Metagenome / Metatranscriptome Family F050015

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F050015
Family Type	Metagenome / Metatranscriptome
Number of Sequences	146
Average Sequence Length	54 residues
Representative Sequence	MNFFIEYFKLIDLLALAALAALACAALVRNGSVWLFVAGILVAIWGAMRVMGWP
Number of Associated Samples	85
Number of Associated Scaffolds	146

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	81.51 %
% of genes near scaffold ends (potentially truncated)	23.29 %
% of genes from short scaffolds (< 2000 bps)	83.56 %
Associated GOLD sequencing projects	77
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.55

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (65.068 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil (22.603 % of family members)
Environment Ontology (ENVO)	Unclassified (47.260 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (63.699 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 57.32% β-sheet: 0.00% Coil/Unstructured: 42.68%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.55
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.55
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 146 Family Scaffolds
PF00724	Oxidored_FMN	4.79
PF03626	COX4_pro	2.74
PF00106	adh_short	2.05
PF14707	Sulfatase_C	2.05
PF13561	adh_short_C2	1.37
PF09335	SNARE_assoc	1.37
PF02780	Transketolase_C	1.37
PF00510	COX3	1.37
PF00190	Cupin_1	0.68
PF02627	CMD	0.68
PF07568	HisKA_2	0.68
PF04392	ABC_sub_bind	0.68
PF05378	Hydant_A_N	0.68
PF12071	DUF3551	0.68
PF16177	ACAS_N	0.68
PF00535	Glycos_transf_2	0.68
PF03186	CobD_Cbib	0.68
PF01494	FAD_binding_3	0.68
PF02371	Transposase_20	0.68
PF00378	ECH_1	0.68
PF02515	CoA_transf_3	0.68
PF00528	BPD_transp_1	0.68
PF13560	HTH_31	0.68
PF02113	Peptidase_S13	0.68
PF00480	ROK	0.68
PF13424	TPR_12	0.68
PF02518	HATPase_c	0.68
PF12840	HTH_20	0.68
PF02632	BioY	0.68
PF13374	TPR_10	0.68
PF00487	FA_desaturase	0.68
PF07730	HisKA_3	0.68
PF07690	MFS_1	0.68
PF00165	HTH_AraC	0.68
PF02913	FAD-oxidase_C	0.68
PF06240	COXG	0.68
PF13419	HAD_2	0.68
PF13567	DUF4131	0.68

COG ID	Name	Functional Category	% Frequency in 146 Family Scaffolds
COG0042	tRNA-dihydrouridine synthase	Translation, ribosomal structure and biogenesis [J]	4.79
COG1902	2,4-dienoyl-CoA reductase or related NADH-dependent reductase, Old Yellow Enzyme (OYE) family	Energy production and conversion [C]	4.79
COG3125	Heme/copper-type cytochrome/quinol oxidase, subunit 4	Energy production and conversion [C]	2.74
COG0145	N-methylhydantoinase A/oxoprolinase/acetone carboxylase, beta subunit	Amino acid transport and metabolism [E]	1.37
COG0398	Uncharacterized membrane protein YdjX, related to fungal oxalate transporter, TVP38/TMEM64 family	Function unknown [S]	1.37
COG0586	Membrane integrity protein DedA, putative transporter, DedA/Tvp38 family	Cell wall/membrane/envelope biogenesis [M]	1.37
COG0654	2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases	Energy production and conversion [C]	1.37
COG1238	Uncharacterized membrane protein YqaA, VTT domain	Function unknown [S]	1.37
COG1845	Heme/copper-type cytochrome/quinol oxidase, subunit 3	Energy production and conversion [C]	1.37
COG1940	Sugar kinase of the NBD/HSP70 family, may contain an N-terminal HTH domain	Transcription [K]	1.37
COG0277	FAD/FMN-containing lactate dehydrogenase/glycolate oxidase	Energy production and conversion [C]	0.68
COG0578	Glycerol-3-phosphate dehydrogenase	Energy production and conversion [C]	0.68
COG0599	Uncharacterized conserved protein YurZ, alkylhydroperoxidase/carboxymuconolactone decarboxylase family	General function prediction only [R]	0.68
COG0644	Dehydrogenase (flavoprotein)	Energy production and conversion [C]	0.68
COG0665	Glycine/D-amino acid oxidase (deaminating)	Amino acid transport and metabolism [E]	0.68
COG1268	Biotin transporter BioY	Coenzyme transport and metabolism [H]	0.68
COG1270	Cobalamin biosynthesis protein CobD/CbiB	Coenzyme transport and metabolism [H]	0.68
COG1398	Fatty-acid desaturase	Lipid transport and metabolism [I]	0.68
COG1804	Crotonobetainyl-CoA:carnitine CoA-transferase CaiB and related acyl-CoA transferases	Lipid transport and metabolism [I]	0.68
COG2027	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	0.68
COG2128	Alkylhydroperoxidase family enzyme, contains CxxC motif	Inorganic ion transport and metabolism [P]	0.68
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	0.68
COG3239	Fatty acid desaturase	Lipid transport and metabolism [I]	0.68
COG3427	Carbon monoxide dehydrogenase subunit CoxG	Energy production and conversion [C]	0.68
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.68
COG3850	Signal transduction histidine kinase NarQ, nitrate/nitrite-specific	Signal transduction mechanisms [T]	0.68
COG3851	Signal transduction histidine kinase UhpB, glucose-6-phosphate specific	Signal transduction mechanisms [T]	0.68
COG3920	Two-component sensor histidine kinase, HisKA and HATPase domains	Signal transduction mechanisms [T]	0.68
COG4564	Signal transduction histidine kinase	Signal transduction mechanisms [T]	0.68
COG4585	Signal transduction histidine kinase ComP	Signal transduction mechanisms [T]	0.68

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	65.07 %
Unclassified	root	N/A	34.93 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	65.07 %
Unclassified	root	N/A	34.93 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	65.07 %
Unclassified	root	N/A	34.93 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	49.32 %
Unclassified	root	N/A	34.93 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	1.37 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	37.67 %
Unclassified	root	N/A	34.93 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1.37 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.93 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	19.86 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	2.05 %
unclassified Betaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria	1.37 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.93 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	4.11 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2.74 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2.05 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1.37 %
unclassified Hyphomicrobiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales	1.37 %
Methylocystaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae	0.68 %
Rhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	0.68 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.93 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2.74 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2.05 %
Hyphomicrobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium	1.37 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1.37 %
Rhizobiales bacterium GAS188	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Rhizobiales bacterium GAS188	0.68 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	0.68 %
Methylocystis	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylocystis	0.68 %
Rhodoplanes	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes	0.68 %
unclassified Hyphomicrobiaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae	0.68 %
Sinorhizobium/Ensifer group	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Sinorhizobium/Ensifer group	0.68 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.93 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2.05 %
unclassified Hyphomicrobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium → unclassified Hyphomicrobium	1.37 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1.37 %
Hyphomicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	0.68 %
unclassified Methylocystis	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylocystis → unclassified Methylocystis	0.68 %
unclassified Rhodoplanes	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes	0.68 %
Bradyrhizobium centrolobii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium centrolobii	0.68 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	0.68 %
Ensifer	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Sinorhizobium/Ensifer group → Ensifer	0.68 %
Rhizobiales bacterium GAS188	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Rhizobiales bacterium GAS188	0.68 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	0.68 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.93 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2.05 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1.37 %
Ensifer aridi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Sinorhizobium/Ensifer group → Ensifer → Ensifer aridi	0.68 %
Hyphomicrobium sp. 99	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium → unclassified Hyphomicrobium → Hyphomicrobium sp. 99	0.68 %
Hyphomicrobium sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium → unclassified Hyphomicrobium → Hyphomicrobium sp.	0.68 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	0.68 %
Methylocystis sp. MJC1	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylocystis → unclassified Methylocystis → Methylocystis sp. MJC1	0.68 %
Hyphomicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	0.68 %
Bradyrhizobium centrolobii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium centrolobii	0.68 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	0.68 %
Rhizobiales bacterium GAS188	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Rhizobiales bacterium GAS188	0.68 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	0.68 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.68 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000364\|INPhiseqgaiiFebDRAFT_104649903	Not Available	569	Open in IMG/M
3300000597\|AF_2010_repII_A1DRAFT_10001903	All Organisms → cellular organisms → Bacteria → Proteobacteria	5447	Open in IMG/M
3300000955\|JGI1027J12803_100445410	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1352	Open in IMG/M
3300000955\|JGI1027J12803_109579464	Not Available	964	Open in IMG/M
3300000956\|JGI10216J12902_114169181	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	661	Open in IMG/M
3300001431\|F14TB_100540686	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	501	Open in IMG/M
3300004463\|Ga0063356_105551900	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	541	Open in IMG/M
3300004480\|Ga0062592_100412762	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1079	Open in IMG/M
3300004633\|Ga0066395_10377317	Not Available	794	Open in IMG/M
3300005175\|Ga0066673_10895841	Not Available	505	Open in IMG/M
3300005184\|Ga0066671_10279587	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1039	Open in IMG/M
3300005332\|Ga0066388_100013792	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	6570	Open in IMG/M
3300005332\|Ga0066388_100135274	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3018	Open in IMG/M
3300005332\|Ga0066388_100924211	Not Available	1447	Open in IMG/M
3300005332\|Ga0066388_101088160	Not Available	1352	Open in IMG/M
3300005332\|Ga0066388_101410674	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1211	Open in IMG/M
3300005332\|Ga0066388_101519661	All Organisms → cellular organisms → Bacteria → Proteobacteria	1172	Open in IMG/M
3300005332\|Ga0066388_101971449	All Organisms → cellular organisms → Bacteria → Proteobacteria	1045	Open in IMG/M
3300005332\|Ga0066388_105291537	All Organisms → cellular organisms → Bacteria	654	Open in IMG/M
3300005332\|Ga0066388_106787977	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	576	Open in IMG/M
3300005363\|Ga0008090_10196372	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	701	Open in IMG/M
3300005441\|Ga0070700_101061998	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	669	Open in IMG/M
3300005540\|Ga0066697_10204754	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1173	Open in IMG/M
3300005560\|Ga0066670_10033670	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2530	Open in IMG/M
3300005561\|Ga0066699_10251613	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1247	Open in IMG/M
3300005562\|Ga0058697_10109906	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1156	Open in IMG/M
3300005713\|Ga0066905_100169895	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1595	Open in IMG/M
3300005713\|Ga0066905_100182949	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1548	Open in IMG/M
3300005713\|Ga0066905_100258016	Not Available	1344	Open in IMG/M
3300005713\|Ga0066905_100324899	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1219	Open in IMG/M
3300005713\|Ga0066905_100357913	All Organisms → cellular organisms → Bacteria	1169	Open in IMG/M
3300005713\|Ga0066905_100387135	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1130	Open in IMG/M
3300005713\|Ga0066905_100927247	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	764	Open in IMG/M
3300005713\|Ga0066905_100949024	Not Available	756	Open in IMG/M
3300005713\|Ga0066905_101066446	All Organisms → cellular organisms → Bacteria	716	Open in IMG/M
3300005713\|Ga0066905_101392955	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium → unclassified Hyphomicrobium → Hyphomicrobium sp. 99	634	Open in IMG/M
3300005764\|Ga0066903_100070564	All Organisms → cellular organisms → Bacteria	4465	Open in IMG/M
3300005764\|Ga0066903_100094736	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3993	Open in IMG/M
3300005764\|Ga0066903_100244962	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2756	Open in IMG/M
3300005764\|Ga0066903_100484809	All Organisms → cellular organisms → Bacteria → Proteobacteria	2086	Open in IMG/M
3300005764\|Ga0066903_100939506	All Organisms → cellular organisms → Bacteria → Proteobacteria	1571	Open in IMG/M
3300005764\|Ga0066903_101062867	All Organisms → cellular organisms → Bacteria	1488	Open in IMG/M
3300005764\|Ga0066903_103311827	Not Available	870	Open in IMG/M
3300005764\|Ga0066903_105176509	Not Available	690	Open in IMG/M
3300005764\|Ga0066903_105932794	All Organisms → cellular organisms → Bacteria	640	Open in IMG/M
3300005764\|Ga0066903_106652755	All Organisms → cellular organisms → Bacteria → Proteobacteria	601	Open in IMG/M
3300005843\|Ga0068860_100576349	Not Available	1129	Open in IMG/M
3300005937\|Ga0081455_10020137	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	6292	Open in IMG/M
3300006038\|Ga0075365_10277431	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1179	Open in IMG/M
3300006049\|Ga0075417_10104477	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1287	Open in IMG/M
3300006051\|Ga0075364_10625871	All Organisms → cellular organisms → Bacteria → Proteobacteria	735	Open in IMG/M
3300006806\|Ga0079220_10691627	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	747	Open in IMG/M
3300006844\|Ga0075428_100027418	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	6304	Open in IMG/M
3300006844\|Ga0075428_102494243	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	530	Open in IMG/M
3300006845\|Ga0075421_100001802	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	25253	Open in IMG/M
3300006845\|Ga0075421_100684468	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1194	Open in IMG/M
3300006846\|Ga0075430_100511410	All Organisms → cellular organisms → Bacteria	991	Open in IMG/M
3300006846\|Ga0075430_101502693	Not Available	553	Open in IMG/M
3300006854\|Ga0075425_100002994	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	17036	Open in IMG/M
3300006871\|Ga0075434_102432822	All Organisms → cellular organisms → Bacteria	525	Open in IMG/M
3300006904\|Ga0075424_102325021	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	563	Open in IMG/M
3300009094\|Ga0111539_10418678	Not Available	1560	Open in IMG/M
3300009100\|Ga0075418_10613678	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1171	Open in IMG/M
3300009100\|Ga0075418_11136627	Not Available	846	Open in IMG/M
3300009101\|Ga0105247_10392952	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	986	Open in IMG/M
3300009147\|Ga0114129_10205618	All Organisms → cellular organisms → Bacteria → Proteobacteria	2664	Open in IMG/M
3300009147\|Ga0114129_10211735	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2620	Open in IMG/M
3300009147\|Ga0114129_12287390	Not Available	649	Open in IMG/M
3300009147\|Ga0114129_12699354	All Organisms → cellular organisms → Bacteria	592	Open in IMG/M
3300009156\|Ga0111538_11264316	Not Available	932	Open in IMG/M
3300009177\|Ga0105248_10702244	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1141	Open in IMG/M
3300009553\|Ga0105249_11360951	Not Available	782	Open in IMG/M
3300009792\|Ga0126374_11649369	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	531	Open in IMG/M
3300010036\|Ga0126305_10630491	Not Available	722	Open in IMG/M
3300010043\|Ga0126380_10045147	Not Available	2342	Open in IMG/M
3300010043\|Ga0126380_10783609	Not Available	778	Open in IMG/M
3300010043\|Ga0126380_10835701	Not Available	758	Open in IMG/M
3300010043\|Ga0126380_11158383	Not Available	663	Open in IMG/M
3300010043\|Ga0126380_11364629	All Organisms → cellular organisms → Bacteria	621	Open in IMG/M
3300010046\|Ga0126384_10125521	All Organisms → cellular organisms → Bacteria	1938	Open in IMG/M
3300010046\|Ga0126384_10537332	Not Available	1014	Open in IMG/M
3300010046\|Ga0126384_11673971	Not Available	601	Open in IMG/M
3300010046\|Ga0126384_12393648	All Organisms → cellular organisms → Bacteria → Proteobacteria	511	Open in IMG/M
3300010047\|Ga0126382_10458403	Not Available	1013	Open in IMG/M
3300010047\|Ga0126382_10662489	Not Available	869	Open in IMG/M
3300010047\|Ga0126382_11053891	Not Available	717	Open in IMG/M
3300010047\|Ga0126382_11176686	Not Available	685	Open in IMG/M
3300010358\|Ga0126370_10048934	Not Available	2675	Open in IMG/M
3300010358\|Ga0126370_10564948	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	975	Open in IMG/M
3300010359\|Ga0126376_11234436	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	764	Open in IMG/M
3300010359\|Ga0126376_12334229	All Organisms → cellular organisms → Bacteria	581	Open in IMG/M
3300010362\|Ga0126377_10032494	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4423	Open in IMG/M
3300010362\|Ga0126377_10239978	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Sinorhizobium/Ensifer group → Ensifer → Ensifer aridi	1759	Open in IMG/M
3300010362\|Ga0126377_10894386	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	950	Open in IMG/M
3300010362\|Ga0126377_12365129	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium centrolobii	607	Open in IMG/M
3300010366\|Ga0126379_10973399	All Organisms → cellular organisms → Bacteria	953	Open in IMG/M
3300010366\|Ga0126379_12343826	Not Available	634	Open in IMG/M
3300010398\|Ga0126383_10647000	Not Available	1132	Open in IMG/M
3300010398\|Ga0126383_11156816	Not Available	863	Open in IMG/M
3300010398\|Ga0126383_12865673	Not Available	563	Open in IMG/M
3300012081\|Ga0154003_1012971	Not Available	1760	Open in IMG/M
3300012200\|Ga0137382_10588821	Not Available	794	Open in IMG/M
3300012582\|Ga0137358_10036253	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3256	Open in IMG/M
3300012582\|Ga0137358_10181891	All Organisms → cellular organisms → Bacteria → Proteobacteria	1434	Open in IMG/M
3300012948\|Ga0126375_10804051	Not Available	745	Open in IMG/M
3300012948\|Ga0126375_11117912	Not Available	650	Open in IMG/M
3300012971\|Ga0126369_12375905	Not Available	616	Open in IMG/M
3300014267\|Ga0075313_1100114	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	715	Open in IMG/M
3300014968\|Ga0157379_11686365	Not Available	620	Open in IMG/M
3300014969\|Ga0157376_12051680	All Organisms → cellular organisms → Bacteria	610	Open in IMG/M
3300015371\|Ga0132258_10206689	All Organisms → cellular organisms → Bacteria → Proteobacteria	4766	Open in IMG/M
3300015371\|Ga0132258_12026478	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	1448	Open in IMG/M
3300016357\|Ga0182032_10102625	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	2022	Open in IMG/M
3300016387\|Ga0182040_10502901	All Organisms → cellular organisms → Bacteria	968	Open in IMG/M
3300017974\|Ga0187777_11294109	Not Available	535	Open in IMG/M
3300018058\|Ga0187766_10606917	Not Available	747	Open in IMG/M
3300018433\|Ga0066667_10106973	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	1877	Open in IMG/M
3300018433\|Ga0066667_12320746	Not Available	503	Open in IMG/M
3300018469\|Ga0190270_10681994	All Organisms → cellular organisms → Bacteria	1016	Open in IMG/M
3300018469\|Ga0190270_10815423	All Organisms → cellular organisms → Bacteria	941	Open in IMG/M
3300020581\|Ga0210399_11482958	Not Available	527	Open in IMG/M
3300021082\|Ga0210380_10022583	All Organisms → cellular organisms → Bacteria	2673	Open in IMG/M
3300021178\|Ga0210408_11233874	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Rhizobiales bacterium GAS188	570	Open in IMG/M
3300021377\|Ga0213874_10353921	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	563	Open in IMG/M
3300021560\|Ga0126371_10064217	All Organisms → cellular organisms → Bacteria → Proteobacteria	3550	Open in IMG/M
3300021560\|Ga0126371_10820300	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium → unclassified Hyphomicrobium → Hyphomicrobium sp.	1076	Open in IMG/M
3300021560\|Ga0126371_12138268	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylocystis → unclassified Methylocystis → Methylocystis sp. MJC1	675	Open in IMG/M
3300026075\|Ga0207708_11739713	All Organisms → cellular organisms → Bacteria	547	Open in IMG/M
3300026342\|Ga0209057_1198744	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	571	Open in IMG/M
3300027873\|Ga0209814_10017309	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2895	Open in IMG/M
3300027873\|Ga0209814_10442461	All Organisms → cellular organisms → Bacteria	573	Open in IMG/M
3300027874\|Ga0209465_10144521	All Organisms → cellular organisms → Bacteria → Acidobacteria	1179	Open in IMG/M
3300027880\|Ga0209481_10264856	Not Available	867	Open in IMG/M
3300027907\|Ga0207428_10420190	Not Available	977	Open in IMG/M
3300027909\|Ga0209382_10005613	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	16316	Open in IMG/M
3300028381\|Ga0268264_11280959	Not Available	743	Open in IMG/M
3300028592\|Ga0247822_10569415	All Organisms → cellular organisms → Bacteria	904	Open in IMG/M
3300028875\|Ga0307289_10449934	Not Available	529	Open in IMG/M
3300028878\|Ga0307278_10284900	Not Available	731	Open in IMG/M
3300031545\|Ga0318541_10566552	Not Available	635	Open in IMG/M
3300031573\|Ga0310915_10154738	All Organisms → cellular organisms → Bacteria → Proteobacteria	1587	Open in IMG/M
3300031740\|Ga0307468_100870375	All Organisms → cellular organisms → Bacteria → Proteobacteria	777	Open in IMG/M
3300031740\|Ga0307468_101980853	Not Available	557	Open in IMG/M
3300031879\|Ga0306919_10347321	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1133	Open in IMG/M
3300032261\|Ga0306920_101357779	All Organisms → cellular organisms → Bacteria → Proteobacteria	1020	Open in IMG/M
3300033158\|Ga0335077_11989326	Not Available	540	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	73.29%
Host-Associated	Host-Associated	26.71%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	72.60%
Plants	Host-Associated → Plants	26.03%
Aquatic	Environmental → Aquatic	0.68%
Fungi	Host-Associated → Fungi	0.68%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	72.60%
Rhizosphere	Host-Associated → Plants → Rhizosphere	19.18%
Rhizoplane	Host-Associated → Plants → Rhizoplane	4.11%
Roots	Host-Associated → Plants → Roots	2.05%
Freshwater	Environmental → Aquatic → Freshwater	0.68%
Phylloplane	Host-Associated → Plants → Phylloplane	0.68%
Mycelium	Host-Associated → Fungi → Mycelium	0.68%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	45.89%
Loam	Environmental → Terrestrial → Soil → Loam	23.97%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	19.18%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.74%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.74%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.37%
Bulk Soil	Host-Associated → Plants → Roots → Bulk Soil	1.37%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.68%
Unclassified	Host-Associated → Plants → Roots → Unclassified	0.68%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified	0.68%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified	0.68%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	28.08%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	21.23%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	19.18%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	7.53%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	7.53%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.74%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.74%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.37%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.37%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.37%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.37%
Unclassified	Host-Associated → Plants → Roots → Bulk Soil → Unclassified	1.37%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.68%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.68%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.68%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	0.68%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified	0.68%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified	0.68%

Habitat	Taxonomy	Distribution
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	22.60%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	21.23%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	15.75%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	6.16%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.74%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.74%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.74%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	2.05%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	2.05%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.37%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.37%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.37%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.37%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.37%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.37%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.37%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	1.37%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.68%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.68%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.68%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.68%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.68%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.68%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.68%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	0.68%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.68%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.68%
Plant Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Plant Roots	0.68%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.68%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.68%
Agave	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified → Agave	0.68%
Attine Ant Fungus Gardens	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified → Attine Ant Fungus Gardens	0.68%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	0.68%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000597	Forest soil microbial communities from Amazon forest - 2010 replicate II A1	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001431	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.4TB clc assemly	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005184	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146	Environmental	Open in IMG/M
3300005560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005562	Agave microbial communities from Guanajuato, Mexico - As.Ma.e	Host-Associated	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300006038	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5	Host-Associated	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006051	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4	Host-Associated	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010036	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012081	Attine ant fungus gardens microbial communities from Florida, USA - TSFL087 MetaG	Host-Associated	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300014267	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_CattailC_D1	Environmental	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300018058	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MG	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021082	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_coex redo	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021377	Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7	Host-Associated	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026342	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146 (SPAdes)	Environmental	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027880	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 (SPAdes)	Host-Associated	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028592	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Cellulose_Day30	Environmental	Open in IMG/M
3300028875	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_143	Environmental	Open in IMG/M
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPhiseqgaiiFebDRAFT_1046499031	3300000364	Soil	MGLIVEYFRLIDLLALTALAAPACAAFVRNRNVWLFVAGISVAIRGTIRVMGLA*
AF_2010_repII_A1DRAFT_100019037	3300000597	Forest Soil	MNFFVQYFKLIDVLALAALAALACAALVRNRSVWLFVAGILVAIWGAMRIMGWP*
JGI1027J12803_1004454102	3300000955	Soil	MNFFVEYFKLIDLLALAALAALACAALVRNRSVWLFVAGSLAAIWGAMRILGWP*
JGI1027J12803_1095794641	3300000955	Soil	MGLIVEYFRLIDLLALTALAAPACAAFVRNRNVWLFVAGISVAIRGTI
JGI10216J12902_1141691812	3300000956	Soil	LIDLLALAALAALACAALVRNRSVWLFVAGSLAAIWGAMRILGWP*
F14TB_1005406861	3300001431	Soil	MNFFVEYFKLIDLLALAALAALACAALVRTRSVWLFVAGILVAIWGAMRIMGWP*
Ga0063356_1055519002	3300004463	Arabidopsis Thaliana Rhizosphere	KLIDLLALAALAALACAALVRNGSVWLFVAGILVAIWGTVRALGLA*
Ga0062592_1004127621	3300004480	Soil	MGLILEYFRLIDLLALAALVALACAAFVRNRSVWLFVAGISVAIWGTLRAMGLS*
Ga0066395_103773172	3300004633	Tropical Forest Soil	NFFIEYFKLIDLLALAALAALACAALVRNGSVWLFLAGILAAIWGTMRVMGWP*
Ga0066673_108958412	3300005175	Soil	MNFLVEYLKLIDLLALAALAALACAALVRNRSVWLFVAVILVAIWGAMRIVGWP*
Ga0066671_102795871	3300005184	Soil	EALMNFLVEYLKLIDLLALAALAALACAALVRNRSVWLFVAVILVAIWGAMRIMGWP*
Ga0066388_10001379210	3300005332	Tropical Forest Soil	MSFFIEYFKLIDLLALAALAALACAALVRNGSVWLFLAGILVAIWGVMRVVAWP*
Ga0066388_1001352743	3300005332	Tropical Forest Soil	MNFFVEYFRLIDLLALAALVALACAALVRNRSVWLFVAAILVAIWGAMRIISLP*
Ga0066388_1009242112	3300005332	Tropical Forest Soil	MNFFIEYFKLIDLLALAALAALACAALFRNGSVWLFVAGILVAIWGAMRVMGGNQTASV*
Ga0066388_1010881603	3300005332	Tropical Forest Soil	MNFFIEYFKLIDLLALAALAALACAALVRNRSVWLFVAVVLVAIWGAMRIMGWP*
Ga0066388_1014106742	3300005332	Tropical Forest Soil	VSVVIEYFKLIDLLALLALAVLAFVALRRTGSVWLFVSGILIAIWGAMRLLGWP*
Ga0066388_1015196612	3300005332	Tropical Forest Soil	MNFLVEYFKLIDLLALAALAALACAALVRNRSVWLFVAVILVAIWGAMRIMGWP*
Ga0066388_1019714492	3300005332	Tropical Forest Soil	MNFLVDYLKLIDLLALAALAALACAALVRNRSVWLFVAVILVAIWGAMRIMGWP*
Ga0066388_1052915371	3300005332	Tropical Forest Soil	MNFFFEYFKLIDLLALAALAALACAALVRNGSVWLFVAGILVAIWGAMRVMGWP*
Ga0066388_1067879771	3300005332	Tropical Forest Soil	MRVVIEYFRLIDLLALLALAVLAFAALRRTGSVWLFVSGILIAIWGAMRLLGWP*
Ga0008090_101963722	3300005363	Tropical Rainforest Soil	MNFFVEYFRLIDLLALAALVALACAALVRNRSVWLFVAAILVAIWGAMRIITLP*
Ga0070700_1010619981	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	MSTFLIDYFKAIDLLALAGLAALACAALSRNGNVWLFIAGVIVAIWGTMRVLGWP*
Ga0066697_102047541	3300005540	Soil	MNFLVEYLKLIDLLALAALAALACAALVRNRSVWLFVAVILVAIW
Ga0066670_100336704	3300005560	Soil	MNFLVEYLKLIDLLALAALAALACAALVRNRSVWLFVAVILVAIWGAMRIMGWP*
Ga0066699_102516132	3300005561	Soil	MNFFVEYFKLIDLLALAALAVLACAALVRNRSVWLFVAGILVAIWGAMRIMGWP*
Ga0058697_101099062	3300005562	Agave	MNFFVEYLKLIDLLALAALAALACAALVRNGSVWLFVAGILVAIWGAMRIMGWP*
Ga0066905_1001698952	3300005713	Tropical Forest Soil	MNFFIDYFKLIDILALAALAALACAALVRNKSVWLFVAVILVVIWGATRIMGWP*
Ga0066905_1001829494	3300005713	Tropical Forest Soil	MSVVIEYFKLIDLLALLALAVLAFVALRRTGSVWLFVSGILIAIWGAMRLLGWP*
Ga0066905_1002580162	3300005713	Tropical Forest Soil	LMNFFIEYFKLIDLLALAALAALACAALVRSGTVWLSVAGILVAIWGAMRVLGWP*
Ga0066905_1003248992	3300005713	Tropical Forest Soil	MKFFVDYFKLIDLLALAALAALACAALVRNRSVWLFVAGILVAIWGAMRVMGWP*
Ga0066905_1003579133	3300005713	Tropical Forest Soil	MNFFVEYFRLIDLLALAALAALACAALVRNRSVWLFVAEILVALWGAMRIIGWFLSWP*
Ga0066905_1003871352	3300005713	Tropical Forest Soil	MDYFVEYFKLIDLLALAALAALACAALIRNGSVWLFVAGILAAIWGAMRVLGWP*
Ga0066905_1009272472	3300005713	Tropical Forest Soil	MNFFIDYFKLIDLLALAALAALACAALIRNASVWLFVAGILVAIWGAMRVMGWP*
Ga0066905_1009490242	3300005713	Tropical Forest Soil	LMNFFIEYFKLIDLLALAALAALACAALVRNASVWLFVAGILVAIWGAMRILGWP*
Ga0066905_1010664462	3300005713	Tropical Forest Soil	MNFFIEYFKLIDLLALAALAALACAALVRNGSVWLFVAGILVAIWGAMRIMGWP*
Ga0066905_1013929551	3300005713	Tropical Forest Soil	MNFFVEYFRLIDLLALAALVALACAALVRNRSVWLFVAAILVAIW
Ga0066903_10007056410	3300005764	Tropical Forest Soil	MNFFIEYFKLIDLLALAALAVLACAALVRNGSVWLFVAGILVAIWGAMRVMGWP*
Ga0066903_1000947365	3300005764	Tropical Forest Soil	MNFFIEYFKLIDLLALAALAALACAALVRNGSVWLFVAGILVAIWGAMRVVGWP*
Ga0066903_1002449625	3300005764	Tropical Forest Soil	MNFFVEYFKLIDLLALAALAALACAALIRNRSVWLFVAGILVVIWGAMRITGWP*
Ga0066903_1004848092	3300005764	Tropical Forest Soil	VNFFIEYFKLIDLLALAALAALACAALVRNGSVWLFLAGILAAIWGTMRVMGWP*
Ga0066903_1009395062	3300005764	Tropical Forest Soil	MNFLVEYLKLIDLLALAALAALACAALVRNRSIWLFVAVILVAIWGAMRIMGWP*
Ga0066903_1010628672	3300005764	Tropical Forest Soil	MNFLVDYFKLIDLLALAALAALACAALVRSRSVWLFVAGILVVIWGVMRIMG*
Ga0066903_1033118271	3300005764	Tropical Forest Soil	MNFFIEYFKLIDLLALAALAALACAALVRNGSIWLFVAAILVAIWGAMRVMGWP*
Ga0066903_1051765093	3300005764	Tropical Forest Soil	LTNFFVEYFKLIDLLALAALAALACAALVRNRSVWLFVAEILVAIWGAMRIIGWFLSWLR
Ga0066903_1059327942	3300005764	Tropical Forest Soil	MNFLVDYLKLIDLLALAALAALACAALVHNRSVWLFVAVILVAIWGAMRIMGWP*
Ga0066903_1066527552	3300005764	Tropical Forest Soil	FLVEYLKLIDLLALAALAALACAALVRNRSVWLFVAVILVAIWGAMRIMGWP*
Ga0068860_1005763492	3300005843	Switchgrass Rhizosphere	MSTFLIDYFKAIDLLALAGLAALACAALFRNGNVWLFIAGVIVAIWGTMRVLGWP*
Ga0081455_100201372	3300005937	Tabebuia Heterophylla Rhizosphere	MRVVIEYFKLIDLLALPALAVLAFAALRRTGSVWLFVSGILIAIWGAMRLLGWP*
Ga0075365_102774312	3300006038	Populus Endosphere	MNFLVDYLKLIDLLALAALAALACAALVRNRSVWLFVAVILVAIWGAMRIM
Ga0075417_101044772	3300006049	Populus Rhizosphere	MNFFVEYFKLIDLLALAALAALACAALVRTGSVWLFVAGILVAIWGAMRIMGWP*
Ga0075364_106258712	3300006051	Populus Endosphere	MNFLVDYLKLIDLLALAALAALACAALVRNRSVWLFVAVILVAIWGAIRIMGWP*
Ga0079220_106916272	3300006806	Agricultural Soil	MNFLVDYLKLIDLLALIALAALACAALVRNRSVWLFVAVILVAIWGAMRIMGWP*
Ga0075428_1000274186	3300006844	Populus Rhizosphere	MSFFIDYFKLIDFLALAGLAALACAALIRNGSVWLFVAGILVAIWGTMRVMGWP*
Ga0075428_1024942431	3300006844	Populus Rhizosphere	LMNFFVEYFKLIDLLALGALAALACAALVRTGSVWLFVAGILVAIWGAMRIMGWP*
Ga0075421_10000180225	3300006845	Populus Rhizosphere	MSLMVEYFKLIDLLALAALASLACAALVRNGSVWLFVAGLLVAAWGTMRVVGWP*
Ga0075421_1006844682	3300006845	Populus Rhizosphere	MESFVEYFRLIDLLALAALAALALAALIRDGSVWLFVAGILAAIWGAMRILGLP*
Ga0075430_1005114101	3300006846	Populus Rhizosphere	MSFFIDYFKLIDFLALAGLAALACAALIRNGSVWLFVAGILVAIWGTMRVM
Ga0075430_1015026931	3300006846	Populus Rhizosphere	MGLIVEYFRLIDLLALAALAALACAAFVRNRSVWLLVAGISVAIWGTLRVTGLS*
Ga0075425_10000299410	3300006854	Populus Rhizosphere	MNFFIEYFKLIDLLALAALAALAFAALVRNGSVWLFVAGILVVIWGAMRVMGWP*
Ga0075434_1024328222	3300006871	Populus Rhizosphere	MNFLVEYLKLIDLLALAALAALACAALVRNRSVWLFVAVILVAIWGATRIMGWP*
Ga0075424_1023250212	3300006904	Populus Rhizosphere	MGFIVEYFKVIDLLALVALAALACAALVRNGSVWLFVAGILVAIWGAMRIMGLP*
Ga0111539_104186782	3300009094	Populus Rhizosphere	MTTFLVDYFKAIDLLALAGLAALACAALFRSGSVWLFIAGDIVAIWGTMRVLGWP*
Ga0075418_106136782	3300009100	Populus Rhizosphere	MSLIVEYFKLIDLLALAALASLACAALVRNGSVWLFVAGLLVAAWGTMRVVGWP*
Ga0075418_111366272	3300009100	Populus Rhizosphere	MGLIVEYFRLIDLLALAALAALACAAFVRNRSVWLFVAGISVAIWGTLRVTGLS*
Ga0105247_103929522	3300009101	Switchgrass Rhizosphere	MNYFVEYFSLIDLLALAALAALAYAALVRNGTVWLSLAGIPVSIWGAMRVIG*
Ga0114129_102056182	3300009147	Populus Rhizosphere	MTTFLIDYFKAIDLLALAGLAALACAALFRNGSVWLFIAGVAMAVWGTMRVFGWP*
Ga0114129_102117355	3300009147	Populus Rhizosphere	MSFFIDYFKLIDFLALAGLAALACAALIRNGSVWLFVAGILVAIWGTMRVMGW
Ga0114129_122873901	3300009147	Populus Rhizosphere	MSLMVEYFKLIDLLALAALASLACAALVRNGSVWLFVAGLLVAAWGTMR
Ga0114129_126993542	3300009147	Populus Rhizosphere	MGLIVEYFRLIDLLALAALAALACAAFVRNRSVWLFVAGIAVAIWGTIRVMGLS*
Ga0111538_112643161	3300009156	Populus Rhizosphere	LEEPMTTFLVDYFKAIDLLALAGLAALACAALFRSGSVWLFIAGDIVAIWGTMRVLGWP*
Ga0105248_107022441	3300009177	Switchgrass Rhizosphere	MNYFVEYFRLIDLLALAALAALAYAAWVRNGTVWLSLAGILVAIWGAMRVIG*
Ga0105249_113609511	3300009553	Switchgrass Rhizosphere	MGLIVEYFRLIDLLALAALAALACAAFVRNRSVWLFVAGISVAIWGTLRAMGLS*
Ga0126374_116493692	3300009792	Tropical Forest Soil	VEYLKLIDLLALAALAALACAALVRNRSVWLFVAVILVAIWGAMRIMGWP*
Ga0126305_106304911	3300010036	Serpentine Soil	MNLFMEYFKLIDLLAIAALAALACTAVVRNGSVWLFIAGILVALWGAMRVMGWP*
Ga0126380_100451475	3300010043	Tropical Forest Soil	LVNFFIEYFKLIDLLALAALAALACAALVRNGSVWLFLAGILAAIWGTMRVMGWP*
Ga0126380_107836091	3300010043	Tropical Forest Soil	MNFFIEYFKLIDLLALAALAALACAALVRNRSVWLFVAVILVAIWGAMRIMGWP*
Ga0126380_108357013	3300010043	Tropical Forest Soil	MNFFVEYFRLIDFLALAALAALACAALVRNRSVWLFVAEILVALWGAMRIIGWFLSWP*
Ga0126380_111583831	3300010043	Tropical Forest Soil	ALAALACAALVRNKSVWLFVAVILLVIWGATRIMGWP*
Ga0126380_113646291	3300010043	Tropical Forest Soil	LGSSRRCRSAGELNFFIEYFKLIDLLALAALAALACAALVRNGSVWLFVAGILVAIWGAMRIMGWP*
Ga0126384_101255211	3300010046	Tropical Forest Soil	LNYFIEYFKLIDLLALAALAALACAALVRNGTVWLSVAGILVAIWGAMRVIGWR*
Ga0126384_105373322	3300010046	Tropical Forest Soil	MNFFIEYFKLIDLLALAALAALACAALVRNGSVWLFVAGILVAIWGAMRVVGWT*
Ga0126384_116739711	3300010046	Tropical Forest Soil	MSVIIEYFKLIDLLALLALAVLAFAALRRTGSVWLFVAGILIAIWGVMRLLGWP*
Ga0126384_123936481	3300010046	Tropical Forest Soil	VSVVIEYFKLIDLLALLALAVLAVAALRRTGSVWLFVSGILIAIWGAMRLLGWP*
Ga0126382_104584032	3300010047	Tropical Forest Soil	MNFFIDYFKLIDILALAALAALACAALVRNKSVWLFVAVILLVIWGATRIMGWP*
Ga0126382_106624892	3300010047	Tropical Forest Soil	MNFFVEYFKLIDFLALAALAALACAAFVRNRSVWLFLAGILVAIWGAMRIISLP*
Ga0126382_110538911	3300010047	Tropical Forest Soil	PQHRRVLMNFFIEYFKLIDLLALAALAALACAALVRSGTVWLSVAGILVAIWGAMRVLGWP*
Ga0126382_111766862	3300010047	Tropical Forest Soil	MNFFIEYFKLIDLLALAALACAALVRNASVWLFVAGILVAIWGAMRILGWP*
Ga0126370_100489342	3300010358	Tropical Forest Soil	MNIFIEYFKLIDLLALAALAALACAALVRNGSIWLFVAAILVAIWGAMRVMGWP*
Ga0126370_105649482	3300010358	Tropical Forest Soil	RGDFFIEYFKLIDLLALAALAALACAALVRNGSVWLFVVGILVAIWGAMRVMGWP*
Ga0126376_112344363	3300010359	Tropical Forest Soil	VNFFVEYFRLIDFLALAALAALACAALVRNRSIWLFVAAILVAIWGAMRIISL
Ga0126376_123342291	3300010359	Tropical Forest Soil	MNFFIEYFKLIDLLALAALVVLACAALVRNGSVWLFVAGILVAIWGAMRIMGWP*
Ga0126377_100324943	3300010362	Tropical Forest Soil	MRVVIEYFKLIDLLALLALAVLAFAALRRTGSVWLFVSGILIAIWGAMRLLGWP*
Ga0126377_102399781	3300010362	Tropical Forest Soil	MKFFVDYFKLIDLLALAALAALACAALVRNRSVWLFVAGILVAIWGAMGVMGWP*
Ga0126377_108943862	3300010362	Tropical Forest Soil	RLIDLLALLALAVLAFAALRRTGSVWLFVSGILIAIWGAMRLLGWP*
Ga0126377_123651292	3300010362	Tropical Forest Soil	MQFFVEYFKLIDLLALAALAALACAALVRNRSVWLFVAVILVAIWGAMRIMGWP*
Ga0126379_109733993	3300010366	Tropical Forest Soil	MNFFIEYFKLIDLLALAALAALACAALVRNGTVWLSVAGILVAIWGAMRVIGWR*
Ga0126379_123438262	3300010366	Tropical Forest Soil	LTNFFVEYFKLIDLLALAALAVLACAALVRNRSVWLFVAGILVAIWGAMRIMGWP*
Ga0126383_106470004	3300010398	Tropical Forest Soil	MNFFVQYFKLIDVLALAALAALACAALVRNRSVWLFVAGILVAIWGAMRIMSWP*
Ga0126383_111568161	3300010398	Tropical Forest Soil	MNFFIEYFKLIDLLALAALAALACAALVRNGSVWLFVAGILVAIWGAMRVMGWP*
Ga0126383_128656731	3300010398	Tropical Forest Soil	HRRVLMNFFIDYFKLIDILALAALAALACAALVRNKSVWLFVAVILLVIWGATRIMGWP*
Ga0154003_10129712	3300012081	Attine Ant Fungus Gardens	MARFLADYFKAIDLLALAALAALACAALVRNRSVWLCIAGLLVAFWGALRVLGWP*
Ga0137382_105888211	3300012200	Vadose Zone Soil	MNFFVEYFKLIDLLALAALAALACAALVRNRSVWLFVAGILVAIWGAMRIMGWP*
Ga0137358_100362535	3300012582	Vadose Zone Soil	MNSFIEYLKLIDFLALAALAALACAALVRNRSVWLFVAGILLAIGGAMRIAGWP*
Ga0137358_101818912	3300012582	Vadose Zone Soil	MNFLVEYLKLIDLLALAALAALACAALVRNRSVWLFVAVILVAIWGAMRIMGWS*
Ga0126375_108040511	3300012948	Tropical Forest Soil	MSFFIEYFKLIDLLALAALAALACAALVRSGTVWLSVAGILVAIWGAMRVLGWP*
Ga0126375_111179122	3300012948	Tropical Forest Soil	ILGSSRRCRSAGELNFFIEYFKLIDLLALAALAALACAALVRNGSVWLFLAGILAAIWGTMRVMGWP*
Ga0126369_123759051	3300012971	Tropical Forest Soil	MNFFVEYFKLIDLLALAALAALACAAFIRNRSVWLFVAGILVVIWGAMRITGWP*
Ga0075313_11001142	3300014267	Natural And Restored Wetlands	MGFIAEYFKLIDLLALAALAALACAALVRSGSVWLFVAGILVAIWGAVRVLGLS*
Ga0157379_116863652	3300014968	Switchgrass Rhizosphere	MSTFLIDYFKAIDLLALAGLAALACAALFRNGNVWLFIAGVIVAIWGTMRELGWP*
Ga0157376_120516802	3300014969	Miscanthus Rhizosphere	MGLIAEYFRLIDLLALAALAALACAAFVRTRSVWLFVAGICVAIWGAIRVMGFS*
Ga0132258_102066896	3300015371	Arabidopsis Rhizosphere	MNFFIEYFKLIDLLALGALAALACAALVRNGSVWLFVAGILVAIWGAMRVIGWP*
Ga0132258_120264782	3300015371	Arabidopsis Rhizosphere	MNFLVDYLKLIDLLALIALAALACAALVRNRSVWLFGGNFGGNLGRHADHGLALKWLIA*
Ga0182032_101026251	3300016357	Soil	LIDLLALAALAALACAALVRNGSVWLFVAGILVAIWGAMRVMGWP
Ga0182040_105029012	3300016387	Soil	DLLALAALAALACAALVRNGSVWLFVAGILVAIWGAMRVMGWP
Ga0187777_112941091	3300017974	Tropical Peatland	MNFFVEYFKLIDLLALAALAALACAALVRNRSIWLFTAGILVAIWGAMRVMGWP
Ga0187766_106069171	3300018058	Tropical Peatland	MNFFIEYFKLIDLLALAALAALASAALVRNGSVWLFVAGILVVIWGAMRVMGWP
Ga0066667_101069732	3300018433	Grasslands Soil	MNFLVEYLKLIDLLALAALAALACAALVRNRSVWLFVAVILVAIWGAMRIMGWP
Ga0066667_123207461	3300018433	Grasslands Soil	MNFFVEYFKLIDLLALAALAVLACAALVRNRSVWLFVAGILVAIWGAMRIMGWP
Ga0190270_106819942	3300018469	Soil	MDFIVEYFKLIDLLALAALAALACAALVRSGSVWLFVAGILVAVWGAVRVLGFS
Ga0190270_108154231	3300018469	Soil	QDGRAAMGFIAEYFKLIDLLALAALGALACAALVRSGSVWLFVAGILVAIWGAVRVLGLS
Ga0210399_114829581	3300020581	Soil	MNFFIEYFKLIDLLALAALAALAFAALVRNGSVWLFVAGILVVIWGAMRVMGWP
Ga0210380_100225832	3300021082	Groundwater Sediment	MGLIVEYFRLIDLLALAALVALACAAFVRNRSVWLFVAGISVAIWGTLRAMGLS
Ga0210408_112338743	3300021178	Soil	IDLLALAALAALAFAALVRNGSVWLFVAGILVVIWGAIRVMGWP
Ga0213874_103539212	3300021377	Plant Roots	MNFLVDYLKLIDLLALAALAALACAALVRNGCVWLFVAVILVAIWGAMRILGWP
Ga0126371_100642177	3300021560	Tropical Forest Soil	VNFFIEYFKLIDLLALAALAALACAALVRNGSVWLFLAGILAAIWGTMRVMGWP
Ga0126371_108203001	3300021560	Tropical Forest Soil	MNFFIEYFKLIDLLALAALAALACAALVRNGSIWLFVAAILVAIWGAMRVMGWP
Ga0126371_121382682	3300021560	Tropical Forest Soil	MNFLIEYFKLIDLLALAALAALACAVLVRNRSVWLFVAGTLVAVWGAMRIMGWP
Ga0207708_117397131	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	MGLIAEYFRLIDLLALAALAALACAAFVRNRNVWLFVAGISVAIWGTVRVMGLS
Ga0209057_11987441	3300026342	Soil	MNFLVEYLKLIDLLALAALAALACAALVRNRSVWLFVAVILVAIWGRDADHGLALK
Ga0209814_100173092	3300027873	Populus Rhizosphere	MNFFVEYFKLIDLLALAALAALACAALVRTGSVWLFVAGILVAIWGAMRIMGWP
Ga0209814_104424612	3300027873	Populus Rhizosphere	IDFLALAGLAALACAALIRNGSVWLFVAGILVAIWGTMRVMGWP
Ga0209465_101445212	3300027874	Tropical Forest Soil	FKLIDLLALLALAVLAFVALRRTGSVWLFVSGILIAIWGAMRLLGWP
Ga0209481_102648561	3300027880	Populus Rhizosphere	MSLMVEYFKLIDLLALAALASLACAALVRNGSVWLFVAGLLVAAWGTMRVVGWP
Ga0207428_104201903	3300027907	Populus Rhizosphere	MTTFLVDYFKAIDLLALAGLAALACAALFRSGSVWLFIAGDIVAIWGTMRVLGWP
Ga0209382_100056131	3300027909	Populus Rhizosphere	MSFFIDYFKLIDFLALAGLAALACAALIRNGSVWLFVAGILVAIWGTMRVMGWP
Ga0268264_112809591	3300028381	Switchgrass Rhizosphere	MSTFLIDYFKAIDLLALAGLAALACAALFRNGNVWLFIAGVIVAIWGTM
Ga0247822_105694152	3300028592	Soil	MGFFVEYFKLIDLLALAALAALACAALVRNGSVWLCVAGILVATWGAVRVMGLS
Ga0307289_104499341	3300028875	Soil	RRVLMNFFVEYFKLIDLLALAALAVLACAALVRNRSVWLFVAGILVAIWGAMRIMGWP
Ga0307278_102849002	3300028878	Soil	KLIDLLALAALAALACAALVRTRSVWLFVAGILVAIWGAMRIMGWP
Ga0318541_105665521	3300031545	Soil	MNFFIEYFKLIDLLALAALAALACAALVRNGSVWLFVAGILVAIWGAMRVMGWP
Ga0310915_101547381	3300031573	Soil	MNFFIEYFKLIDLLALAALAALACAALVRNGSVWLFVAGILVAIWGAMRVMGW
Ga0307468_1008703752	3300031740	Hardwood Forest Soil	MSVVIEYFKLIDFLALLALAVLAFAALRRTGSVWLLVSGVLIAIWGTMRLLGWP
Ga0307468_1019808532	3300031740	Hardwood Forest Soil	MSVVVEYFKIIDLLALLALAVLAFAALRRNGSVWLFVSGVLIVIWGAMRIL
Ga0306919_103473212	3300031879	Soil	ALAALACAALVRNGSVWLFVAGILVAIWGAMRVMGWP
Ga0306920_1013577792	3300032261	Soil	MNFFIEYFKLIDLLALAALAALACAALLRNGNVWLFVAGILVAIWGAMRVMGWP
Ga0335077_119893261	3300033158	Soil	MNFFVEYFKLVDLLALGALVALACAALVRNGSVWLFVAGISVAIWGAMRVIGWP

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F050015

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences