Metagenome / Metatranscriptome Family F049813

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F049813
Family Type	Metagenome / Metatranscriptome
Number of Sequences	146
Average Sequence Length	51 residues
Representative Sequence	MIKVKQLSYALLLGGIAITAAYSQDTASEYVAPPDAGPKGKAPRMKVQ
Number of Associated Samples	111
Number of Associated Scaffolds	146

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	81.51 %
% of genes near scaffold ends (potentially truncated)	93.15 %
% of genes from short scaffolds (< 2000 bps)	95.21 %
Associated GOLD sequencing projects	104
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.34

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (88.356 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (30.137 % of family members)
Environment Ontology (ENVO)	Unclassified (43.151 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (43.151 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Fibrous	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 32.89% β-sheet: 0.00% Coil/Unstructured: 67.11%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.34
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.34
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 146 Family Scaffolds
PF07690	MFS_1	28.08
PF00085	Thioredoxin	21.92
PF00190	Cupin_1	10.96
PF16576	HlyD_D23	3.42
PF14833	NAD_binding_11	2.05
PF03479	PCC	1.37
PF03446	NAD_binding_2	1.37
PF03916	NrfD	0.68
PF07731	Cu-oxidase_2	0.68
PF00248	Aldo_ket_red	0.68
PF07883	Cupin_2	0.68
PF12700	HlyD_2	0.68
PF00873	ACR_tran	0.68
PF10604	Polyketide_cyc2	0.68
PF01471	PG_binding_1	0.68

COG ID	Name	Functional Category	% Frequency in 146 Family Scaffolds
COG1661	Predicted DNA-binding protein with PD1-like DNA-binding motif, PPC/DUF296 domain	General function prediction only [R]	1.37
COG2132	Multicopper oxidase with three cupredoxin domains (includes cell division protein FtsP and spore coat protein CotA)	Cell cycle control, cell division, chromosome partitioning [D]	0.68

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	88.36 %
Unclassified	root	N/A	11.64 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	88.36 %
Unclassified	root	N/A	11.64 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	88.36 %
Unclassified	root	N/A	11.64 %

Name	Rank	Taxonomy	Distribution
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	41.10 %
Unclassified	root	N/A	11.64 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.37 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.68 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	41.10 %
Unclassified	root	N/A	11.64 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.68 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.68 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.68 %

Name	Rank	Taxonomy	Distribution
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	36.99 %
Unclassified	root	N/A	11.64 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.68 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.68 %
Spartobacteria	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria	0.68 %
Verrucomicrobiae	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae	0.68 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.68 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	36.99 %
Unclassified	root	N/A	11.64 %
Chthoniobacterales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales	0.68 %
Verrucomicrobiales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	0.68 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.68 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.68 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.68 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	36.99 %
Unclassified	root	N/A	11.64 %
Chthoniobacteraceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae	0.68 %
Verrucomicrobia subdivision 3	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3	0.68 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.68 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.68 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.68 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	36.99 %
Unclassified	root	N/A	11.64 %
Candidatus Udaeobacter	genus	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter	0.68 %
Pedosphaera	genus	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera	0.68 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.68 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.68 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.68 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	36.99 %
Unclassified	root	N/A	11.64 %
unclassified Candidatus Udaeobacter	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → unclassified Candidatus Udaeobacter	0.68 %
Pedosphaera parvula	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula	0.68 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.68 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.68 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.68 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	36.99 %
Unclassified	root	N/A	11.64 %
Candidatus Udaeobacter sp.	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → unclassified Candidatus Udaeobacter → Candidatus Udaeobacter sp.	0.68 %
Pedosphaera parvula	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula	0.68 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.68 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.68 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.68 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000364\|INPhiseqgaiiFebDRAFT_100228456	All Organisms → cellular organisms → Bacteria	713	Open in IMG/M
3300000789\|JGI1027J11758_12555945	All Organisms → cellular organisms → Bacteria	794	Open in IMG/M
3300000955\|JGI1027J12803_102242986	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → unclassified Candidatus Udaeobacter → Candidatus Udaeobacter sp.	845	Open in IMG/M
3300002568\|C688J35102_118661776	Not Available	582	Open in IMG/M
3300005167\|Ga0066672_10862762	All Organisms → cellular organisms → Bacteria	564	Open in IMG/M
3300005174\|Ga0066680_10940756	All Organisms → cellular organisms → Bacteria	510	Open in IMG/M
3300005180\|Ga0066685_10326564	Not Available	1064	Open in IMG/M
3300005181\|Ga0066678_10630106	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	714	Open in IMG/M
3300005184\|Ga0066671_10921150	Not Available	553	Open in IMG/M
3300005289\|Ga0065704_10268758	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	948	Open in IMG/M
3300005293\|Ga0065715_11025113	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	537	Open in IMG/M
3300005294\|Ga0065705_10735205	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	637	Open in IMG/M
3300005328\|Ga0070676_10601429	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	793	Open in IMG/M
3300005355\|Ga0070671_100583767	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	965	Open in IMG/M
3300005355\|Ga0070671_101500024	Not Available	596	Open in IMG/M
3300005447\|Ga0066689_10553602	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	727	Open in IMG/M
3300005450\|Ga0066682_10448365	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	821	Open in IMG/M
3300005468\|Ga0070707_100968623	All Organisms → cellular organisms → Bacteria	816	Open in IMG/M
3300005540\|Ga0066697_10357835	Not Available	850	Open in IMG/M
3300005559\|Ga0066700_10212379	All Organisms → cellular organisms → Bacteria	1341	Open in IMG/M
3300005559\|Ga0066700_10351655	Not Available	1040	Open in IMG/M
3300005560\|Ga0066670_10473222	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	772	Open in IMG/M
3300005574\|Ga0066694_10149823	All Organisms → cellular organisms → Bacteria	1106	Open in IMG/M
3300005576\|Ga0066708_10799786	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	592	Open in IMG/M
3300005586\|Ga0066691_10415383	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	801	Open in IMG/M
3300005586\|Ga0066691_10522288	Not Available	709	Open in IMG/M
3300006028\|Ga0070717_12097308	All Organisms → cellular organisms → Bacteria	509	Open in IMG/M
3300006046\|Ga0066652_100369865	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1297	Open in IMG/M
3300006046\|Ga0066652_100909481	Not Available	839	Open in IMG/M
3300006175\|Ga0070712_100403535	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1129	Open in IMG/M
3300006796\|Ga0066665_10105068	All Organisms → cellular organisms → Bacteria	2078	Open in IMG/M
3300006796\|Ga0066665_11354105	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	549	Open in IMG/M
3300006800\|Ga0066660_10563965	All Organisms → cellular organisms → Bacteria	955	Open in IMG/M
3300006800\|Ga0066660_11164786	Not Available	607	Open in IMG/M
3300007255\|Ga0099791_10048600	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1897	Open in IMG/M
3300007255\|Ga0099791_10214769	All Organisms → cellular organisms → Bacteria	908	Open in IMG/M
3300007258\|Ga0099793_10328875	All Organisms → cellular organisms → Bacteria	745	Open in IMG/M
3300007258\|Ga0099793_10635101	Not Available	536	Open in IMG/M
3300009012\|Ga0066710_100435906	All Organisms → cellular organisms → Bacteria	1962	Open in IMG/M
3300009012\|Ga0066710_104640930	All Organisms → cellular organisms → Bacteria	513	Open in IMG/M
3300009038\|Ga0099829_10732902	All Organisms → cellular organisms → Bacteria	821	Open in IMG/M
3300009137\|Ga0066709_104498853	All Organisms → cellular organisms → Bacteria	509	Open in IMG/M
3300009143\|Ga0099792_10923714	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	579	Open in IMG/M
3300009553\|Ga0105249_10479205	All Organisms → cellular organisms → Bacteria	1287	Open in IMG/M
3300010326\|Ga0134065_10469333	All Organisms → cellular organisms → Bacteria	518	Open in IMG/M
3300010371\|Ga0134125_11236842	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	816	Open in IMG/M
3300010373\|Ga0134128_10545943	All Organisms → cellular organisms → Bacteria	1291	Open in IMG/M
3300010400\|Ga0134122_11485964	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	696	Open in IMG/M
3300011269\|Ga0137392_11090009	All Organisms → cellular organisms → Bacteria	655	Open in IMG/M
3300012198\|Ga0137364_10244310	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1325	Open in IMG/M
3300012198\|Ga0137364_10255986	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1294	Open in IMG/M
3300012200\|Ga0137382_10392715	All Organisms → cellular organisms → Bacteria	977	Open in IMG/M
3300012200\|Ga0137382_10447990	All Organisms → cellular organisms → Bacteria	913	Open in IMG/M
3300012201\|Ga0137365_10096758	All Organisms → cellular organisms → Bacteria	2222	Open in IMG/M
3300012202\|Ga0137363_10209529	All Organisms → cellular organisms → Bacteria	1567	Open in IMG/M
3300012203\|Ga0137399_10961243	All Organisms → cellular organisms → Bacteria	719	Open in IMG/M
3300012203\|Ga0137399_11076488	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	677	Open in IMG/M
3300012205\|Ga0137362_10236144	All Organisms → cellular organisms → Bacteria	1578	Open in IMG/M
3300012205\|Ga0137362_10484925	All Organisms → cellular organisms → Bacteria	1069	Open in IMG/M
3300012205\|Ga0137362_10489643	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1064	Open in IMG/M
3300012205\|Ga0137362_11079236	All Organisms → cellular organisms → Bacteria	683	Open in IMG/M
3300012207\|Ga0137381_11529875	Not Available	559	Open in IMG/M
3300012208\|Ga0137376_10271587	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1471	Open in IMG/M
3300012208\|Ga0137376_11543297	All Organisms → cellular organisms → Bacteria	555	Open in IMG/M
3300012208\|Ga0137376_11779153	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	507	Open in IMG/M
3300012210\|Ga0137378_10114853	All Organisms → cellular organisms → Bacteria	2481	Open in IMG/M
3300012285\|Ga0137370_10947060	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	532	Open in IMG/M
3300012582\|Ga0137358_10571585	All Organisms → cellular organisms → Bacteria	759	Open in IMG/M
3300012917\|Ga0137395_11093469	All Organisms → cellular organisms → Bacteria	565	Open in IMG/M
3300012918\|Ga0137396_11317458	All Organisms → cellular organisms → Bacteria	500	Open in IMG/M
3300012922\|Ga0137394_11007313	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	692	Open in IMG/M
3300012924\|Ga0137413_10177947	All Organisms → cellular organisms → Bacteria	1413	Open in IMG/M
3300012924\|Ga0137413_10436199	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	950	Open in IMG/M
3300012924\|Ga0137413_10581271	All Organisms → cellular organisms → Bacteria	836	Open in IMG/M
3300012925\|Ga0137419_11355364	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	599	Open in IMG/M
3300012929\|Ga0137404_11221350	All Organisms → cellular organisms → Bacteria	692	Open in IMG/M
3300012930\|Ga0137407_10785410	All Organisms → cellular organisms → Bacteria	899	Open in IMG/M
3300012957\|Ga0164303_10961446	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	604	Open in IMG/M
3300012957\|Ga0164303_11418550	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	520	Open in IMG/M
3300012960\|Ga0164301_11471599	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	560	Open in IMG/M
3300012960\|Ga0164301_11583486	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	543	Open in IMG/M
3300012961\|Ga0164302_10156375	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1350	Open in IMG/M
3300012961\|Ga0164302_11572055	All Organisms → cellular organisms → Bacteria	545	Open in IMG/M
3300012986\|Ga0164304_11144181	All Organisms → cellular organisms → Bacteria	625	Open in IMG/M
3300014969\|Ga0157376_12900975	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	519	Open in IMG/M
3300015245\|Ga0137409_11492411	All Organisms → cellular organisms → Bacteria	524	Open in IMG/M
3300015264\|Ga0137403_11029650	Not Available	670	Open in IMG/M
3300015359\|Ga0134085_10436951	All Organisms → cellular organisms → Bacteria	592	Open in IMG/M
3300015372\|Ga0132256_103854175	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	504	Open in IMG/M
3300018071\|Ga0184618_10201572	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	832	Open in IMG/M
3300018071\|Ga0184618_10299781	All Organisms → cellular organisms → Bacteria	684	Open in IMG/M
3300018431\|Ga0066655_10314828	Not Available	1021	Open in IMG/M
3300018433\|Ga0066667_11258645	All Organisms → cellular organisms → Bacteria	645	Open in IMG/M
3300019874\|Ga0193744_1026664	All Organisms → cellular organisms → Bacteria	1086	Open in IMG/M
3300019881\|Ga0193707_1042671	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1462	Open in IMG/M
3300019882\|Ga0193713_1171658	Not Available	570	Open in IMG/M
3300019882\|Ga0193713_1205200	All Organisms → cellular organisms → Bacteria	501	Open in IMG/M
3300019999\|Ga0193718_1039944	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1032	Open in IMG/M
3300020004\|Ga0193755_1206555	All Organisms → cellular organisms → Bacteria	556	Open in IMG/M
3300020010\|Ga0193749_1039670	All Organisms → cellular organisms → Bacteria	911	Open in IMG/M
3300020170\|Ga0179594_10036067	All Organisms → cellular organisms → Bacteria	1607	Open in IMG/M
3300020579\|Ga0210407_11041011	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	623	Open in IMG/M
3300021411\|Ga0193709_1014359	All Organisms → cellular organisms → Bacteria	1951	Open in IMG/M
3300021411\|Ga0193709_1094723	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	648	Open in IMG/M
3300021413\|Ga0193750_1008529	All Organisms → cellular organisms → Bacteria	2628	Open in IMG/M
3300021413\|Ga0193750_1091251	Not Available	540	Open in IMG/M
3300021475\|Ga0210392_10052823	All Organisms → cellular organisms → Bacteria	2511	Open in IMG/M
3300022756\|Ga0222622_10091562	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1847	Open in IMG/M
3300022756\|Ga0222622_10519719	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	852	Open in IMG/M
3300024288\|Ga0179589_10307025	All Organisms → cellular organisms → Bacteria	715	Open in IMG/M
3300024288\|Ga0179589_10597956	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	517	Open in IMG/M
3300025919\|Ga0207657_10270296	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1351	Open in IMG/M
3300025922\|Ga0207646_10912408	Not Available	779	Open in IMG/M
3300025928\|Ga0207700_11706685	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	555	Open in IMG/M
3300025933\|Ga0207706_10158903	All Organisms → cellular organisms → Bacteria	1987	Open in IMG/M
3300025938\|Ga0207704_10479765	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	998	Open in IMG/M
3300025938\|Ga0207704_11976258	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	502	Open in IMG/M
3300026301\|Ga0209238_1181178	All Organisms → cellular organisms → Bacteria	620	Open in IMG/M
3300026324\|Ga0209470_1183140	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	902	Open in IMG/M
3300026331\|Ga0209267_1057333	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1738	Open in IMG/M
3300026529\|Ga0209806_1031762	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula	2617	Open in IMG/M
3300026542\|Ga0209805_1341271	All Organisms → cellular organisms → Bacteria	569	Open in IMG/M
3300026542\|Ga0209805_1377785	All Organisms → cellular organisms → Bacteria	543	Open in IMG/M
3300026548\|Ga0209161_10201001	All Organisms → cellular organisms → Bacteria	1101	Open in IMG/M
3300026557\|Ga0179587_10602477	All Organisms → cellular organisms → Bacteria	723	Open in IMG/M
3300026820\|Ga0207603_102630	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	703	Open in IMG/M
3300027605\|Ga0209329_1017212	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1434	Open in IMG/M
3300027643\|Ga0209076_1119522	All Organisms → cellular organisms → Bacteria	744	Open in IMG/M
3300027727\|Ga0209328_10143774	Not Available	726	Open in IMG/M
3300027903\|Ga0209488_10476571	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	917	Open in IMG/M
3300027903\|Ga0209488_10558208	All Organisms → cellular organisms → Bacteria	834	Open in IMG/M
3300028381\|Ga0268264_12341239	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	541	Open in IMG/M
3300028807\|Ga0307305_10489742	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	552	Open in IMG/M
3300030855\|Ga0075374_10738470	All Organisms → cellular organisms → Bacteria	504	Open in IMG/M
3300031057\|Ga0170834_102782985	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1384	Open in IMG/M
3300031057\|Ga0170834_106536084	All Organisms → cellular organisms → Bacteria	686	Open in IMG/M
3300031231\|Ga0170824_121200847	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1032	Open in IMG/M
3300031231\|Ga0170824_128874458	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1086	Open in IMG/M
3300031446\|Ga0170820_14191767	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	923	Open in IMG/M
3300031469\|Ga0170819_15749835	All Organisms → cellular organisms → Bacteria	1129	Open in IMG/M
3300031753\|Ga0307477_10248658	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1232	Open in IMG/M
3300031754\|Ga0307475_10654143	All Organisms → cellular organisms → Bacteria	839	Open in IMG/M
3300031754\|Ga0307475_10726514	All Organisms → cellular organisms → Bacteria	791	Open in IMG/M
3300031820\|Ga0307473_11173638	All Organisms → cellular organisms → Bacteria	569	Open in IMG/M
3300032180\|Ga0307471_100132529	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2352	Open in IMG/M
3300032180\|Ga0307471_100903605	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1050	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	91.10%
Host-Associated	Host-Associated	8.90%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	88.36%
Plants	Host-Associated → Plants	8.90%
Aquatic	Environmental → Aquatic	2.74%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	88.36%
Rhizosphere	Host-Associated → Plants → Rhizosphere	5.48%
Rhizoplane	Host-Associated → Plants → Rhizoplane	3.42%
Sediment	Environmental → Aquatic → Sediment	2.74%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	82.88%
Loam	Environmental → Terrestrial → Soil → Loam	5.48%
Soil	Host-Associated → Plants → Rhizosphere → Soil	4.11%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.74%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.05%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.37%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.37%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	47.26%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	24.66%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	10.27%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	4.11%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.42%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.74%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.05%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.37%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.37%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.37%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.68%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.68%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	30.14%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	20.55%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	13.01%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	4.11%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	4.11%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	4.11%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.42%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.05%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.05%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.37%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.37%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.37%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.37%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.37%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.37%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.37%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.68%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.68%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.68%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere	0.68%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	0.68%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.68%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.68%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.68%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.68%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.68%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000789	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005184	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120	Environmental	Open in IMG/M
3300005289	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2	Host-Associated	Open in IMG/M
3300005293	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1	Host-Associated	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005450	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119	Environmental	Open in IMG/M
3300005574	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143	Environmental	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300010326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015359	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09182015	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300018071	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300019874	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1a1	Environmental	Open in IMG/M
3300019881	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3c2	Environmental	Open in IMG/M
3300019882	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H3a2	Environmental	Open in IMG/M
3300019999	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a1	Environmental	Open in IMG/M
3300020004	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1a2	Environmental	Open in IMG/M
3300020010	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1s2	Environmental	Open in IMG/M
3300020170	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300021411	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H3c2	Environmental	Open in IMG/M
3300021413	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1c1	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300024288	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal	Environmental	Open in IMG/M
3300025919	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026324	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125 (SPAdes)	Environmental	Open in IMG/M
3300026331	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137 (SPAdes)	Environmental	Open in IMG/M
3300026529	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152 (SPAdes)	Environmental	Open in IMG/M
3300026542	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148 (SPAdes)	Environmental	Open in IMG/M
3300026548	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155 (SPAdes)	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300026820	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-SCHO21-A (SPAdes)	Environmental	Open in IMG/M
3300027605	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_M3 (SPAdes)	Environmental	Open in IMG/M
3300027643	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3 (SPAdes)	Environmental	Open in IMG/M
3300027727	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028807	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_186	Environmental	Open in IMG/M
3300030855	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - OA9 Emin (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031469	Fir Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPhiseqgaiiFebDRAFT_1002284562	3300000364	Soil	MIKVKHLSYALLLGGIAITAAYSQDTASEYVAPPDASPKGKAPGMKVQLLNP
JGI1027J11758_125559453	3300000789	Soil	MTALKQLTYALLLGGMTTATGYSQDTASEYVAPPDAGPKGKAP
JGI1027J12803_1022429861	3300000955	Soil	MTKIKQLSYALSLLGIAITTAYSQDTASEYVAPPDAGPKGKA
C688J35102_1186617761	3300002568	Soil	MFILKQLSYALVLVGLVVPRGGSQNTASEYVAPPDAGPKGTAPRMKVQLLNPGEGVKQYAVIF
Ga0066672_108627621	3300005167	Soil	MITVKQLTYALLLGGIATAAAYSQDTANEYVAPPDAGPKGKAPRMKVQLLN
Ga0066680_109407562	3300005174	Soil	MINMKKLNYALLLDGIAIATAYSQNKDSEYVAPPDAGPKARLRG*
Ga0066685_103265642	3300005180	Soil	MINMRQLSYALLLGGIAIATAYSQDKASEYVAPPDAGPKGKAPRMKVQLL
Ga0066678_106301062	3300005181	Soil	MIKVKQLSYALLLGGIAITAAYSQDTATEYVAPPDAGPKGKAPRMKVQLLNPGEPTKQ
Ga0066671_109211501	3300005184	Soil	MIKMKLLSYGLSFIAMAVTTAYSQDTAIEYVTPSEPVPKGTAPRMKVQLVNNGGERGKHY
Ga0065704_102687581	3300005289	Switchgrass Rhizosphere	MIKVKQLSYALLLGGIAIAAAYSQDTATEYAAPPDAGPKGKAPRMKVQPLNPGEPTKQYAVIF
Ga0065715_110251132	3300005293	Miscanthus Rhizosphere	MIKVKQLSYALLLGGIAITAAYSQDTASEYVAPPDAGPKGKAPKM
Ga0065705_107352051	3300005294	Switchgrass Rhizosphere	MIKVKQLSYALLLGGIAITAAYSQDTAIEYVAPPDAGPKGKAPRMKVELLNPGEPTKQYAVIFYEG
Ga0070676_106014292	3300005328	Miscanthus Rhizosphere	MIKVKQLSYALLLGGIAITAAYSQDTASEYVTPPDAGPKGKA
Ga0070671_1005837671	3300005355	Switchgrass Rhizosphere	MINLKQLTYSLLLGGFAMATGYSQDTAEYVAPPDAGPKGKAPRMKVQLLN
Ga0070671_1015000242	3300005355	Switchgrass Rhizosphere	MSTQLKEKNAMTKIKQLSCALSLVGIAITTAYSQDTASEYVAPPDAGPKGKAPRMKVELLNPGERTKQY
Ga0066689_105536022	3300005447	Soil	MEKKSMIKVKQLSYALLLGGIAIATAYSQNKDSEYVAPPDAGPKGKAPRMKVQ
Ga0066682_104483652	3300005450	Soil	MIKVKQLSYALLLGGIAIATAYSQNKDSEYVAPPDAGPKGKAPRMKVQ
Ga0070707_1009686231	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MIKIKQLSYALLLGGIAITAAYSQDIPTEYVAPPDAGPKGKA
Ga0066697_103578352	3300005540	Soil	MIKVKQLSYALLLGGIAIATAYSQNKDSEYVAPPDAGPKGKAP
Ga0066700_102123791	3300005559	Soil	LIKVKQFGYALLLLGFAITKGYSQDTATEYVAPSEAVPRGKAPRMKVQLLNLGESTKQYAVIFYQ
Ga0066700_103516552	3300005559	Soil	MINMKKLNYALLLGGMAIATAYSQNKDSEYVAPPDAGPKGKAPRM
Ga0066670_104732223	3300005560	Soil	VIKVKQLSYALSLVGIAFTTGYSQDTASEYVAPSEAVPKGEAPRMKVQLLN
Ga0066694_101498231	3300005574	Soil	MKKLTYALLIGGIAIATAYSQNKDSEYVAPPDAGPKGKAPRMKVQL
Ga0066708_107997861	3300005576	Soil	MIKLNQLSHALLLVGAAVTTGYSQDTANEYVAPRDA
Ga0066691_104153832	3300005586	Soil	MIKLKQLSHALLLVGAAVTTGYSQDTANEYVAPRD
Ga0066691_105222882	3300005586	Soil	MTKVRHLSYALLLAGIAATAAQSQDTATEYVAPPDAGPKGKAPRMKVQLLNPGE
Ga0070717_120973081	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MIKVKQLSYALLLGGIAITAAYSQDSASEYVAPPDAGPKGKAP
Ga0066652_1003698652	3300006046	Soil	LNLTLEKNSMIKVKQLSYALLLGGIAITAAYSQDTESEYVAPPDAGPK
Ga0066652_1009094812	3300006046	Soil	VTKLKQLSYAVLLGGLSIATAHSQSAASEYVAPPDAGPKGK
Ga0070712_1004035352	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MSKVKQLSYALLLGGIAITAAYSQDTASEYVAPPDAGPKGKAP
Ga0066665_101050684	3300006796	Soil	MIKIKQLSYALLFGGMAITTGYSQDAASEYVAPPDAGPKGKAPRMKVQLL
Ga0066665_113541052	3300006796	Soil	LIKVKQFGYALLLLGFAITKGYSQDSATEYVAPPDAGPKGKAPRMKVQL
Ga0066660_105639653	3300006800	Soil	MITVKQLTYALLLGGIATATAYSQDTAREYVAPRDAGPKGKAPRMKVQLLNPGEPTKQYAVIFYQGDE
Ga0066660_111647862	3300006800	Soil	MISVKQLSYALLLGGIAIATAYSQDKDTEYVAPPDAGPKGTAPRM
Ga0099791_100486003	3300007255	Vadose Zone Soil	MIKIKQLSCALLLVGVAITTAYSQDTASEYVAPPDAGPKG
Ga0099791_102147691	3300007255	Vadose Zone Soil	MINMKKLNYALLLGGIAIATAYSQNKDSEYVAPPDAGPKGKAPRMKVQLLNPGD
Ga0099793_103288753	3300007258	Vadose Zone Soil	MIKVKQFSYPLLLGGIAIMAAYSQDTASEYVAPPDAGPKGKAPRMKVQ
Ga0099793_106351011	3300007258	Vadose Zone Soil	MIKVKQLSYALLLGGIAITAAYSQDTATEYVAPPDAGPKGKAPRMKVQLLNPGEPTKQSDVDI*
Ga0066710_1004359063	3300009012	Grasslands Soil	LNITLEKNSMIKVKQLSYALLLGGIAITAAYSQDTVTEYVAPPDAGPKGKAPRMKVQLLTPGESTKQ
Ga0066710_1046409302	3300009012	Grasslands Soil	MIKVKQFSYPLLLGGIAIMAAYSQDTASEYVAPPDAGPKGKA
Ga0099829_107329021	3300009038	Vadose Zone Soil	MITVKQLTYALLLGGIATATTYSQHTTSEYVAPPDAGPKGKASRMKVQLLNPGEP
Ga0066709_1044988531	3300009137	Grasslands Soil	MIKIKQLSYALLLGGIAITAAYSQDTATEYVAPPDA
Ga0099792_109237141	3300009143	Vadose Zone Soil	MINLKQLTYSLLLGGFAMATGYSQDTVEYVAPPDAGPKGKAPRMKVQLLN
Ga0105249_104792053	3300009553	Switchgrass Rhizosphere	MINLKQLTYSLLLGGFAMATGYSQDTATEYVAPPDAGPKGKAPRMKVQLLNDGEPMKQY
Ga0134065_104693332	3300010326	Grasslands Soil	MIKVKQLSYALLLGGIAITAAYSQDTASEYVAPPDAGPKGKAPKIKVQLLNPGAPTKQ
Ga0134125_112368421	3300010371	Terrestrial Soil	MIKVKQLSYALLLGGIAITAAYSQYTATEYVAPPDAGPKGKAPRMKVQLL
Ga0134128_105459433	3300010373	Terrestrial Soil	MINLKQLTYSLLLGGFAMATGYSQDTATEYVAPPDAGPKGKAPRMKVQLLNDGEPMKQYA
Ga0134122_114859641	3300010400	Terrestrial Soil	MIKVKQLSYALLLGGIAITAVYSQDAASEYVAPPDAG
Ga0137392_110900091	3300011269	Vadose Zone Soil	MITLKQLTYALLLGGIASATAYSQDTANEYVAPPDAGPKGK
Ga0137364_102443101	3300012198	Vadose Zone Soil	MIKVKQLSYALLLGGIAIATAYSQNKDSEYVAPPDAGPKGK
Ga0137364_102559863	3300012198	Vadose Zone Soil	MITIKQLTYALLLGGIATAAAYSQDTANEYVAPPDAGPKGKAPRMKVQLLNSGEPTKQYAVIFYQ
Ga0137382_103927151	3300012200	Vadose Zone Soil	MITLKQLTYALLLGGIASATAYSQDTANEYVAPPDAGPKGKAPRMKVQL
Ga0137382_104479903	3300012200	Vadose Zone Soil	MITVKQLTYALLLGGIATATAYSQDTANEYIAPPDAGPKGKAPRMKVQLLNPGEPTKQYAVIF*
Ga0137365_100967584	3300012201	Vadose Zone Soil	MIKIKQLSHALLLGGIAITTVYSQDTATEYVAPPDAGPKGKLPG*
Ga0137363_102095292	3300012202	Vadose Zone Soil	MIKVKQFSYPLLLGGIAIMAAYSQDTASEYVAPPDTGPKGKAPRMKVQLLNPGEKTKQL*
Ga0137399_109612432	3300012203	Vadose Zone Soil	MIKVKQLSYALLLGGIAITAAYSQDTASEYVAPPDAGPKGKAPRMKVQ
Ga0137399_110764881	3300012203	Vadose Zone Soil	MIKVKQLSYALLLGGIAITAAYSQDTASEYVAPPDAGPKGKA
Ga0137362_102361443	3300012205	Vadose Zone Soil	MIKVKQLSYALLLGGIAIATAHSQNKDSEYVAPPDAGPKGKAPRMKVQLLNPGE
Ga0137362_104849253	3300012205	Vadose Zone Soil	MIKVKQLSYALLLGGIAITAAYSRDTATEYVALPDAGPKGKAPKMKVQLLNPGEPTKQYAVIFYQGDEALS
Ga0137362_104896433	3300012205	Vadose Zone Soil	MITLKQLTYALLLGGIASATAYSQDTANEYVAPPDAGPKGKAPRMKVQLLNPGEPTKQYAVIFYQ
Ga0137362_110792362	3300012205	Vadose Zone Soil	MKKLPSALVIGGIAIATAYSQNKDSEYVAPPDAGPKGKA
Ga0137381_115298751	3300012207	Vadose Zone Soil	MINIKQFSYALLLVGFAATAGHAQETTSEYVAPPDAGPKGKAPRMKVQL
Ga0137376_102715873	3300012208	Vadose Zone Soil	MITVKQLTYALLLGGIATATAYSQDTANEYIAPPDAGPKGKAPRMKVQLLNDKEPTK
Ga0137376_115432972	3300012208	Vadose Zone Soil	MIKIKQLSHALLLGGIAITTVYSQDAASEYVAPPDTGPKGKAPTMKVQLLNPGEPTKQ
Ga0137376_117791532	3300012208	Vadose Zone Soil	LNLTLEKNFMIKAKQLSYALLLGGIAITAAYSQDTASEYVAPPDAGPKGKAPKMKVQLLN
Ga0137378_101148532	3300012210	Vadose Zone Soil	MVTENSMIKIKQLSHALLLGGIAITTVYSQDTATEYVAPPDAGPKGKLPG*
Ga0137370_109470601	3300012285	Vadose Zone Soil	MINLKQLTYSLLLGGFAMATGYSQDTAEYVAPPDAGPKGKAPRMKVQLLNHGEPTKQYAV
Ga0137358_105715851	3300012582	Vadose Zone Soil	MIIKIKQLSYALLFGGMAITTGYSQDAASEYVAPPDAGPKGKAPRMKVQ
Ga0137395_110934692	3300012917	Vadose Zone Soil	MIKVKQFSYPLLLGGIAIMAAYSQDTASEYVAPPDTGPKGKAPRMKVQ
Ga0137396_113174582	3300012918	Vadose Zone Soil	MIKVKQFSYPLLLGGIAIMAAYSQDTASEYVAPPDTGPKGKAPRMKV
Ga0137394_110073132	3300012922	Vadose Zone Soil	MIKVKQLSYALLLGGIAITAAYSQDTATEYIAPPDAGPKGKAPRMKVQLLNPGEPTK
Ga0137413_101779471	3300012924	Vadose Zone Soil	MEKKSMIKIKQLSYALLLGGIAIATAYSRNKDSEY
Ga0137413_104361991	3300012924	Vadose Zone Soil	MIKVKQLSYALLLGGIAIATAHSQNKDSEYVAPPDAGPK
Ga0137413_105812711	3300012924	Vadose Zone Soil	LIKVKQFGYALLLLGFAITKGYSQDPATEYVAPSEAVPRGKAPRMKVQLLNLG
Ga0137419_113553641	3300012925	Vadose Zone Soil	MIKVKQLSYALLLGGIAITAAYSQDTASEYVAPPDAGPKGKAPKIKVQLLNP
Ga0137404_112213501	3300012929	Vadose Zone Soil	MIKVELLSCALLLVGFVTTTGHSQETTSEYVAPPDTGPKGKAPKMHVQLLNDE
Ga0137407_107854103	3300012930	Vadose Zone Soil	MIKVKDLSYALLLGGIAITAAYSQDTASEYVAPPDAGPKGKAPRM
Ga0164303_109614462	3300012957	Soil	MIKLKQLSYALLLGGIAITAAYSQDTTTEYVAPPDAGPKGKAPKM
Ga0164303_114185502	3300012957	Soil	MIKVKQLSYALLLGGIAITAAYSQETATEYVEPPDAGPKGKAPRMKVQLLNPGETTKQYAVIFYQG
Ga0164301_114715991	3300012960	Soil	MIKVKQLSYALLVGWIAITAAYSQDTASEYVAPPDAGPKGKAPKMKVQ
Ga0164301_115834862	3300012960	Soil	MIKVKQLSYALLLGGIAITAAYSQETATEYVAPPDAGPKGKAPRMKVQLLNPGETT
Ga0164302_101563752	3300012961	Soil	MIKVKQLSYALLLGGIAITAAYSQETATEYVAPPDAGPKGKAPKRKVQLLNPGEAT
Ga0164302_115720551	3300012961	Soil	LIKVKQFGYALLLLGFAITKGYSQDSATEYVAPPDAGPKGKAPRMKVQLLN
Ga0164304_111441811	3300012986	Soil	MINLKQLTYSLLLGGFAMATGYSQETAEYVAPPDAGPK
Ga0157376_129009751	3300014969	Miscanthus Rhizosphere	MIKVKQLSYALLLGGIAITAAYSQDTATEYVAPPDTGPKGKAPRMKVQLLNPGE
Ga0137409_114924111	3300015245	Vadose Zone Soil	MEKKSMIKVKQLSYALLLGGIAIATACSRNKDSEYVAPPDAG
Ga0137403_110296502	3300015264	Vadose Zone Soil	MTNIKQLGYALLMGGIAMTRGYSQDTASEYVAPPDAGPKGKA
Ga0134085_104369511	3300015359	Grasslands Soil	MIKVKQLSYALLLGEIAITAAYSQDTASDYVAPPDAGPKGKAPRMKVQLLNPGEPTKQYAVIFYQ
Ga0132256_1038541752	3300015372	Arabidopsis Rhizosphere	MIKVKQLSYALLLGGIAITAAYSQDSASEYVAPPDAGQK
Ga0184618_102015721	3300018071	Groundwater Sediment	LNLTLEKNSMIKVKQLSYALLLGGIAITAAYSQDTAMEYVAPPDASPKG
Ga0184618_102997812	3300018071	Groundwater Sediment	MIKVKQLSYALLLGGIAITAAYSQDTAMEYVAPPDASPKG
Ga0066655_103148282	3300018431	Grasslands Soil	MFLLKQLSYALVLVGLVVPRGGSQDTASEYVAPPDAGPKGTAPRMKVQLLNLEKG
Ga0066667_112586452	3300018433	Grasslands Soil	MTTLKRLSYALLLGGIASATAYSQDTASEYVAPPDAGPKGKAPRMKVQLLNPGE
Ga0193744_10266641	3300019874	Soil	MMNLKQLTYSLLVGVFAMATGYSQDSATEYVAPPDAGPKGNAPRMKV
Ga0193707_10426711	3300019881	Soil	MINLKKLTYSLLLGGFAMATGYSQDTAEYVAPPDAGPKGKAPRMKVQSLN
Ga0193713_11716581	3300019882	Soil	MMNLKRLTYSLLVGGFAMATGYSQGSATEYVAPPDAGPKGNAPRMKVRLLNDGEPTKQYSVIF
Ga0193713_12052001	3300019882	Soil	MIALKQLTYALLLGGIATATAYSQDTASEYVAPPDAGPKGKAPRMKVELLNP
Ga0193718_10399442	3300019999	Soil	LNLTLEKNSMIKVKQLSYALLLGGIAITAAYSQDTATDYVAPPDAG
Ga0193755_12065551	3300020004	Soil	MIKVKQLSYALLLGGIAITAAYSQDSATEYVAPPDAGPK
Ga0193749_10396701	3300020010	Soil	MITLKQLTYALLLGGIASATAYSQDTANEYVAPPDAGPKGKAPRMKVQLLNPGEPTKQ
Ga0179594_100360671	3300020170	Vadose Zone Soil	MIKVKQFSYPLLLGGIAIMAAYSQDTASEYVAPPDTGPKGKAPRMKVQLLNPGEKTKQL
Ga0210407_110410113	3300020579	Soil	MINLKQLTYSLLLGGFAMATGYSQDTAEYVAPPDAGPKGKAPRMKVQLLSDGEPTKQY
Ga0193709_10143591	3300021411	Soil	MIKVKQLSYALLLGGIAITAAYSQDSATEYVAPPDAGPKGKAPRMK
Ga0193709_10947231	3300021411	Soil	MMNLKQLTYSLLVGVFAMATGYSQDSATEYVAPPDAGPKGNAPRMKVRLLNDGEPTKQYSVI
Ga0193750_10085296	3300021413	Soil	MIAVKQLTYALLLGGIAAATAYSQDTASEYVAPPDAGPTGKAPRMKVQ
Ga0193750_10912512	3300021413	Soil	MIKVKLLGYALSLVGVAVATTYSQDTTSEYVAPPDAGPKGKAPRMKVQLL
Ga0210392_100528233	3300021475	Soil	LNLTLEKNSMMKVKQLSYALLLGGMAITAAYSQGTASEYVAPPDAGPKGKAPKMKVQLLNPGAPTKQY
Ga0222622_100915621	3300022756	Groundwater Sediment	MINLKQLTYSLLLGGFAMATGYSQDTAEYVAPPDAGPKGKAPRMKVQLLNDGEPTKQYAVIFYQE
Ga0222622_105197191	3300022756	Groundwater Sediment	LNLTLEKNSMIKVKQLSYALLLGGIAITAAYSQDTATEYVAPPDAGPKGKAPRMKVQLLNPGESTKQYAVIFYQGDE
Ga0179589_103070252	3300024288	Vadose Zone Soil	MIKLKQISYAVLLSGLALTRGYSQDAGYVAPPDAGPKGNAPRMKVQLLNPGDPTKQYAV
Ga0179589_105979561	3300024288	Vadose Zone Soil	VIKIKQLSYALLLVGIAITTAYSQDTASEYVAPSDAGPKGKAPRMKIQLLNP
Ga0207657_102702961	3300025919	Corn Rhizosphere	MIKVKQLSYALLLGGIAITAAYSQDTASEYVTPPDAGPKGKAPKIKVQLLNPGAPTKQYAVIFYE
Ga0207646_109124083	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MIKAKRLSCALLLSGMAIATGHSQDTEYVAPPDAGPKGKAPRMKVQLLNEGAPTKQ
Ga0207700_117066851	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MINLKQLTYSLLLGGFAMATGYSQDTAEYVAPPDAGPKGKAPRMKVQLLNDGEPTKQYAV
Ga0207706_101589034	3300025933	Corn Rhizosphere	MINLKQLTYSLLLGGFAMATGYSQDTATEYVAPPDAGPKGKAPRMKVQLLNDGEP
Ga0207704_104797652	3300025938	Miscanthus Rhizosphere	LNLTLEKNSMIKVKQLSYALLLGGIAITAAYSQDTASEYVAPPDA
Ga0207704_119762583	3300025938	Miscanthus Rhizosphere	MINLKQLTYSLLLGGFAMATGYSQDTATEYVAPPDA
Ga0209238_11811782	3300026301	Grasslands Soil	MIKIKQLSYTLLLGGIAITTVYSQHTATEYVAPPDAGPKGKAPRM
Ga0209470_11831401	3300026324	Soil	LNLILEKNSMIKVKQLSYALLLVGIAITAAFSQDTATEYVAPPDADPKGKAPRMKVQLLNPGEPTKQYAVIFY
Ga0209267_10573331	3300026331	Soil	MITVKQLTYALLLGGIATATAYSQDTANEYVAPPDAGPKGKAPRMKVQ
Ga0209806_10317621	3300026529	Soil	LIKVKQFGYALLLLGFAITKGYSQDTATEYVAPSEAVPRGKAPRMKVQL
Ga0209805_13412711	3300026542	Soil	MIKIKQLSCALLLVGIAITTAYSQDTASEYVAPPDAGPKGKAPRMKVQLL
Ga0209805_13777852	3300026542	Soil	MIKIKQLSYALLLGGIAITAAYSQDTATEYVAPPDAGPKGKAPRMQVQLLNPGEKTKQL
Ga0209161_102010011	3300026548	Soil	LIKVKQFGYALLLLGFAITKGYSQDSATEYVAPPDAGPKGKAPRMKVQLLNDGEPTK
Ga0179587_106024772	3300026557	Vadose Zone Soil	MIKVKQFSYPLLLGGIAIMAAYSADTASEYVAPPDTGPKGKAPRMKVQLLNPGEKTKQL
Ga0207603_1026301	3300026820	Soil	LNLTLEKNSMIKVKQLSYALLLGGIAITAAYSQDSASEYVAPP
Ga0209329_10172121	3300027605	Forest Soil	MIALKQLTYALLLGGIASATAYSQDTANEYVAPSDAGPKGKAPRMKVQLLNPGEPTKQYAVIF
Ga0209076_11195222	3300027643	Vadose Zone Soil	MITLKQLTYALLLGGIASATAYSQDTANEYVAPPDAGPKGKAPKMKVQLLNPGEPTKQYAVI
Ga0209328_101437742	3300027727	Forest Soil	MIKLKQLSYALVSVGIAAITTGYSQDTASEYVAPSEA
Ga0209488_104765712	3300027903	Vadose Zone Soil	LNLTLEKNSMIKVKQLSYALLLGGIAITAAYSQDTASEYVAPPDAGPKGKAPK
Ga0209488_105582081	3300027903	Vadose Zone Soil	MITLKQLTYALLLGGIASATAYSQDTANEYVAPPDAGPKGKAPRMKVQLLNPGEPTKQY
Ga0268264_123412392	3300028381	Switchgrass Rhizosphere	LNLTLEKNSMIKAKQLSYALLLGGIAITAAYSQDTATQYVAPPDAGPK
Ga0307305_104897421	3300028807	Soil	MIKVKQLSYALLLGGIAITAAYSQDTATEYVAPPDAGPK
Ga0075374_107384702	3300030855	Soil	MIKIKQFSYAVLFGGIAIAAAYSQDTASDYVAPPDAGPKGKAPRMKVQLLNPGEPTKQY
Ga0170834_1027829851	3300031057	Forest Soil	MINVKQLSYALLLGGIAITAAYSQDTATEYVAPPDAGPKGKAPRMKVQLLNPGEPTKQYAVIFYQ
Ga0170834_1065360841	3300031057	Forest Soil	MTKIKQLGCALSLVGIAITTAYSQDTASEYVAPPEAGPKGKAPRMKVELLN
Ga0170824_1212008473	3300031231	Forest Soil	MIKVMRLSCALLLSGMAIATGHSQDTEYVAPPDAGPKGKAPRMKVQLLNEGTPT
Ga0170824_1288744581	3300031231	Forest Soil	MIKVKQLSYALLLGGIAITAAYSQDTAAEYVAPPDAGPKGKAPRMKVQLLNPGEPTKQYA
Ga0170820_141917672	3300031446	Forest Soil	MIKVKQLSYALLLGGIAITAAYSQDTAAEYVAPPDAGPKGKAPRMKVQLLNPGEPTKQYAVIFYQGDE
Ga0170819_157498354	3300031469	Forest Soil	MIKIKQFSYAVLFGGIAITAAYSQDTASDYVAPPDAGPKGKAPRMKVQLLNPGEPT
Ga0307477_102486583	3300031753	Hardwood Forest Soil	MLKVKRLSCALLLSGMAIATGHSQDTEYVAPPDAGPKGKAPRMKVQLLNQG
Ga0307475_106541433	3300031754	Hardwood Forest Soil	MIALKQLTYALLLGGIATTAAYSQDTASEYVAPPDAGPKGKAPR
Ga0307475_107265141	3300031754	Hardwood Forest Soil	MIKAKRLGCALLLSGMAIATGHSQDTEYVAPPDAGPIGKAPRMKVQLLNEGALTKQYAV
Ga0307473_111736381	3300031820	Hardwood Forest Soil	LIKVKQFGYALLLLGFAITKGYSQESATEYVAPPDAGPKGKAPRMKVRLLNDG
Ga0307471_1001325291	3300032180	Hardwood Forest Soil	MIALKQLTYALLLGGIATTAAYSQDTASEYVAPPDAGPKGK
Ga0307471_1009036051	3300032180	Hardwood Forest Soil	MTALKQLTYALLLGGITTATGYSQDTASEYVAPPDAGPKGKAPR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F049813

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences