396_114626431	3300021180	Soil	MRGSLLVLAILVVTPALAFSQSPKQKTHSTITGCLTSGVQPNEYELVDEKGVANIVYSVSVHLDSYVGKSVTLTGDQSAMPSSDSAAGRPMPHFKV
Ga0210388_100687042	3300021181	Soil	MLAILMVAPVLAQSPNPKTHQTITGCLTSTGSSHEYQLVDEKGVTNIVYSATVHLNSYVGKSVSLVGDKSATPSTDTGTAQPMPHFKVVKVQPASGDCKK
Ga0210388_104093572	3300021181	Soil	MRRRLFVFAILVVAPALTFSQTPKPKTHSTITGCLTSSGHSDEYQLVDEKGVTNLVYSVTVHLDSYVGKSVTLTGDQDATPSTDSGMGRPTPHFKVVKVQPASGDCKK
Ga0210393_103444682	3300021401	Soil	MRRSLLVLAILVVTPALSFSQSPKPKTHSTITGCLTSGDHPDEYRLVDEKGVTNIVYSVSVHLDSYVGQSVALTGDQSATPSTDTGTAQPMPHFKVVKVKPASGTCKK
Ga0210397_100775142	3300021403	Soil	MRGTLFVPAILVAASVFAFSQSPKPKTHVKITGCLASSGHPDEYQLVDEKGITNLVYSGTIHLDSYIGQSVTLFGDQSAMPSTDTGTAQPMPHFKVAKVQPAHGDCKK
Ga0210397_101443584	3300021403	Soil	MRGSLLVLASLVVTSALAFSQSPRPKTHSTITGCLTHTSQPDEYRLVDESGVTNIVYSVTVHLDSYVGQSVILSGDQSATPSTDTGTAQ
Ga0210397_108696582	3300021403	Soil	MLAILMVAPVLAQSPNPKTHQTITGCLTSTGSSHEYQLVDEKGVTNIVYSTTVHLNSYVGKSVSLVGDQSATPSTDTGTAQPMPHFKVVKVQPASGDCKK
Ga0210387_101444491	3300021405	Soil	SQTTKPKTHSTITGCLTSSGHSDEYQLVDEKGVTNLVYSVTVHLDSYVGKSVTLTGDQDATPSTDSGMGRPTPHFKVVKVQPASGDCKK
Ga0210387_116584482	3300021405	Soil	SPKTKTHSTITGCLTSAGQPNEYQLVDEKGITNLVYSVTVHLDSYVGKSVTLTGDQDATPSTDNGMGRPTPHFKVVKVQSASGDCKK
Ga0210383_114657031	3300021407	Soil	FSQSPKTTTHSTITGCLTSTGQPNEYQLVDEKGITNLVYSVTVHLDSYVGKSVTLTGDQDATPSTDSGMGRPTPHFKVVKVQPASGDCKK
Ga0210394_109805011	3300021420	Soil	LMVAPVLAQSPNPKTHQTITGCLTSTGSSHEYQLVDEKGVTSIVYSTTVHLNSYVGKSVSLVGDQSATPSTDTGTGRPMPHFKVVKVQPASGNCKK
Ga0210384_101115424	3300021432	Soil	MRGRLFVLAILVVTPALALSQSPKQKNHSKITGCLTSAGQPDEYQLVDKKGVTNLVYSTSVHLDSYVGQSVTLIGDQSATPSTDTGTGRPKPHFKVVEVKPASGSCK
Ga0210384_105490431	3300021432	Soil	MRGSLLVLAILVVTPALAFSQSPKPKTHSTITGCLTHTSQPDEYRLVDENGVTNVVYSVTVHLDSYVGQSVTLTGDQSATPSTDTGTARPMPHFKVLKVKPASGSCKN
Ga0210390_1000097318	3300021474	Soil	MRGRLFVFAILAVAPALTFSQTPKPTTHSTITGCLTSTGHPNECQLVDEKGITNQVYSGTVHLDSYVGQFVTLTGDQSATPSTDNGMGRPTPHFRS
Ga0210392_100879344	3300021475	Soil	MRRSLLVLAILVVTPALAFSQSPKPKTHSTITGCLTSGDHPDEYRLVDEKGVTNIVYSVSVHLDSYVGQSVALTGDQSATPSTDTGTAQPMPHFKVVKVKPASGTCKK
Ga0210392_108579281	3300021475	Soil	MRGSRLLVLACILVVTPALSFSQSPKPKTHSTISGCLTSGDHPDEYRLVDEKGVTNIVYSVSVHLDSYVGQSVTLSGDRSATPSTDTGTAQPMPHFKVVKVKP
Ga0210402_101146413	3300021478	Soil	MRGRLCVFAILVVAPALTFSQSPKTTTHSTVTGCLTSTGQPNEYQLVDEKGITNLVYSATVHLDSYVGKSVTLTGDKGATPSTDNGMTGRPTPHFKVVKVQPASGDCKK
Ga0210402_101188273	3300021478	Soil	MRRRLFVFVMLLVAPALTFSQSPKTTTHSTITGCLTSTGQPNEYQLVDEKGITNLVYSATVHLDSYVGKSVTLTGDRGATASTDNGMTGRPTPHFKVVKVQPASGDCKK
Ga0210402_101847022	3300021478	Soil	MLTGAMRGGLFVLAIMVVAPVLAFGQSPKPRTHSKITGCLSGTDHPDEYQLVDEKGVTNLVYSVTVHLDSYVGQFVTLTGDQSATPSTDTGTAQPSPHFKVLKVHSASGNCKK
Ga0210402_103664392	3300021478	Soil	MRRRLFVFAILVVAPALTFSQTTKPKTHSTITGCLTSSGHSDEYQLVDEKGVTNLVYSVTVHLDSYVGKSVTLTGDQDATPSTDSGMGRPTPHFKVVKVQPASGDCKK
Ga0210402_105844911	3300021478	Soil	MLTGAMRGRLFVLAILVAAPVLAFGQSPKPRTHSKITGCLSGTDHPDEYQLADEKGVTNLVYSVTVHFDSNVGQFVTLTGDQSATPSTDTGTARPSPHFKVLKVHSASGNCNG
Ga0210402_110547571	3300021478	Soil	MLAILMVAPVLAQSPNPKTHQTITGCLTSTGSSHEYQLVDEKGVTNIVYSATVHLNSYVGKSVSLVGDQSATPSTDTGTAQPMPHFKVVKVQPASGDCKK
Ga0242641_10252561	3300022499	Soil	YVMRGSLSMLAILMVAPVLAQSPNPKTHQTITGCLTSTGSSHEYQLVDEKGTTNIVYSTTVHLNSYVGKSVSLVGDQSATPSTDTGTGRPMPHFKVVKVQPASGDCKK
Ga0242641_10399082	3300022499	Soil	RGRLFVFAILAVAPALTFSQTPKPTTHSTITGCLTSTGHPNECQLVDEKGITNQVYSGTVHLDSYVGQFVTLTGDQSATPSTDNGMGRPTPHFKVVKVQPASGDCKK
Ga0222728_10259182	3300022508	Soil	VLAQSPKPRTHQTITGCLTSTGSRHEYRLVDEKGVTNIVYSTTVHLNSYVGKSVSLVGDQSATPSTDTGTAQPMPHFKVVKVQPASGDCKK
Ga0242664_10637001	3300022527	Soil	FHVVSRRCVMRGSLSMLAILIVAPALAQSPNPKTHQTISGCLTSTGSSHEYQLVDEKGVTNIVYSTTVHLNSYVGKSVSLVGDQSATPSTDTGTARPMPHFKVVKVQPASGNCKK
Ga0242668_10764021	3300022529	Soil	MRVRLFVFAILVVAPALTFSQSPKTKTHQTITGCLTSTGSSHEYQLVDEKGVTNSVYSTTVHLNSYVGKSVSLVGDQSATPSTDTGTARPMPHFKVVKVQPASGNCKK
Ga0242658_10687341	3300022530	Soil	KSFHVVSWRSVMRGSLFMLAILMVAPVLAQSPNPKTHQTITGCLTSTGQPNEYQLVDEKGITNLVYSATVHLDSYVGKSVTLTGDKGATPSTDNGMTGRPTPHFKVVKVQPASGDCKK
Ga0242655_101610072	3300022532	Soil	VMRGSLFMLAILMVAPVLAQSPNPKTHQTITGCLTSTGSSHEYQLVDEKGVTNIVYSTTVHLNSYVGKSVSLVGDQSATPSTDTGTAQPMPHFKVVKVQPASGDCKK
Ga0242655_102558882	3300022532	Soil	LFVYAILVVAPALTFSQSPKTKTHSTVTGCLTSTGQPNEYQLVDEKGITNLVYSATVHLDSYVGKSVTLTGEKDATPSADNGMGRPTPHFKVVKVQPASGDCKK
Ga0242662_101226672	3300022533	Soil	YRGFSRSTEVCHEGNLLVLAILVVTPALAFSQSPKPKTHSTITGCLTHTSQPDEYRLVDESGVTNIVYSVTVHLDSYVGKSVTLTGDQDATPSTDSGMGRPTPHFKVVKVQPASGDCKK
Ga0242662_103214361	3300022533	Soil	MRRRLFVFAILVVAPALTFSQSPKTKTHSTVTGCLTSTGQPNEYQLVDEKGITNLVYSATVHLDSYVGKSVTLTGEKDATPSADNGMGRPTPHFKVVKVQPASGDCKK
Ga0242653_10510531	3300022712	Soil	VRLFVFAILVVAPALTFSQSPKTKTHQTISGCLTSTGSSHEYQLVDEKGVTNIVYSTTVHLNSYVGKSVSLVGDQSATPSTDTGTARPMPHFKVVKVQPASGNCKK
Ga0242661_10443751	3300022717	Soil	MRVRLFVFAILVVAPALTFSQSPKTKTHQTITGCLTSTGSSHEYQLVDEKGVTNIVYSTTVHLNSYVGKSVSLVGDQSATPSTDTGTAQPMPHFKVVKVQPASGDCKK
Ga0242666_11635892	3300022721	Soil	LSMLAILMVAPVLAQSPNPKTHQTITGCLTSTGSSHEYQLVDEKGVTNIVYSTTVHLNSYVGKSVSLVGDQSATPSTDTGTAQPMPHFKVVKVQPASGDCKK
Ga0242665_101054832	3300022724	Soil	MRGSLLVLAILVVTPALVFSQSPKQKTHSTITGCLTSGVQPNEYELVDEKGVANIVYSVSVHLDSYVGKSVTLTGDQSAMPSSDSAAGRPMPHFKVIKVKPGSGSCKK
Ga0242654_101061371	3300022726	Soil	SQSPKTTTHSTVTGCLTSTGQPNEYQLVDEKGITNLVYSATVHLDSYVGKSVTLTGEKDATPSADNGMGRPTPHFKVVKVQPASGDCKK
Ga0224572_10118681	3300024225	Rhizosphere	MRGSLFMLAILMVAPVLAQSPNPKTHQTITGCLTSTGSSHEYQLVDEKGVTNIVYSTTVHLDSSVGKSVTLTGDQDATPSTDNGMGRPTPHFKVVKVQPSSGDCKK
Ga0207699_109057382	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	RRRIFVLAILMVAPALVFSQSPQHQSKITGCLTAGKPDDYRLVDQRGVTNYVYSSTVHLNSYVGQSVTLIGDQSAMTGTDTGTAKPTRHFKVVEVQPASGKCGK
Ga0207695_101243602	3300025913	Corn Rhizosphere	MGEKALVLAILLVAPALTFSQSPEPKSHSKITGCLTSTGRPHEYRLVDEKGVTNQVYSTTVHLNSFVGKSVTLIGDQSARPSTDTGTARPTPHFKVIKAQAGSGDCKK
Ga0207664_116767941	3300025929	Agricultural Soil	MRGSLFVLAMLVVVPVFTFSQSPEPKTHSKITGCLTSTGQPHEYRLVDERGVTNQVYSTTVHLDSYVGESVTLIGNQSATPSADTGTGRPTPHFKVVKVQL
Ga0208604_10080132	3300027090	Forest Soil	MRGSLFMLAILMVAPVLAQSPNPKTHQTITGCLTSTGSSHEYQLVDEKGVTNIVYSTTVHLNSYVGQSVSLVGDQSATPSTDTGTGRPMPHFKVVKVQPASGDCKK
Ga0208603_10288862	3300027109	Forest Soil	MRGSLFMLAILIVAPVLAQSPNPKTHQTITGCLTSTGSSHEYQLVDEKGVTNIVYSTTVHLNSYVGKSVSLVGDQSATPSTDTGTARPMPHFKVVKVQPASGN
Ga0208097_10052682	3300027173	Forest Soil	MRGSLFMVAILMVAPVLAQSPKTKTHQTITGCLTSTGSSHEYQLVDEKGVTNIVYSTTVHLNSYVGKSVSLVGDQSATPSTDTGTARPMPHFKVVKVQPASGNCKK
Ga0209622_10946151	3300027502	Forest Soil	LVMRGRLFALVILVVAPVLAFSQSPKPKTHSKITGCLTSTGDPEGYQLVDEKGITNLVYSATLHLDSYVGQSVTLIGDQSAMPSTDTGTARPMPHFRVLKVHPASGNCKK
Ga0209448_102396731	3300027783	Bog Forest Soil	MRRRLFVLALLVAVPGLAFSQSPKPRTHSKVTGCLTSTSQPDEYRLVDEKKITNIVYSGTIHLDSYVGKFVTLTGDKSATPSTDTGTARPMPHFRVVEVQPASGSCQK
Ga0209580_105561651	3300027842	Surface Soil	MRGRLFVLAVLVVAPVLAFCQSPKHQSKITGCLTAGQPNDYRLVDQRGVTNYVYSDSVSVHLNSYVGQSVTLIGDQSAMTGTDTGTARTSRHFKVVEVQPASGKCKK
Ga0209274_103255731	3300027853	Soil	MLAILMVAPVLAQSPNPKTHQTITGCLTSTGSSHEYQLVDENGVTNIVYSTTVHLNSYVGKSVSLVGDQSATPSTDTGTGRPMPHFKVVKVQPASGDCKKSN
Ga0209693_105162052	3300027855	Soil	RRLFVFAILVVAPALTFSQTSKPKTHSTITGCLTSTGHPNEYQLVDEKGITNQVYSATVHLDSYVGQSVTLTGDQSATPSTDNGMGRPTPHFKVVKVQPASGDCKK
Ga0209167_102338961	3300027867	Surface Soil	MRRRLFVFAILAVVPALTFSQSPKAKTHSTITGCLTSTGHPNEYQLVDEKGITNQVYSTTVHLDSYVGQSVTLTGDQSATPSTDNGMGRPTPHFKAVKVQPASGDCKK
Ga0209167_105472291	3300027867	Surface Soil	MLAILMVAPVLAQSPNPKTHQTITGCLTSTGSSHEYQLVDEKGVTSIVYSTTVHLNSYVGKSVSLVGDQSATPSTDTGTGRPMPHFKVVKVQPASGDCKK
Ga0209579_101037041	3300027869	Surface Soil	MRGRLFVFAILVVAPALTFSQSPKTKTHSTVTGCLTSTGQPNEYQLVDQKGITSLVYSTTVQLDSYVGKSVTLTGEKDATPSADNGMGRPTPHFKAVKAQPASGDCKK
Ga0209579_108203141	3300027869	Surface Soil	MRRSLLVLAILVVTPALSFSQSPKPKTHSTITGCLTSSDHPDEYRLVDEKGVTNIVYSVSVHLDSYVGQSVALTGDQSATPSTDTGTAQPMPHFKVVKVKPASGTCKK
Ga0209275_101383252	3300027884	Soil	MRGSLFMVAILMVAPVLAQSPKTKTHQTITGCLTSTGSSHEYQLVDEKGVTNIVYSTTVHLNSYVGKSVSLVGDQSATPSTDTGTGRPMPHFKVVEVQPASGDCKK
Ga0209380_100540422	3300027889	Soil	MRRRLFVFAILVVAPALTFSQTSKPKTHSTITGCLTSTGHPNEYQLVDEKGITNQVYSATVHLDSYVGQSVTLTGDQSATPSTDNGMGRPTPHFKVVKVQPASGDCKK
Ga0209380_106364242	3300027889	Soil	SPNPKTHQTITGCLTSTGSSHEYQLVDEKGVTNIVYSTTVHLNSYVGKSVSLVGDQSATPSTDTGTAQPMPHFKVVKVQPASGDCKK
Ga0209168_100190474	3300027986	Surface Soil	MRGRLFVLAVLVVAPVLAFCQSPKHQSKITGCLTAGQPNNYRLVDQRGVTNYVYSDSVSVHLNSYVGQSVTLVGDQSAMTGTDTGTARTSRHFKVVEVQPASGKCKK
Ga0265357_10149311	3300028023	Rhizosphere	MLAILMVAPVLAQSPNPKTHQTITGCLTSTGSSHEYQLVDEKGVTNIVYSTTVHLNSYVGKSVTLTGDQDATPSADNGMGRPTPHFKVVKAQPGSGDCKK
Ga0308309_107763881	3300028906	Soil	TPALSFSQSPKPKTHSTISGCLTSGDHPDEYRLVDEKGVTNIVYSVSVHLDSYVGQSVTLSGDRSATPSTDTGTAQPMPHFKVVKVKPASGTCKK
Ga0222749_101472682	3300029636	Soil	MRVRLFVFAILVVAPALTFSQSPKTKTHSTVTGCLTSTGQPNEYQLVDEKGITNLVYSATVHLDSYVGKSVTLTGEKDATPSADNGMGRPTPHFKVVKVQPASGDCKK
Ga0222748_10560382	3300029701	Soil	MRGSLFMLAILMVAPVLAQSPNPKTHQTITGCLTSTGSSHEYKLVDENGVTNIVYSTTVHLNPYVGKSVTLTGDQDATPSTDNGMGRPTPHFKVVKAQPGSGDCKK
Ga0265462_122910781	3300030738	Soil	RAGAEAFQVVSWRCVMRGSLFMLAILMVAPVLAQSPKTKTHQTITGCLTSTGSSHEYQLVDEKGVTNIVYSTTVHLNSYVGQSVSLVGDQSATPSTDTGTAQPMPHFKVVKVQPASGDCK
Ga0265460_124225711	3300030740	Soil	YVMRGRLFMLAILMVAPVLAQSPNPKTHQTITGCLTSTGSSHEYQLVDEKGVTNIVYSTTVHLNSYVGKSVSLVGDQSATPSTDTGTAQPMPHFKVVKVQPASGHCKK
Ga0265459_140451481	3300030741	Soil	MRGRLFVFAILVVAAALAFSQSPKPKTHSTITGCLTSTGQPDEYRLADEKGVTNQVYSVTVHLDSYVGQSVTLTGDQSSTPSTDTGTGRPAPHFKVVKVQPAPGDCKK
Ga0170823_160305641	3300031128	Forest Soil	MRGRLFVFAILVVAPALTFSQSPKPKTHSTITGCLTSAGQPNEYQLVDEKGITSLVYSTTVQLDSYVGKSVTLTGEKDATPSADNGMGRPTPHFKVVKVQPASGDCKK
Ga0170824_1065812301	3300031231	Forest Soil	MRGTLFVPAILVAASVFAFSQSPKPKTHVKITGCLASSGHPDEYQLVDEKGITNLVYSGTIHLDSYIGQSVTLIGDQSAMPSTDTGTAQPMPHFKVAKVQPAHGDCKK
Ga0170824_1102406752	3300031231	Forest Soil	MRGRLFVFAILVVAPALTFSQSPKPKTHSTITGCLTSAGQPNEYQLVDEKGITNLVYSVTVHLDSYVGKSVTLTGDQDATPSTDNGMGRPTPHFKVVKVQPASGDCKK
Ga0170818_1007837452	3300031474	Forest Soil	MRGTLFVLAILVAAPVFGFSQSPKPKTHVKITGCLASSGHPDEYQLVDEKGITNLVYSGTIHLDSYIGQSVTLIGDQSAMPSTDTGTAQPMPHFKVAKVQPAHGDCKK
Ga0310686_1073536112	3300031708	Soil	MRGRLFVFAILVVAPALTFSQSPKPKTHSTITGCLTSTGHPNEYQLVNEKGITNQVYSGTVHLDSYVGQSVTLIGDQSAMPSTDTGTGRPTPHFKVLKVQPASGNCKK
Ga0310686_1155525025	3300031708	Soil	MRGKLFVLAILVVPPALAFSQSPKPKTHSKITGCLTSNSQPDEYQLVDEKGVTNMVYSATVHLDSYVGQSVTLTGDQSATPSTDTGTGRPTPHFKVVKVQPASGSCKK
Ga0310686_1173039873	3300031708	Soil	MLAILMVAPVLAQSPNPKTHQTITGCLTSTGSSHEYQLVDEKGVTNIVYSTTVHLNSYVGKSVTLTGDQDATPSTDNGMGRPTPHFKVVKVQPASGDCKK
Ga0307474_112641041	3300031718	Hardwood Forest Soil	MRGSLLVLAILVVTPALAFSQSPKQKTHSTITGCLTSGAQPNEYELVDEKGVANIVYSVSVHLDSYVGKSVTLTGDQSAMPSSDSAAGRPMPHFKVIKVKPGSGSCKK
Ga0307469_120489811	3300031720	Hardwood Forest Soil	VLAILVVAPALAFSQSPKPKTHNTITGCLTSTDQPGEYGVVDENGVMNHVYSVTVHLDSYVGQSVTLIGDLSAMPSTDTGTARPTPTFKVVKVQPASGNCKK
Ga0307475_109486532	3300031754	Hardwood Forest Soil	VLAILVVAPAFAFSQSPKPKTHSTITGCLTSGDQSDEYRLVDEKGVTNLVYSVTIHLNSYVGQSVILTGDQSAMPSTDTGTGRPTPHFKVVKVKPAPGSCKK
Ga0307475_115570071	3300031754	Hardwood Forest Soil	MRGRLFVLAVLLVAPALAFGQSPKHQSKITGCLTAGQPNDYRLVDQRGVTNYVYSDSVSVHLNSYVGQSVTLIGDQSAMTGTDTGTARTSRHFKVVEV
Ga0307473_115434881	3300031820	Hardwood Forest Soil	MRGSLLVLAILVVTPALAFSQSPKQKTHSTITGCLTSGFQPNEYELVDEKGVAYIVYSVSVHLDSYVGKSVTLTGDQSAMPTSDSAAGRPMPHFKVIKVKPASGSCKK
Ga0307478_107200072	3300031823	Hardwood Forest Soil	MRGRLFVLAVLLVAPALAFSQSPKHHSKITGCLTAGQPNDYRLVDQRGVTNYVYSDSVSVHLNSYVGQSVTLIGDQSAMTGTDTGTARTSRHFKVVEVQPASGK
Ga0307479_100102623	3300031962	Hardwood Forest Soil	MRGRLFVLAILVVTPALALSQSPKQKNHSKITGCLTSTGQPDEYQLVDKKGITNLVYSTSVYLDSYVGQSVTLIGDQSATPSTDTGTGRPKPHFKVVEVKPASGSCK
Ga0307479_105443131	3300031962	Hardwood Forest Soil	MRGSLLVLAILVVTPALAFSQSPKQKTHSTITGCLTSGFQPNEYELVDEKGVAYIVYSVSVHLDSYVGKSVTLTGDQSAMPSSDSAAGRPMPHFKVIKVKPGSGSCQK
Ga0307470_110320532	3300032174	Hardwood Forest Soil	MRGSLLVLAILVVTPALAFSQSPKQKTHSTITGCLTSGFQPDEYELVDEKGVANIVYSVSVHLDSYVGKSVTLTGDQSAMPTSDSAAGRPMPHFKVIKVKPASGSCKK
Ga0307471_1001284904	3300032180	Hardwood Forest Soil	MRGSLLVLAILVVTPALAFSQSPKQKTHSTITGCLTSGFQPNEYELVDEKGVANIVYSVSVHLDSYVGKSVTLTGDQSAMPSSDSAAGRPMPHFKVIKVKPGSGSCKK
Ga0307471_1021210371	3300032180	Hardwood Forest Soil	MRGRLCVFAILVVAPALTFSQSPKTTTHSTVTGCLTSTGQPNEYQLVDEKGITNLVYSATVHLDSYVGKSVTLTGDKGATPSTDNGMTGRPTPHSRS
Ga0307472_1002948172	3300032205	Hardwood Forest Soil	MRGRLFVFAILVVAPALSFSQSPKTQTHSTVTGCLTSTGQPNEYQLVDEKGITNLVYSATVHLDSYVGKSVTLTGDKGATPSTDNGMTGRPTPHFKVVKVQPASGDCKK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F049784

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences