Metagenome Family F049843

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F049843
Family Type	Metagenome
Number of Sequences	146
Average Sequence Length	63 residues
Representative Sequence	MIESAKLDRLLTQVNCRITSIARLRDAGAISERKAEQQLKQAVEFRAELMRQIGGQNFVFDA
Number of Associated Samples	102
Number of Associated Scaffolds	146

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	42.47 %
% of genes near scaffold ends (potentially truncated)	28.77 %
% of genes from short scaffolds (< 2000 bps)	91.78 %
Associated GOLD sequencing projects	96
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.69

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Unclassified (58.219 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (13.014 % of family members)
Environment Ontology (ENVO)	Unclassified (26.712 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (47.260 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 57.78% β-sheet: 0.00% Coil/Unstructured: 42.22%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.69
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.69
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 146 Family Scaffolds
PF00873	ACR_tran	2.74
PF07681	DoxX	2.05
PF00487	FA_desaturase	2.05
PF06078	DUF937	1.37
PF09351	DUF1993	1.37
PF13561	adh_short_C2	0.68
PF13432	TPR_16	0.68
PF01145	Band_7	0.68
PF05239	PRC	0.68
PF00793	DAHP_synth_1	0.68
PF04430	DUF498	0.68
PF13180	PDZ_2	0.68
PF00027	cNMP_binding	0.68
PF03729	DUF308	0.68
PF00011	HSP20	0.68
PF09361	Phasin_2	0.68
PF13692	Glyco_trans_1_4	0.68
PF00498	FHA	0.68
PF02518	HATPase_c	0.68
PF12838	Fer4_7	0.68
PF12697	Abhydrolase_6	0.68
PF04366	Ysc84	0.68
PF07311	Dodecin	0.68
PF02739	5_3_exonuc_N	0.68
PF03734	YkuD	0.68

COG ID	Name	Functional Category	% Frequency in 146 Family Scaffolds
COG1398	Fatty-acid desaturase	Lipid transport and metabolism [I]	2.05
COG2259	Uncharacterized membrane protein YphA, DoxX/SURF4 family	Function unknown [S]	2.05
COG3239	Fatty acid desaturase	Lipid transport and metabolism [I]	2.05
COG4270	Uncharacterized membrane protein	Function unknown [S]	2.05
COG3753	Uncharacterized conserved protein YidB, DUF937 family	Function unknown [S]	1.37
COG0071	Small heat shock protein IbpA, HSP20 family	Posttranslational modification, protein turnover, chaperones [O]	0.68
COG0258	5'-3' exonuclease Xni/ExoIX (flap endonuclease)	Replication, recombination and repair [L]	0.68
COG1376	Lipoprotein-anchoring transpeptidase ErfK/SrfK	Cell wall/membrane/envelope biogenesis [M]	0.68
COG1504	Uncharacterized conserved protein, DUF498 domain	Function unknown [S]	0.68
COG2930	Lipid-binding SYLF domain, Ysc84/FYVE family	Lipid transport and metabolism [I]	0.68
COG3034	Murein L,D-transpeptidase YafK	Cell wall/membrane/envelope biogenesis [M]	0.68
COG3247	Acid resistance membrane protein HdeD, DUF308 family	General function prediction only [R]	0.68
COG3360	Flavin-binding protein dodecin	General function prediction only [R]	0.68
COG3737	Uncharacterized protein, contains Mth938-like domain	Function unknown [S]	0.68

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.22 %
All Organisms	root	All Organisms	41.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.22 %
cellular organisms	root	All Organisms → cellular organisms	41.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.22 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	41.10 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.22 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	30.82 %
Opisthokonta	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta	0.68 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.22 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	26.71 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.68 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.68 %
Opisthokonta	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.22 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	21.23 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.68 %
Caulobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales	0.68 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.68 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	0.68 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.68 %
Opisthokonta	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.22 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	10.96 %
unclassified Hyphomicrobiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales	5.48 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.68 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	0.68 %
Caulobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae	0.68 %
Rhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	0.68 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.68 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.68 %
Opisthokonta	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.22 %
Methyloceanibacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter	6.85 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	5.48 %
unclassified Hyphomicrobiaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae	3.42 %
Telmatospirillum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Telmatospirillum	0.68 %
Rhizobium/Agrobacterium group	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group	0.68 %
Brevundimonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Brevundimonas	0.68 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.68 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.68 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.68 %
Opisthokonta	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.22 %
Methyloceanibacter methanicus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter methanicus	6.16 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	5.48 %
Hyphomicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	3.42 %
unclassified Brevundimonas	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Brevundimonas → unclassified Brevundimonas	0.68 %
Methyloceanibacter superfactus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter superfactus	0.68 %
Rhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium	0.68 %
unclassified Telmatospirillum	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Telmatospirillum → unclassified Telmatospirillum	0.68 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.68 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.68 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.68 %
Opisthokonta	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.22 %
Methyloceanibacter methanicus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter methanicus	6.16 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	5.48 %
Hyphomicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	3.42 %
Brevundimonas sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Brevundimonas → unclassified Brevundimonas → Brevundimonas sp.	0.68 %
Telmatospirillum sp. J64-1	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Telmatospirillum → unclassified Telmatospirillum → Telmatospirillum sp. J64-1	0.68 %
Rhizobium leguminosarum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → Rhizobium leguminosarum	0.68 %
Methyloceanibacter superfactus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter superfactus	0.68 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.68 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.68 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.68 %
Opisthokonta	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta	0.68 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2067725003\|GPWSG_F5G3JLY01CCTCV	Not Available	506	Open in IMG/M
2228664022\|INPgaii200_c1065394	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Telmatospirillum → unclassified Telmatospirillum → Telmatospirillum sp. J64-1	1900	Open in IMG/M
3300000597\|AF_2010_repII_A1DRAFT_10112291	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter methanicus	668	Open in IMG/M
3300000890\|JGI11643J12802_11702524	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1923	Open in IMG/M
3300000891\|JGI10214J12806_10353726	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	5154	Open in IMG/M
3300000891\|JGI10214J12806_12221686	Not Available	513	Open in IMG/M
3300001431\|F14TB_101431974	Not Available	507	Open in IMG/M
3300004463\|Ga0063356_101138215	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → Rhizobium leguminosarum	1128	Open in IMG/M
3300004463\|Ga0063356_102330684	Not Available	817	Open in IMG/M
3300004463\|Ga0063356_105651927	Not Available	536	Open in IMG/M
3300004463\|Ga0063356_106216894	Not Available	512	Open in IMG/M
3300004479\|Ga0062595_100198635	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter methanicus	1238	Open in IMG/M
3300004479\|Ga0062595_100501129	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	912	Open in IMG/M
3300004479\|Ga0062595_100867627	Not Available	755	Open in IMG/M
3300004479\|Ga0062595_101238210	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	666	Open in IMG/M
3300004643\|Ga0062591_100356560	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	1185	Open in IMG/M
3300005169\|Ga0066810_10002650	All Organisms → cellular organisms → Bacteria	2086	Open in IMG/M
3300005169\|Ga0066810_10082186	Not Available	686	Open in IMG/M
3300005185\|Ga0066811_1013346	Not Available	636	Open in IMG/M
3300005330\|Ga0070690_100183138	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	1448	Open in IMG/M
3300005332\|Ga0066388_100488076	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1869	Open in IMG/M
3300005332\|Ga0066388_103628944	Not Available	788	Open in IMG/M
3300005332\|Ga0066388_104480298	Not Available	711	Open in IMG/M
3300005332\|Ga0066388_106719311	Not Available	579	Open in IMG/M
3300005341\|Ga0070691_10377349	Not Available	794	Open in IMG/M
3300005347\|Ga0070668_100200518	All Organisms → cellular organisms → Bacteria → Proteobacteria	1638	Open in IMG/M
3300005347\|Ga0070668_101496093	Not Available	617	Open in IMG/M
3300005347\|Ga0070668_102199376	Not Available	510	Open in IMG/M
3300005440\|Ga0070705_101022392	Not Available	672	Open in IMG/M
3300005441\|Ga0070700_101312509	Not Available	608	Open in IMG/M
3300005545\|Ga0070695_100112097	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1853	Open in IMG/M
3300005713\|Ga0066905_100222726	Not Available	1428	Open in IMG/M
3300005713\|Ga0066905_101122118	All Organisms → cellular organisms → Bacteria	699	Open in IMG/M
3300005764\|Ga0066903_103263929	All Organisms → cellular organisms → Bacteria	877	Open in IMG/M
3300005842\|Ga0068858_100476697	Not Available	1204	Open in IMG/M
3300006174\|Ga0075014_100102270	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1338	Open in IMG/M
3300006354\|Ga0075021_10231401	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1134	Open in IMG/M
3300006852\|Ga0075433_10106705	Not Available	2483	Open in IMG/M
3300006854\|Ga0075425_100697823	Not Available	1166	Open in IMG/M
3300006854\|Ga0075425_100882883	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1023	Open in IMG/M
3300006904\|Ga0075424_100247312	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter methanicus	1896	Open in IMG/M
3300006904\|Ga0075424_102745175	Not Available	514	Open in IMG/M
3300009094\|Ga0111539_10338155	All Organisms → cellular organisms → Bacteria	1752	Open in IMG/M
3300009098\|Ga0105245_12170851	Not Available	609	Open in IMG/M
3300009146\|Ga0105091_10406821	Not Available	679	Open in IMG/M
3300009147\|Ga0114129_11445737	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	847	Open in IMG/M
3300009147\|Ga0114129_12710549	Not Available	590	Open in IMG/M
3300009156\|Ga0111538_10096513	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	3758	Open in IMG/M
3300009162\|Ga0075423_12419247	Not Available	573	Open in IMG/M
3300009174\|Ga0105241_12552763	Not Available	512	Open in IMG/M
3300009176\|Ga0105242_10490258	Not Available	1167	Open in IMG/M
3300009551\|Ga0105238_11516684	Not Available	699	Open in IMG/M
3300009811\|Ga0105084_1096395	Not Available	556	Open in IMG/M
3300010046\|Ga0126384_10151073	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter methanicus	1788	Open in IMG/M
3300010362\|Ga0126377_10202081	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1906	Open in IMG/M
3300010371\|Ga0134125_11374829	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	770	Open in IMG/M
3300010375\|Ga0105239_10120750	Not Available	2910	Open in IMG/M
3300010375\|Ga0105239_10530307	Not Available	1340	Open in IMG/M
3300010398\|Ga0126383_10058098	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	3262	Open in IMG/M
3300010398\|Ga0126383_10403936	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter methanicus	1404	Open in IMG/M
3300010401\|Ga0134121_10597597	Not Available	1032	Open in IMG/M
3300010403\|Ga0134123_11158086	Not Available	801	Open in IMG/M
3300012913\|Ga0157298_10120196	All Organisms → cellular organisms → Bacteria	743	Open in IMG/M
3300012941\|Ga0162652_100055167	Not Available	654	Open in IMG/M
3300012941\|Ga0162652_100104662	Not Available	510	Open in IMG/M
3300012948\|Ga0126375_10022119	Not Available	2988	Open in IMG/M
3300012948\|Ga0126375_10159836	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter methanicus	1432	Open in IMG/M
3300012955\|Ga0164298_10568264	Not Available	772	Open in IMG/M
3300012955\|Ga0164298_11243117	Not Available	567	Open in IMG/M
3300012957\|Ga0164303_10609178	Not Available	720	Open in IMG/M
3300012957\|Ga0164303_10857698	Not Available	631	Open in IMG/M
3300012958\|Ga0164299_11034934	Not Available	608	Open in IMG/M
3300012960\|Ga0164301_11047760	Not Available	645	Open in IMG/M
3300012961\|Ga0164302_10790996	Not Available	715	Open in IMG/M
3300012961\|Ga0164302_10885868	Not Available	683	Open in IMG/M
3300012961\|Ga0164302_10967037	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	660	Open in IMG/M
3300012964\|Ga0153916_12039631	All Organisms → cellular organisms → Bacteria	643	Open in IMG/M
3300012984\|Ga0164309_10214743	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1333	Open in IMG/M
3300012986\|Ga0164304_11635364	Not Available	537	Open in IMG/M
3300012987\|Ga0164307_10566359	Not Available	870	Open in IMG/M
3300012989\|Ga0164305_11851641	Not Available	546	Open in IMG/M
3300013296\|Ga0157374_11756519	Not Available	645	Open in IMG/M
3300013306\|Ga0163162_10843382	Not Available	1032	Open in IMG/M
3300013306\|Ga0163162_10978937	Not Available	956	Open in IMG/M
3300013307\|Ga0157372_10371559	Not Available	1666	Open in IMG/M
3300014968\|Ga0157379_12625038	Not Available	505	Open in IMG/M
3300015371\|Ga0132258_10472885	All Organisms → cellular organisms → Bacteria → Proteobacteria	3129	Open in IMG/M
3300015371\|Ga0132258_10937486	All Organisms → cellular organisms → Bacteria → Proteobacteria	2187	Open in IMG/M
3300015371\|Ga0132258_11182105	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter methanicus	1934	Open in IMG/M
3300015371\|Ga0132258_12115290	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1414	Open in IMG/M
3300015371\|Ga0132258_12283589	Not Available	1357	Open in IMG/M
3300015371\|Ga0132258_12868350	All Organisms → cellular organisms → Bacteria	1199	Open in IMG/M
3300015372\|Ga0132256_100026786	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	5174	Open in IMG/M
3300015372\|Ga0132256_100287589	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter superfactus	1724	Open in IMG/M
3300015372\|Ga0132256_103813450	Not Available	507	Open in IMG/M
3300015373\|Ga0132257_100015491	All Organisms → cellular organisms → Bacteria → Proteobacteria	7863	Open in IMG/M
3300015373\|Ga0132257_101138932	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	986	Open in IMG/M
3300015373\|Ga0132257_101316484	Not Available	917	Open in IMG/M
3300015373\|Ga0132257_103080566	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter methanicus	607	Open in IMG/M
3300015374\|Ga0132255_100825871	Not Available	1382	Open in IMG/M
3300015374\|Ga0132255_101232614	Not Available	1127	Open in IMG/M
3300015374\|Ga0132255_102305021	All Organisms → cellular organisms → Bacteria → Proteobacteria	821	Open in IMG/M
3300015374\|Ga0132255_103894697	Not Available	634	Open in IMG/M
3300017792\|Ga0163161_10534064	Not Available	959	Open in IMG/M
3300017792\|Ga0163161_11201188	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	656	Open in IMG/M
3300017792\|Ga0163161_11977739	All Organisms → cellular organisms → Bacteria	519	Open in IMG/M
3300018028\|Ga0184608_10099892	Not Available	1211	Open in IMG/M
3300018054\|Ga0184621_10012036	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	2525	Open in IMG/M
3300018076\|Ga0184609_10511278	Not Available	546	Open in IMG/M
3300019361\|Ga0173482_10386563	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	646	Open in IMG/M
3300019362\|Ga0173479_10309463	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	724	Open in IMG/M
3300021168\|Ga0210406_10184115	All Organisms → cellular organisms → Bacteria	1739	Open in IMG/M
3300025914\|Ga0207671_11092633	Not Available	627	Open in IMG/M
3300025916\|Ga0207663_10419723	Not Available	1027	Open in IMG/M
3300025917\|Ga0207660_11595692	Not Available	526	Open in IMG/M
3300025918\|Ga0207662_11320952	Not Available	512	Open in IMG/M
3300025933\|Ga0207706_10343172	All Organisms → cellular organisms → Eukaryota → Opisthokonta	1299	Open in IMG/M
3300025934\|Ga0207686_10378440	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Brevundimonas → unclassified Brevundimonas → Brevundimonas sp.	1073	Open in IMG/M
3300025935\|Ga0207709_10805992	Not Available	758	Open in IMG/M
3300025972\|Ga0207668_12008177	Not Available	521	Open in IMG/M
3300026075\|Ga0207708_12044061	Not Available	502	Open in IMG/M
3300026118\|Ga0207675_102316341	Not Available	551	Open in IMG/M
3300026121\|Ga0207683_10379881	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1299	Open in IMG/M
3300027252\|Ga0209973_1016599	Not Available	940	Open in IMG/M
3300027462\|Ga0210000_1033786	All Organisms → cellular organisms → Bacteria	804	Open in IMG/M
3300027523\|Ga0208890_1005293	Not Available	1545	Open in IMG/M
3300027577\|Ga0209874_1036974	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1315	Open in IMG/M
3300027907\|Ga0207428_11119919	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter methanicus	550	Open in IMG/M
3300028381\|Ga0268264_10949965	Not Available	865	Open in IMG/M
3300028592\|Ga0247822_10855440	Not Available	744	Open in IMG/M
3300028809\|Ga0247824_10387719	Not Available	804	Open in IMG/M
3300028828\|Ga0307312_10335937	All Organisms → cellular organisms → Bacteria	987	Open in IMG/M
3300031226\|Ga0307497_10079519	Not Available	1230	Open in IMG/M
3300031474\|Ga0170818_114354526	All Organisms → cellular organisms → Bacteria	714	Open in IMG/M
3300031716\|Ga0310813_10344327	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1269	Open in IMG/M
3300031720\|Ga0307469_10793966	All Organisms → cellular organisms → Bacteria	868	Open in IMG/M
3300031740\|Ga0307468_100156603	Not Available	1473	Open in IMG/M
3300031740\|Ga0307468_100566612	Not Available	919	Open in IMG/M
3300032075\|Ga0310890_10533942	All Organisms → cellular organisms → Bacteria	898	Open in IMG/M
3300032174\|Ga0307470_10627228	Not Available	808	Open in IMG/M
3300032174\|Ga0307470_11596344	Not Available	546	Open in IMG/M
3300032174\|Ga0307470_11624140	Not Available	542	Open in IMG/M
3300032180\|Ga0307471_100299122	Not Available	1695	Open in IMG/M
3300032205\|Ga0307472_101613633	Not Available	638	Open in IMG/M
3300033416\|Ga0316622_102402569	Not Available	609	Open in IMG/M
3300033551\|Ga0247830_10742786	Not Available	780	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	58.90%
Host-Associated	Host-Associated	41.10%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	54.11%
Plants	Host-Associated → Plants	41.10%
Aquatic	Environmental → Aquatic	4.79%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	52.74%
Rhizosphere	Host-Associated → Plants → Rhizosphere	21.23%
Rhizoplane	Host-Associated → Plants → Rhizoplane	19.86%
Sediment	Environmental → Aquatic → Sediment	3.42%
Freshwater	Environmental → Aquatic → Freshwater	1.37%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	1.37%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	39.04%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	15.75%
Loam	Environmental → Terrestrial → Soil → Loam	11.64%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	9.59%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	9.59%
Soil	Host-Associated → Plants → Rhizosphere → Soil	5.48%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.42%
Sand	Environmental → Terrestrial → Soil → Sand	1.37%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	1.37%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.68%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.68%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.68%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.68%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	21.92%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	15.75%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	9.59%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	9.59%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	7.53%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.16%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	5.48%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	4.79%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.42%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.42%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.42%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	2.74%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	1.37%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	1.37%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.68%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.68%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.68%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.68%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.68%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	13.01%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	9.59%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	7.53%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	5.48%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	4.79%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	4.11%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.11%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	4.11%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	3.42%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.42%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	3.42%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	3.42%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.74%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	2.74%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.74%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	2.74%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	2.05%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.05%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.05%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	2.05%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.37%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.37%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.37%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	1.37%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	1.37%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	0.68%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	0.68%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.68%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.68%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.68%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.68%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.68%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.68%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.68%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.68%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.68%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2067725003	Soil microbial communities from Great Prairies - Wisconsin, Switchgrass soil	Environmental	Open in IMG/M
2228664022	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000597	Forest soil microbial communities from Amazon forest - 2010 replicate II A1	Environmental	Open in IMG/M
3300000890	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000891	Soil microbial communities from Great Prairies - Wisconsin, Continuous corn soil	Environmental	Open in IMG/M
3300001431	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.4TB clc assemly	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005169	Soil and rhizosphere microbial communities from Laval, Canada - mgHPA	Environmental	Open in IMG/M
3300005185	Soil and rhizosphere microbial communities from Laval, Canada - mgHPB	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005341	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG	Environmental	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300006174	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014	Environmental	Open in IMG/M
3300006354	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012	Environmental	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009146	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 10-12cm March2015	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300009811	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_20_30	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300012913	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S043-104R-2	Environmental	Open in IMG/M
3300012941	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t4i015	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012964	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 4 metaG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018054	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1	Environmental	Open in IMG/M
3300018076	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coex	Environmental	Open in IMG/M
3300019361	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)	Environmental	Open in IMG/M
3300019362	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1 (version 2)	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300025914	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025918	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300027252	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant Co S PM (SPAdes)	Host-Associated	Open in IMG/M
3300027462	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant Co PM (SPAdes)	Host-Associated	Open in IMG/M
3300027523	Soil and rhizosphere microbial communities from Laval, Canada - mgHPA (SPAdes)	Environmental	Open in IMG/M
3300027577	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_20_30 (SPAdes)	Environmental	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028592	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Cellulose_Day30	Environmental	Open in IMG/M
3300028809	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_PalmiticAcid_Day48	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300031226	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_S	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300032075	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300033416	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_OW2_C1_D5_C	Environmental	Open in IMG/M
3300033551	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day5	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GPWSG_02846780	2067725003	Soil	MIETAKLDRLLTQVNCRITSIVRLRDAGAISKFKAEQELNEAVEFRAQLMRQIDGQNFAFDA
INPgaii200_10653941	2228664022	Soil	IESAKLDRLLTQVNCRITSIARLRHAGAISNRKAEQELKQAVKFRVELMRQVDGQNFVFD
AF_2010_repII_A1DRAFT_101122913	3300000597	Forest Soil	RLLTQANCRITSIVSLRDAGAITARKAKQELKQAVEVRAELMRQIDGQSFAFDA*
JGI11643J12802_117025242	3300000890	Soil	MRETAELDRLLTQVNCRITSIVRLRDAGAISEREAEQELKQGVAVRAELMRRIDGQEF
JGI10214J12806_103537264	3300000891	Soil	MRETAELARLLTQVNCRITSIVRLRDAGAISEREAEQELKQGVAVRAELMRRIDGQEFAFDA*
JGI10214J12806_122216861	3300000891	Soil	MIENARLDRLLTQVNCRIASIARLRDAEAISTRKAEQELKHAVAFRAELMRQGALAVLC*
F14TB_1014319741	3300001431	Soil	MIESAKLDRLLTRVNCRITSIARLRHAGXXSRKAEQELKQAVEFCAELMRQIDGQNFVFDA*
Ga0063356_1011382151	3300004463	Arabidopsis Thaliana Rhizosphere	NCATSHPLMIDSAKLDRLLTEVNCRITSIARLRHVGAISERKAERQLKQAVEFRAELMRQIDGQNSVFDA*
Ga0063356_1023306842	3300004463	Arabidopsis Thaliana Rhizosphere	MRETSEPERLLTQVNCRITSIVRRRDAGAISKCEAERELKEDIAVRTVLMQQIDSQDFAFDA*
Ga0063356_1056519271	3300004463	Arabidopsis Thaliana Rhizosphere	MRETELDRLLTQVTCRITSIIRLRDAAAISERKAEQELKRAVSFRAELMRQIDDQDLTFDA*
Ga0063356_1062168941	3300004463	Arabidopsis Thaliana Rhizosphere	MIENARLDRLLTQVNCRITSIARLRDAGAISNRKAEKELKQAVELRAKFMRQIDRQNFA
Ga0062595_1001986352	3300004479	Soil	MIETAKLDRLLTQVNCRITSIVRLRDAGAITLRKAKQELKQAVEFRAELMRQIDGQNFAFDA*
Ga0062595_1005011292	3300004479	Soil	MIESAKLDRLLTQVNCRITSIARLRHAGAISNRKAEQELKQAVKFRVELMRQVDGQNFVFDA*
Ga0062595_1008676273	3300004479	Soil	MRETAELDRLLTQVNCRIASIVRLRDAGAISEREAEQELKQGVAVRAELMRRIDGQEFAFDA*
Ga0062595_1012382101	3300004479	Soil	MIDSAKLDRLLTEVNCRITSIARLRHVGAISERKAERQLKQAVEFRAELMRQIDGQNSVFDA*
Ga0062591_1003565603	3300004643	Soil	MIDSAKLDRLLAEVNCRITSIARLRHVGAISERKAERQLKQAVEFRAELMRQIDGQNSVFDA*
Ga0066810_100026502	3300005169	Soil	MIENARLDLLLTQVNCRITSITRLRDAGAISNSKAEKQLKQKIELRTKFMRQIDRENFAFDA*
Ga0066810_100821861	3300005169	Soil	MRETAEIDRLLTQVNCRIASIARLRDAGAISEREAEQELTRGVAVRAELMRQIDNQEFAFDA*
Ga0066811_10133461	3300005185	Soil	MRETAELDRLLTQVNCRITSIVRLRDAGAISEREAEQELTRGVAVRAELMRQIDNQEFAFDA*
Ga0070690_1001831383	3300005330	Switchgrass Rhizosphere	MIDSAKLDRLLTEVNCRITSIARLRHVGAISERKAERQLKQAVEFRAELMRQIDGQISVFDA*
Ga0066388_1004880763	3300005332	Tropical Forest Soil	VSHDAMDVHVSADEAAKLERLLTQVNCRITSIVRLRDAGAISEREAEQELKQGVAYRAELMRQIDGQEFAFDA*
Ga0066388_1036289442	3300005332	Tropical Forest Soil	MTESAKLDGLLTQVNCRVTSIARLREAGAIPECKAELELKQAIELRAELMRQVDGQNFAFDG*
Ga0066388_1044802982	3300005332	Tropical Forest Soil	MTETTELERLLTQVSCRITSSIRRRDAGAISEREAEREIRQGLAVRAELMRQIDTQEPVFDA*
Ga0066388_1067193111	3300005332	Tropical Forest Soil	MIKTAKLDRLLTQANCRITSIVRLRDAGAITVREAKQELKQAVEVRAELMRQIDGQTRLSPPRDC*
Ga0070691_103773491	3300005341	Corn, Switchgrass And Miscanthus Rhizosphere	TSCGYPLMIESVELDRLVTQVTCRITNVARLRQEGTISERNADQQLKQAFEYRAELIRQIDSQNFVFDA*
Ga0070668_1002005181	3300005347	Switchgrass Rhizosphere	MTSHVIESAKVDRLLTQVDCRITSLARRRDAGTISECKAEELKQAIELRAELMRQIDRQNSAFDA*
Ga0070668_1014960932	3300005347	Switchgrass Rhizosphere	MIENAMLDRLLTQVNCRITSIARLREAAAISERKAAQELKQAKAFRTELMRQIDGQGFAFDA*
Ga0070668_1021993761	3300005347	Switchgrass Rhizosphere	MIESVELDRLVTQVTCRITNVARLRKAGAISERNAEQQLKQAVEYRAELMRQIDSQNLVVDA*
Ga0070705_1010223921	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	KVDRLLTQVDCRITSLARRRDAGTISECKAEELKQAIELRAELMRQIDRQNAAFDA*
Ga0070700_1013125092	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	PPSNCATSHPLMIDSAKLDRLLTEVNCRITSIARLRHVGAISERKAERQLKQAAEFRAELIRQIDAQNSVFDA*
Ga0070695_1001120976	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	MIESVELDRLVTQVTCRITNVARLRQEGTISERNADQQLKQAFEYRAELI
Ga0066905_1002227262	3300005713	Tropical Forest Soil	MTESAKLDRLLTQVNCRITSIARLREAGAIPECKAELELKQAIELRAELMRQVDGQNFAFDG*
Ga0066905_1011221182	3300005713	Tropical Forest Soil	MDVHVSADEAAKLERLLTQVNCRITSIVRLRDAGAISEREAEQELKQGVAYRAELMRQIDGQEFDA*
Ga0066903_1032639292	3300005764	Tropical Forest Soil	MIATAKLDRLLTQANCRITSIVRLRDAGAIIGRKAKQEFKQAVEVRAELMRQIDGQ
Ga0068858_1004766972	3300005842	Switchgrass Rhizosphere	MIESAELDRLLTQVTCRITNVARLRKAGAISERNAEQQLKQAVEYRAELMRQIDRQDLVVDA*
Ga0075014_1001022701	3300006174	Watersheds	MIESAKLDRLLTQVNCHITSIARLREAGAISECKAQQDLKQAVEFRAKLMRQIDGQNFAFDA*
Ga0075021_102314011	3300006354	Watersheds	CASYPLMIESAKLDRLLTQVNCHITSIARLREAGAISECKAQQDLKQAVEFRAKLMRQIDGQNFAFDA*
Ga0075433_101067054	3300006852	Populus Rhizosphere	MIETAKLDRLLTQVNCRITSIVRLRDAGAISKFKAEQELNEAVEFRAELMRQIDGQNFAFDA*
Ga0075425_1006978233	3300006854	Populus Rhizosphere	MIETAKLDRLLTQVNCRITSIVRLRDAGAISKPKAEQELKEAVEFRAQLMRQIDGQNFAFDA*
Ga0075425_1008828831	3300006854	Populus Rhizosphere	MIETAKLDRLLTQVNCRITSIVRLRDAGAISKFKAEQELKEAVEFRAELMRQIDDQNFAFDA*
Ga0075424_1002473122	3300006904	Populus Rhizosphere	MIETAKLDRLLTQVNCRITSIVRLRDAGAITLRKAKQELKQAVEFRAELMWQIDGQNFAFDA*
Ga0075424_1027451752	3300006904	Populus Rhizosphere	LDRLLTQVNCRITSIARLRDAGAISNRKAEQELKQAVELRAKFMRQIDRQNFAFDA*
Ga0111539_103381551	3300009094	Populus Rhizosphere	MIETAKLDRLLTQVDCRITSIVRLRDAGAISKRKAEQELKEAVEFRAELMRQIDGQNFAFDA*
Ga0105245_121708511	3300009098	Miscanthus Rhizosphere	MIQSAELDRQLTRVSCRITNVARLRQEGTISERNADQQLKQAFEYRAELI
Ga0105091_104068211	3300009146	Freshwater Sediment	MLDSTKLDRLLTRVNCRITSIARLRDAGAISERHAEQKLKQAVEFRAELMRQIDAQNFVFDA*
Ga0114129_114457371	3300009147	Populus Rhizosphere	MRETAELDRLLTQVNCRIASIVRLRDAGAISEREAEQELKQGVAVRAELMRRIDGQ
Ga0114129_127105491	3300009147	Populus Rhizosphere	MVENAKLDRLLTQVNCRITSIARLRDAGAISNRKAEQELKQAVELRAKFMRQIDRQNFAFDA*
Ga0111538_100965133	3300009156	Populus Rhizosphere	MIETAKLDRLLTQVNCRITSIVRLRDAGAITLRKANQELKQAVEFRAELMWQIDGQNFAFDA*
Ga0075423_124192471	3300009162	Populus Rhizosphere	LTQVNCRITSIARLRDAGAISERKAEQKLKQAVELRAKLMRQIDRQNFAFDA*
Ga0105241_125527632	3300009174	Corn Rhizosphere	MVENVKLDRLLTQVNCRIASIARLRDAEAISTRKAEQELKHAVAFRAELMR
Ga0105242_104902582	3300009176	Miscanthus Rhizosphere	MIESVELDRLVTQVTCRITNVARLRQEGTISERNADQQLKQAFEYRAELIRQIDSQNFVFDA*
Ga0105238_115166842	3300009551	Corn Rhizosphere	MIDSAKLDRLLTEVNCRITSIARLRHVGAISERKAERQLKQAVEFRAELMRQI
Ga0105084_10963952	3300009811	Groundwater Sand	MIESAKLDRLLTQVNCRITSIARLKDTGAISERKAELELKQAVEFRAELMRQIGGQNFVFDA*
Ga0126384_101510732	3300010046	Tropical Forest Soil	MIETAKLDRLLTQANCRITSIVSLRDAGAITALKAKRELKQAVEVRAELMRQIDGQSFAFDA*
Ga0126377_102020813	3300010362	Tropical Forest Soil	MDVHVSADEAAKLERLLTQVNCRITSIVRLRDAGAISEREAEQELKQGVAYRAELMRQIDGQEFAFDA*
Ga0134125_113748293	3300010371	Terrestrial Soil	ELDRRLTQVNCRITNVARLRRIGAISERDAEHQLKQAVAFRANLMRLVGRQNLIFDA*
Ga0105239_101207505	3300010375	Corn Rhizosphere	MIENAKLDRLLTQVNCRITSIARLRDAGAISNRKAEQELKQAVELRAKFMRQIDRLLPLTPRT*
Ga0105239_105303071	3300010375	Corn Rhizosphere	KLDRLLTEVNCRITSIARLRHVGAISERKAERQLKQAVEFRAELMRQIDGQNSVFDA*
Ga0126383_100580986	3300010398	Tropical Forest Soil	MTETTELEWLLTQVSCRITSSIRRRDAGAISEREAEREIRQGLAVRAELMRQIDTQEPVFDA*
Ga0126383_104039361	3300010398	Tropical Forest Soil	KTAKQLCTSYPLMIETAKLDRLLTQANCRITNIVSLRDAGAITARKAKQELKQAVEVRAELMRQIDGQSFAFDA*
Ga0134121_105975973	3300010401	Terrestrial Soil	MIESAELDRLLTQVTCRITNVARLRKAGAISERNAEQQLKQAVEYRAELMRQIDSQNLVVDA*
Ga0134123_111580862	3300010403	Terrestrial Soil	CGYPLMIESVELDRLVTQVTCRITNVARLRQEGTISERNADQQLKQAFEYRAELIRQIDSQNFVFDA*
Ga0157298_101201962	3300012913	Soil	QVNCRITSIVRLRDAGAISKFKAEQELNEAVEFRAELMRQIDGQNFAFDA*
Ga0162652_1000551672	3300012941	Soil	MIENARLDLLLTQVNCRITSITRLRDAGAISNSKAEKQLKQKVELRTKFRRQIDRENFAFDA*
Ga0162652_1001046621	3300012941	Soil	AMSRALMVENAKLDRLLTQVNCRITSITRLRDVGAISERKAEQELQQALEFRTKLMRRIDRQVFAFDA*
Ga0126375_100221192	3300012948	Tropical Forest Soil	MTESAKLDRLLTQVNCRITSIARLREAGAIPECKAELELKQAIELCEELMRQVDGQNFAFDG*
Ga0126375_101598362	3300012948	Tropical Forest Soil	VLLAIVSHDAMDVHVSADEAAKLDRLLTQVNCRITSIVRLRDAGAISEREAEQELKQGVAYRAELMRQIDGQEFDA*
Ga0164298_105682642	3300012955	Soil	MIESAELDRLLTQVSCRITNVARLRKAGAISERNAEQQLKQAVEYRAELMRQIDSQNLVVDA*
Ga0164298_112431171	3300012955	Soil	MRETAELDRLLTQVSCRITSIMRLRDAGAISEREAERELKQGVVVRAELMRQIDGQEVAFDA*
Ga0164303_106091782	3300012957	Soil	MIESAELDRLLTQVSCRITNVARLRKAGAISERNAEQQLKQAVEYRAELMRQIDSQYLVVDA*
Ga0164303_108576982	3300012957	Soil	MIENAKLDRLLTQVNCRITSIARLRDAGAISERKAEQELKQAVELRAKFMRQIDRQNFAFDA*
Ga0164299_110349341	3300012958	Soil	MIESAELDRLLTQVSCRITNEARLRKAGAISERNAKQQLKQAVEYRAALMRQIDSQNFVFDA*
Ga0164301_110477601	3300012960	Soil	CTKSPSKCATSCALITENAKLDRLLTQVNCRIARIARLRDAEAISTRKAEQKLRKAVELRTKLIRQIDRQNDAFDA*
Ga0164302_107909961	3300012961	Soil	MIENAKLDRLLTQVNCRITSIARLRDAGAISNRKAEQELKQAVELRAKFMRQIDRQNFAFDA*
Ga0164302_108858682	3300012961	Soil	MIERAKLDRLLTQVSCRITNVARLRKAGAISERNAEQQLKQAVEYRAELMRQIDSQYLVVDA*
Ga0164302_109670372	3300012961	Soil	MIESAKLDRLLTQVNCRIASIARLRDAGEISEQKAEQELKQAVEFRTQFMRQIDAQNFAFDA*
Ga0153916_120396311	3300012964	Freshwater Wetlands	MRETAELDRLLTQVNCRITSIIRRRGAGAISEREAEQEFKQGVAVRAELKRQIDGQEFAFDA*
Ga0164309_102147435	3300012984	Soil	MIESSELDRRLTQVNCRITNVARLRRIGAISERDAEHQLKQAVAFRANLMRLVGRQNLIFDA*
Ga0164304_116353642	3300012986	Soil	MIENARLDRLLTQVNCRITSIARLRDAGAISERKAEQELKQAVELRAKFMRQIDRQNFAFDA*
Ga0164307_105663591	3300012987	Soil	MIESVELDRLVTQVTCRITNVARLRKAGAISERNAEQQLKQAVEYRAALMRKIDSQNFSFDA*
Ga0164305_118516412	3300012989	Soil	VDATSCALMIENARLDRLLTQVNCRITSIARLRDAGAISERKAEQELKQAVELRAKFMRQIDRQNFAFDA*
Ga0157374_117565191	3300013296	Miscanthus Rhizosphere	SSSCGYPLMIESAELDRLLTQVTCRITNVARLRKAGAISERNAEQQLKQAVEYRAELMRQIDRQDLVVDA*
Ga0163162_108433821	3300013306	Switchgrass Rhizosphere	MIENAKLDRLLTQVNCHITSIARLRDAGAISNRKAEQELKQAVELRAKFMRQIDRQNFAFDA*
Ga0163162_109789372	3300013306	Switchgrass Rhizosphere	YPLMRETAELDRLLTQVNCRITSIVRLRDAGAISECEAEQKLKQGVAVRAELMRQIDGQEVAFDA*
Ga0157372_103715594	3300013307	Corn Rhizosphere	MIESVELDRLVTQVTCRNTNVARLRKAGAISERNAEQQLKQAVEYRAELMRQIDSQNLVVDA*
Ga0157379_126250381	3300014968	Switchgrass Rhizosphere	AGSSCGYPLMIESVELDRLVTQVTCRITARLRQEGTISERNADQQLKQAFEYRAELIRQIDSQNFVFDA*
Ga0132258_104728852	3300015371	Arabidopsis Rhizosphere	MTEPRLERLLTQVNCRIVGIARLIQVRAITERNAKQQLKRAVEYRAELMRQIDRQNLIFDA*
Ga0132258_109374863	3300015371	Arabidopsis Rhizosphere	MIESAELDRLLTQVTCRITYVARLRKAGAISERNAEQQLKHAVEYRAELMRQIDSQNLVVDA*
Ga0132258_111821052	3300015371	Arabidopsis Rhizosphere	MIETAKLDRLLTQANCRITSIVSPRDAGAITARKAKQELKQLVEVRAELMRQIDGQSFAFDAQNTAYPNARLSN*
Ga0132258_121152903	3300015371	Arabidopsis Rhizosphere	MIESAELDRLLTQVSCRITNVARLRQAGAISERNAEQQLKQAVEYRAELMRQIDDQEFAFDT*
Ga0132258_122835893	3300015371	Arabidopsis Rhizosphere	MRETAELERLLTQVSCPITSIIRRRDAGAISECEAEQELKQAGEFRAQLIRQIDAQNFAFDA*
Ga0132258_128683503	3300015371	Arabidopsis Rhizosphere	MREIAELERLLTQVSCRITSIIRRRDAGAISEREAEQELKQGVAVRAELMRQIDGQEPAFDA*
Ga0132256_1000267863	3300015372	Arabidopsis Rhizosphere	MQVSCRITSIIRLRDAGAISGREAEQELEQGVAVRAELMRQIDGQEFAFDA*
Ga0132256_1002875893	3300015372	Arabidopsis Rhizosphere	MIESAELDRLITQVTCRITYVARLRKAGAISERNAEQQLKQAVEYRAELMRQIDSQNLVVDA*
Ga0132256_1038134501	3300015372	Arabidopsis Rhizosphere	MIHSAKFDRLLTQVICRITSVARLGDAGAISERRAKRELTQAVEFRAELMRQIDGQDCVFDA*
Ga0132257_1000154913	3300015373	Arabidopsis Rhizosphere	MIENAKLDRLLTQVNCRITSIARLRDAGAISNRKAVQELNQAVELRAKFMRQIDRLLPLTPRT*
Ga0132257_1011389322	3300015373	Arabidopsis Rhizosphere	MRETAELDRLLTQVSCRITSIIRLRDAGAISGREAEQELEQGVAVRAELMRQIDGQEFAFDA*
Ga0132257_1013164842	3300015373	Arabidopsis Rhizosphere	MREIAELERLLTQVSRRITSIIRRRDAGAISECEAEQELKRGVAVRAELMRQIDGQEFAFDA*
Ga0132257_1030805661	3300015373	Arabidopsis Rhizosphere	MIETAKLDRLLTQANCRITSIVSPRDAGAITARKAKQELKQLVEVRAELMRQIDGQSFDAQNTAYPNARLSN*
Ga0132255_1008258712	3300015374	Arabidopsis Rhizosphere	MRETAELERLLTQVSCRITRIIRRRDAGAISECEAEQEPKQAGEFRAQLIRQIDAQNFAFDA*
Ga0132255_1012326142	3300015374	Arabidopsis Rhizosphere	MQVSCRITSIIRLKDAGAISGREAEQELEQGVAVRAELMRQIEGQEFAFDA*
Ga0132255_1023050211	3300015374	Arabidopsis Rhizosphere	GHKTAGSPCGYPQMIESAELARLLTQVSCRILNVARLRRVGAISERNAERQLQQAVECRAELMRQIDSQNFVFDA*
Ga0132255_1038946972	3300015374	Arabidopsis Rhizosphere	MKESAELDRLLTQVICRATNVARLRQAGAISKRNAEQQLQQAVEYRAELMRQIDSQSPVFDA*
Ga0163161_105340641	3300017792	Switchgrass Rhizosphere	MIESVELDRLVTQVTCRITNVARLRKAERFQNNAEQQLKQAVECRAELVRQIDSQNFVFD
Ga0163161_112011881	3300017792	Switchgrass Rhizosphere	TKPPSNCATTYPLMIDSAKLDRLLTEVNCRITSIARLRHVGAISERKAERQLKQAAEFRAELIRQIDGQNSVFDA
Ga0163161_119777391	3300017792	Switchgrass Rhizosphere	LDRLLTQVSCRITSIIRLRDAGAISEHEAERELKQGVAVRAELMRQIDGQEVAFDA
Ga0184608_100998922	3300018028	Groundwater Sediment	MRETAELDRLLTQVNCRITTIARLRNAGAVSERKAEQELRKAVEFRAQLMRKIDAQNFAFDA
Ga0184621_100120365	3300018054	Groundwater Sediment	MIENAKLDRLLTQVNCRITSIARLTDAGAISERKAEQELKEAVEFRAKLMRQIDGQNF
Ga0184609_105112781	3300018076	Groundwater Sediment	LPSHDRESKARPLLTQVNCRITSIARLRDARAISERKAEEELKHAVEFRAKLMRQIDGQNFAFDA
Ga0173482_103865632	3300019361	Soil	MIETAKLDRLLTQVNCRITSIVRLRDAGAISKRKAEQELKEAVEFRAELMRQIDGQNFAFDA
Ga0173479_103094631	3300019362	Soil	MIDSAKLDRLLAEVNCRITSIARLRHVGAISERKAERQLKQAVEFRAELMRQIDGQNSVFDA
Ga0210406_101841153	3300021168	Soil	MIENARLDRLLTQVNCRITSIARLRDAGAISERKAEQELKQAVELRAKFMRQIDRQNFAFDA
Ga0207671_110926331	3300025914	Corn Rhizosphere	MIDSAKLDRLLTEVNCRITSIARLRHVGAISERKAERQLKQAVEFRAELMRQIDGQNSVFDA
Ga0207663_104197233	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MIESVELDRLVTQVTCRITARLRQEGTISERNADQQLKQAFEYRAELIRQIDSQNFVFDA
Ga0207660_115956922	3300025917	Corn Rhizosphere	MIDSAKLDRLLTEVNCRITSIARLRHVGAISERKAERQLKQAVEFRAELMRQIDGQNSVF
Ga0207662_113209522	3300025918	Switchgrass Rhizosphere	MIDSAKLDRLLTEVNCRITSIARLRHVGAISERKAERQLKQAAEFRAELIRQIDGQNSVFDA
Ga0207706_103431721	3300025933	Corn Rhizosphere	MIESVELDRLVTQVTCRITNVARLRKAGAISERNADQQLKQAFEYRAELIRQIDSQNFVFDA
Ga0207686_103784402	3300025934	Miscanthus Rhizosphere	TYTKPPSNCATSHPLMIDSAKLDRLLTEVNCRITSIARLRHVGAISERKAERQLKQAVEFRAELMRQIDGQNSVFDA
Ga0207709_108059923	3300025935	Miscanthus Rhizosphere	MIESAELDRLLTQVSCRITNVARLKQTGAISERNVEQQLKQAVEYRAELMRQIDSQNLVVDA
Ga0207668_120081772	3300025972	Switchgrass Rhizosphere	TSQLIMTSHVIESAKVDRLLTQVDCRITSLARRRDAGTISECKAEELKQAIELRAELMRQIDRQNSAFDA
Ga0207708_120440611	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	MDQTQFRQVSVQRLAMIESADVDRLLTQVNCRITSIARLGHAGAISDCKAEQELKKAVEFRAELMRQIDSQKFAFDA
Ga0207675_1023163411	3300026118	Switchgrass Rhizosphere	MIESAKLDRLLTQVNCRIASIARLRDAGEISEQKAEQELKQAVEFRVQFMRQIDAQNFAFDA
Ga0207683_103798814	3300026121	Miscanthus Rhizosphere	TNTKPPSNCATTYPLMIDSAKLDRLLTEVNCRITSIARLRHVGAISERKAERQLKQAAEFRAELIRQIDGQNSVFDA
Ga0209973_10165991	3300027252	Arabidopsis Thaliana Rhizosphere	MIQTAKLDRLLTQVNCRITSIVRLRDAGAISKFKAEQELNEAVEFRAELMRQIDGQNFAFDA
Ga0210000_10337862	3300027462	Arabidopsis Thaliana Rhizosphere	MIETAKLDRLLTQVNCRITSIVRLRDAGAISKPKAEQELKEAVEFRAQLMRQIDGQNFAFDA
Ga0208890_10052931	3300027523	Soil	MRETAELDRLLTQVNCRITSIVRLRDAGAISEREAEQELTRGVAVRAELMRQIDNQEFAFDA
Ga0209874_10369742	3300027577	Groundwater Sand	MIESAKLDRLLTQVNCRITSIARLRDAGAISERKAEQQLKQAVEFRAELMRQIGGQNFVFDA
Ga0207428_111199191	3300027907	Populus Rhizosphere	DRLLTQVNCRITSIVRLRDAGAITLRKAKQELKQAVEFRAELMRQIDGQNFAFDA
Ga0268264_109499652	3300028381	Switchgrass Rhizosphere	GYPLMIESAELDRLLTQVTCRITNVARLRKAGAISERNAEQQLKQAVEYRAELMRQIDRQDLVVDA
Ga0247822_108554401	3300028592	Soil	MIENAMLDRLLTQVNCRITSIARLREAAAISERKAAQEPKQAKAFRAELMRQIDGQGFAFDA
Ga0247824_103877191	3300028809	Soil	MSETAELDRLLTQVSCRITSIIRLRDAGAISEREAERELKQGVAVRAQLMRQIDGQEVAFDA
Ga0307312_103359372	3300028828	Soil	MIESAELDRLLTQVNCRITSIARLRDARAISERKAEEELKHAVEFRAKLMRQIDGQNFAFDA
Ga0307497_100795192	3300031226	Soil	MIENAKLDRLLTQVNCRITSIACLRDAGAISERKAEQELKQAVELRAKFMRQIDRQNFAFDA
Ga0170818_1143545262	3300031474	Forest Soil	NTKPPSNRATSYPLMIESAKLDRLLTQVSCRIMSIIRRRDAGAISGREAEQELKQDVAVRAELMRQIDGQEVAFDA
Ga0310813_103443273	3300031716	Soil	MIESAKLDRLLTQVNCRITSIARLRHAGAISNRKAEQELKQAVKFRVELMRQVDGQNFVFDA
Ga0307469_107939662	3300031720	Hardwood Forest Soil	MRETAELDRLLTQVNCRITTIAHLRNAGAVSERKAEQELRKAVEFRAQLMWKIDAQNFAFDA
Ga0307468_1001566032	3300031740	Hardwood Forest Soil	MIENARLDLLLTQVNCRITSITRLRNAGAISNSKAEKQLKQKVELRTKFMRQIDRENFAFDA
Ga0307468_1005666123	3300031740	Hardwood Forest Soil	MRETAELDRLLTQVNCRITSIIRRRDAGAISNRKAEQELKHAVEFRAKLMRQIDGQNFAFDA
Ga0310890_105339422	3300032075	Soil	LTGLLTQVNCRITSIARLRDAGAISESEAEQELKQGIAFRAELMRQIDGQDFAFDA
Ga0307470_106272282	3300032174	Hardwood Forest Soil	MIESAELDRLLTQVSCRITNVARLRQAGAISERNAEQQLKQAVEYRAELMRQIDDQEFAFDT
Ga0307470_115963442	3300032174	Hardwood Forest Soil	MIESAELDRQLTRVSCRITNVARLRKAERFQNNAEQQLKQAVECRAELVRQIDSQNFVFD
Ga0307470_116241402	3300032174	Hardwood Forest Soil	AELDRLLTQVNCRITGIARLRDAGAISERKAEQELKPAVEFRAKLMRQIDGQNFAFDA
Ga0307471_1002991222	3300032180	Hardwood Forest Soil	MIENARLDLLLTQVNCRITSITRLRDAGAISNSKAEKQLKQKVELRTKFMRQIDRENFAFDA
Ga0307472_1016136331	3300032205	Hardwood Forest Soil	MIESARLDRLLTQVNCRIASIARLRDAGEISEQKAEQELKQAVEFRVQFMRQIDAQNFAFDA
Ga0316622_1024025691	3300033416	Soil	MVENAKLDRLLTQVNCRITSIARLREAGAISNRKAEQELKQAVELRAKFMGQIDRQNFAFDA
Ga0247830_107427862	3300033551	Soil	MIENAMLDRLLTQVNCRITSIARLREAAAISERKAAQELKQAKAFRAELMRQIDGQGFAFDA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F049843

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences