Metagenome / Metatranscriptome Family F049858

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F049858
Family Type	Metagenome / Metatranscriptome
Number of Sequences	146
Average Sequence Length	65 residues
Representative Sequence	LNGAEAATVLKNDLPETPVILFTYTDLHADSLCSAIGVDFISKVDGIPKLLERVDALLPPALPNEGATLW
Number of Associated Samples	92
Number of Associated Scaffolds	146

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	13.70 %
% of genes near scaffold ends (potentially truncated)	80.82 %
% of genes from short scaffolds (< 2000 bps)	84.25 %
Associated GOLD sequencing projects	79
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.56

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Unclassified (50.000 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (47.260 % of family members)
Environment Ontology (ENVO)	Unclassified (50.685 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (69.178 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 30.61% β-sheet: 6.12% Coil/Unstructured: 63.27%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.56
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.56
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 146 Family Scaffolds
PF00072	Response_reg	17.12
PF12158	DUF3592	1.37
PF13338	AbiEi_4	0.68
PF05016	ParE_toxin	0.68
PF01609	DDE_Tnp_1	0.68
PF07238	PilZ	0.68
PF13840	ACT_7	0.68
PF00589	Phage_integrase	0.68
PF01408	GFO_IDH_MocA	0.68
PF01904	DUF72	0.68
PF02321	OEP	0.68
PF04679	DNA_ligase_A_C	0.68
PF14082	DUF4263	0.68
PF07690	MFS_1	0.68
PF01274	Malate_synthase	0.68
PF13231	PMT_2	0.68
PF04014	MazE_antitoxin	0.68
PF08530	PepX_C	0.68
PF01068	DNA_ligase_A_M	0.68
PF02577	BFN_dom	0.68
PF01370	Epimerase	0.68
PF00311	PEPcase	0.68

COG ID	Name	Functional Category	% Frequency in 146 Family Scaffolds
COG1538	Outer membrane protein TolC	Cell wall/membrane/envelope biogenesis [M]	1.37
COG1793	ATP-dependent DNA ligase	Replication, recombination and repair [L]	1.37
COG1259	Bifunctional DNase/RNase	General function prediction only [R]	0.68
COG1423	ATP-dependent RNA circularization protein, DNA/RNA ligase (PAB1020) family	Replication, recombination and repair [L]	0.68
COG1801	Sugar isomerase-related protein YecE, UPF0759/DUF72 family	General function prediction only [R]	0.68
COG2225	Malate synthase	Energy production and conversion [C]	0.68
COG2352	Phosphoenolpyruvate carboxylase	Energy production and conversion [C]	0.68
COG2936	Predicted acyl esterase	General function prediction only [R]	0.68
COG3039	Transposase and inactivated derivatives, IS5 family	Mobilome: prophages, transposons [X]	0.68
COG3293	Transposase	Mobilome: prophages, transposons [X]	0.68
COG3385	IS4 transposase InsG	Mobilome: prophages, transposons [X]	0.68
COG5421	Transposase	Mobilome: prophages, transposons [X]	0.68
COG5433	Predicted transposase YbfD/YdcC associated with H repeats	Mobilome: prophages, transposons [X]	0.68
COG5659	SRSO17 transposase	Mobilome: prophages, transposons [X]	0.68

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	50.00 %
Unclassified	root	N/A	50.00 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.00 %
cellular organisms	root	All Organisms → cellular organisms	49.32 %
Viruses	superkingdom	All Organisms → Viruses	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.00 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	49.32 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.00 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	37.67 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.37 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.00 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	28.77 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	2.05 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.68 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.68 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.00 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	28.77 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	1.37 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	0.68 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	0.68 %
Moraxellales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Moraxellales	0.68 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.00 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	28.77 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1.37 %
Alphaproteobacteria bacterium 65-7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 65-7	0.68 %
Solibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae	0.68 %
Moraxellaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Moraxellales → Moraxellaceae	0.68 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.00 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	28.77 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	0.68 %
Occallatibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Occallatibacter	0.68 %
Candidatus Solibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter	0.68 %
Acinetobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Moraxellales → Moraxellaceae → Acinetobacter	0.68 %
Alphaproteobacteria bacterium 65-7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 65-7	0.68 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.00 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	28.77 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	0.68 %
Acinetobacter calcoaceticus/baumannii complex	species group	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Moraxellales → Moraxellaceae → Acinetobacter → Acinetobacter calcoaceticus/baumannii complex	0.68 %
Occallatibacter savannae	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Occallatibacter → Occallatibacter savannae	0.68 %
Candidatus Solibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter	0.68 %
Alphaproteobacteria bacterium 65-7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 65-7	0.68 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.00 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	28.77 %
Candidatus Koribacter versatilis Ellin345	isolate	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis → Candidatus Koribacter versatilis Ellin345	0.68 %
Acinetobacter baumannii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Moraxellales → Moraxellaceae → Acinetobacter → Acinetobacter calcoaceticus/baumannii complex → Acinetobacter baumannii	0.68 %
Occallatibacter savannae	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Occallatibacter → Occallatibacter savannae	0.68 %
Candidatus Solibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter	0.68 %
Alphaproteobacteria bacterium 65-7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 65-7	0.68 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.68 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000364\|INPhiseqgaiiFebDRAFT_100433237	Not Available	1064	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_101539596	All Organisms → cellular organisms → Bacteria → Acidobacteria	1070	Open in IMG/M
3300000955\|JGI1027J12803_100233971	Not Available	732	Open in IMG/M
3300000955\|JGI1027J12803_101887797	Not Available	615	Open in IMG/M
3300001867\|JGI12627J18819_10453668	All Organisms → cellular organisms → Bacteria	525	Open in IMG/M
3300004479\|Ga0062595_101013720	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	715	Open in IMG/M
3300005295\|Ga0065707_10559355	Not Available	715	Open in IMG/M
3300005439\|Ga0070711_100898290	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	756	Open in IMG/M
3300005439\|Ga0070711_101416889	Not Available	605	Open in IMG/M
3300005445\|Ga0070708_100756821	Not Available	914	Open in IMG/M
3300005445\|Ga0070708_102060785	Not Available	528	Open in IMG/M
3300005467\|Ga0070706_100065564	All Organisms → cellular organisms → Bacteria	3359	Open in IMG/M
3300005467\|Ga0070706_102116937	Not Available	509	Open in IMG/M
3300005468\|Ga0070707_100442248	All Organisms → cellular organisms → Bacteria	1260	Open in IMG/M
3300005518\|Ga0070699_100653026	Not Available	960	Open in IMG/M
3300005536\|Ga0070697_100134149	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2078	Open in IMG/M
3300005538\|Ga0070731_10795759	Not Available	627	Open in IMG/M
3300006173\|Ga0070716_101275452	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	593	Open in IMG/M
3300006800\|Ga0066660_11154264	Not Available	610	Open in IMG/M
3300006852\|Ga0075433_10790565	Not Available	829	Open in IMG/M
3300006854\|Ga0075425_100022552	All Organisms → cellular organisms → Bacteria	6909	Open in IMG/M
3300006854\|Ga0075425_102076702	Not Available	635	Open in IMG/M
3300006881\|Ga0068865_102057214	Not Available	519	Open in IMG/M
3300006904\|Ga0075424_102291421	Not Available	568	Open in IMG/M
3300007255\|Ga0099791_10584865	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	545	Open in IMG/M
3300007788\|Ga0099795_10011182	All Organisms → cellular organisms → Bacteria → Acidobacteria	2673	Open in IMG/M
3300009038\|Ga0099829_10986357	Not Available	699	Open in IMG/M
3300009038\|Ga0099829_11433882	Not Available	570	Open in IMG/M
3300009088\|Ga0099830_10021785	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4187	Open in IMG/M
3300009088\|Ga0099830_10452918	Not Available	1042	Open in IMG/M
3300009137\|Ga0066709_101953908	Not Available	814	Open in IMG/M
3300009143\|Ga0099792_10017306	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 65-7	3153	Open in IMG/M
3300009143\|Ga0099792_10238454	All Organisms → Viruses → Predicted Viral	1053	Open in IMG/M
3300009174\|Ga0105241_11591515	Not Available	632	Open in IMG/M
3300009174\|Ga0105241_12065763	Not Available	562	Open in IMG/M
3300010159\|Ga0099796_10133729	Not Available	964	Open in IMG/M
3300010159\|Ga0099796_10500650	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	544	Open in IMG/M
3300010333\|Ga0134080_10633397	Not Available	524	Open in IMG/M
3300010375\|Ga0105239_11665847	Not Available	738	Open in IMG/M
3300011270\|Ga0137391_10171259	Not Available	1892	Open in IMG/M
3300011270\|Ga0137391_11081347	Not Available	650	Open in IMG/M
3300011271\|Ga0137393_11626015	Not Available	535	Open in IMG/M
3300012189\|Ga0137388_11867533	Not Available	531	Open in IMG/M
3300012198\|Ga0137364_11322230	Not Available	536	Open in IMG/M
3300012202\|Ga0137363_10515216	All Organisms → cellular organisms → Bacteria → Acidobacteria	1006	Open in IMG/M
3300012202\|Ga0137363_11663252	Not Available	531	Open in IMG/M
3300012205\|Ga0137362_10112374	All Organisms → cellular organisms → Bacteria	2303	Open in IMG/M
3300012205\|Ga0137362_10197111	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1732	Open in IMG/M
3300012205\|Ga0137362_11305980	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	611	Open in IMG/M
3300012205\|Ga0137362_11551466	Not Available	549	Open in IMG/M
3300012207\|Ga0137381_10763942	All Organisms → cellular organisms → Bacteria	839	Open in IMG/M
3300012209\|Ga0137379_11313063	Not Available	629	Open in IMG/M
3300012210\|Ga0137378_11745565	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	528	Open in IMG/M
3300012350\|Ga0137372_11013772	Not Available	578	Open in IMG/M
3300012357\|Ga0137384_10303415	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1327	Open in IMG/M
3300012361\|Ga0137360_10266789	All Organisms → cellular organisms → Bacteria	1411	Open in IMG/M
3300012361\|Ga0137360_10651215	Not Available	903	Open in IMG/M
3300012361\|Ga0137360_11195017	Not Available	658	Open in IMG/M
3300012361\|Ga0137360_11635456	Not Available	549	Open in IMG/M
3300012362\|Ga0137361_10148172	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2095	Open in IMG/M
3300012362\|Ga0137361_10473443	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1150	Open in IMG/M
3300012362\|Ga0137361_11333915	Not Available	641	Open in IMG/M
3300012363\|Ga0137390_11391025	All Organisms → cellular organisms → Bacteria → Acidobacteria	646	Open in IMG/M
3300012582\|Ga0137358_10055007	All Organisms → cellular organisms → Bacteria	2657	Open in IMG/M
3300012582\|Ga0137358_10351778	Not Available	998	Open in IMG/M
3300012582\|Ga0137358_10440475	All Organisms → cellular organisms → Bacteria	880	Open in IMG/M
3300012582\|Ga0137358_11018089	Not Available	534	Open in IMG/M
3300012683\|Ga0137398_10763435	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	674	Open in IMG/M
3300012685\|Ga0137397_10347672	Not Available	1105	Open in IMG/M
3300012685\|Ga0137397_10804988	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	697	Open in IMG/M
3300012917\|Ga0137395_11038261	Not Available	585	Open in IMG/M
3300012917\|Ga0137395_11050301	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	580	Open in IMG/M
3300012923\|Ga0137359_10877888	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	774	Open in IMG/M
3300012923\|Ga0137359_11661019	Not Available	526	Open in IMG/M
3300012925\|Ga0137419_11858731	Not Available	516	Open in IMG/M
3300012925\|Ga0137419_11970488	Not Available	502	Open in IMG/M
3300012927\|Ga0137416_10306214	All Organisms → cellular organisms → Bacteria	1319	Open in IMG/M
3300012929\|Ga0137404_10214169	Not Available	1638	Open in IMG/M
3300012929\|Ga0137404_10630463	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	966	Open in IMG/M
3300012930\|Ga0137407_10657639	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	985	Open in IMG/M
3300012930\|Ga0137407_10772095	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	907	Open in IMG/M
3300012944\|Ga0137410_10763729	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	809	Open in IMG/M
3300012958\|Ga0164299_11363293	Not Available	546	Open in IMG/M
3300012986\|Ga0164304_10671500	Not Available	783	Open in IMG/M
3300012988\|Ga0164306_10362873	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1077	Open in IMG/M
3300015053\|Ga0137405_1045598	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1549	Open in IMG/M
3300015242\|Ga0137412_11084368	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	568	Open in IMG/M
3300015264\|Ga0137403_10018120	All Organisms → cellular organisms → Bacteria → Acidobacteria	7595	Open in IMG/M
3300015264\|Ga0137403_10038794	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4985	Open in IMG/M
3300015264\|Ga0137403_10057569	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3981	Open in IMG/M
3300015264\|Ga0137403_10161006	All Organisms → cellular organisms → Bacteria	2203	Open in IMG/M
3300015371\|Ga0132258_10126501	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Occallatibacter → Occallatibacter savannae	6084	Open in IMG/M
3300015372\|Ga0132256_102242078	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	650	Open in IMG/M
3300020140\|Ga0179590_1181474	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	577	Open in IMG/M
3300021401\|Ga0210393_10019982	All Organisms → cellular organisms → Bacteria → Acidobacteria	5202	Open in IMG/M
3300024347\|Ga0179591_1037438	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3103	Open in IMG/M
3300025906\|Ga0207699_10076845	All Organisms → cellular organisms → Bacteria	2058	Open in IMG/M
3300025910\|Ga0207684_10024018	Not Available	5201	Open in IMG/M
3300025910\|Ga0207684_10042958	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3832	Open in IMG/M
3300025910\|Ga0207684_11015138	Not Available	694	Open in IMG/M
3300025915\|Ga0207693_10063957	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2882	Open in IMG/M
3300025928\|Ga0207700_11329781	Not Available	640	Open in IMG/M
3300025928\|Ga0207700_11716835	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	553	Open in IMG/M
3300025939\|Ga0207665_10365847	Not Available	1091	Open in IMG/M
3300025939\|Ga0207665_10431076	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis → Candidatus Koribacter versatilis Ellin345	1009	Open in IMG/M
3300025939\|Ga0207665_11179452	Not Available	611	Open in IMG/M
3300025939\|Ga0207665_11484635	All Organisms → cellular organisms → Bacteria → Acidobacteria	539	Open in IMG/M
3300026374\|Ga0257146_1056707	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	635	Open in IMG/M
3300026514\|Ga0257168_1066945	All Organisms → cellular organisms → Bacteria → Acidobacteria	792	Open in IMG/M
3300026555\|Ga0179593_1109401	All Organisms → cellular organisms → Bacteria	1596	Open in IMG/M
3300026555\|Ga0179593_1110176	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2164	Open in IMG/M
3300026557\|Ga0179587_10548309	All Organisms → cellular organisms → Bacteria → Acidobacteria	760	Open in IMG/M
3300026557\|Ga0179587_10573535	Not Available	742	Open in IMG/M
3300027667\|Ga0209009_1201255	Not Available	503	Open in IMG/M
3300027846\|Ga0209180_10041121	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2524	Open in IMG/M
3300027857\|Ga0209166_10318836	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Moraxellales → Moraxellaceae → Acinetobacter → Acinetobacter calcoaceticus/baumannii complex → Acinetobacter baumannii	816	Open in IMG/M
3300027867\|Ga0209167_10721426	Not Available	544	Open in IMG/M
3300027903\|Ga0209488_10531640	All Organisms → cellular organisms → Bacteria	859	Open in IMG/M
3300027903\|Ga0209488_10711209	All Organisms → cellular organisms → Bacteria → Acidobacteria	719	Open in IMG/M
3300028536\|Ga0137415_10356439	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1267	Open in IMG/M
3300031022\|Ga0138301_1571253	Not Available	553	Open in IMG/M
3300031057\|Ga0170834_108109193	Not Available	899	Open in IMG/M
3300031057\|Ga0170834_113506820	Not Available	1072	Open in IMG/M
3300031122\|Ga0170822_13132824	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1228	Open in IMG/M
3300031128\|Ga0170823_15354349	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	988	Open in IMG/M
3300031231\|Ga0170824_104219863	Not Available	640	Open in IMG/M
3300031231\|Ga0170824_105426378	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	907	Open in IMG/M
3300031231\|Ga0170824_109270102	Not Available	623	Open in IMG/M
3300031231\|Ga0170824_111600343	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1171	Open in IMG/M
3300031231\|Ga0170824_113106110	Not Available	528	Open in IMG/M
3300031231\|Ga0170824_116058984	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	570	Open in IMG/M
3300031231\|Ga0170824_119076582	Not Available	804	Open in IMG/M
3300031231\|Ga0170824_121495575	Not Available	1076	Open in IMG/M
3300031231\|Ga0170824_126468936	Not Available	615	Open in IMG/M
3300031446\|Ga0170820_10288109	Not Available	582	Open in IMG/M
3300031469\|Ga0170819_11976540	Not Available	531	Open in IMG/M
3300031474\|Ga0170818_110740491	Not Available	1045	Open in IMG/M
3300031718\|Ga0307474_10928324	Not Available	689	Open in IMG/M
3300031720\|Ga0307469_11199398	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	717	Open in IMG/M
3300031820\|Ga0307473_10733142	Not Available	698	Open in IMG/M
3300031962\|Ga0307479_10038180	All Organisms → cellular organisms → Bacteria	4601	Open in IMG/M
3300032174\|Ga0307470_10930642	Not Available	685	Open in IMG/M
3300032174\|Ga0307470_11649717	Not Available	538	Open in IMG/M
3300032180\|Ga0307471_100330356	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter	1626	Open in IMG/M
3300032180\|Ga0307471_102455821	Not Available	659	Open in IMG/M
3300032180\|Ga0307471_103107728	Not Available	589	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	93.15%
Host-Associated	Host-Associated	6.85%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	93.15%
Plants	Host-Associated → Plants	6.85%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	93.15%
Rhizosphere	Host-Associated → Plants → Rhizosphere	5.48%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.37%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	77.40%
Loam	Environmental → Terrestrial → Soil → Loam	15.75%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	4.79%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.68%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.68%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.68%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	52.74%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	19.86%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	14.38%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	4.79%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	4.11%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.37%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.68%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.68%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.68%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.68%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	47.26%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	14.38%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	10.96%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	6.16%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.42%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.74%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.74%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.05%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	2.05%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	2.05%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.37%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.68%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.68%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.68%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.68%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.68%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.68%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.68%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300001867	Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005295	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005538	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300007788	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300010159	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3	Environmental	Open in IMG/M
3300010333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300015053	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015242	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300020140	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300024347	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026374	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-08-A	Environmental	Open in IMG/M
3300026514	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-13-B	Environmental	Open in IMG/M
3300026555	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027667	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M2 (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027857	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027867	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300031022	Forest soil microbial communities from Spain - ITS-tags Site 9-Mixed-thinned forest site A3_MS_spring Metatranscriptome (Eukaryote Community Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031122	Oak Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031128	Oak Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031469	Fir Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPhiseqgaiiFebDRAFT_1004332371	3300000364	Soil	NGAEAASVLKSTFPKRPSFLFTIYTDLNADALCGFTGVDFISKVDGIAKLLEQVDALLPPYTSDEVPLW*
INPhiseqgaiiFebDRAFT_1015395963	3300000364	Soil	ADAEPIRLSLAHDVFLNGAEAASVLKNALPETPIILFTMYTDLHADSLSAFIGVDFISKVPGIPKLLERVDALLPE*
JGI1027J12803_1002339711	3300000955	Soil	GAEAATILRNTLPETPIILFTMYTDLHADSLSGFLGVDFISKVDGLPKLLERVDALLPPPSNGEIPLW*
JGI1027J12803_1018877971	3300000955	Soil	ATILRNTLPGTPIILFTMYTDLHAESLSGFLGVEFISKVDGLPKLLERVDALLPPRSNDEIPLW*
JGI12627J18819_104536681	3300001867	Forest Soil	PETPIILFTMYTDLHADSLSAFFGVDFISKVDGMPKLLERVDALLPPTPNGEDIC*
Ga0062595_1010137201	3300004479	Soil	MPRLNGAEAATVLKHTLPQTPIILFTMYTELSADALSGFLGVDFISKVDGIPKLLERVDALLPPTLPDGQFNLW*
Ga0065707_105593553	3300005295	Switchgrass Rhizosphere	KNTLPETPIILFTMYTDLHADSLSAFIGVEFVSKTDGVSKLLERVDALLPD*
Ga0070711_1008982903	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MPETPVILFTLTDLHIDSLSAAIDVDLISKAYGVSKLLERVDALLPPTLPNEGATLW*
Ga0070711_1014168891	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MPETPVILFTLTDLHIDSLSAAIDVDLISKAEGVSKLLERVDSLLPPALPNEGATSR*
Ga0070708_1007568211	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	RLNGAEAATILKEDMPETPVILFTMYTDLVADSLCAAIGVDFISKADGVSKLLERVDALLPPDTASQTRGA*
Ga0070708_1020607851	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MSRLNGAEAATVLKNALPETPVILFTKYADMLSETLCKAIGVVCISKTDGASKLLERVDALLSPA*
Ga0070706_1000655641	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MSRLNGAEAATVLKNALPETPVILFTKYADMLSETLCKAIGVVCISKTDGASTLLERVDALLSPA*
Ga0070706_1021169371	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	LNGAEAATILKEDMPETPVILFTMYTDLVADSLCAAIGVDFISKADGVSKLLERVDALLPPDTASQTRGA*
Ga0070707_1004422482	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MPRLNGAEAAYVLKNDMPETPVILFTMTDLNIGSMCAAIDVDFISKADGTSKLLERVDALLLPN*
Ga0070699_1006530262	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	EAAAVLKNEMPETPVILFTMTDLHIDSLCAAIDVDFISKVDGIPKLLERVDALLPPTRPNEEATLF*
Ga0070697_1001341491	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	PVILFTLTDLHIDSLSAAIDVDLISKADGVSKLLERVDALLPPTLPNEGATLW*
Ga0070731_107957591	3300005538	Surface Soil	TPVILFTYTDLRADSLCSVIGVDFISKIDGLPKLLERVDALLPPPPATEEATLW*
Ga0070716_1012754523	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	KEDMPETPVILFTFTDLLPNTLCEAIGVDFISKADGVSRLLARVDALFPPTLLNEGATLW
Ga0066660_111542642	3300006800	Soil	LNGVEAAAVLKNDMPETPVILFTMTELHVDYLCAAIDVDFISKTDGIPKLLERVAALLPPN*
Ga0075433_107905652	3300006852	Populus Rhizosphere	VLKNTPPETPIILFTMYTDLHADALCGFIGVDFISKVDGLPKLLERVDAFLPNWNDDEIPFW*
Ga0075425_1000225526	3300006854	Populus Rhizosphere	MSSEWAEAASVLKNALPETPIILFTMYTDLHADSLSAFIGVDFISKVPGIPKLLERVDALLPE*
Ga0075425_1020767021	3300006854	Populus Rhizosphere	LKNTLPETPIILFTMHTDLHTDSLSAFIGVEFISKVDGIPKLLERVDALLPPNPNEAPIHH*
Ga0068865_1020572142	3300006881	Miscanthus Rhizosphere	VEVATILRNTLPETPIILFTMYTDLHADSLGGFLGVDFISKVDGLPKLLERVDALLPPRSNDEIPLW*
Ga0075424_1022914211	3300006904	Populus Rhizosphere	AEAAIVLKHTLPETPIILFTLYTDLHADSICTFIGVDFISKVDGIPKLLERVDVLLPPRSNDETTLP*
Ga0099791_105848652	3300007255	Vadose Zone Soil	LPETPVILFTMNTDLHAESLCTAIGVDFISKVDGIPKLLERVDALLPPIVPDDGATLS*
Ga0099795_100111824	3300007788	Vadose Zone Soil	MPRLNGAEAATVLKNDLPETPVILFTYTDLLPNSLCEALGVDFISKTDGILKLLERVDALLPPTLPNEETTLW*
Ga0099829_109863571	3300009038	Vadose Zone Soil	TVLKNDLPDTPVILFTYTDLRLDSLSSALGVDFISKVDGIPKLLERVDALLPPTLPNDGATLS*
Ga0099829_114338822	3300009038	Vadose Zone Soil	TPVILFTYTDLRLDSLSSAIGVDFISKVDGIPKLLERVDALLPPTLPNDGATLS*
Ga0099830_100217857	3300009088	Vadose Zone Soil	NGAEAATVLKNDMPETPVILFTYTDLHADSLCAAIGIEFISKTDGIPKLLERVDALLPPN
Ga0099830_104529184	3300009088	Vadose Zone Soil	AEAATVLKNDLPETPVILFTYTDLRLDSLSSAIGVDFISKVDGIPKLLERVDALLPPTLPNDGATLS*
Ga0066709_1019539082	3300009137	Grasslands Soil	MPRLNGAEAAAVLKNDMPETPVILFTLTDLPIDSLCAAIDVDFISKADGVSKLLEPVDALLPPA*
Ga0099792_100173061	3300009143	Vadose Zone Soil	ETPVILFTMTDLNIGSMCAAIDVDFISKVDGIPKLLERVDALLPTTLPNDGATLS*
Ga0099792_102384544	3300009143	Vadose Zone Soil	ETPVILFTMTDLNIGSMCAAIDVDFISKVDGIPKLLERVDALLRPPPPNEGATLW*
Ga0105241_115915153	3300009174	Corn Rhizosphere	VLKNTLPETPIILFTLHTDLHADSLSAFIGVEFVSKVDGVSKLLERVDALLPD*
Ga0105241_120657631	3300009174	Corn Rhizosphere	RLNGAEAASVLKNTLPEIPIILFTMYTDLHADCLCAFIGVDFISKVDGIPKLLERVDALLPH*
Ga0099796_101337292	3300010159	Vadose Zone Soil	AVLKNAMPETPVILFTLNTDLYADALSAALGVDFISKVDGIPKLLERVDALLLPTLPNEGATLW*
Ga0099796_105006501	3300010159	Vadose Zone Soil	MPRLNGAEAAYVLKNDMPETPVILFTMTDLNICSMCAAIDVDFISKTDGIPKLLERVDALLPPPPPNEGATLW*
Ga0134080_106333971	3300010333	Grasslands Soil	MPRLNGAEAAAVLKNDMPETPVILFTLTDLPIDFLCAAIDVDFISKADGVSKLLERVDALLPPDTASQTWGV*
Ga0105239_116658471	3300010375	Corn Rhizosphere	AMPRLNGAEAATVLKKTLPEIPIILFTMYTDLHADSLSAFMGVEFVSKVDGVSKLLERVDALLPD*
Ga0137391_101712591	3300011270	Vadose Zone Soil	AAYVLKNDMPETPVILFTMTDLNIGSMCAAIDVDFISKADGIPKLLERVDALFPSN*
Ga0137391_110813471	3300011270	Vadose Zone Soil	AAYVLKNDMPETPVILFTMTDLNIGSMCAAIDVDFISKADGVPKLLERVDALLPPIPPNEGATPW*
Ga0137393_116260151	3300011271	Vadose Zone Soil	LNGAEAAYVLKNDMPETPVILFTMTDLNIGSMCAAIDIDFISKADGIPKLLERVDALLPPPPPNEGATLW*
Ga0137388_118675331	3300012189	Vadose Zone Soil	MPRVNGAEAAAVLKNDFPETPVILFTYTDLRLDSLSSAIGVDFISKVDGIPKLLERVDALLPPTLPNDVATLS*
Ga0137364_113222302	3300012198	Vadose Zone Soil	NGAEAAAVLKNDMPETPVILFTLTDLPIDSLCAAIDVDFISKADGVSKLLERVDALLPPALPNEGATLW*
Ga0137363_105152162	3300012202	Vadose Zone Soil	MEAATILKNAMPETPVILFTMFTDLHADSLCAAMGVDFISKTDGVSKLLERVDALLPPSLPSEGATLW*
Ga0137363_116632522	3300012202	Vadose Zone Soil	LNGAEAATVLKNDLPETPVILFTYTDLHADSLCSAIGVDFISKVDGIPKLLERVDALLPPALPNEGATLW*
Ga0137362_101123743	3300012205	Vadose Zone Soil	MPRLNGAGAAAVLKNEMPQTPVILFTLTELRVDTLCAAIDIDFISKVDGMSKLLERVDALLPPSPPNEGATLC*
Ga0137362_101971114	3300012205	Vadose Zone Soil	YVLKNDMPETPVILFTMTDLNIGPMCAAIDVDFISKTDGIPKLLERVDALLPPTPPNEGATRW*
Ga0137362_113059802	3300012205	Vadose Zone Soil	YVLKNDMPETPVILFTMTDLNIGSMCAAIDVDFISKVDGIPKLLERVDALLPPIVPNDGATLS*
Ga0137362_115514661	3300012205	Vadose Zone Soil	EAAAVLRNDMPETPVILFTMTELHVDYLCAAIDVDFISKADGLPKLLKRIDALLPPNSVA
Ga0137381_107639421	3300012207	Vadose Zone Soil	NGIEAATVLKNAMPGTPVILFTMYAAMLSEALCKAIGVVCISKTDGVPKLLERVDALLPPD*
Ga0137379_113130631	3300012209	Vadose Zone Soil	LNGAEAATILKEDMPETPVFLFTMYPDLVADSLCAAIGVDFISKADGVSKLLERVDALLPPDTASQTWGV*
Ga0137378_117455651	3300012210	Vadose Zone Soil	MPRLNGAEAATILKEDMPETPVILFTYTDLLPNSLCEAIGVDFISKADGVSKLLEHVEALFPPTLPNEGAILW*
Ga0137372_110137721	3300012350	Vadose Zone Soil	AEAATVLKNDMPETPVILFTMNTDLHADTVCAAIGIDFISKVDGIPKLLERVDALLPPTAPNEGETLW*
Ga0137384_103034151	3300012357	Vadose Zone Soil	MPETPVILFTYTDLLPNSLCEAIGVDFISKADGVSKLLEHVEALFPPTLPNEGAILW*
Ga0137360_102667895	3300012361	Vadose Zone Soil	EAATVLKNDLPETPVILFTMYNDLRVDALCAAIGVDFISKTDGIPKLLERVDALLPPTPPNEGATLW*
Ga0137360_106512152	3300012361	Vadose Zone Soil	VLKNAMPETPVILFTLNTDLYADALSAALDVDFISKVDGIPKLLERVDALLPPTLPNEGATLW*
Ga0137360_111950172	3300012361	Vadose Zone Soil	LKNDMPETPVILFTMTDLNIGSMCAAIDVDFISKADGVPKLLERVDALFSPN*
Ga0137360_116354561	3300012361	Vadose Zone Soil	MPETPVILFTMTDLHVDFLCAAIDVDFISKVDGIPKLLERVDALLPPTLRNEGETLW*
Ga0137361_101481721	3300012362	Vadose Zone Soil	PVILFTMNTDLSADALCAAIGVDFISKADGASKLLERVDALFPPTLPNEGATLW*
Ga0137361_104734433	3300012362	Vadose Zone Soil	GAETAYVLKNDMPETPVILFTMTDLNIGPMCAAIDVDFISKTDGIPKLLERVDALLPPTPPNEGATRW*
Ga0137361_113339152	3300012362	Vadose Zone Soil	DMPETPVILFTMTDLNIGSMCAAIDVDFISKADGTSKLLERVDALLPPTSVS*
Ga0137390_113910251	3300012363	Vadose Zone Soil	NEMPETPVILFTYTDLRLDSLCEAIGVDFISKVDGIPKLLERVDALFPPN*
Ga0137358_100550071	3300012582	Vadose Zone Soil	NGAEAATVLKNAMPETPLILFTYTDMLPNSLCEAIGVDFISKTDGIPKLLERVDALLPRTLPSEAATLF*
Ga0137358_103517781	3300012582	Vadose Zone Soil	NAMPQTAVILFTMNTDLHAENLSAAIGIEFISKVDGIPKLLERVDALLPPALPNEGETLW
Ga0137358_104404753	3300012582	Vadose Zone Soil	AVLKNEMPQTPVILFTLTEPRVDTLCAAIDIDFISKVDGMSKLLERVDALLPPSPPNEGATLC*
Ga0137358_110180891	3300012582	Vadose Zone Soil	KNEMPETPVILFTMTDLHIDTLCAAIDVDFISKVDGIPKLLERVDALLPPNAASQRSV*
Ga0137398_107634351	3300012683	Vadose Zone Soil	DMPETPVILFTMTDLNIGSMCAAIDVDFISKVDGIPKLLERVDALLRPPPPNEGATLW*
Ga0137397_103476723	3300012685	Vadose Zone Soil	LNGAEAASILKEDMPETPVILFTMTDLLPNSLCEAIGVDFISKTDGIPKLLERVDALLPPTVPNDGATLS*
Ga0137397_108049882	3300012685	Vadose Zone Soil	ILKNAMPETPDILFTMYTDLQADSLSAALGVDFISKADGVSKLVERVDALLLPN*
Ga0137395_110382611	3300012917	Vadose Zone Soil	AAYVLKNDMPETPVILFTMTDLNIGSMCAAIDVDFISKADGVLKLLERVDALFPPH*
Ga0137395_110503012	3300012917	Vadose Zone Soil	ILKNAMPETPVILFTMYTDLQADSLSAALGVDFISKADGVSKLVERVDALLLPN*
Ga0137359_108778883	3300012923	Vadose Zone Soil	GAETAYVLKNDMPETPVILFTMTDLNIGPMCAAIDVDFISKVDGIPKLLERVDALLRPPPPNEGATLW*
Ga0137359_116610192	3300012923	Vadose Zone Soil	VLKNEMPETPVILFTLTDLHIDSLSAAIDVDLISKADGVSKLLERVDALLPPV*
Ga0137419_118587311	3300012925	Vadose Zone Soil	VLKNEMPETPVILFTYTDLRIDSLCQAIGVDFISKVEGIPKLLERVDSLFPPN*
Ga0137419_119704881	3300012925	Vadose Zone Soil	GAEAAYVLKNDMPETPVILFTMTDLNIGSMCAAIDVDFISKVDGIPKLLERVDALLRPPPPNEGATLW*
Ga0137416_103062142	3300012927	Vadose Zone Soil	LNGAEAASILKKAMPETPVILFTMYTDLQANSLSTALGVDFISKTDGIPKLLERVDALLSPN*
Ga0137404_102141691	3300012929	Vadose Zone Soil	LAFSIASRLNGAEAAAVLKNEVPETPVILFTLTDLHIDSLGAAIDVDLISKAGGVSKLLERVDALLPPAPKQ*
Ga0137404_106304631	3300012929	Vadose Zone Soil	VEAATVLKNAMPDTPVILFTMYADRLSETLCKAIGVVCISKADGVSKLLERVDALLPPA*
Ga0137407_106576391	3300012930	Vadose Zone Soil	TILKEDMPETPVILFTYTDLLPNSLCEAIGVDFISKADGVSKLLERVDALFPPTLPNEGATLW*
Ga0137407_107720951	3300012930	Vadose Zone Soil	MPETPIILFTMNTDLRANALCEAIGIDFISKVDGIPKLLERVDALLPPTVTNEGETLW*
Ga0137410_107637291	3300012944	Vadose Zone Soil	TPVILFTMNTDVLAENLSAAISIEFISKVDGIPKLLERVDALLPPSLPNEGETLC*
Ga0164299_113632933	3300012958	Soil	VLKNTLPETPIILFTMYTDLHADSLSAFIGVEFVSKVDGVSKLLERVDALLPD*
Ga0164304_106715003	3300012986	Soil	NGVEAASVLKNALPETPIILFTMYTDLHADSLSAFIGVEFVSKVDGVSKLLERVDALLPD
Ga0164306_103628733	3300012988	Soil	MPRLNGVEAASVLKNALPETPIILFTMYTDLHADSLSAFIGVEFVSKVDGVSKLLERVDALLPD*
Ga0137405_10455984	3300015053	Vadose Zone Soil	NEMPETPVILFTLTDLQIDSLSAAIDVDLISKADGVSKLLERVDALLPPAPNQ*
Ga0137412_110843682	3300015242	Vadose Zone Soil	MPRLNGAEAATVLKNDLPETPVILFTYTDLRLDSLCEAIGVDFISKVDGIPKLLERVDALFPPN*
Ga0137403_1001812010	3300015264	Vadose Zone Soil	PRLNGAEAATILKEDMPETPVILFTMYTDLVADALCAAIGVDFISKADGVSKLLERVDALLPPDTASQTWGV*
Ga0137403_100387948	3300015264	Vadose Zone Soil	LAMPTLNGVEAATVLKNAVPETPVILFTMYAGMLSETLCKAIGVVCISKTDGASKLLERVDALLSPA*
Ga0137403_100575699	3300015264	Vadose Zone Soil	LAMPRLNGAEAAYVLKNDMPETPVILFTMTDLNIGPMCAAIDVDFISKVDGIPKLLERVDALLPPIVPNDGATLS*
Ga0137403_101610061	3300015264	Vadose Zone Soil	PRLNGAEAATILKEDMPETPVILFTYTDLLPNSLCEAIGVDFISKADGVSKLLERVDALFPPTLPNEGATLR*
Ga0132258_101265011	3300015371	Arabidopsis Rhizosphere	LNGAEAATVLKKTLPEIPIILFTMYTDLHADSLCGFIGVDFISKVDGIPKLLERVDALLPD*
Ga0132256_1022420782	3300015372	Arabidopsis Rhizosphere	DLAMPRLNGAEAASVLKNALPETPIILFTMFTDLHAYTLRAFIGVDFISKVEGIPKLLERIDSLLPPPPSNEETPW*
Ga0179590_11814742	3300020140	Vadose Zone Soil	LLDLSMPRVNGAEAATVLKNDLPDTPVILFTYTDLHADSLCSALGVDFISKVDGIPKLLERVDALLPPTLPNDGATLS
Ga0210393_100199825	3300021401	Soil	MPRLNGAEAAYVLKNDMPETPVILFTMTDLNIGPMCAAIDVDFVSKSDGVPKLLERVDALFPPNQGISPGLPSGA
Ga0179591_10374381	3300024347	Vadose Zone Soil	MPRLNGAEAAYVLKNDMPETPVILFTMTDLNIGPMCAAIDVDFISKVDGIPKLLERVDALLPPIVPND
Ga0207699_100768454	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	NGAEAAAVLKNDMPETPIILFTMTELHVDYLCAAIDVDFISKADGVSKLLERVDDLLPPN
Ga0207684_100240186	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MPRLNGAEAATILKEDMPETPVILFTMYTDVVADSLCAAIGVDFISKADGVSKLLERVDALLAPDTASQLGASEAMP
Ga0207684_1004295810	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MSRLNGAEAATVLKNALPETPVILFTKYADMLSETLCKAIGVVCISKTDGASTLLERVDALLSPA
Ga0207684_110151381	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	AVLKNEMPETPVILFTMTDLDVDFLCAAIDVDFISKAEGVSKLLERVDALFPPNAASPTWSA
Ga0207693_100639571	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	YLILLDLVMPLLNGAEAAAVLKNEMPETPVILFTLTDLHIDSLSAAIDVDLISKAEGVSKLLERVDSLLPPALPNEGATSR
Ga0207700_113297811	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	PETPVILFTMTDLPIDSLCAAIDVDFISKADGISKLLERVDALFSQSLPSEGETLC
Ga0207700_117168352	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	VAGHESRAEVATVLKNGRSGTPIILFTYTDLLPKSLCETIGAVFISKTDGILKLLERVDALFPPTPASEGDATLF
Ga0207665_103658472	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MPETPVILFTMYTDLIADAPCAVIGVDFISKADGVSKLLERVDALLPPDTALQTWGSDAK
Ga0207665_104310761	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	LNGAEAATILRNTLPGTPIILFTMYTDLHAELLSGFLGVEFISKVDGLPKLLERVDALLPPRSNDEIPLW
Ga0207665_111794521	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	GAEAATILKEDMPETPVILFTMYTDVVADSLCAAIGVDFISKADGVSKLLERVDALLPPDTASQTWGV
Ga0207665_114846351	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	LKNEMPETPVILFTYTELRADSLCAGIGVDFISKVDGIPKLLERVDALFPLTDRRAYT
Ga0257146_10567071	3300026374	Soil	DMPETPVILFTMTDLNIGSMCAAIDVDFISKTDGIPKLLERVDALLPPPPPNEGATLW
Ga0257168_10669452	3300026514	Soil	MPRLNGAEAAYVLKNDMPETPVILFTMTDLNIGSMCAALGVDFISKADGVPKLLERVDALLPPPPPNEGATL
Ga0179593_11094011	3300026555	Vadose Zone Soil	MEAATILKNAMPETPVILFTMFTDLHADSLCAAMGVDFISKTDGVSKLLERVDALLPPSLPSEGATLW
Ga0179593_11101763	3300026555	Vadose Zone Soil	VNGAEAATVLKNDLPDTPVILFTYTELHADSLCTAIGIEFISKTDGIPKLLERVDALLPPTVPNDGATLS
Ga0179587_105483092	3300026557	Vadose Zone Soil	DLAMPRVNGAEAAAVLKNEMPETPVILFTYTDLRLDSLCEAIGVDFISKVDGIPKLLERVDALFPPN
Ga0179587_105735353	3300026557	Vadose Zone Soil	AVLKNEMPETPVILFTMTNLPIDSLWAAIDVDFISKADDISKLLERVDALFPPN
Ga0209009_12012551	3300027667	Forest Soil	GAEVAAVLKNEMPETPVILFTMTDLDVDFLCAAIDVDFISKAEGVSKLLERVDALFPPN
Ga0209180_100411215	3300027846	Vadose Zone Soil	ETPVILFTMTDLNIGSMCAAIDVDFISKTDGIPKLLERVDALLPPPPPNEGAPLW
Ga0209166_103188361	3300027857	Surface Soil	EAATVLRNDLPGTPVILFTYTDLRADSLCSVIGVDFISKIDGLPKLLERVDALLPPPPATEEATLW
Ga0209167_107214261	3300027867	Surface Soil	RLNGAEAATVLRNDLPGTPVILFTYTDLRADSLCSVIGVDFISKIDGLPKLLDRVDALLPPPGD
Ga0209488_105316403	3300027903	Vadose Zone Soil	LDRSRPRVNGAEAATVLKNDLPDTPVILFTYTDLHADSLCSAIGVDFISKTDGIPKLLERVDALLPPTLPNNSATLS
Ga0209488_107112091	3300027903	Vadose Zone Soil	PRLNGAEAAAVLKNEMPETPVILFTYTDLRLDTLCEAIGVDFISKVDGIPKLLKRVDALFPPN
Ga0137415_103564391	3300028536	Vadose Zone Soil	MPRVNGAEAATVLKNDFPETPVILFTYTDLRLDSLSSAIGVDFISKVDGIPKLLERVDALLPPTLPNDGATLS
Ga0138301_15712532	3300031022	Soil	VASILKKAMPETPVILFTMYTDLLADSICAAMGVDFISKADGVSKLVERVDALLLPN
Ga0170834_1081091932	3300031057	Forest Soil	LAMPRLNGAEAATVLRNDLPKTPAFLFRLTDVRPDALCEALGVGFISKTEGIPKLIERVDALLPATLPNEGATLW
Ga0170834_1135068201	3300031057	Forest Soil	PVILFTMTDLNIGSMCAAIDVDFVSKADGVPKLLERVDALFPPIPPDEGATLW
Ga0170822_131328241	3300031122	Forest Soil	GAEAAYVLKNDMPETPVILFTMTDLNIGSMCAAIDVDFVSKADGVPKLLERVDALLPPIPPNQEATLW
Ga0170823_153543491	3300031128	Forest Soil	RLNGAEVAAVLKNEMPETPVILFTLTDLHIDSLCAAIDVDFISKVDGIPKLLERVDALLPPATRRDDGETLF
Ga0170824_1042198632	3300031231	Forest Soil	PRLNGAEAAYVLKNDMPETPVVLFTMTDLNIGSMCAAINVDLISKADGVPKLLERVDALLPPIPPNERASLS
Ga0170824_1054263783	3300031231	Forest Soil	LNGAEAAAVLKNEMPKTPVILFTLTELHVDFLCAAIDVDFISKVDGIPKLLERVDALLPPALPNEGATLW
Ga0170824_1092701021	3300031231	Forest Soil	LRNDMPKTPVILFTLTELHVDNLCAAIDVDFISKTDGIPKLLERVDALLPPTLPSEGATL
Ga0170824_1116003431	3300031231	Forest Soil	AAYVLKTDMPETPVVLFTMTDLNIGPMCAAIDVDFISKVDGIPKLLDRVDALLPPAPPNEGATLW
Ga0170824_1131061101	3300031231	Forest Soil	LRNNMPETPIILFTLTDLNIDSLCAAIDVDFVSKADGVSKLLERVDALFPPNAASQLGCA
Ga0170824_1160589842	3300031231	Forest Soil	RLNGAEVAAVLKNEMPETPVILFTLTDLHIDSLCAAIDVDFISKVDGIPKLLERVAAILPPATRRDDGATLF
Ga0170824_1190765822	3300031231	Forest Soil	AEAATVLRNDLPKTPVILFTLTDIRPDALCEALGVDFISKTDGIPKLIERVDALLPGKLADEGTTLW
Ga0170824_1214955752	3300031231	Forest Soil	MPRLNGAEAAAVLKNDMPKTPVVLFTLTELHVDNLCAAIDVDFISKADGVSKLLERVDALLPPTPPSEGATLW
Ga0170824_1264689361	3300031231	Forest Soil	MPLLNGAEAAAILRNNMPETPVILFTMTDLNIGSMCAAIDVDFVSKADGVPKLLERVDALFPPIPPDEGATLW
Ga0170820_102881092	3300031446	Forest Soil	GAEAATVLKNDLPETPVILFTYTDLHADSLCAAIGIEFISKTDGIPKLLERVDALLPPSPANEGATLF
Ga0170819_119765401	3300031469	Forest Soil	ETPVILFTMTDLNIGPMCAAIDVDFISKVDGIPKLLERVDALLPPSPANEGATLF
Ga0170818_1107404912	3300031474	Forest Soil	LAMPRLNGAEAAYVLKNDMPETPVILFTMTDLNIGSMCAAIDIDFISKADGVPKLLERVDALFPPN
Ga0307474_109283243	3300031718	Hardwood Forest Soil	MPRLNGAEAATVLKNDMPETPVILFTLYTDLHADSVCAAIGVDFISKADGIPKLLERVDRLLPPNAASPTWSV
Ga0307469_111993981	3300031720	Hardwood Forest Soil	AVLKNDMPETPVILFTYTDLHADSLCAAIDVDFISKVDGIPRLLERVDALLPPTLPNEGATLW
Ga0307473_107331421	3300031820	Hardwood Forest Soil	LNGAEAAAVLKNDMPETPVILFTMTDLHIDSLCAAIDVDFISKVDGIPKLLERVDALFPP
Ga0307479_100381804	3300031962	Hardwood Forest Soil	MPRLNGAQAAAVLKNDMPEAAVILFTLTELHAGNLCAAIDVDFISKADGVSKLLGPVDALLPPTLPNEEAPLR
Ga0307470_109306421	3300032174	Hardwood Forest Soil	SMPGLNGAEAAAVLKNDMPETPVILFTMTELRVDTLCEAIDVDFISKADGVSKLLEKVDALFPPTLPNEGATLF
Ga0307470_116497172	3300032174	Hardwood Forest Soil	LLDLAMPPRLNGVEAATVLRHAMPEAPVILFTRYADMLSETLCKAIGVVCISKTDGTSKLLERVDALLSPA
Ga0307471_1003303561	3300032180	Hardwood Forest Soil	LAMPRLNGVEAASILKGILPKTPIILFTMHTDLHADSLSAFINVDFVSKVDGVSRLLERVDTLLPPIVPDDGVALH
Ga0307471_1024558211	3300032180	Hardwood Forest Soil	MPRLNGVEAASIWKRIRPKTPIILFTMHTDLHADSLSAFINVDLVSKVDGVSRLLERVDALLPPIAPNAGATAR
Ga0307471_1031077281	3300032180	Hardwood Forest Soil	DLAMPRLNGVEAASVLKNALPETPIILFTMYTDLHADSLSAFIGVEFVSKVDGVSKLLERVDALLPD

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F049858

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences