NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F049862

Metagenome / Metatranscriptome Family F049862

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F049862
Family Type Metagenome / Metatranscriptome
Number of Sequences 146
Average Sequence Length 84 residues
Representative Sequence MDQRSKFLGISLVALLALVSAACSSTGTSRISMSSICKATGGTYANGTCQPAPNPQTAAQLCAAHGGVYMEGGDYCEVANNMFWKP
Number of Associated Samples 105
Number of Associated Scaffolds 146

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 89.73 %
% of genes near scaffold ends (potentially truncated) 25.34 %
% of genes from short scaffolds (< 2000 bps) 76.03 %
Associated GOLD sequencing projects 95
AlphaFold2 3D model prediction Yes
3D model pTM-score0.47

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (96.575 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil
(26.027 % of family members)
Environment Ontology (ENVO) Unclassified
(33.562 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(60.274 % of family members)


 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      

 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Fibrous Signal Peptide: Yes Secondary Structure distribution: α-helix: 31.58%    β-sheet: 19.30%    Coil/Unstructured: 49.12%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.47
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 146 Family Scaffolds
PF02321OEP 4.11
PF00924MS_channel 3.42
PF17090Ytca 2.74
PF13367PrsW-protease 2.74
PF00510COX3 2.74
PF01434Peptidase_M41 2.74
PF07690MFS_1 2.05
PF12833HTH_18 2.05
PF09678Caa3_CtaG 1.37
PF00196GerE 1.37
PF03729DUF308 1.37
PF00378ECH_1 1.37
PF00072Response_reg 0.68
PF01541GIY-YIG 0.68
PF00206Lyase_1 0.68
PF00496SBP_bac_5 0.68
PF01019G_glu_transpept 0.68
PF04632FUSC 0.68
PF00486Trans_reg_C 0.68
PF04069OpuAC 0.68
PF04342DMT_6 0.68
PF00005ABC_tran 0.68
PF01654Cyt_bd_oxida_I 0.68
PF00691OmpA 0.68
PF00210Ferritin 0.68
PF13533Biotin_lipoyl_2 0.68
PF00529CusB_dom_1 0.68
PF02518HATPase_c 0.68
PF14285DUF4367 0.68
PF13442Cytochrome_CBB3 0.68
PF10518TAT_signal 0.68
PF02322Cyt_bd_oxida_II 0.68

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 146 Family Scaffolds
COG1538Outer membrane protein TolCCell wall/membrane/envelope biogenesis [M] 8.22
COG0668Small-conductance mechanosensitive channelCell wall/membrane/envelope biogenesis [M] 3.42
COG3264Small-conductance mechanosensitive channel MscKCell wall/membrane/envelope biogenesis [M] 3.42
COG0465ATP-dependent Zn proteasesPosttranslational modification, protein turnover, chaperones [O] 2.74
COG1845Heme/copper-type cytochrome/quinol oxidase, subunit 3Energy production and conversion [C] 2.74
COG3247Acid resistance membrane protein HdeD, DUF308 familyGeneral function prediction only [R] 1.37
COG0405Gamma-glutamyltranspeptidaseAmino acid transport and metabolism [E] 0.68
COG1271Cytochrome bd-type quinol oxidase, subunit 1Energy production and conversion [C] 0.68
COG1289Uncharacterized membrane protein YccCFunction unknown [S] 0.68
COG1294Cytochrome bd-type quinol oxidase, subunit 2Energy production and conversion [C] 0.68
COG3169Uncharacterized membrane protein, DMT/DUF486 familyFunction unknown [S] 0.68

 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms96.58 %
UnclassifiedrootN/A3.42 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000364|INPhiseqgaiiFebDRAFT_105463392All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → Methylobacter → Methylobacter tundripaludum988Open in IMG/M
3300000956|JGI10216J12902_112718063All Organisms → cellular organisms → Bacteria695Open in IMG/M
3300002560|JGI25383J37093_10042750All Organisms → cellular organisms → Bacteria1488Open in IMG/M
3300005171|Ga0066677_10321457All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium886Open in IMG/M
3300005174|Ga0066680_10423966All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium843Open in IMG/M
3300005175|Ga0066673_10020402All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria3040Open in IMG/M
3300005179|Ga0066684_10882711All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Lachnospiraceae → Anaerostipes → Anaerostipes caccae585Open in IMG/M
3300005180|Ga0066685_10162786All Organisms → cellular organisms → Bacteria1521Open in IMG/M
3300005180|Ga0066685_11018121All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium546Open in IMG/M
3300005184|Ga0066671_10298763All Organisms → cellular organisms → Bacteria1009Open in IMG/M
3300005186|Ga0066676_10111492All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1675Open in IMG/M
3300005187|Ga0066675_10448367All Organisms → cellular organisms → Bacteria959Open in IMG/M
3300005293|Ga0065715_10999610All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium543Open in IMG/M
3300005332|Ga0066388_100130727All Organisms → cellular organisms → Bacteria3055Open in IMG/M
3300005440|Ga0070705_100115863All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1721Open in IMG/M
3300005444|Ga0070694_101923988All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium505Open in IMG/M
3300005445|Ga0070708_100153498All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium2143Open in IMG/M
3300005445|Ga0070708_100342719All Organisms → cellular organisms → Bacteria → Proteobacteria1408Open in IMG/M
3300005445|Ga0070708_100947597All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae808Open in IMG/M
3300005445|Ga0070708_101349911All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium665Open in IMG/M
3300005446|Ga0066686_10063772All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium2288Open in IMG/M
3300005446|Ga0066686_10403479All Organisms → cellular organisms → Bacteria934Open in IMG/M
3300005454|Ga0066687_10378626All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium815Open in IMG/M
3300005454|Ga0066687_10448922All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium755Open in IMG/M
3300005467|Ga0070706_101001603All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium770Open in IMG/M
3300005468|Ga0070707_100236662All Organisms → cellular organisms → Bacteria1777Open in IMG/M
3300005471|Ga0070698_100548447All Organisms → cellular organisms → Bacteria1095Open in IMG/M
3300005518|Ga0070699_100003829All Organisms → cellular organisms → Bacteria → Proteobacteria13294Open in IMG/M
3300005518|Ga0070699_100286003All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria1477Open in IMG/M
3300005518|Ga0070699_100623650All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium984Open in IMG/M
3300005518|Ga0070699_101112813All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium724Open in IMG/M
3300005536|Ga0070697_100662619Not Available919Open in IMG/M
3300005536|Ga0070697_100725675All Organisms → cellular organisms → Bacteria877Open in IMG/M
3300005545|Ga0070695_100214774Not Available1383Open in IMG/M
3300005558|Ga0066698_10638653All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium712Open in IMG/M
3300005568|Ga0066703_10122937All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1545Open in IMG/M
3300005569|Ga0066705_10497159All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium764Open in IMG/M
3300005586|Ga0066691_10374753All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium844Open in IMG/M
3300006031|Ga0066651_10081196All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1594Open in IMG/M
3300006049|Ga0075417_10031532All Organisms → cellular organisms → Bacteria2198Open in IMG/M
3300006049|Ga0075417_10038804All Organisms → cellular organisms → Bacteria2012Open in IMG/M
3300006049|Ga0075417_10665987Not Available533Open in IMG/M
3300006173|Ga0070716_101061789All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium644Open in IMG/M
3300006755|Ga0079222_11225367All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium675Open in IMG/M
3300006800|Ga0066660_11431704All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium542Open in IMG/M
3300006844|Ga0075428_100003717All Organisms → cellular organisms → Bacteria → Proteobacteria16722Open in IMG/M
3300006844|Ga0075428_100010424All Organisms → cellular organisms → Bacteria → Proteobacteria10321Open in IMG/M
3300006845|Ga0075421_100022208All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium7992Open in IMG/M
3300006846|Ga0075430_100048688All Organisms → cellular organisms → Bacteria → Proteobacteria3579Open in IMG/M
3300006846|Ga0075430_100165203All Organisms → cellular organisms → Bacteria1842Open in IMG/M
3300006847|Ga0075431_100034218All Organisms → cellular organisms → Bacteria5235Open in IMG/M
3300006847|Ga0075431_100178536All Organisms → cellular organisms → Bacteria2179Open in IMG/M
3300006854|Ga0075425_101607597All Organisms → cellular organisms → Bacteria732Open in IMG/M
3300006871|Ga0075434_100651489All Organisms → cellular organisms → Bacteria1071Open in IMG/M
3300006880|Ga0075429_100020056All Organisms → cellular organisms → Bacteria5796Open in IMG/M
3300006904|Ga0075424_101250001All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium790Open in IMG/M
3300007255|Ga0099791_10072832All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1559Open in IMG/M
3300007265|Ga0099794_10401720All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium716Open in IMG/M
3300007265|Ga0099794_10701879All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium539Open in IMG/M
3300009012|Ga0066710_100218124All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae2733Open in IMG/M
3300009012|Ga0066710_101072240All Organisms → cellular organisms → Bacteria1245Open in IMG/M
3300009012|Ga0066710_104891224All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium501Open in IMG/M
3300009090|Ga0099827_11570864All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium573Open in IMG/M
3300009094|Ga0111539_10777124All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1115Open in IMG/M
3300009137|Ga0066709_100996341All Organisms → cellular organisms → Bacteria1227Open in IMG/M
3300009147|Ga0114129_10160694All Organisms → cellular organisms → Bacteria3069Open in IMG/M
3300009156|Ga0111538_13730869Not Available527Open in IMG/M
3300009162|Ga0075423_10046063All Organisms → cellular organisms → Bacteria4481Open in IMG/M
3300009162|Ga0075423_11173740All Organisms → cellular organisms → Bacteria819Open in IMG/M
3300010043|Ga0126380_11270315All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium639Open in IMG/M
3300010084|Ga0127461_1034770All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium575Open in IMG/M
3300010133|Ga0127459_1100946All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium560Open in IMG/M
3300010140|Ga0127456_1071346All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium610Open in IMG/M
3300010141|Ga0127499_1101751All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium568Open in IMG/M
3300010303|Ga0134082_10172259All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium880Open in IMG/M
3300011269|Ga0137392_10507563All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1002Open in IMG/M
3300012200|Ga0137382_10493541All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium869Open in IMG/M
3300012202|Ga0137363_11545446All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium555Open in IMG/M
3300012203|Ga0137399_10018628All Organisms → cellular organisms → Bacteria4479Open in IMG/M
3300012203|Ga0137399_10324616All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1275Open in IMG/M
3300012203|Ga0137399_11476551All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium567Open in IMG/M
3300012205|Ga0137362_11340054All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium601Open in IMG/M
3300012208|Ga0137376_11077199All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium687Open in IMG/M
3300012397|Ga0134056_1096464All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium736Open in IMG/M
3300012399|Ga0134061_1325021All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium604Open in IMG/M
3300012582|Ga0137358_10116981All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1810Open in IMG/M
3300012582|Ga0137358_10838478All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium608Open in IMG/M
3300012918|Ga0137396_10003014All Organisms → cellular organisms → Bacteria9395Open in IMG/M
3300012918|Ga0137396_10210544All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1430Open in IMG/M
3300012918|Ga0137396_10268409All Organisms → cellular organisms → Bacteria → Acidobacteria1260Open in IMG/M
3300012918|Ga0137396_10545758All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium859Open in IMG/M
3300012922|Ga0137394_10111817All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium2307Open in IMG/M
3300012922|Ga0137394_10211124All Organisms → cellular organisms → Bacteria1659Open in IMG/M
3300012922|Ga0137394_10463730All Organisms → cellular organisms → Bacteria1077Open in IMG/M
3300012922|Ga0137394_10720180All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium839Open in IMG/M
3300012925|Ga0137419_10480663All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium983Open in IMG/M
3300012927|Ga0137416_11280973All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium662Open in IMG/M
3300012929|Ga0137404_10004393All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae9408Open in IMG/M
3300012929|Ga0137404_10052398All Organisms → cellular organisms → Bacteria3134Open in IMG/M
3300012930|Ga0137407_10031327All Organisms → cellular organisms → Bacteria4148Open in IMG/M
3300012930|Ga0137407_10182611All Organisms → cellular organisms → Bacteria1873Open in IMG/M
3300012930|Ga0137407_11017821All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium785Open in IMG/M
3300012944|Ga0137410_10971248All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium722Open in IMG/M
3300012972|Ga0134077_10065218All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1365Open in IMG/M
3300012977|Ga0134087_10199958All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium894Open in IMG/M
3300015356|Ga0134073_10409070All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium513Open in IMG/M
3300015373|Ga0132257_102850686All Organisms → cellular organisms → Bacteria630Open in IMG/M
3300017656|Ga0134112_10286697All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium659Open in IMG/M
3300017659|Ga0134083_10016688All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium2543Open in IMG/M
3300018431|Ga0066655_10348183All Organisms → cellular organisms → Bacteria972Open in IMG/M
3300018433|Ga0066667_10355414All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1167Open in IMG/M
3300018433|Ga0066667_10422121All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria1083Open in IMG/M
3300018468|Ga0066662_10627493All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1011Open in IMG/M
3300018468|Ga0066662_10843441All Organisms → cellular organisms → Bacteria894Open in IMG/M
3300018482|Ga0066669_10170091All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1630Open in IMG/M
3300019789|Ga0137408_1444335All Organisms → cellular organisms → Bacteria2665Open in IMG/M
3300020170|Ga0179594_10036577All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1598Open in IMG/M
3300020170|Ga0179594_10052248All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1382Open in IMG/M
3300020170|Ga0179594_10297912All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium611Open in IMG/M
3300020199|Ga0179592_10466998All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium544Open in IMG/M
3300021151|Ga0179584_1153028All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium552Open in IMG/M
3300024330|Ga0137417_1048903All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1350Open in IMG/M
3300025910|Ga0207684_10005752All Organisms → cellular organisms → Bacteria11385Open in IMG/M
3300025910|Ga0207684_10019550All Organisms → cellular organisms → Bacteria → Proteobacteria5793Open in IMG/M
3300025910|Ga0207684_10788683All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium804Open in IMG/M
3300025910|Ga0207684_11674306Not Available513Open in IMG/M
3300025922|Ga0207646_10031498All Organisms → cellular organisms → Bacteria4800Open in IMG/M
3300025922|Ga0207646_10335347All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria1366Open in IMG/M
3300025939|Ga0207665_11233079All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium597Open in IMG/M
3300026298|Ga0209236_1041329All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae2372Open in IMG/M
3300026300|Ga0209027_1064056All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1370Open in IMG/M
3300026309|Ga0209055_1040569All Organisms → cellular organisms → Bacteria2059Open in IMG/M
3300026313|Ga0209761_1066658All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1931Open in IMG/M
3300026326|Ga0209801_1204534All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium787Open in IMG/M
3300026327|Ga0209266_1183314All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium788Open in IMG/M
3300026333|Ga0209158_1243757All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium616Open in IMG/M
3300026529|Ga0209806_1113720All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1118Open in IMG/M
3300026551|Ga0209648_10037665All Organisms → cellular organisms → Bacteria4196Open in IMG/M
3300027873|Ga0209814_10005687All Organisms → cellular organisms → Bacteria4761Open in IMG/M
3300027880|Ga0209481_10144278All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1173Open in IMG/M
3300027909|Ga0209382_10002090All Organisms → cellular organisms → Bacteria → Proteobacteria29942Open in IMG/M
3300027909|Ga0209382_10701825All Organisms → cellular organisms → Bacteria1088Open in IMG/M
3300027909|Ga0209382_12062722All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium545Open in IMG/M
3300028536|Ga0137415_10014666All Organisms → cellular organisms → Bacteria7775Open in IMG/M
3300032770|Ga0335085_10906533All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium960Open in IMG/M
3300032782|Ga0335082_10014690All Organisms → cellular organisms → Bacteria8487Open in IMG/M


 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil26.03%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil16.44%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere16.44%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere16.44%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil10.27%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil8.22%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil1.37%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil1.37%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil0.68%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil0.68%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil0.68%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere0.68%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere0.68%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000364Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
3300000956Soil microbial communities from Great Prairies - Kansas, Native Prairie soilEnvironmentalOpen in IMG/M
3300002560Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cmEnvironmentalOpen in IMG/M
3300005171Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126EnvironmentalOpen in IMG/M
3300005174Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129EnvironmentalOpen in IMG/M
3300005175Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122EnvironmentalOpen in IMG/M
3300005179Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133EnvironmentalOpen in IMG/M
3300005180Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134EnvironmentalOpen in IMG/M
3300005184Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120EnvironmentalOpen in IMG/M
3300005186Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125EnvironmentalOpen in IMG/M
3300005187Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124EnvironmentalOpen in IMG/M
3300005293Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1Host-AssociatedOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005440Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaGEnvironmentalOpen in IMG/M
3300005444Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaGEnvironmentalOpen in IMG/M
3300005445Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaGEnvironmentalOpen in IMG/M
3300005446Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135EnvironmentalOpen in IMG/M
3300005454Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136EnvironmentalOpen in IMG/M
3300005467Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaGEnvironmentalOpen in IMG/M
3300005468Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaGEnvironmentalOpen in IMG/M
3300005471Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaGEnvironmentalOpen in IMG/M
3300005518Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaGEnvironmentalOpen in IMG/M
3300005536Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaGEnvironmentalOpen in IMG/M
3300005545Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaGEnvironmentalOpen in IMG/M
3300005558Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147EnvironmentalOpen in IMG/M
3300005568Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152EnvironmentalOpen in IMG/M
3300005569Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154EnvironmentalOpen in IMG/M
3300005586Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140EnvironmentalOpen in IMG/M
3300006031Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100EnvironmentalOpen in IMG/M
3300006049Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1Host-AssociatedOpen in IMG/M
3300006173Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaGEnvironmentalOpen in IMG/M
3300006755Agricultural soil microbial communities from Georgia to study Nitrogen management - GA PlitterEnvironmentalOpen in IMG/M
3300006800Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109EnvironmentalOpen in IMG/M
3300006844Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2Host-AssociatedOpen in IMG/M
3300006845Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5Host-AssociatedOpen in IMG/M
3300006846Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4Host-AssociatedOpen in IMG/M
3300006847Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5Host-AssociatedOpen in IMG/M
3300006854Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4Host-AssociatedOpen in IMG/M
3300006871Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3Host-AssociatedOpen in IMG/M
3300006880Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3Host-AssociatedOpen in IMG/M
3300006904Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3Host-AssociatedOpen in IMG/M
3300007255Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1EnvironmentalOpen in IMG/M
3300007265Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1EnvironmentalOpen in IMG/M
3300009012Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159EnvironmentalOpen in IMG/M
3300009090Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaGEnvironmentalOpen in IMG/M
3300009094Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009137Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158EnvironmentalOpen in IMG/M
3300009147Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)Host-AssociatedOpen in IMG/M
3300009156Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009162Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2Host-AssociatedOpen in IMG/M
3300010043Tropical forest soil microbial communities from Panama - MetaG Plot_26EnvironmentalOpen in IMG/M
3300010084Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_5_24_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010133Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_5_8_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010140Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_5_24_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010141Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_5_8_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010303Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015EnvironmentalOpen in IMG/M
3300011269Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaGEnvironmentalOpen in IMG/M
3300012200Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaGEnvironmentalOpen in IMG/M
3300012202Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaGEnvironmentalOpen in IMG/M
3300012203Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaGEnvironmentalOpen in IMG/M
3300012205Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaGEnvironmentalOpen in IMG/M
3300012208Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012397Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_24_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012399Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_24_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012582Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaGEnvironmentalOpen in IMG/M
3300012918Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaGEnvironmentalOpen in IMG/M
3300012922Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaGEnvironmentalOpen in IMG/M
3300012925Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012927Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012929Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012930Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012944Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012972Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300012977Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300015356Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300015373Combined assembly of cpr5 rhizosphereHost-AssociatedOpen in IMG/M
3300017656Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_11112015EnvironmentalOpen in IMG/M
3300017659Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300018431Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104EnvironmentalOpen in IMG/M
3300018433Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116EnvironmentalOpen in IMG/M
3300018468Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111EnvironmentalOpen in IMG/M
3300018482Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118EnvironmentalOpen in IMG/M
3300019789Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300020170Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_1_08_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300020199Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300021151Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_06_16RNAfungal (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300024330Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300025910Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025922Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025939Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026298Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm (SPAdes)EnvironmentalOpen in IMG/M
3300026300Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300026309Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110 (SPAdes)EnvironmentalOpen in IMG/M
3300026313Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm (SPAdes)EnvironmentalOpen in IMG/M
3300026326Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127 (SPAdes)EnvironmentalOpen in IMG/M
3300026327Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132 (SPAdes)EnvironmentalOpen in IMG/M
3300026333Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140 (SPAdes)EnvironmentalOpen in IMG/M
3300026529Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152 (SPAdes)EnvironmentalOpen in IMG/M
3300026551Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)EnvironmentalOpen in IMG/M
3300027873Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)Host-AssociatedOpen in IMG/M
3300027880Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 (SPAdes)Host-AssociatedOpen in IMG/M
3300027909Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)Host-AssociatedOpen in IMG/M
3300028536Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300032770Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5EnvironmentalOpen in IMG/M
3300032782Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap


 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
INPhiseqgaiiFebDRAFT_10546339223300000364SoilMNPRILRMSVVALVALFAAACSSTGGTSRISMANLCKKTGGNYVNGTCEPAPSAQTAAQLCANHGGVYMAGGDYCEVDNGMFWKQ*
JGI10216J12902_11271806313300000956SoilMNPRILRMSVVALVALSAAACSSTGGTSRISMANLCKKTGGNYVNGTCEPAPSAQTAAQLCANHGGVYMAGGDYCEVDNGMFWKQ*
JGI25383J37093_1004275023300002560Grasslands SoilMDQRLKFRRISLVVLLALVPAACSSTGPSRLSIGSLCKASGGTYAAGSCQPASNPQTAAQLCAGHGGVYVEGGDYCEVANSMFWKP*
Ga0066677_1032145723300005171SoilMDQRSKFLGISLVALLGLVSAACSSTGTSRISMSSICKATGGTYANGTCNPAPNPQTAAQLCAAHGGVYTEGGDYCEVANNMFWKP*
Ga0066680_1042396623300005174SoilMDQRFLKLSLVALVAVSAAACSSTGTSRISMGSLCQKGGGTYVNGTCQPSSNPQTAAQLCANHGGVYMAGGDYCEVDNSLFWKP*
Ga0066673_1002040213300005175SoilMDQRSKFLGISLVVLLGLVPAACSSTGTSRVSMSSICKATGGTYANGTCQPAPNPQTAAQLCAAHGGVYMEGGDYCEVANNMFWKP*
Ga0066684_1088271113300005179SoilMDQRFLKLTLVALVAVSAAACSSAGTSRISMGSLCQKGGGTYVNGTCQPSSNPQTAAQLCANHGGVYMAGGDYCEVNNSLFWKP*
Ga0066685_1016278613300005180SoilMDQRFLKLTLVALVAVSAAACSSTGTSRISMGSLCQKGGGTYVNGTCQPSSNPQTAAQLCANHGGVYMAGGDYCEVNNSLFWKP*
Ga0066685_1101812113300005180SoilMNPRILRMSVVALVALSAAACSSTGGTSRISMANLCKKTGGNYANGSCEPASNPQTAAQLCANHGGVYMAGGDYCEVDNSMFWKP*
Ga0066671_1029876313300005184SoilMDQRFLKLTLVALVAVSAAACSSAGTSRISMGSLCQKGGGTYVNGTCQPSSNPQTAAQLCANHGGVYMAGGDYCEVDNSLFWKP*
Ga0066676_1011149233300005186SoilMDQMKFGRISLVVLLALIPAACSSTGTGTHRFSMSSICKASGGTYSNGACQPASTPQTAAQVCAAHGGVYSPGGEYCEIDNSLLFKPLP*
Ga0066675_1044836723300005187SoilMDQRFLKLTLVALVAVSAAACSSTGTSRISMGSLCQKGGGTYVNGTCQPSSSPQTAAQLCANHGGVYMAGGD
Ga0065715_1099961023300005293Miscanthus RhizosphereMNPRILRMSVVALLALSAAACSSTGGTSRISMANLCKKTGGNYENGTCEPASNPQTAAQVCANHGGVYMAGGDYCEVDNSMFWKP*
Ga0066388_10013072713300005332Tropical Forest SoilMNLRILRMSVVALVALSAAACSSTGSTSRISMANLCKKTGGSYVNGTCEPAPSAQTAAQLCANHGGVYMAGGDYCEVDNGMFWKQ*
Ga0070705_10011586323300005440Corn, Switchgrass And Miscanthus RhizosphereMNPRILRMSVVALLALSAAACSSTGGTSRISMANLCKKTGGNYVNGTCEPASNPQTAAQVCANHGGVYMAGGDYCEVDNSMFWKP*
Ga0070694_10192398823300005444Corn, Switchgrass And Miscanthus RhizosphereKFQRIALVVLLALVTAACSSTGTGTRRVSMSSICKATGGTYSGNMCQPAPAAQDPAKLCAAHGGTYYPGGEYCEVDNSLLWKP*
Ga0070708_10015349823300005445Corn, Switchgrass And Miscanthus RhizosphereMDQRSKFARISLVVLLALVPAACSSTGTSRVSMSSICKATGGTYANGTCQPAPGPQTAAQLCANHGGVYMAGGDYCEVDNSLFWKP*
Ga0070708_10034271913300005445Corn, Switchgrass And Miscanthus RhizosphereMDQQPKFQRIALVVLLALVTAACSSTGTGTRRVSMSSICKATGGTYSGNMCQPAPSAQDPAKLCAAHG
Ga0070708_10094759733300005445Corn, Switchgrass And Miscanthus RhizosphereMNPRILRMSVVALVALSAAACSSTGGTSRISMANLCKKTGGNYANGSCEPAPNPQTAAQLCANHGGVYMAGGDYCEVDNSMFWKP*
Ga0070708_10134991123300005445Corn, Switchgrass And Miscanthus RhizosphereMDQQWKFGGISLVMCLALLTAACSSTGGTRRVSMSSICKATGGTYSGNMCQPAPSAQDPAKLCAAHGGVYYPGGEYCEVDNSLLWKP*
Ga0066686_1006377223300005446SoilMHQMKFGRISLVVLLALIPAACSSTGTGTHRFSMSSICKASGGTYSNGACQPASTPQNAAQVCAAHGGVYSPGGEYCEIDNSLLFKPLP*
Ga0066686_1040347923300005446SoilMDQRFLKLTLVALVAVSAAACSSTGTSRISMGSLCQKGGGTYVNGTCQPSSNPQTAAQLCANHGGVYMAGGDYCEVDNSLFWKP*
Ga0066687_1037862623300005454SoilMDQRFLKLTLVALVAVSAAACSSTGTSRISMGSLCQKGGGTYVNGTCQPSSSPQTAAQLCANHGGVYMAGGDYCEVDNSLFWKP*
Ga0066687_1044892213300005454SoilMDQRSKFLGISLVVLLGLVPAACSSTGTSRVSMSSICKATGGTYTDGTCQPASNPQTAAQLCAAHGGVYMAGGDYCEVANNMFWKP*
Ga0070706_10100160313300005467Corn, Switchgrass And Miscanthus RhizosphereMDQQWKFGGISLVMCLALLTAACSSTGGTRRVSMSSICKATGGTYSGNMCQPAPSAQDPAKLCAAHGGVYYPGGEYCEVDNSL
Ga0070707_10023666263300005468Corn, Switchgrass And Miscanthus RhizosphereMDQQPKFQRIALVVLLALVTAACSSTGTGTRRVSMSSICKATGGTYSGNMCQPAPSAQDPAKLCAAHGGVYYPGGEYCE
Ga0070698_10054844743300005471Corn, Switchgrass And Miscanthus RhizosphereMNPRILRMSVVALLALSAAACSSTGGTSRISMANLCKKTGGNYVNGTCEPASNPQTAAQVCANHGGVY
Ga0070699_10000382913300005518Corn, Switchgrass And Miscanthus RhizosphereMDQQPKFQRIALVVLLALVTAACSSTGTGTRRVSMSSICKATGGTYSGNMCQPAPSAQDPAKLCAAHGGVYY
Ga0070699_10028600313300005518Corn, Switchgrass And Miscanthus RhizosphereMDQQWKFGGISLVMCLALLTAACSSTGGTRRVSMSSICKATGGTYSGNMCQPAPSAQDPAKLCAAHGGVYY
Ga0070699_10062365023300005518Corn, Switchgrass And Miscanthus RhizosphereMDQRSKFARISLVVLLALVPAACSSTGTSRVSMSSICKATGGTYANSTCQPAPGPQTAAQLCANHGGVYMAGGDYCEVDNSLFWKP*
Ga0070699_10111281323300005518Corn, Switchgrass And Miscanthus RhizosphereMDQRSKFLGISLVVLLGLVSAACSSTGTSRVSMSSICKATGGTYANGTCNPAPNPQTAAQLCAAHGGVYMEGGDYCEVSNNMFWKP*
Ga0070697_10066261913300005536Corn, Switchgrass And Miscanthus RhizosphereMDQQPKFQRIALVVLLALVTAACSSTGTGTRRVSMSSICKATGGTYSGNMCQPAPSAQDPAKLCAAH
Ga0070697_10072567523300005536Corn, Switchgrass And Miscanthus RhizosphereMNPRILRMSVVALVALSAAACSSTGGTSRISMANLCKKTGGNYANGSCEPAPNPQTAAQLCANHGGVYMAGGEYCEVDNSMFWKP*
Ga0070695_10021477423300005545Corn, Switchgrass And Miscanthus RhizosphereLLTAACSSTGGTRRVSMSSICKATGGTYSGNMCQPAPAAQDPAKLCAAHGGVYYPGGEYCEVDNSLLWKP*
Ga0066698_1063865313300005558SoilMDQMKFGRISLVVLLALIPAACSSTGTGTHRFSMSSICKASGGTYSNGACQPASTPQNAAQVCAAHGGVYSPGGEYCEIDNSLLFKPLP*
Ga0066703_1012293733300005568SoilMDQRSKFLGISLVALLALVSAACSSTGTSRISMSSICKATGGTYANGTCNPAPNPQTAAQLCAAHGGVYTEGGDYCEVANNMFWKP*
Ga0066705_1049715913300005569SoilMDQRSKFLGMSLVVLLGLVPAACSSTGTSRVSMSSICKATGGTYSDGTCQPAPNPQTAAQLCAAHGGVYTAGGDYCEVDNSMFWKP*
Ga0066691_1037475323300005586SoilMDQQSKFLGISLVVLLGLVPAACSSTGTSRVSMSSICKATGGTYANGTCQPAPNPQTAAQLCAAHGGVYMEGGDYCEVANNMFWKP*
Ga0066651_1008119633300006031SoilMDQRSKFLGISLVVLLGLVPAACSSTGTSRVSMSSICKATGGTYANGTCNPAPNPQTAAQLCAAHGGVYMEGGDYCEVANNMFWKP*
Ga0075417_1003153233300006049Populus RhizosphereMNHRFLTVPLLALLGLSAAACASGTSRINMASLCKKTGGTYVDGSCQPASNPQTAAQLCANHGGTYVSGGDYCEVDNSLFWKP*
Ga0075417_1003880433300006049Populus RhizosphereMNPRILRMSVVALVAVSAAACSSTGGTSRISMANLCKKTGGSYVNGTCEPASKPQTAAQLCANHGGVYMAGGDYCEVDNGMFWKQ*
Ga0075417_1066598713300006049Populus RhizosphereMDSRTKFRSVLLVVLLSLVPLACSSSGTSRVKVSSMCEKSGGTYVGGTCQPASKPMTSAQLCSAHGGTYDRAADLCEVDNGLIWK*
Ga0070716_10106178913300006173Corn, Switchgrass And Miscanthus RhizosphereMNPRILRMSVVALVALSAAACSSTGGTSRISMANLCKKTGGNYVNGTCEPASNPQTAAQVCANHGGVYMAGGDYCEVDNSMFWKP*
Ga0079222_1122536713300006755Agricultural SoilMNPRILRMSVVALVALSAAACSSTGSTSRISMANLCKKTGGSYVNGTCEPASKPQTAAQLCANHGGVYMAGGDYCEVDNGMFWKQ*
Ga0066660_1143170413300006800SoilMDQRSKFLGISLVVLLGLVPAACSSTGTSRVSMSSICKATGGTYANGTCQPAPNPQTAAQLCAAHGGVYTEGGDYCEVANNMFWKP*
Ga0075428_10000371753300006844Populus RhizosphereVNQPSKFWSILVVVLLALLPAACSSTGTSRLNVSSMCQRSGGTYAAGTCQPASNPMTAAQLCAAHGGVYVEGGDYCEVANSMFWKP*
Ga0075428_10001042483300006844Populus RhizosphereMNPRILRMSVVALVALAAAACSSTGGTSRISMANLCKKTGGSYVNGTCEPASNPQTAAQLCANHGGVYMAGGDYCEVDNGMFWKP*
Ga0075421_10002220813300006845Populus RhizosphereVVVLLALLPAACSSTGTSRLNVSSMCQRSGGTYAAGTCQPASNPMTAAQLCAAHGGVYVEGGDYCEVANSMFWKP*
Ga0075430_10004868853300006846Populus RhizosphereVNQPSKFWSILVVVLLALLPAACSSTGTSRLNVSSMCQRSGGTYAAGTCQPASNPMTAAQLCAAHGGVYVEGGD
Ga0075430_10016520343300006846Populus RhizosphereMDSRTKFRSALLVVLLSLVPLACSSSGTSRVKVSSMCEKSGGTYVGGTCQPASKPMTSAQLCSAHGGTYDRAADLCEV
Ga0075431_10003421843300006847Populus RhizosphereMDSRTKFRSALLVVLLSLVPLACSSSGTSRVKVSSMCEKSGGTYVGGTCQPASKPMTSAQLCSAHGGTYDRAADLCEVDNGLIWK*
Ga0075431_10017853633300006847Populus RhizosphereMNPRILRMSVVALVALSAAACSSTGGTSRISMANLCKKTGGNYVNGTCEPAPSPQTAAQLCANHGGVYMAGGDYCEVDNGMFWKQ*
Ga0075425_10160759733300006854Populus RhizosphereMNPRILRMSVVALVAVSAAACSSTGGTSRISMANLCKKTGGSYVNGTCEPASKPQTAAQLCANHG
Ga0075434_10065148923300006871Populus RhizosphereMNPRILKMSVVALVALSAAACSSTGGTSRISMANLCKKTGGNYVNGTCEPAPSPQTAAQLCANHGGVYMAGGDYCEVDNGMFWKQ*
Ga0075429_10002005623300006880Populus RhizosphereMNHRFLTIPLLALLGLSAAACASGTSRINMASLCKKTGGTYVDGSCQPASNPQTAAQLCANHGGTYVSGGDYCEVDNSLFWKP*
Ga0075424_10125000123300006904Populus RhizosphereMSWRSKVSRITIVALLALVPAACTSTGTSRISMSSLCQKTGGTYAGGTCQPASNPQAAAQLCAAHGGVYMPGGDYCEVENSMFWKP*
Ga0099791_1007283213300007255Vadose Zone SoilMDQRSKFLGISLVVLLGLVPAACSSTGTSRVSMSSICKATGGTYADGTCQPAPSPQTSAQLCAAHGGVYMAGGDYCEVANNMFWKP*
Ga0099794_1040172013300007265Vadose Zone SoilMNPRILRMSVVALVALSAAACSSTGGTSRISMANLCKKTGGNYANGSCEAAPNPQTAGQLCANHGGVYMAGGDYCEVDNSMFWKP*
Ga0099794_1070187923300007265Vadose Zone SoilMDQRSKFLGISLVVLLGLVPAACSSTGTSRVSMSSICKATGGTYSDGTCQPAPNPQTAAQLCAAHGGVYMEGGDYCEVANNMFWKP*
Ga0066710_10021812433300009012Grasslands SoilMNPRILRMSVVALVALSAAACSSTGGTSRISMANLCKKTGGNYANGSCEPASNPQTAAQLCANHGGVYMAGGDYCEVDNSMFWKP
Ga0066710_10107224023300009012Grasslands SoilMDQRFLKLTLVALVAVSAAACSSTGTSRISMGSLCQKGGGTYVNGTCQPSSNPQTAAQLCANHGGVYMAGGDYCEVDNSLFWKP
Ga0066710_10489122423300009012Grasslands SoilMDQQFLKLSLVALVAVSAAACSSTGTSRISMGSLCQKGGGTYVNGTCQPSSNPQTAAQLCANHGGVYMAGGDYCEVDN
Ga0099827_1157086413300009090Vadose Zone SoilMDQQSKFLGISLVVLLGLVPAACSSTGTSRVSMSSICKATGGTYSNGTCQPAPNPQTAAQLCAAHGGVYMEG
Ga0111539_1077712433300009094Populus RhizosphereMDSRTKFRSALLVVLLSLVPLACSSSGTSRVKVSSMCEKSGGTYVGGTCQPASNPQTAAQLCSNHGGVYMAGGDYCEVDNSLFWKP*
Ga0066709_10099634143300009137Grasslands SoilMDQQFLKLSLVALVAVSAAACSSTGTSRISMGSLCQKGGGTYVNGTCQPSSNPQTAAQLCANHGGVYMAGGDYCEVDNSLFWKP*
Ga0114129_1016069423300009147Populus RhizosphereMNQRFLRISLLALLAVSAAACSSTGTSRISMTSLCQKSGGTYVNGTCQPASNPQTAAQLCSNHGGVYMAGGDYCEVDNSLFWKP*
Ga0111538_1373086913300009156Populus RhizosphereMDSRTKFRSVLLVILLSLVPLACSSSGTSRVKVSSMCEKSGGTYVGGTCQPASKPMTSAQLCSAHGGTYDRAADLCEVDNGLIWK*
Ga0075423_1004606353300009162Populus RhizosphereMNHRFLTIPLLALLGLSAAACASGTSRINMASLCKKTGGTYVDGSCQPASNPQTAAQLCANHGGTYVSGGDYCEVANSLFWKP*
Ga0075423_1117374013300009162Populus RhizosphereMDSRTKFRSVLLVVLLSLVPLACSSSGTSRVKVSSMCEKSGGTYVGGTCQPASKPMTSAQLCSAHGGTYDRAADLCEVDNGLI
Ga0126380_1127031523300010043Tropical Forest SoilMSWRSKVSRITIVALLALVPAACSSTGTSRISMSSLCQKSGGTYAAGSCQPASNPQTAAQLCANHGGVYMEGGDYCEVSNSMFWKP*
Ga0127461_103477013300010084Grasslands SoilMEERMHQMKFGRISLVVLLALIPAACSSTGTGTHRFSMSSICKASGGTYSNGACQPASTPQNAAQVCAAHGGVYSPGGEYCEIDNSLLFKPLP*
Ga0127459_110094623300010133Grasslands SoilLTSMEERMHQMKFGRISLVVLLALIPAACSSTGTGTHRFSMSSICKASGGTYSNGACQPASTPQNAAQVCAAHGGVYSPGGEYCEIDNSLLFKPLP*
Ga0127456_107134623300010140Grasslands SoilMEERMDQMKFGRISLVVLLALLPAACSSTGTGTHRFSMSSICKASGGTYSNGACQPASTPQNAAQVCAAHGGVYSPGGEYCEIDNSLLFKPLP*
Ga0127499_110175113300010141Grasslands SoilMNPRILRTSVVALLALSAAACSSTGGTSRISMANLCKKTGGNYVNGTCEPAPNPQTAAQLCANHGGVYMAGGDYCEVDNGMFWKP*
Ga0134082_1017225913300010303Grasslands SoilMDQLKFRRISLVVLLALLPAACSSTGTSRVSMSSICKATGGTYANGTCQPAPNPQTAAQLCAAHGGVYMEGGDYCEVANNMFWKP*
Ga0137392_1050756313300011269Vadose Zone SoilHPKSHQLEGRMDQRSKFLGISLVALLGLVSAACSSTGTSRISMSSICKATGGTYANGTCNPAPNPQTAAQLCAAHGGVYMEGGDYCEVANNMFWKP*
Ga0137382_1049354123300012200Vadose Zone SoilMDQRSKFLGISLVALLGLVSAACSSTGTSRVSMSSICKATGGTYANGTCQPAPNPQTAAQLCAAHGGVYMEGGDYCEVANNMFWKP*
Ga0137363_1154544613300012202Vadose Zone SoilMDQRSKFLGISLVALLGLVSAACSSTGTSRISMSSICKATGGTYANGTCNPAPNPQTAAQLCAAHGGVYMEGGDYCEVANNMFWKP*
Ga0137399_1001862843300012203Vadose Zone SoilMDQQSKFRRISLVVLLALLTAACSSTGTRRVSMSSICKATGGTYSGGTCQPASTPQNAAQLCAAHGGVYMAGGDYCEVDNSLLWKP*
Ga0137399_1032461633300012203Vadose Zone SoilMDQQSKFLGISLVVLLGLVPAACSSTGTSRLSMSSICKATGGTYSNGTCQPAPNPQTAAQLCAAHGGVYMEGGDYCEVANNMFWKP*
Ga0137399_1147655123300012203Vadose Zone SoilSKFLGISLVALLGLVSAACSSTGTSRISMSSICKATGGTYANGTCNPAPNPQTAAQLCAAHGGVYMEGGDYCEVANNMFWKP*
Ga0137362_1134005413300012205Vadose Zone SoilTADSSSLHPKSHQLEGRMDQRSKFLGISLVVLLGLVSAACSSTGTSRVSMSSICKATGGTYANGTCNPAPNPQTAAQLCAAHGGVYMEGGDYCEVANNMFWKP*
Ga0137376_1107719913300012208Vadose Zone SoilMDQRSKFLGISLVALLGLVSAACSSTGTSRISMSSICKATGGTYANGTCNPAPNPQTAAQLCAAHGGVYTEGGDYCEVANNM
Ga0134056_109646413300012397Grasslands SoilMNPRILRTSVVALLAQSAAACSSTGGTSRISMANLCKKTGGNYVNGTCEPAPNPQTAAQLCANHGGVYMAGGDYCEVDNGMFWKP*
Ga0134061_132502123300012399Grasslands SoilMSVVALLALSAAACSSTGGTSRISMANLCKKTGGNYVNGTCEPAPNPQTAAQLCANHGGVYMAGGDYCEVDNGMFWKP*
Ga0137358_1011698143300012582Vadose Zone SoilMDQQSKFLGISLVVLLGLVPAACSSTGTSRVSMSSICKATGGTYSNGTCQPAPNPQTAAQLCAAHGGVYMEGGDYCEVANNMFWKP*
Ga0137358_1083847823300012582Vadose Zone SoilMDQRSKFLGISLVALLGLVSAACSSTGTSRISMSSICKATGGTYANGTCNPAPNPQTSAQLCAAHGGVYMEGGDYCEVANNMFWKP*
Ga0137396_10003014113300012918Vadose Zone SoilMDQQSKFRRISLVVLLALLTAACSSTDTRRVSMSSICKATGGTYSGGTCQPASTPQNAAQLCAAHGGVYMAGGDYCEVDNSLLWKP*
Ga0137396_1021054423300012918Vadose Zone SoilMDQRSKFLGISLVVLLGLVSAACSSTGTSRVSMSSICKATGGTYADGTCQPAPSPQTSAQLCAAHGGVYMAGGDYCEVANNMFWKP*
Ga0137396_1026840923300012918Vadose Zone SoilMDQRLKFRRISLVVLLALLPAACSSTGPSRLSIGSLCKASGGTYAAGSCQPASNPQTAAQLCAGHGGVYVAGGDYCEVGNSMFWKP*
Ga0137396_1054575823300012918Vadose Zone SoilMDHRSKFLGISLVVLLGLVPAACSSTGTSRVSMSSICKATGGTYSNGTCQPAPNPQTSAQLCAAHGGVYMAGGDYCEVANNMFWKP*
Ga0137394_1011181733300012922Vadose Zone SoilMNPRILRMSVVALVALSAAACSSTGGTSRISMANLCKKTGGNYANGSCEAASNPQTAGQLCANHGGVYMAGGDYCEVDNSMFWKP*
Ga0137394_1021112443300012922Vadose Zone SoilMSVVALLALSAAACSSTGGTSRISMANLCKKTGGNYVNGTCEPASNPQTAAQLCANHGGVYMAGGDYCEVDNGMFWKP*
Ga0137394_1046373023300012922Vadose Zone SoilMDQRSKFLGISLVALLGLVSAACSSTGSSRISMSSICKATGGTYANGTCNPAPNPQTAAQLCAAHGGVYMEGGDYCEVANNMFWKP*
Ga0137394_1072018013300012922Vadose Zone SoilMGQQSKFLGISLVVLLGLVPAACSSSGTSRVSMSSMCKAAGGTYADGTCQPASNPQTAAQLCAAHGGVYMAGGDYCEVDNSMFWKP*
Ga0137419_1048066313300012925Vadose Zone SoilMDQRSKFLGISLVVLLGLVPAACSSTGTSRVSMSSICKATGGTYSNGTCQPAPNPQTAAQLCAAHGGVYMEGGDYCEVANNMFWKP*
Ga0137416_1128097313300012927Vadose Zone SoilMDQRSKFLGISLVVLLGLVPAACSSTGTSRVSMSSICKATGGTYADGTCQPAPSPQTSAQLCAAHGGVYMAGGDYCEVANNMF
Ga0137404_1000439353300012929Vadose Zone SoilMDQQLKFRRISLVVLLALLPAACSSTGTSRLSMSSLCKASGGTYMAGSCQPASNPQTAAQLCAGHGGVYVAGGDYCEVGNSMFWKP*
Ga0137404_1005239853300012929Vadose Zone SoilMNPRILRMSVVALVALSAAACSSTGGTSRISMASLCQKTGGNYANGSPHPASNPQTAAQLCANHGGVYMAGGDYCEVDNS
Ga0137407_1003132753300012930Vadose Zone SoilMEERMDQMKFGRISLVVLLALIPAACSSTGTGTHRFSMSSICKASGGTYSNGACQPASTPQNAAQVCAAHGGVYSPGGEYCEIDNSLLFKPLP*
Ga0137407_1018261123300012930Vadose Zone SoilMNPRILRMSVVALLALSAAACSSTGGTSRISMANLCKKTGGNYVNGTCEPAPNPQTAAQLCANHGGVYMAGGDYCEVDNGMFWKP*
Ga0137407_1101782113300012930Vadose Zone SoilMDQRFLKLTLVALVAVSAAACSSTGTSRISMGSLCQKGGGTYVNGTCQPSSNPQTSAQLCANHGGVY
Ga0137410_1097124813300012944Vadose Zone SoilMDQRSKFLGISLVALLGLVSAACSSTGSSRISMSSICKATGGTYANGTCNPAPNPQTAAQLCAAHGGVYMEGGDYCEV
Ga0134077_1006521823300012972Grasslands SoilMHQMKFGRISLVVLLALIPAACSSTGTGTHRFSMSSICKASGGTYSNGACQPASTPQNAAQVCAAHGGVYSLGGEYCEIDNSLLFKPLP*
Ga0134087_1019995823300012977Grasslands SoilMDQRFLKLTLVALVAVSAAACSSAGTSRISMGSLCQKGGGTYVNGTCQPSSNPQTAAQLCANHGGVY
Ga0134073_1040907013300015356Grasslands SoilMDQRSKFLGISLVALLGLVSAACSSTGTSRISMSSICKATGGTYANGTCQPAPNPQTAAQLCAAHGGVYMEGGDYCEVANNMFWKP*
Ga0132257_10285068623300015373Arabidopsis RhizosphereMNPRILRMSVVALVAVSAAACSSTGGTSRISMANLCKKTGGSYVNGTCEPASKPQTAAQLCSNHGGVYMAGGDYCEVDNGMFWKQ*
Ga0134112_1028669723300017656Grasslands SoilMNPQILRMSVVALLALSAAACSSTGGTSRISMANLCKKTGGNYVNGTCEPAPNPQTAAQLCANHGGVYMAGGDYCEVDNSMFWKP
Ga0134083_1001668843300017659Grasslands SoilMHQMKFGRISLVVLLALIPAACSSTGTGTHRFSMSSICKASGGTYSNGACQPASTPQNAAQVCAAHGGVYSLGGEYCEIDNSLLFKPLP
Ga0066655_1034818313300018431Grasslands SoilMDQRSKFLGISLVVLLGLVPAACSSTGTSRVSMSSICKATGGTYANGTCQPAPNPQTAAQLCAAHGGVYMEGGDYCEV
Ga0066667_1035541423300018433Grasslands SoilMDQRSKFLGISLVVLLGLVPAACSSTGTSRVSMSSICKATGGTYANGTCQPAPNPQTAAQLCAAHGGVYMEGGDYCEVANNMFWKP
Ga0066667_1042212133300018433Grasslands SoilMDQLKFRRISLVVLLALLPAACSSTGTGSHRIGMSSMCKASGGTYSGGACQPASNPQNAAQLCAAHGGVYSPGG
Ga0066662_1062749323300018468Grasslands SoilMDQRLKFRRISLVVLLALVPAACSSTGPSRLSIGSLCKASGGTYAAGSCQPASNPQTAAQLCAGHGGVYVEGGDYCEVANSMFWKP
Ga0066662_1084344133300018468Grasslands SoilMDQRFLKLSLVALVAVSAAACSSTGTSRISMGSLCQKGGGTYVNGTCQPSSNPQTAAQLCANHGGVYMAGGDYCEVDNSLFWKP
Ga0066669_1017009133300018482Grasslands SoilMDQRSKFLGMSLVVLLGLVPAACSSTGTSRVSMSSICKATGGTYSDGTCQPAPNPQTAAQLCAAHGGVYTAGGDYCEVDNSMFWKP
Ga0137408_144433553300019789Vadose Zone SoilMNPRILRTSVVALLALSAAACSSTGGTSRISMANLCKKTGGNYVNGTCEPAPNPQTAAQLCANHGGVYMAGGDYCEVDNGMFWKP
Ga0179594_1003657723300020170Vadose Zone SoilMNPRILRMSVMALLALSAAACSSTGGTSRISMANLCKKTGGNYVNGTCEPAPNPQTAAQLCANHGGVYMAGGDYCEVDNGMFWKP
Ga0179594_1005224823300020170Vadose Zone SoilMDQMKFGRISLVVLLALIPAACSSTGTGTHRFSMSSICKASGGTYSNGACQPASTPQNAAQVCAAHGGVYSPGGEYCEIDNSLLFKPLP
Ga0179594_1029791213300020170Vadose Zone SoilMDQRSKFLGISLVVLLGLVSAACSSTGTSRVSMSSICKATGGTYADGTCQPAPSPQTSAQLCAAHGGVYMAGGDYCEVANNMFWKP
Ga0179592_1046699813300020199Vadose Zone SoilMDQRSKFLGISLVVLLGLVPAACSSTGTSRVSMSSICKATGGTYADGTCQPAPSPQTSAQLCAAHGGVYMAGGDYCEVANNMFWKP
Ga0179584_115302823300021151Vadose Zone SoilMDQQSKFLGISLVVLLGLVPAACSSTGTSRVSMSSICKATGGTYSNGTCQPAPNPQTAAQLCAAHGGVYMEGGDYCEVANNMFWKP
Ga0137417_104890323300024330Vadose Zone SoilMDQQSKFRRISLVVLLALLTAACSSTGTRRVSMSSICKATGGTYSGGTCQPASTPQNAAQLCAAHGGVYMAGGDYCEVDNSLLWKP
Ga0207684_1000575253300025910Corn, Switchgrass And Miscanthus RhizosphereMNPRILRMSVVALLALSAAACSSTGGTSRISMANLCKKTGGNYVNGTCEPASNPQTAAQVCANHGGVYMAGGDYCEVDNSMFWKP
Ga0207684_1001955043300025910Corn, Switchgrass And Miscanthus RhizosphereMDQQPKLQRIALVVLLALVTAACSSTGTGTRRVSMSSICKATGGTYSGNMCQPAPSAQDPAKLCAAHGGVYYPGGEYCEVDNSLLWKP
Ga0207684_1078868313300025910Corn, Switchgrass And Miscanthus RhizosphereMDQRSKLWRISLVVLLALLPAACSSAGTSRVSVSSMCKASGGTYVDGACQPASNPQTAAQLCAAHGGVYMAGGDYCEVDNSLFWKP
Ga0207684_1167430623300025910Corn, Switchgrass And Miscanthus RhizosphereMDQQWKFGGISLVMCLALLTAACSSTGGTRRVSMSSICKATGGTYSGNMCQPAPSAQDPAKLCAAHGGVYYPG
Ga0207646_1003149843300025922Corn, Switchgrass And Miscanthus RhizosphereMDQQWKFGGISLVMCLALLTAACSSTGGTRRVSMSSICKATGGTYSGNMCQPAPSAQDPAKLCAAHGGVYYPGGEYCEVDNSLLWKP
Ga0207646_1033534753300025922Corn, Switchgrass And Miscanthus RhizosphereMDQQPKFQRIALVVLLALVTAACSSTGTGTRRVSMSSICKATGGTYSGNMCQPAPSAQDPAKLCAAHGG
Ga0207665_1123307913300025939Corn, Switchgrass And Miscanthus RhizosphereMNPRILRMSVVALVALSAAACSSTGGTSRISMANLCKKTGGNYVNGTCEPASNPQTAAQVCANHGGVYMAGGDYCEVDNSMFWKP
Ga0209236_104132913300026298Grasslands SoilMDQRLKFRRISLVVLLALVPAACSSTGPSRLSIGSLCKASGGTYAAGSCQPASNPQTAAQLCAGHGGVYVEG
Ga0209027_106405623300026300Grasslands SoilMDQRSKFLGISLVALLGLVSAACSSTGTSRISMSSICKATGGTYANGTCNPAPNPQTAAQLCAAHGGVYTEGGDYCEVANNMFWKP
Ga0209055_104056943300026309SoilMDQRSKFLGISLVVLLGLVPAACSSTGTSRVSMSSICKATGGTYANGTCQPAPNPQTAAQLCAAHGGVY
Ga0209761_106665823300026313Grasslands SoilMNPRILRMSVVALLALSAAACSSTGGTSRISMANLCKKTGGNYVNGTCEPAPNPQTAAQLCANHGGVYMAGGDYCEVDNGMFWKP
Ga0209801_120453413300026326SoilMDQRLKFRRISLVVLLALVPAACSSTGPSRLSMGSLCKASGGTYAAGSCQPASNPQTAAQLCAGHGGVYVEGGDYCEVANSMFWKP
Ga0209266_118331423300026327SoilMNPRILRMSVVALVALSAAACSSTGGTSRISMANLCKKTGGNYANGSCEPASNPQTAAQLCANHGGVYMAGGDYCEVDTSMFWKP
Ga0209158_124375723300026333SoilMDQRLKFRRISLVVLLALVPAACSSTGTSRVSMSSICKATGGTYANGTCQPAPNPQTAAQLCAAHGGVYMEGGDYCEVANNMFWKP
Ga0209806_111372023300026529SoilMDQRSKFLGISLVALLALVSAACSSTGTSRISMSSICKATGGTYANGTCQPAPNPQTAAQLCAAHGGVYMEGGDYCEVANNMFWKP
Ga0209648_1003766543300026551Grasslands SoilMDQRSKFGRISLVVLLALVPAACSSTGTSRISMSSICKKTGGTYADGTCQPAPSPQTASQLCAAHGGVYMAGGDYCEVDNSLFWKP
Ga0209814_1000568753300027873Populus RhizosphereMNHRFLTVPLLALLGLSAAACASGTSRINMASLCKKTGGTYVDGSCQPASNPQTAAQLCANHGGTYVSGGDYCEVDNSLFWKP
Ga0209481_1014427823300027880Populus RhizosphereMNHRFLTIPLLALLGLSAAACASGTSRINMASLCKKTGGTYVDGSCQPASNPQTAAQLCANHGGTYVSGGDYCEVDNSLFWKP
Ga0209382_10002090303300027909Populus RhizosphereVNQPSKFWSILVVVLLALLPAACSSTGTSRLNVSSMCQRSGGTYAAGTCQPASNPMTAAQLCAAHGGVYVEGGDYCEVANSMFWKP
Ga0209382_1070182513300027909Populus RhizosphereMDSRTKFRSVLLVVLLSLVPLACSSSGTSRVKVSSMCEKSGGTYVGGTCQPASKPMTSAQLCSAHGGTYDRAADLCEVDNGLIWK
Ga0209382_1206272223300027909Populus RhizosphereMNPRILKMSVVALVALSAAACSSTGGTSRISMANLCKKTGGNYVNGTCEPAPSPQTAAQLCANHGGVYMAGGDYCEVDNGMFWKQ
Ga0137415_1001466633300028536Vadose Zone SoilMDQRSKFLGISLVVLLGLVPAACSSTGTSRVSMSSICKATGGTYADGTCQPAPNPQTSAQLCAAHGGVYMAGGDYCEVANNMFWKP
Ga0335085_1090653313300032770SoilGRMNSRTALWRVTLVALLAVSAAACSNTGTSRVSMGSMCQASGGTYSGGTCLPASNPQTAAKLCAAHGGQYMAGGDYCEVDNGLLWKPLP
Ga0335082_1001469053300032782SoilMNSRTALWRVTLVALLAVSAAACSNTGTSRVSMGSMCQASGGTYSGGTCLPASNPQTAAKLCAAHGGQYMAGGDYCEVDNGLLWKPLP

 ⦗Top⦘


Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.