Metagenome / Metatranscriptome Family F050534

Basic Information
Family ID	F050534
Family Type	Metagenome / Metatranscriptome
Number of Sequences	145
Average Sequence Length	43 residues
Representative Sequence	VEEVTDEPLYRDRVCGIDIGKAGMAATIRVPSDKDPARRA
Number of Associated Samples	135
Number of Associated Scaffolds	145

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	100.00 %
% of genes near scaffold ends (potentially truncated)	1.38 %
% of genes from short scaffolds (< 2000 bps)	1.38 %
Associated GOLD sequencing projects	132
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.41

Most Common Taxonomy
Group	Unclassified (99.310 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (17.241 % of family members)
Environment Ontology (ENVO)	Unclassified (24.138 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (43.448 % of family members)

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 5.88% β-sheet: 29.41% Coil/Unstructured: 64.71%
Feature Viewer

Powered by Feature Viewer

Pfam ID	Name	% Frequency in 145 Family Scaffolds
PF02371	Transposase_20	9.66
PF00903	Glyoxalase	1.38
PF00589	Phage_integrase	1.38
PF00248	Aldo_ket_red	1.38
PF00196	GerE	0.69
PF14104	DUF4277	0.69
PF02945	Endonuclease_7	0.69
PF00440	TetR_N	0.69
PF03050	DDE_Tnp_IS66	0.69
PF12796	Ank_2	0.69
PF09107	SelB-wing_3	0.69
PF09346	SMI1_KNR4	0.69
PF13565	HTH_32	0.69
PF00011	HSP20	0.69
PF08388	GIIM	0.69
PF14333	DUF4389	0.69
PF03435	Sacchrp_dh_NADP	0.69
PF00208	ELFV_dehydrog	0.69
PF01381	HTH_3	0.69
PF13546	DDE_5	0.69
PF01348	Intron_maturas2	0.69
PF04672	Methyltransf_19	0.69
PF03575	Peptidase_S51	0.69
PF13751	DDE_Tnp_1_6	0.69
PF11716	MDMPI_N	0.69
PF02518	HATPase_c	0.69
PF01548	DEDD_Tnp_IS110	0.69
PF05724	TPMT	0.69
PF13185	GAF_2	0.69

COG ID	Name	Functional Category	% Frequency in 145 Family Scaffolds
COG3547	Transposase	Mobilome: prophages, transposons [X]	10.34
COG0071	Small heat shock protein IbpA, HSP20 family	Posttranslational modification, protein turnover, chaperones [O]	0.69
COG0334	Glutamate dehydrogenase/leucine dehydrogenase	Amino acid transport and metabolism [E]	0.69
COG2902	NAD-specific glutamate dehydrogenase	Amino acid transport and metabolism [E]	0.69
COG3436	Transposase	Mobilome: prophages, transposons [X]	0.69

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.31 %
All Organisms	root	All Organisms	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.31 %
cellular organisms	root	All Organisms → cellular organisms	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.31 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.31 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.31 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.31 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.31 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	0.69 %

Scaffold	Taxonomy	Length	IMG/M Link
3300012211\|Ga0137377_10455820	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	1217	Open in IMG/M
3300025942\|Ga0207689_10333061	Not Available	1261	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	97.93%
Host-Associated	Host-Associated	2.07%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	86.21%
Aquatic	Environmental → Aquatic	11.72%
Plants	Host-Associated → Plants	2.07%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	81.38%
Freshwater	Environmental → Aquatic → Freshwater	10.34%
Peat	Environmental → Terrestrial → Peat	4.14%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.38%
Non-Marine Saline And Alkaline	Environmental → Aquatic → Non-Marine Saline And Alkaline	0.69%
Sediment	Environmental → Aquatic → Sediment	0.69%
Rock-Dwelling (Subaerial Biofilms)	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms)	0.69%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.69%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	61.38%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	12.41%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	10.34%
Loam	Environmental → Terrestrial → Soil → Loam	7.59%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	4.14%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.38%
Hypersaline	Environmental → Aquatic → Non-Marine Saline And Alkaline → Hypersaline	0.69%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.69%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified	0.69%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.69%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	33.10%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	22.07%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	12.41%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	6.90%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	5.52%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.14%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	4.14%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.45%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	2.76%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.38%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.69%
Sediment	Environmental → Aquatic → Non-Marine Saline And Alkaline → Hypersaline → Sediment	0.69%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.69%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.69%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified	0.69%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.69%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	17.24%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	13.79%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	7.59%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	6.90%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	4.83%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	4.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.14%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	4.14%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.45%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.76%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.76%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	2.76%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	2.07%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.07%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.38%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.38%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grass Soil	1.38%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.38%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.38%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	1.38%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.69%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	0.69%
Hypersaline Lake Sediment	Environmental → Aquatic → Non-Marine Saline And Alkaline → Hypersaline → Sediment → Hypersaline Lake Sediment	0.69%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.69%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.69%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.69%
Switchgrass, Maize And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Switchgrass, Maize And Miscanthus Rhizosphere	0.69%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.69%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.69%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.69%
Exposed Rock	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified → Exposed Rock	0.69%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.69%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.69%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.69%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2044078000	Maize field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL	Environmental	Open in IMG/M
2170459024	Grass soil microbial communities from Rothamsted Park, UK - FD1 (NaCl 300g/L 5ml)	Environmental	Open in IMG/M
2189573004	Grass soil microbial communities from Rothamsted Park, UK - FG2 (Nitrogen)	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001867	Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)	Environmental	Open in IMG/M
3300002910	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_80cm	Environmental	Open in IMG/M
3300002914	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm	Environmental	Open in IMG/M
3300005339	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG	Host-Associated	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005553	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144	Environmental	Open in IMG/M
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009520	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_1_NS metaG	Environmental	Open in IMG/M
3300009521	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaG	Environmental	Open in IMG/M
3300009547	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_40	Environmental	Open in IMG/M
3300009683	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_b_LC metaG	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300009824	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaG	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015	Environmental	Open in IMG/M
3300010336	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300014487	Bulk soil microbial communities from Mexico - Magueyal (Ma) metaG	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300016750	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300017822	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2	Environmental	Open in IMG/M
3300017924	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_5	Environmental	Open in IMG/M
3300017925	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_40	Environmental	Open in IMG/M
3300017927	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_4	Environmental	Open in IMG/M
3300017928	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_1	Environmental	Open in IMG/M
3300017932	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_4	Environmental	Open in IMG/M
3300017939	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_10_MG	Environmental	Open in IMG/M
3300017942	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_3	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017963	Hypersaline lake sediment archaeal communities from the Salton Sea, California, USA - SS_3_D_1 metaG	Environmental	Open in IMG/M
3300017966	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MG	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300017999	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP10_10_MG	Environmental	Open in IMG/M
3300018007	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_5	Environmental	Open in IMG/M
3300018034	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_10	Environmental	Open in IMG/M
3300018058	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MG	Environmental	Open in IMG/M
3300018060	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MG	Environmental	Open in IMG/M
3300018062	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018064	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_10_MG	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300020610	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021374	Barbacenia macrantha exposed rock microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - ER_R08	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300024271	Soil microbial communities from Bohemian Forest, Czech Republic ? CSU5	Environmental	Open in IMG/M
3300024288	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026300	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cm (SPAdes)	Environmental	Open in IMG/M
3300026325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107 (SPAdes)	Environmental	Open in IMG/M
3300026475	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-12-A	Environmental	Open in IMG/M
3300026507	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-12-B	Environmental	Open in IMG/M
3300026555	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300026817	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 17 (SPAdes)	Environmental	Open in IMG/M
3300026844	Soil and rhizosphere microbial communities from Laval, Canada - mgLAA (SPAdes)	Environmental	Open in IMG/M
3300026920	Forest soil microbial communities from Willamette National Forest, Oregon, USA, amended with Nitrogen - NN397 (SPAdes)	Environmental	Open in IMG/M
3300027824	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300028710	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_380	Environmental	Open in IMG/M
3300028779	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_E1_2	Environmental	Open in IMG/M
3300028789	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N2_3	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300029951	III_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300030056	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E3_3	Environmental	Open in IMG/M
3300030618	II_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300031226	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_S	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031788	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_2	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031860	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f25	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300032008	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f18	Environmental	Open in IMG/M
3300032067	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f22	Environmental	Open in IMG/M
3300032089	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f23	Environmental	Open in IMG/M
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300032954	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.2	Environmental	Open in IMG/M
3300033134	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M
3300033475	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YC	Environmental	Open in IMG/M
3300034163	Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_04D_14	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
ZMB_2292850	2044078000	Switchgrass, Maize And Miscanthus Rhizosphere	VEEVTDEPLYRDRVCGIDIGKAGMAATIRVPSDRDPARRPARPAASRPRT
FD1_05512400	2170459024	Grass Soil	VEEVTDEPLYRDRVCGIDIGKAGMVATIRVPSDRDPA
FG2_07882170	2189573004	Grass Soil	VTDEPLYRDRVCGIDIGKAGMVATIRVPSDRDPARRMQE
INPhiseqgaiiFebDRAFT_1015173701	3300000364	Soil	MEEVADEPLYRDRVCGIKIGKAGIVATIRVPSDKDPARRVAETRSFGIT
JGI10216J12902_1098510781	3300000956	Soil	VEEVTGEPLHRDRVCGTGTGKAGMAAAIRVPSGKDPSRRMAETRMFGTTRREVLALAGWLRCWQ
JGI12627J18819_102619511	3300001867	Forest Soil	MEEVTDEPLYRDRVCGIDIGKAELYATIRVPSDKD
JGI25615J43890_10909242	3300002910	Grasslands Soil	VDEVTDEPLYRDRVCGIDIGKAELYATIRVPSENNPARRAA
JGI25617J43924_100207591	3300002914	Grasslands Soil	VDEVTDEPLYRDRVCGIDIGKAELYATIRVPSENNPARRA
Ga0070660_1012344741	3300005339	Corn Rhizosphere	VEEVTGEPLHRDRVCDTGIGKAEMYATIRVPSEKNPARRASETRSFATTKRGVLAL
Ga0070681_102661031	3300005458	Corn Rhizosphere	VEEVTGEPLHRDRVCGTGIGKAEMYATIRVPSEKNPAWRASETRSFATTKRGVLALADWL
Ga0070706_1000278201	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MEEVTGGPLYRDRVCGIGIGKAELYATIRVPSDSNPARRASGTRRFAATRRGVLAL
Ga0066695_108054021	3300005553	Soil	VRRVEEVTDEPLYRDRVCGIDIGKAQMVATIRVPSDRDLARRM
Ga0068852_1013637761	3300005616	Corn Rhizosphere	VEEVTGEPLHRDRVCGTGIGKAEMYATIRVPSEKNPARR
Ga0066903_1054529332	3300005764	Tropical Forest Soil	MRSRPRTSPLYRSRVCGVDVGKAELYATIRVPSDGNPARRASETRRFA
Ga0075017_1001693091	3300006059	Watersheds	VEEVTDEPLYRDRVCGIDIGKAGMVATIRVPSDKD
Ga0070712_1012381992	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MEEVTDEPLYRDRVCGIDIGKAGMVATIRVPSDKDPARRM
Ga0099830_111143271	3300009088	Vadose Zone Soil	VEEVTDEPLHRDRVCGIDIGKAGMVVTIRVPSDANPARR
Ga0116214_10047681	3300009520	Peatlands Soil	VDEVTDEPLYRDRVCGIDIGKAQMAATIRVPSDKDPARRMAETR
Ga0116222_11070561	3300009521	Peatlands Soil	MRGDEMTDEPLYRNRVCGIDIGKAQMVATIRVPSDRDPARRAAETRTFATTK
Ga0116136_10652651	3300009547	Peatland	VEEVTDEPLYRDRVCGIDIGKAGMAATIRVPSDKDPARRAAE
Ga0116224_102907631	3300009683	Peatlands Soil	MRERSGEQRVEEVTDEPLYRDRVCGIDIGKAGLVATIRVPSDRDP
Ga0126374_115060491	3300009792	Tropical Forest Soil	VEEVTGGPLYRDRMCGIDIGKAAMVATIRVPSESN
Ga0116219_101130801	3300009824	Peatlands Soil	MEEVTDEPLYRDRVCGIDIGKAQLYATIRVPSDGNPARRASETRS
Ga0126373_123594232	3300010048	Tropical Forest Soil	VEEVRDEPLYRDRVCGIDIGKAQLYATIRVPSDANPARRASETREVAIT
Ga0134063_106112772	3300010335	Grasslands Soil	VEDVRDEPLYRSRVCGIDVGKAELYATIRVPSDGNPARRASETRRFATT
Ga0134071_103294121	3300010336	Grasslands Soil	VEEVTDEPLYRDRVCGIDIGKAEMHATIRVPSDANPARRMSETR
Ga0126376_124105511	3300010359	Tropical Forest Soil	VDEVADEPLYRDRVCGIDIGKAGMAATIRVPSEKDPLRRASETRLFPATR
Ga0126372_131793702	3300010360	Tropical Forest Soil	VEDVRDEPLYRSRVCGVDVGKAELYATIRVPSDGNPARRASETRRFATTR
Ga0126378_115361592	3300010361	Tropical Forest Soil	VEEVTGEPLYRDRVCGIDIGKAEMHATIRVPSEANPARRAAETRSFATT
Ga0126381_1030727052	3300010376	Tropical Forest Soil	VEDVTDEPLYRDRVCGIDIGKAGMAATIRVPSDKDPLRRAQET
Ga0136449_1031732701	3300010379	Peatlands Soil	MEEVTDEPLYRDRVCGIDIGKAQLYATIRVPSDGNP
Ga0136449_1038139761	3300010379	Peatlands Soil	MRERSGEGRVEEVTDEPLYRDRVCGIDIGKAQMVATIRVPSDRDPAR
Ga0134126_122871591	3300010396	Terrestrial Soil	VEEVTDEPLYRDRACCIDIGKAQMAATIRVPSDSNPARRASETRSLGTTKRE
Ga0137392_111406731	3300011269	Vadose Zone Soil	VDEVTDEPLYRDRVCGIDIGKAGMAATIRVPSDRDPARRAAETRS
Ga0137364_101343902	3300012198	Vadose Zone Soil	VEDVRDEPLYRSRVCGIDVGKAELYATIRVPSDGNP
Ga0137383_103933642	3300012199	Vadose Zone Soil	MEEVTGEPLYRDRVCGIDIGKAELYATIRVPSDSNPARRASETRRFAATR*
Ga0137399_103041322	3300012203	Vadose Zone Soil	MEEVTDEPLYRDRVCGTGIGKAQLYATIRVPSDQNPARRASETRSFGTTK*
Ga0137376_100930104	3300012208	Vadose Zone Soil	MEEVTDEPLYRDRVCGIDIGKAGLVATIRVPSEKDPARRS*
Ga0137379_109566951	3300012209	Vadose Zone Soil	MEEVTGEPLYRDRVCGIDIGKAELYATIRVPSDKNPARRASETRS
Ga0137379_111412091	3300012209	Vadose Zone Soil	VEDVRDEPLYRSRVCGIDVGKAELYATIRVPSDNDPARR
Ga0137378_101280301	3300012210	Vadose Zone Soil	MEEVTDEPLYRDRVCGTGIGKAEMYATIRVPSETN
Ga0137378_105739572	3300012210	Vadose Zone Soil	MEEVTDEPLYRDRVCGTGIGKAELYATIRVPSDSNPARRASETRRFAATR*
Ga0137378_106105211	3300012210	Vadose Zone Soil	VEEVTDEPLYRDRVCGTGIGKTEMHATIRVPSDTNPERRMSETRAFATTKRGV
Ga0137378_106892841	3300012210	Vadose Zone Soil	MRVDEVTDEPLYRDRVCGIDIGKAGMAATIRVPSERDPSRRAAETR
Ga0137377_103850182	3300012211	Vadose Zone Soil	MEEVTGEPLYRDRVCGTGIGKAELYATIRVPSDSNPARRASETRRFAATR*
Ga0137377_104558203	3300012211	Vadose Zone Soil	MEEVTDEPLYRDRVCGIDIGKAQMVATIRGPSDRDPSRRMQYSRGSGTTKRE
Ga0137386_102150242	3300012351	Vadose Zone Soil	VDEVTDEPLYRDRVCGIDIGKAELYATIRVPSDKDPAR
Ga0137360_111212311	3300012361	Vadose Zone Soil	MEEVTDEPLYRDRVCGIDIGKAELYATIRVPSDKNPARRAS
Ga0137410_109727472	3300012944	Vadose Zone Soil	MRERSGEGQVQEVTGEPRYRDRVCGIDIGRAGLVATIRVPSDRDPARR
Ga0126369_135440121	3300012971	Tropical Forest Soil	MDEVTDEPLYRDRVCGIDIGKAGLAATIRVPSEENPARRASETRLFPAT
Ga0164306_105957161	3300012988	Soil	VDEVGDEPLYRDRVCGIDIGKAGMAVTIRVPSGKNPGRRMAETRTFGTTRREVLALA
Ga0182000_101138402	3300014487	Soil	VDEVTDEPLYRDRVCGIDIGKAQMVATIRVPSDRDPARRASET
Ga0137403_108931682	3300015264	Vadose Zone Soil	VEEVTDEPLYRDRVCGIDIGKAGKVAPIRVPSDGDAARRAAETRGLGTT
Ga0182033_112771382	3300016319	Soil	VDEVTDEPLYRDRVGGIDIGKAEMYATIRVPSGKNPAR
Ga0182038_106793171	3300016445	Soil	MEEVTDEPLYRDRVCGIDIGKAGLVATIRVPSGRDPARRA
Ga0181505_108577652	3300016750	Peatland	MEEVTDEPLYRDRVCGIDIGKAELYATIRVPSDKDPARRASET
Ga0187802_101178232	3300017822	Freshwater Sediment	VEEVTEEPLYRDRVCGIDIGKAQMLATIRVPADKDPARRAQET
Ga0187802_104440271	3300017822	Freshwater Sediment	MEEVTDEPLYRDRVCGIDIGKAELYATIRVPSDKDPARRASE
Ga0187820_11988162	3300017924	Freshwater Sediment	VDEVSDEPLYRDRVCGIDIGKAQMAATIRVPSDRDPARRSAETRTFATTK
Ga0187856_13215061	3300017925	Peatland	VEEVTDEPLYRDRVCGIDIGKAGMAATIRVPSDKDPARRA
Ga0187824_103392201	3300017927	Freshwater Sediment	VTDEPLYRDRVCGIDIGKAGLYATIRVPSDSNPARRASET
Ga0187806_12272941	3300017928	Freshwater Sediment	VEEVTDEPLYRDRVCGIDIGKAQMVATIRVPSDKDPARR
Ga0187814_102550121	3300017932	Freshwater Sediment	VDEVSDEPLYRNRVCGIDIGKAQMVATIRVPSDRDPV
Ga0187775_105335191	3300017939	Tropical Peatland	VEEVTDEPLYRDRVCGIDIGKAGMVATIRVPSDPNQRIER
Ga0187808_101183392	3300017942	Freshwater Sediment	MEEVTGEPLYRDRVCGIDIGKAGMVATIRVPSDKDPSRRAQ
Ga0187817_104069051	3300017955	Freshwater Sediment	VEEVTDEPLYRDRACGIDIGKAGMVATIRVPSGKDPARRAAE
Ga0187817_104109881	3300017955	Freshwater Sediment	MEEVTDEPLYRDRVCGIDIGKAQMVATIRVPSDKDPSR
Ga0180437_109885462	3300017963	Hypersaline Lake Sediment	VEEVTDEPLYRDRVCGIDIGKAELYATIRVPSEKNPARRAAE
Ga0187776_100950211	3300017966	Tropical Peatland	VEEVIDEPLYRDRVCGIDIGKAGLVATIRVPSEKDPA
Ga0187783_108469311	3300017970	Tropical Peatland	MEEEALEEVTDEPLCRERVCVIDIGKAVMVATIRVPSDK
Ga0187782_105596891	3300017975	Tropical Peatland	VEEVTDEPLYRDRVCGIDIGKAGLVATIRVPSDRDPAR
Ga0187767_101671501	3300017999	Tropical Peatland	VEEVTDEPLYRDRVCGIDIGKAQMVATIRVPSDKDPA
Ga0187805_103440161	3300018007	Freshwater Sediment	MEEVTDEPLYRNRVCGIDIGKAGMVATIRVPSDKDRSRRAAETRS
Ga0187863_101793982	3300018034	Peatland	VEEVTDEPLYRDRVCGIDIGKAGMAATIRVPSDKDP
Ga0187766_100982403	3300018058	Tropical Peatland	VEEVTDEPLYRDRVCGIDIGKAGLAATIRVPSEKNPARR
Ga0187765_109510472	3300018060	Tropical Peatland	MEEVTDEPLYRDRVCGIDIGNAGMVATIRVPSDKNRA
Ga0187784_108575921	3300018062	Tropical Peatland	VEEVTGEPLHRDRVCGIDIGKAQLVATIRVPSDRD
Ga0187773_101518361	3300018064	Tropical Peatland	VEEVTDEPLYRDRVCGIDIGKAGMAVTIRVPSDRDPARRASETR
Ga0187773_108066101	3300018064	Tropical Peatland	VEEVTDEPLYRDLVCGIDSGKAAMVATIRVPSDKDPSRRAQETRSFGTTKKEALALA
Ga0187772_102970582	3300018085	Tropical Peatland	VEEVTDEPLYRDRVCGVDIGKAEMHATIRVPSDENPQRRMSETR
Ga0210407_101499671	3300020579	Soil	VDEVTDEPLYRDRVCGIDIGTAQMVATIRVPSDRNPARRMAETRTF
Ga0210399_101550722	3300020581	Soil	VEDVRDEPLYRSRVCGIDVGKAELYATIRVPSDGNPARRASETRRF
Ga0210401_111115421	3300020583	Soil	VDEVTDEPLYRDRVCGIDIGKAQMVATIRVPSDRDPA
Ga0154015_12622333	3300020610	Corn, Switchgrass And Miscanthus Rhizosphere	VEEVTDEPLYRDRVCGIDIGKAEMYATIRVPSEANPARRAQ
Ga0213881_100261943	3300021374	Exposed Rock	VEEVTDEPLYRDRVCGIDIGKAGMAVTIGVPPDKDPARRASETRGFGTTKREV
Ga0210389_107655652	3300021404	Soil	VDEVRDEPLHRDRVCGIDIGKSGMAATIRVPSDRD
Ga0210394_108892591	3300021420	Soil	VEEVTDEPLYRDRVCGIDIGKAGMVATIRVPSDKDPARRMAG
Ga0224564_11168541	3300024271	Soil	VEEVTDEPLYRDRVCGIDIGKAQMVATIRVPSDRDPARRAAETGTFA
Ga0179589_103958752	3300024288	Vadose Zone Soil	VEEVTDEPLYRDRVCGIDIGKAEMHATIRVPSDANPARRM
Ga0207692_110794691	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	VEDVRDEPLYRSRVCGIDVGKAELYATIRVPSDDNPAWRASETRRFATTKR
Ga0207663_107803992	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	VVEEARVDEVTDEPLYRDRVCGIDIGKAGMAATIRVPSDRDRSRR
Ga0207700_111355362	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	VEEVTDEPLYRDRVCGIDIGKAGMAATIRVPSDRDP
Ga0207689_103330611	3300025942	Miscanthus Rhizosphere	VEEVTDEPLYRDRVCGIDIGKAQMAATIRVPSDSNP
Ga0209027_12380911	3300026300	Grasslands Soil	VEEVTDEPLYRDRVCGIDIGKAGLVATIRVPSDRDRSRRAAET
Ga0209131_10816401	3300026320	Grasslands Soil	VRPVDEVTDEPLYQDRVCGIDIGKAEMYATIRVPSDTNPQ
Ga0209152_103938411	3300026325	Soil	VDEVTDEPLYRDRVCGIDIGKAQLVATIRVPSDRDPARRMAETRT
Ga0257147_10487652	3300026475	Soil	MEEVTDEPLYRDRVCGIDIGKAQIAATIRVPSEKNP
Ga0257165_10774031	3300026507	Soil	VRDAEEVTDEPLYRDRVCGIDIGRAGLVATIRVSSDRDPARRMRE
Ga0179593_10266271	3300026555	Vadose Zone Soil	LEEVTDEPLYRDRVCGIDIGKAGMAATIRVPSDKDPARRASENPRVRHH
Ga0207775_1161752	3300026817	Tropical Forest Soil	VEEITDEPLYRDRVCGVDIGKAGMVATIRVPSDRDPARR
Ga0208760_1005972	3300026844	Soil	MEEVTDEPLYRDRVCGIDIGKAGMAATIRVPSDANP
Ga0208575_10222281	3300026920	Soil	MEEVTDEPLYRDRVCGIDIGKAGLYATIRVPSDSNPARRA
Ga0209040_100253147	3300027824	Bog Forest Soil	MRERSGEGRVEEVTGEPLYRDRVCGIDIGKAGLVATIRVPSDRDPAR
Ga0209006_108400562	3300027908	Forest Soil	VDEVTDEPLHRDRVCGIDIGKAVMAVTVRVPSDRDP
Ga0307322_101282021	3300028710	Soil	VEEVTDEPLYRDRVCGIDVGKAQMVATIRVPSDRDPARRA
Ga0302266_103446261	3300028779	Bog	VEEVSDEPLYRDRVCGIDIGKAGMAATIRVPSDKDPARR
Ga0302232_105435421	3300028789	Palsa	VDEVTDEPLYRDRVCGIDIGKAQIAATIRVPSDRDP
Ga0307312_111700161	3300028828	Soil	VEEVTDEPLYRDRVCGIDVGKAQMVATIRVPSDRDPARR
Ga0311371_112131231	3300029951	Palsa	VEEVSDEPLYRDRVCGIGIGKAGMAATIRVPSDKDPARRAAGT
Ga0302181_100326936	3300030056	Palsa	MDEVTDEPLYRDRVCGIDIGKAQMVATIRVPSDSNPAR
Ga0311354_113399361	3300030618	Palsa	MEEVTDEPLYRDRVCGIDIGKAQLYATIRVPSDGNPARRASETRSF
Ga0307497_106153901	3300031226	Soil	VDEVTGGPLYRDRVGGTGTGTAGLAATIRVPSDRDPARRVAETRSFGAAKKE
Ga0318516_107444251	3300031543	Soil	VEEVTDEPLYRDRVCGIDIGKAQMVATIRVPSDRDPARRSAETRIFA
Ga0318541_108563571	3300031545	Soil	VDEVTGEPLYRDRVCGIDIGEAGLVATIRVPSEKNPARRAAGTRS
Ga0318538_104699732	3300031546	Soil	MEEVTDEPLYRDRVCGIDIGKAAMVATIRVPSDNNPARRA
Ga0318528_101311301	3300031561	Soil	MDEVTDEPLYRDRVCSIDIGKAGMAATIRVPPDKNPSRRA
Ga0318542_101122731	3300031668	Soil	VEEVTDEPLYRDRVCGIDIGKAGMVATIRVPSDRDRSRRAA
Ga0307476_109743871	3300031715	Hardwood Forest Soil	MEEVTDEPLYRDRVCGIDIGKAEMYATIRVPSERDPA
Ga0318500_100768131	3300031724	Soil	VQEVTGEPLYRDRVCGIDIGKAELYATIRVPSDKNPARRASETR
Ga0318501_100738501	3300031736	Soil	VEEVTDEPLYRDRVCGIDIGKAQMVATIRVPSDKDPARRVSW
Ga0307477_108903911	3300031753	Hardwood Forest Soil	VRNVEEVTDEPLYRDRVCGIDIGKAQVAATIRAPSETNPARR
Ga0318546_103170073	3300031771	Soil	VEEVTDEPLYRDRVCGIDIGKAGMAATIRVPSGRDRSR
Ga0318547_106576872	3300031781	Soil	VDEVTDEPLYRDRVCGVDIGKAAMVATIRVPSDADPARRMAETR
Ga0302319_108900751	3300031788	Bog	VEEVSDEPLYRDRVCGIGIGKAGMAATIRVPSDKDPARRAAETRSFGTTR
Ga0318523_105560691	3300031798	Soil	VEEVTDEPLYRDRVCGIDIGKAQMVATIRVPSDKDPAR
Ga0318495_104754261	3300031860	Soil	VEEVTDEPLYRDRVCGIDIGKAGMAATIRVPSDKNPAR
Ga0306925_104812372	3300031890	Soil	VEEVTDEPLYRDRVCGIDIGKAGLVATIRVPSDRD
Ga0318551_103293182	3300031896	Soil	MDEVTDEPLYRDRVCGIDIGKAQMVATIRVPSDRDPARRSAETRIFATTKRG
Ga0318520_105996981	3300031897	Soil	MEEVTDEPLYRDRVCGIDIGKAQMVATIRVPSEKDPARRAAETRSFGT
Ga0306923_121121191	3300031910	Soil	VEEITDEPLYRDRVCGVDLGKAGLVATIRVPSDANPA
Ga0310916_101148343	3300031942	Soil	MRERSGGQRVEEVTDEPLYRDRVCGIDIGKAGLAATIRVPSDRDP
Ga0318562_101276321	3300032008	Soil	VDEVTDEPLYRDRVCGIDIGKAAMAATIRVPSDADPAR
Ga0318524_107345711	3300032067	Soil	VDEVTDEPLYRDRVCGIDIGKAGLVATIRVPSERNPARRAA
Ga0318525_106526252	3300032089	Soil	VEEVAGKPLYRDRVRGVGIGKAGMVATIRVPSDRDRSPRAAETRSFGTT
Ga0318518_100660242	3300032090	Soil	VDEVTDEPLYRDRVCGIDIGKAGLVATIRVPSERDPARRAA
Ga0311301_123418392	3300032160	Peatlands Soil	MEEVTDEPLYRDRVCGIDIGKAGMVATIRVPSDKDPA
Ga0307471_1041304031	3300032180	Hardwood Forest Soil	MEEVTDEPLYRDRVCGIDIGKAQIAATIRVPSETNPA
Ga0335078_105900251	3300032805	Soil	VEEVTDEPLYRDRVCGIDIGKAGMAVTIRVPSDRDP
Ga0335080_107137582	3300032828	Soil	VTDEPLYRDRVCGIDIGKAAMAATIRVPSDKNPARR
Ga0335083_104550002	3300032954	Soil	MEEVTDEPLYRDRVCGIDIGKAQMAATIRVPSDANP
Ga0335073_120640851	3300033134	Soil	MEEVTDEPLYRDRVCGIDIGKAGMVATIRVPSDKDPSRRS
Ga0335077_113896681	3300033158	Soil	VTDEPLYRDRVCGIDIGKAQMAATIRVPSDKDPARRMQETRGFGTTKKEV
Ga0335077_120719122	3300033158	Soil	VEEVTDEPLYRDRVCGIDIGKARMAVTIRVPSDRDPARRMQET
Ga0310811_108518751	3300033475	Soil	MEEATDEPLYRDRVCGIDIGKAQLYATIRVPSDGNPARRASETRS
Ga0370515_0269510_3_116	3300034163	Untreated Peat Soil	MEEVTDEPLYRDRVCGIDIGKAGMVATIRVPSDKDPSR

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.41
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.41
Powered by PDBe Molstar

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F050534

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign