Metagenome Family F050540

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F050540
Family Type	Metagenome
Number of Sequences	145
Average Sequence Length	54 residues
Representative Sequence	MTASPEPPFGIVRVAPFAGFVHRFDDLIGSATTMALYFIHSRRWRENHDAAIKGF
Number of Associated Samples	125
Number of Associated Scaffolds	145

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	79.31 %
% of genes near scaffold ends (potentially truncated)	98.62 %
% of genes from short scaffolds (< 2000 bps)	87.59 %
Associated GOLD sequencing projects	117
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.31

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (90.345 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (25.517 % of family members)
Environment Ontology (ENVO)	Unclassified (52.414 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (66.207 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 32.53% β-sheet: 0.00% Coil/Unstructured: 67.47%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.31
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.31
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 145 Family Scaffolds
PF00312	Ribosomal_S15	10.34
PF01625	PMSR	9.66
PF14559	TPR_19	6.21
PF01641	SelR	4.83
PF13414	TPR_11	4.83
PF00580	UvrD-helicase	4.83
PF06224	HTH_42	3.45
PF14356	DUF4403	3.45
PF03932	CutC	3.45
PF00072	Response_reg	2.76
PF08546	ApbA_C	2.07
PF10282	Lactonase	2.07
PF00456	Transketolase_N	1.38
PF13462	Thioredoxin_4	1.38
PF00069	Pkinase	1.38
PF12867	DinB_2	1.38
PF02624	YcaO	0.69
PF04199	Cyclase	0.69
PF02567	PhzC-PhzF	0.69
PF13432	TPR_16	0.69
PF12695	Abhydrolase_5	0.69
PF03726	PNPase	0.69
PF01713	Smr	0.69
PF01138	RNase_PH	0.69
PF03404	Mo-co_dimer	0.69
PF13714	PEP_mutase	0.69
PF02780	Transketolase_C	0.69
PF03965	Penicillinase_R	0.69
PF08534	Redoxin	0.69
PF02735	Ku	0.69
PF02518	HATPase_c	0.69
PF05569	Peptidase_M56	0.69
PF07690	MFS_1	0.69
PF01544	CorA	0.69
PF03928	HbpS-like	0.69
PF13453	zf-TFIIB	0.69

COG ID	Name	Functional Category	% Frequency in 145 Family Scaffolds
COG0184	Ribosomal protein S15P/S13E	Translation, ribosomal structure and biogenesis [J]	10.34
COG0225	Peptide methionine sulfoxide reductase MsrA	Posttranslational modification, protein turnover, chaperones [O]	9.66
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	5.52
COG0210	Superfamily I DNA or RNA helicase	Replication, recombination and repair [L]	4.83
COG0229	Peptide methionine sulfoxide reductase MsrB	Posttranslational modification, protein turnover, chaperones [O]	4.83
COG1074	3Ã¢â‚¬â„¢-5Ã¢â‚¬â„¢ helicase subunit RecB of the DNA repair enzyme RecBCD (exonuclease V)	Replication, recombination and repair [L]	4.83
COG3973	DNA helicase IV	Replication, recombination and repair [L]	4.83
COG3142	Copper homeostasis protein CutC	Inorganic ion transport and metabolism [P]	3.45
COG3214	DNA glycosylase YcaQ, repair of DNA interstrand crosslinks	Replication, recombination and repair [L]	3.45
COG1893	Ketopantoate reductase	Coenzyme transport and metabolism [H]	2.07
COG0021	Transketolase	Carbohydrate transport and metabolism [G]	1.38
COG1185	Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase)	Translation, ribosomal structure and biogenesis [J]	1.38
COG3959	Transketolase, N-terminal subunit	Carbohydrate transport and metabolism [G]	1.38
COG0384	Predicted epimerase YddE/YHI9, PhzF superfamily	General function prediction only [R]	0.69
COG0598	Mg2+ and Co2+ transporter CorA	Inorganic ion transport and metabolism [P]	0.69
COG0689	Ribonuclease PH	Translation, ribosomal structure and biogenesis [J]	0.69
COG1273	Non-homologous end joining protein Ku, dsDNA break repair	Replication, recombination and repair [L]	0.69
COG1846	DNA-binding transcriptional regulator, MarR family	Transcription [K]	0.69
COG1878	Kynurenine formamidase	Amino acid transport and metabolism [E]	0.69
COG1944	Ribosomal protein S12 methylthiotransferase accessory factor YcaO	Translation, ribosomal structure and biogenesis [J]	0.69
COG2123	Exosome complex RNA-binding protein Rrp42, RNase PH superfamily	Intracellular trafficking, secretion, and vesicular transport [U]	0.69
COG3682	Transcriptional regulator, CopY/TcrY family	Transcription [K]	0.69

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	91.03 %
Unclassified	root	N/A	8.97 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	91.03 %
Unclassified	root	N/A	8.97 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	90.34 %
Unclassified	root	N/A	8.97 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.69 %

Name	Rank	Taxonomy	Distribution
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	20.69 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	16.55 %
Unclassified	root	N/A	8.97 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1.38 %
Euryarchaeota	phylum	All Organisms → cellular organisms → Archaea → Euryarchaeota	0.69 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.69 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	20.69 %
Unclassified	root	N/A	8.97 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2.76 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1.38 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.69 %
Stenosarchaea group	clade	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group	0.69 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	0.69 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.69 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	8.97 %
Gemmatimonadetes	class	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes	6.21 %
unclassified Gemmatimonadetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes	5.52 %
unclassified Betaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria	1.38 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.69 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.69 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.69 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.69 %
Methylococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales	0.69 %
Halobacteria	class	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	8.97 %
Gemmatimonadales	order	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales	6.21 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	5.52 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1.38 %
Pseudanabaenales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Pseudanabaenales	0.69 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	0.69 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	0.69 %
Methylococcaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae	0.69 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.69 %
Halobacteria	class	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	8.97 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	5.52 %
Gemmatimonadaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	3.45 %
unclassified Gemmatimonadales	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales	2.76 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1.38 %
Leptolyngbyaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Pseudanabaenales → Leptolyngbyaceae	0.69 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.69 %
Methylomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → Methylomonas	0.69 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.69 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.69 %
Halobacteria	class	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	8.97 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	5.52 %
Gemmatimonadales bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	2.76 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1.38 %
Phormidesmis	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Pseudanabaenales → Leptolyngbyaceae → Phormidesmis	0.69 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.69 %
Gemmatimonas	genus	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas	0.69 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.69 %
Methylomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → Methylomonas	0.69 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.69 %
Halobacteria	class	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	8.97 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	5.52 %
Gemmatimonadales bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	2.76 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1.38 %
unclassified Streptomyces	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces	0.69 %
Phormidesmis priestleyi	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Pseudanabaenales → Leptolyngbyaceae → Phormidesmis → Phormidesmis priestleyi	0.69 %
Gemmatimonas aurantiaca	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas → Gemmatimonas aurantiaca	0.69 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.69 %
Methylomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → Methylomonas	0.69 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.69 %
Halobacteria	class	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	8.97 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	5.52 %
Gemmatimonadales bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	2.76 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1.38 %
Streptomyces sp. URHA0041	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. URHA0041	0.69 %
Phormidesmis priestleyi	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Pseudanabaenales → Leptolyngbyaceae → Phormidesmis → Phormidesmis priestleyi	0.69 %
Gemmatimonas aurantiaca	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas → Gemmatimonas aurantiaca	0.69 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.69 %
Methylomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → Methylomonas	0.69 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.69 %
Halobacteria	class	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria	0.69 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001661\|JGI12053J15887_10069753	All Organisms → cellular organisms → Bacteria → Proteobacteria	1947	Open in IMG/M
3300002560\|JGI25383J37093_10099080	All Organisms → cellular organisms → Bacteria	854	Open in IMG/M
3300002561\|JGI25384J37096_10046173	All Organisms → cellular organisms → Bacteria	1670	Open in IMG/M
3300002561\|JGI25384J37096_10079330	All Organisms → cellular organisms → Bacteria	1189	Open in IMG/M
3300002561\|JGI25384J37096_10176255	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	647	Open in IMG/M
3300002562\|JGI25382J37095_10031395	All Organisms → cellular organisms → Bacteria	2083	Open in IMG/M
3300002911\|JGI25390J43892_10024015	All Organisms → cellular organisms → Bacteria	1469	Open in IMG/M
3300002912\|JGI25386J43895_10122775	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	643	Open in IMG/M
3300002916\|JGI25389J43894_1047031	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	733	Open in IMG/M
3300004463\|Ga0063356_102226229	All Organisms → cellular organisms → Bacteria → Proteobacteria	835	Open in IMG/M
3300005093\|Ga0062594_103041217	All Organisms → cellular organisms → Bacteria → Proteobacteria	524	Open in IMG/M
3300005166\|Ga0066674_10186113	All Organisms → cellular organisms → Bacteria → Proteobacteria	987	Open in IMG/M
3300005166\|Ga0066674_10509816	All Organisms → cellular organisms → Bacteria	540	Open in IMG/M
3300005174\|Ga0066680_10302049	All Organisms → cellular organisms → Bacteria → Proteobacteria	1021	Open in IMG/M
3300005177\|Ga0066690_10216831	All Organisms → cellular organisms → Bacteria	1277	Open in IMG/M
3300005180\|Ga0066685_10867780	All Organisms → cellular organisms → Bacteria → Proteobacteria	606	Open in IMG/M
3300005331\|Ga0070670_101037370	All Organisms → cellular organisms → Bacteria	746	Open in IMG/M
3300005343\|Ga0070687_101535016	All Organisms → cellular organisms → Bacteria	502	Open in IMG/M
3300005441\|Ga0070700_100373908	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1064	Open in IMG/M
3300005446\|Ga0066686_10944326	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	563	Open in IMG/M
3300005447\|Ga0066689_11031722	All Organisms → cellular organisms → Bacteria → Proteobacteria	506	Open in IMG/M
3300005450\|Ga0066682_10090645	All Organisms → cellular organisms → Bacteria	1909	Open in IMG/M
3300005451\|Ga0066681_10041080	All Organisms → cellular organisms → Bacteria	2488	Open in IMG/M
3300005451\|Ga0066681_10468727	All Organisms → cellular organisms → Bacteria → Proteobacteria	774	Open in IMG/M
3300005451\|Ga0066681_10480710	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → Methylomonas	764	Open in IMG/M
3300005454\|Ga0066687_10686687	All Organisms → cellular organisms → Bacteria → Proteobacteria	609	Open in IMG/M
3300005468\|Ga0070707_101492186	All Organisms → cellular organisms → Bacteria → Proteobacteria	643	Open in IMG/M
3300005536\|Ga0070697_101693344	All Organisms → cellular organisms → Bacteria → Proteobacteria	566	Open in IMG/M
3300005540\|Ga0066697_10265728	All Organisms → cellular organisms → Bacteria	1014	Open in IMG/M
3300005553\|Ga0066695_10111804	All Organisms → cellular organisms → Bacteria	1681	Open in IMG/M
3300005554\|Ga0066661_10007773	All Organisms → cellular organisms → Bacteria → Proteobacteria	5180	Open in IMG/M
3300005556\|Ga0066707_10129428	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1581	Open in IMG/M
3300005556\|Ga0066707_10994610	All Organisms → cellular organisms → Bacteria	512	Open in IMG/M
3300005556\|Ga0066707_11020481	All Organisms → cellular organisms → Bacteria	504	Open in IMG/M
3300005558\|Ga0066698_10267612	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1181	Open in IMG/M
3300005559\|Ga0066700_10579837	All Organisms → cellular organisms → Bacteria	782	Open in IMG/M
3300005560\|Ga0066670_10012381	All Organisms → cellular organisms → Bacteria	3706	Open in IMG/M
3300005561\|Ga0066699_10282095	All Organisms → cellular organisms → Bacteria	1179	Open in IMG/M
3300005718\|Ga0068866_10185580	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1232	Open in IMG/M
3300005844\|Ga0068862_101550397	All Organisms → cellular organisms → Bacteria	669	Open in IMG/M
3300005874\|Ga0075288_1023969	All Organisms → cellular organisms → Bacteria	874	Open in IMG/M
3300006034\|Ga0066656_10776193	All Organisms → cellular organisms → Bacteria → Proteobacteria	614	Open in IMG/M
3300006175\|Ga0070712_100944006	All Organisms → cellular organisms → Bacteria	745	Open in IMG/M
3300006755\|Ga0079222_10966075	All Organisms → cellular organisms → Bacteria	726	Open in IMG/M
3300006797\|Ga0066659_10163267	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1596	Open in IMG/M
3300006800\|Ga0066660_10071451	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	2356	Open in IMG/M
3300006800\|Ga0066660_10717854	All Organisms → cellular organisms → Bacteria → Proteobacteria	819	Open in IMG/M
3300006804\|Ga0079221_10337403	All Organisms → cellular organisms → Bacteria	903	Open in IMG/M
3300006846\|Ga0075430_100395713	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	1140	Open in IMG/M
3300006871\|Ga0075434_100104738	All Organisms → cellular organisms → Bacteria → Proteobacteria	2839	Open in IMG/M
3300007004\|Ga0079218_12042947	All Organisms → cellular organisms → Bacteria	657	Open in IMG/M
3300007258\|Ga0099793_10251498	All Organisms → cellular organisms → Bacteria	853	Open in IMG/M
3300009012\|Ga0066710_100061456	All Organisms → cellular organisms → Bacteria	4745	Open in IMG/M
3300009012\|Ga0066710_101046926	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1261	Open in IMG/M
3300009137\|Ga0066709_102589659	Not Available	680	Open in IMG/M
3300009174\|Ga0105241_11074213	All Organisms → cellular organisms → Bacteria	757	Open in IMG/M
3300010159\|Ga0099796_10205356	All Organisms → cellular organisms → Bacteria	801	Open in IMG/M
3300010301\|Ga0134070_10259588	All Organisms → cellular organisms → Bacteria	652	Open in IMG/M
3300010321\|Ga0134067_10088756	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1045	Open in IMG/M
3300010323\|Ga0134086_10319389	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	607	Open in IMG/M
3300010325\|Ga0134064_10007615	All Organisms → cellular organisms → Bacteria	2818	Open in IMG/M
3300010325\|Ga0134064_10040632	Not Available	1398	Open in IMG/M
3300010326\|Ga0134065_10406420	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	548	Open in IMG/M
3300010329\|Ga0134111_10454275	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	556	Open in IMG/M
3300010333\|Ga0134080_10219335	Not Available	830	Open in IMG/M
3300010336\|Ga0134071_10028749	All Organisms → cellular organisms → Bacteria	2411	Open in IMG/M
3300010337\|Ga0134062_10423206	All Organisms → cellular organisms → Bacteria	656	Open in IMG/M
3300010362\|Ga0126377_12752478	Not Available	566	Open in IMG/M
3300010396\|Ga0134126_12061637	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	623	Open in IMG/M
3300011003\|Ga0138514_100068338	All Organisms → cellular organisms → Bacteria	741	Open in IMG/M
3300011402\|Ga0137356_1015231	All Organisms → cellular organisms → Bacteria	1367	Open in IMG/M
3300012206\|Ga0137380_11704055	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	514	Open in IMG/M
3300012207\|Ga0137381_11681743	All Organisms → cellular organisms → Bacteria	525	Open in IMG/M
3300012211\|Ga0137377_10122811	All Organisms → cellular organisms → Bacteria	2476	Open in IMG/M
3300012211\|Ga0137377_10242428	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. URHA0041	1732	Open in IMG/M
3300012211\|Ga0137377_10620455	All Organisms → cellular organisms → Bacteria	1018	Open in IMG/M
3300012351\|Ga0137386_10148133	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria	1678	Open in IMG/M
3300012351\|Ga0137386_10585467	All Organisms → cellular organisms → Bacteria	803	Open in IMG/M
3300012351\|Ga0137386_11070545	All Organisms → cellular organisms → Bacteria	570	Open in IMG/M
3300012356\|Ga0137371_11150364	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	581	Open in IMG/M
3300012359\|Ga0137385_10819967	All Organisms → cellular organisms → Bacteria	772	Open in IMG/M
3300012908\|Ga0157286_10280001	Not Available	601	Open in IMG/M
3300012929\|Ga0137404_10876017	All Organisms → cellular organisms → Bacteria	818	Open in IMG/M
3300012930\|Ga0137407_11395069	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Pseudanabaenales → Leptolyngbyaceae → Phormidesmis → Phormidesmis priestleyi	666	Open in IMG/M
3300012960\|Ga0164301_11303733	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	589	Open in IMG/M
3300012972\|Ga0134077_10235844	All Organisms → cellular organisms → Bacteria	754	Open in IMG/M
3300012972\|Ga0134077_10504907	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	536	Open in IMG/M
3300012975\|Ga0134110_10131587	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1026	Open in IMG/M
3300012975\|Ga0134110_10466509	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	570	Open in IMG/M
3300012976\|Ga0134076_10343975	All Organisms → cellular organisms → Bacteria	654	Open in IMG/M
3300012976\|Ga0134076_10592517	All Organisms → cellular organisms → Bacteria	517	Open in IMG/M
3300013096\|Ga0157307_1115078	All Organisms → cellular organisms → Bacteria	588	Open in IMG/M
3300014150\|Ga0134081_10039623	Not Available	1386	Open in IMG/M
3300014154\|Ga0134075_10034877	All Organisms → cellular organisms → Bacteria → Proteobacteria	2052	Open in IMG/M
3300014157\|Ga0134078_10024847	All Organisms → cellular organisms → Bacteria	1921	Open in IMG/M
3300014157\|Ga0134078_10145227	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	929	Open in IMG/M
3300015356\|Ga0134073_10183518	Not Available	684	Open in IMG/M
3300015357\|Ga0134072_10167541	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	736	Open in IMG/M
3300017656\|Ga0134112_10340654	All Organisms → cellular organisms → Bacteria	610	Open in IMG/M
3300018056\|Ga0184623_10190066	All Organisms → cellular organisms → Bacteria	945	Open in IMG/M
3300018063\|Ga0184637_10368935	All Organisms → cellular organisms → Bacteria	860	Open in IMG/M
3300018431\|Ga0066655_10015600	All Organisms → cellular organisms → Bacteria	3421	Open in IMG/M
3300018433\|Ga0066667_10235082	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas → Gemmatimonas aurantiaca	1376	Open in IMG/M
3300018433\|Ga0066667_12095118	All Organisms → cellular organisms → Bacteria	523	Open in IMG/M
3300018466\|Ga0190268_10604291	Not Available	778	Open in IMG/M
3300019487\|Ga0187893_10072471	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	3247	Open in IMG/M
3300020202\|Ga0196964_10341775	Not Available	715	Open in IMG/M
3300020215\|Ga0196963_10223011	Not Available	819	Open in IMG/M
3300021088\|Ga0210404_10349141	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	821	Open in IMG/M
3300024330\|Ga0137417_1021238	All Organisms → cellular organisms → Bacteria	1730	Open in IMG/M
3300025899\|Ga0207642_10762506	All Organisms → cellular organisms → Bacteria	613	Open in IMG/M
3300025904\|Ga0207647_10445277	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	726	Open in IMG/M
3300025910\|Ga0207684_10498969	All Organisms → cellular organisms → Bacteria	1043	Open in IMG/M
3300025915\|Ga0207693_10688156	All Organisms → cellular organisms → Bacteria	793	Open in IMG/M
3300025939\|Ga0207665_10414643	All Organisms → cellular organisms → Bacteria	1028	Open in IMG/M
3300026277\|Ga0209350_1088254	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	806	Open in IMG/M
3300026295\|Ga0209234_1274499	All Organisms → cellular organisms → Bacteria	543	Open in IMG/M
3300026307\|Ga0209469_1084502	All Organisms → cellular organisms → Bacteria	937	Open in IMG/M
3300026316\|Ga0209155_1004947	All Organisms → cellular organisms → Bacteria → Proteobacteria	5976	Open in IMG/M
3300026316\|Ga0209155_1105108	All Organisms → cellular organisms → Bacteria	1011	Open in IMG/M
3300026318\|Ga0209471_1015294	All Organisms → cellular organisms → Bacteria	3935	Open in IMG/M
3300026325\|Ga0209152_10482773	All Organisms → cellular organisms → Bacteria	507	Open in IMG/M
3300026328\|Ga0209802_1140275	All Organisms → cellular organisms → Bacteria	1036	Open in IMG/M
3300026329\|Ga0209375_1210859	Not Available	722	Open in IMG/M
3300026523\|Ga0209808_1188746	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	710	Open in IMG/M
3300026524\|Ga0209690_1085566	All Organisms → cellular organisms → Bacteria	1319	Open in IMG/M
3300026530\|Ga0209807_1017319	All Organisms → cellular organisms → Bacteria	3528	Open in IMG/M
3300026536\|Ga0209058_1319301	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	535	Open in IMG/M
3300026540\|Ga0209376_1408256	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	508	Open in IMG/M
3300027360\|Ga0209969_1068773	Not Available	562	Open in IMG/M
3300027731\|Ga0209592_1124919	Not Available	932	Open in IMG/M
3300027748\|Ga0209689_1102264	All Organisms → cellular organisms → Bacteria	1476	Open in IMG/M
3300028592\|Ga0247822_11013377	All Organisms → cellular organisms → Bacteria	686	Open in IMG/M
3300028722\|Ga0307319_10246511	All Organisms → cellular organisms → Bacteria	588	Open in IMG/M
3300028791\|Ga0307290_10016076	All Organisms → cellular organisms → Bacteria	2570	Open in IMG/M
3300028824\|Ga0307310_10472889	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	629	Open in IMG/M
3300030606\|Ga0299906_11020974	All Organisms → cellular organisms → Bacteria	604	Open in IMG/M
3300031547\|Ga0310887_10078795	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	1572	Open in IMG/M
3300031847\|Ga0310907_10841145	All Organisms → cellular organisms → Bacteria	516	Open in IMG/M
3300031940\|Ga0310901_10431797	All Organisms → cellular organisms → Bacteria	579	Open in IMG/M
3300032002\|Ga0307416_103887410	All Organisms → cellular organisms → Bacteria	500	Open in IMG/M
3300032075\|Ga0310890_10543810	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	890	Open in IMG/M
3300032126\|Ga0307415_100108053	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	2057	Open in IMG/M
3300032180\|Ga0307471_100362268	All Organisms → cellular organisms → Bacteria	1565	Open in IMG/M
3300032205\|Ga0307472_101763720	All Organisms → cellular organisms → Bacteria	613	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	91.72%
Host-Associated	Host-Associated	8.28%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	88.97%
Plants	Host-Associated → Plants	8.28%
Aquatic	Environmental → Aquatic	2.76%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	87.59%
Rhizoplane	Host-Associated → Plants → Rhizoplane	4.14%
Rhizosphere	Host-Associated → Plants → Rhizosphere	4.14%
Sediment	Environmental → Aquatic → Sediment	2.07%
Freshwater	Environmental → Aquatic → Freshwater	0.69%
Cave	Environmental → Terrestrial → Cave	0.69%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	0.69%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	77.93%
Loam	Environmental → Terrestrial → Soil → Loam	7.59%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	4.14%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	3.45%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.07%
Sand	Environmental → Terrestrial → Soil → Sand	1.38%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.69%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.69%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	0.69%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	0.69%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.69%

Habitat	Taxonomy	Distribution
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	36.55%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	33.10%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.52%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	4.14%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	3.45%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	3.45%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.76%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.07%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	2.07%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.38%
Desert	Environmental → Terrestrial → Soil → Sand → Desert	1.38%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.69%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.69%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.69%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	0.69%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	0.69%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.69%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	25.52%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	15.86%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	11.03%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	10.34%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	5.52%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	3.45%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	2.07%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.38%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.38%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.38%
Soil	Environmental → Terrestrial → Soil → Sand → Desert → Soil	1.38%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	1.38%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.38%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.38%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	1.38%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	0.69%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.69%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.69%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.69%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.69%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.69%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	0.69%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.69%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.69%
Microbial Mat On Rocks	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Microbial Mat On Rocks	0.69%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	0.69%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.69%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.69%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.69%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.69%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001661	Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)	Environmental	Open in IMG/M
3300002560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm	Environmental	Open in IMG/M
3300002561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm	Environmental	Open in IMG/M
3300002562	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300002911	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm	Environmental	Open in IMG/M
3300002912	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_40cm	Environmental	Open in IMG/M
3300002916	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_20cm	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005450	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005454	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146	Environmental	Open in IMG/M
3300005553	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005718	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2	Host-Associated	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300005874	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_0N_404	Environmental	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300010159	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3	Environmental	Open in IMG/M
3300010301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09082015	Environmental	Open in IMG/M
3300010321	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09212015	Environmental	Open in IMG/M
3300010323	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_0_1 metaG	Environmental	Open in IMG/M
3300010326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_11112015	Environmental	Open in IMG/M
3300010333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010336	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015	Environmental	Open in IMG/M
3300010337	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300011003	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t9i015	Environmental	Open in IMG/M
3300011402	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT830_2	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012908	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S089-202R-1	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012972	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300012975	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_11112015	Environmental	Open in IMG/M
3300012976	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_0_1 metaG	Environmental	Open in IMG/M
3300013096	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2	Environmental	Open in IMG/M
3300014150	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300014154	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09212015	Environmental	Open in IMG/M
3300014157	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300015356	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015357	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_0_1 metaG	Environmental	Open in IMG/M
3300017656	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_11112015	Environmental	Open in IMG/M
3300018056	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_b1	Environmental	Open in IMG/M
3300018063	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b2	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300019487	White microbial mat communities from a basaltic lava cave in the Kipuka Kanohina Cave System on the Island of Hawaii, USA - MA170107-4 metaG	Environmental	Open in IMG/M
3300020202	Soil microbial communities from Anza Borrego desert, Southern California, United States - S1_10	Environmental	Open in IMG/M
3300020215	Soil microbial communities from Anza Borrego desert, Southern California, United States - S1_5	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300024330	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025904	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes)	Host-Associated	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026277	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_2_20cm (SPAdes)	Environmental	Open in IMG/M
3300026295	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026307	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123 (SPAdes)	Environmental	Open in IMG/M
3300026316	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122 (SPAdes)	Environmental	Open in IMG/M
3300026318	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128 (SPAdes)	Environmental	Open in IMG/M
3300026325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107 (SPAdes)	Environmental	Open in IMG/M
3300026328	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129 (SPAdes)	Environmental	Open in IMG/M
3300026329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131 (SPAdes)	Environmental	Open in IMG/M
3300026523	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157 (SPAdes)	Environmental	Open in IMG/M
3300026524	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150 (SPAdes)	Environmental	Open in IMG/M
3300026530	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154 (SPAdes)	Environmental	Open in IMG/M
3300026536	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147 (SPAdes)	Environmental	Open in IMG/M
3300026540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134 (SPAdes)	Environmental	Open in IMG/M
3300027360	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 PM (SPAdes)	Host-Associated	Open in IMG/M
3300027731	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 19-21cm March2015 (SPAdes)	Environmental	Open in IMG/M
3300027748	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149 (SPAdes)	Environmental	Open in IMG/M
3300028592	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Cellulose_Day30	Environmental	Open in IMG/M
3300028722	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_368	Environmental	Open in IMG/M
3300028791	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_144	Environmental	Open in IMG/M
3300028824	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197	Environmental	Open in IMG/M
3300030606	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT145D125	Environmental	Open in IMG/M
3300031547	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D4	Environmental	Open in IMG/M
3300031847	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D4	Environmental	Open in IMG/M
3300031940	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D2	Environmental	Open in IMG/M
3300032002	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3	Host-Associated	Open in IMG/M
3300032075	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3	Environmental	Open in IMG/M
3300032126	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2	Host-Associated	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12053J15887_100697533	3300001661	Forest Soil	MTASPEPPFGIVRVAPFAGFVQRFEDLIGSSSTMALYFIHSRRWRENHDAAIK
JGI25383J37093_100990802	3300002560	Grasslands Soil	MTASSEPPFGIVRVAPFAGFVHRFDELIGSSTTMSMYFIHSRRWRENH
JGI25384J37096_100461731	3300002561	Grasslands Soil	MSATPEPPFGIVRVAPFAGFVQRFDDLITSSATMALYFIHSRRWRENHDAAIKAFLGRAGTTLEAF
JGI25384J37096_100793303	3300002561	Grasslands Soil	MTASSEPPFGIVRVAPFAGFVHRFDELIGSSTTMSMYFIHSRRWRENHDAAIKAFLGRAG
JGI25384J37096_101762552	3300002561	Grasslands Soil	MTATPQPADPPFGIVRVAPFAGFVQRFDDLIESSTTLALCF
JGI25382J37095_100313951	3300002562	Grasslands Soil	MTATPQPADPPFGIVRVAPFAGFVQRFDDLIESSTTLALCFIHSRRWRXNXDAAIKAFVGRAGTTLEAFLPDLEDHELMFSLGK
JGI25390J43892_100240152	3300002911	Grasslands Soil	MSASFGILRVAPFAGFVQRFDDLIGSATTMSLYFIHSRRWRENHDAAIK
JGI25386J43895_101227752	3300002912	Grasslands Soil	MSATPEPPFGIVRVAPFAGFVQRFDDLITSSATMALYFIHSRRWRENHDAAIKA
JGI25389J43894_10470311	3300002916	Grasslands Soil	LLLRPAGASIEPMTARPEPHFGIVQLGPFAGFVQRFEDLIGSATRMALYFIHSRRWRENHDAAIK
Ga0063356_1022262291	3300004463	Arabidopsis Thaliana Rhizosphere	MTSASDALPGIVRVAPFAGFVQRFDELIRSSNQMVLYFIHSRRWRENHDASIKAFV
Ga0062594_1030412172	3300005093	Soil	MTASPEPPFGIVRVAPFAGFVQRFEDLIGSSTTMALYFIHSRRWRENHD
Ga0066674_101861131	3300005166	Soil	MSATPEPPFGIVRVAPFAGFVQRFDDLITSSATMALYFIHSRRWRENHD
Ga0066674_105098162	3300005166	Soil	MSASFGILRVAPFAGFVQRFDDLIGSATTMSLYFIHSRRWRENHDAAIKAF
Ga0066680_103020491	3300005174	Soil	MTASPEPPFGIVRVAPFAGFVQRFEDLIGSATTMALYFIHSRRWRENHDAAIKAFVGR
Ga0066690_102168313	3300005177	Soil	LLLRPAGASIEPMTARPEPHFGIVQLGPFAGFVQRFEDLIGSATRMALYFIHSRRWRENHDAAIKAFLGR
Ga0066685_108677802	3300005180	Soil	MTAAPEPPFGIVRVAPFAAFVQRFDDLIGSSSTMALYFIHSRRWRENHDA
Ga0070670_1010373701	3300005331	Switchgrass Rhizosphere	MTSIPPPAPSEILRIDSFTAFVPRFEELIGSTTRMAVYFIHSRRWRENHDAAIKAFVARQ
Ga0070687_1015350162	3300005343	Switchgrass Rhizosphere	MTTPLEPASGIVRVGSFAGFYQRFEELIATSSRMALYFIHSRRWRENHSAAIKTFLARSDTA
Ga0070700_1003739081	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	LIAQMTTPLEPASGIVRVGSFAGFYQRFEELIATSSRMALYFIHSRRWRENHSAAIKT
Ga0066686_109443262	3300005446	Soil	MSASFGILRVAPFAGFVQRFDDLIGSATTMSLYFIHSRRWRENHDAAIKAFVARAGTTLEVFLP
Ga0066689_110317222	3300005447	Soil	MTATPEPPFGIVQVAPFAGLVQRFDDLIGSSTTMALYFIHSRRWRENHDAAIK
Ga0066682_100906451	3300005450	Soil	MTATPEFPFGIVGVAPFAGFVHRFDDLIGSATTMALYFIHSRRWRENHDAAI
Ga0066681_100410801	3300005451	Soil	MAATPEPPFGIVQVAPFAGFVRRFDDLIGSATTMALYFIHSRRWRENHDAAIKAFLGRAGTTLE
Ga0066681_104687272	3300005451	Soil	MTASPEPPFGIVRVAPFAGFVHRFEDLIGSATTMALYFIHSRRWRENHDAAIKAFVGR
Ga0066681_104807102	3300005451	Soil	LLLRFAWASIESMTAAPEPPFGIVQLGPFAGFVHRFDDLIASATTMALYFIHSRRWRENHDAAIK
Ga0066687_106866872	3300005454	Soil	MTAAPEPPFGIVQLGPFAGFVHRFDDLIASATTMALYFIHSRRWRENHDAAIKGFLGRPG
Ga0070707_1014921862	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	VKPAENGYEYPMTSGLEPQPGIVRVAPFAGFVQRFEDLIGSSSQMILYFIHSRRWRENH
Ga0070697_1016933442	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MTSPVELPSGIVRIAPFTAFVQRFEDLLASSTRLVLYFIHSRRWRENHDAAIKTFL
Ga0066697_102657282	3300005540	Soil	MSASPEPPFGIVRVAPFAGFVHRFEDLIGSATTMALYF
Ga0066695_101118044	3300005553	Soil	MTATPQPADPPFGIVRVAPFAGFVQRFDDLIESSTTLALCFIHSRRWRENHDAAIKA
Ga0066661_100077731	3300005554	Soil	MTASPEPPFGIVRVAPFAGFVHRFEDLIGSATTMALYFIHSRRWRENH
Ga0066707_101294283	3300005556	Soil	MTASPEPPFGIVRVAPFAGFVQRFEDLIGSATTMALYFIHSRRWRENHDAAIKAFVG
Ga0066707_109946101	3300005556	Soil	MTATPEPPFGIVRVAPFAGFVHRFDDLIGSSTTMALYF
Ga0066707_110204812	3300005556	Soil	MTSVSPASSGIVRVGPFAGFVHRFDDLIASATQMVLYF
Ga0066698_102676121	3300005558	Soil	MTAAPEPPFGIVRVAPFAAFVQRFDDLIGSSSTMALYFIHSRRWRE
Ga0066700_105798372	3300005559	Soil	MTARPEPHFGIVQLGPFAGFVQRFEDLIGSATAMALYFIHSRRWRENHDAAIKAFLGR
Ga0066670_100123811	3300005560	Soil	MAATPEPPFGIVQVAPFAGFVRRFDDLIGSATTMALYFIHSRRWRENHD
Ga0066699_102820953	3300005561	Soil	MTARPEPHFGIVQLGPFAGFVQRFEDLIGSATTMALYFIHSRRWRENHDAAIKAF
Ga0068866_101855803	3300005718	Miscanthus Rhizosphere	MTTPLEPASGIVRVGSFAGFYQRFEELIATSSRMALYYIHSRRWRENHSAAIKTFL
Ga0068862_1015503971	3300005844	Switchgrass Rhizosphere	MTSPVELPSGIVRVAPFTAFVPRFEDLLASSTRLVLYFIHSRRWRENHDAAIKT
Ga0075288_10239692	3300005874	Rice Paddy Soil	MSPESDTPSGIVRVEPFSAFVQRFEDLIGSSTRMELYFIHSRRWRENHDAAIKAFLG
Ga0066656_107761932	3300006034	Soil	MTATPEIPFGIVQVAPFAGLVQRFDDLIGSATTMALYFIHSRRWRENHDATIKAFLGRAGTTLEVFLPDLEDHEL
Ga0070712_1009440061	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MSPDPEALAGIERVAPFAGFVQRFEDLIAGSAQMVLYFIHSRRWRENHDAAIKAFMARAETSL
Ga0079222_109660752	3300006755	Agricultural Soil	MTSVPAPSSEILRIDSFTAFVPRFEELIASTSRMAVYFIHSRRWRENHDAAIKAFLAREGTTFEVFL
Ga0066659_101632671	3300006797	Soil	MTASPEPPFGIVRVAPFAGFVQRFEDLIGSATTMALYFIHSRRWRENHDAAIKAFVGRADTT
Ga0066660_100714514	3300006800	Soil	MTAAPEPPFGIVQLGPFAGFVHRFDHLIASATTMALYFIHSRR
Ga0066660_107178542	3300006800	Soil	LLLRASGGSIEPMTVSPEPPFGIVQVAPFAGFVHRFDDLIASATTMALYFIHSRRWRENHDAA
Ga0079221_103374032	3300006804	Agricultural Soil	MSQSFGILRVAPFAGFVQRFDDLIGSATTMSLYFIHSRRWRENHDAAIKAFVAR
Ga0075430_1003957132	3300006846	Populus Rhizosphere	MTSPVEPQSDILRVAPFTAFVPRFEELIAAASRMAVYFIHSR
Ga0075434_1001047383	3300006871	Populus Rhizosphere	MTSPDALPGMVRVAPFAGFVHRFDELIRSSNQMTLYFIHSRRWRENHDAAIKAFLGR
Ga0079218_120429471	3300007004	Agricultural Soil	MTTPAAAPPGIVRLGPFAGFFERFEELIAGSSSLALYFIHSRRWRENHDAALK
Ga0099793_102514981	3300007258	Vadose Zone Soil	MTVSAEPPFGIVRVAPFAGFVQRFEDLIGSATTMALYFIHSRRWRENHDAAIKAFVGRGGTTPDVFLPAL*
Ga0066710_1000614561	3300009012	Grasslands Soil	MTASPEPPFGIVRVAPFAGFVHRFDDLIGSATTMALYFIHSRRWRENHDAAIKGF
Ga0066710_1010469261	3300009012	Grasslands Soil	MTATPEIPFGIVQVAPFAGFVQRFDDLIGSATTMALYFIHSRRWRENHDATIKAFLGRAGTT
Ga0066709_1025896592	3300009137	Grasslands Soil	MTVSPEPPFGIVQVAPFAGFVHRFDDLIASATTMALYFIHSRRWRENHDAAIKAFLGRTDTT
Ga0105241_110742132	3300009174	Corn Rhizosphere	MTMPLEPVSGIVRVGSFAGFYQRFEELIAASTRMALYFIHSRRWRENHSAAIKTFLAR
Ga0099796_102053562	3300010159	Vadose Zone Soil	MTASSEPPFGIVRVAPFAGFVHRFDELIESSTTMSVYFIHSRRWRENHD
Ga0134070_102595881	3300010301	Grasslands Soil	MSASFGILRVAPFAGFVQRFDDLIGSATTMSLYFIHSRRWRENHDAATKAFVPLAGTTLE
Ga0134067_100887561	3300010321	Grasslands Soil	MTAAPEPASGIVRVAPFAALVHRFDDLIASATTMALYFIHSRR*
Ga0134086_103193892	3300010323	Grasslands Soil	MTATPEPPFGIVQVAPFAGLVQRFEDLIGSSTTMALYFIHSRRWRENHDAAIKAFLGR
Ga0134064_100076151	3300010325	Grasslands Soil	MTATPEFPFGIVGVAPFAGFVHRFDDLIGSATTMALYFIHSRRWRENHDAAIKAFLGRAGTTLEV
Ga0134064_100406321	3300010325	Grasslands Soil	MTVSPEPPFGIVQVAPFAGFVHRFDDLIASATTMALY
Ga0134065_104064201	3300010326	Grasslands Soil	MTASPEPPFGIVQLGPFAGFVHRFDDLIASATTMALYFIHSRRWRENHDAAIKGF
Ga0134111_104542751	3300010329	Grasslands Soil	MTATPEPPFGIVQVAPFAGLVQRFEDLIGSSTTMALYFIHSRRWRENHDAAIKAF
Ga0134080_102193352	3300010333	Grasslands Soil	MTATPEIPFGIVQVAPFAGFVRRFEDLIGSATTMALYFIHSRRWRENHDAAIKAFLG
Ga0134071_100287495	3300010336	Grasslands Soil	MTATPEFPFGIVGVAPFAGFVHRFDDLIGSATTMALYFIHSRRWRENHDAAIKAFLGRAG
Ga0134062_104232061	3300010337	Grasslands Soil	MSASPEPPFGIVRVAPFAGFVHRFEDLIGSATTMA
Ga0126377_127524781	3300010362	Tropical Forest Soil	MNAMTSPVPELAGMIRVGSFGSFFQRFDELIAGSNGMTLYFIHSRRWRENHDATIKSFLRREGTT
Ga0134126_120616373	3300010396	Terrestrial Soil	MTASPEPPFGIVRVAPFAGFVQRFEDLIGSSTTMALYFIHSRRWREN
Ga0138514_1000683382	3300011003	Soil	MTAVPPSSSGIVRVGPFAGFVQRFDDLIASASQMVLY
Ga0137356_10152313	3300011402	Soil	MAGIIHVAPFAGFFQRFEELIASSTQMTLYFIHSRRWRENHAAALQAFLARENTRLEVFL
Ga0137380_117040551	3300012206	Vadose Zone Soil	MTATPEPPFGIVRVAPFAGFVQRFDELIGSSTTMALYFIHSRRW
Ga0137381_116817432	3300012207	Vadose Zone Soil	MSASFGILRVAPFAGFVQRFDDLIGSATTMSLYFIHSR
Ga0137377_101228111	3300012211	Vadose Zone Soil	MTASPEPPFGIVRVAPFAGFVHRFDDLIGSATTMALYFIHSRRWRENHDAAIKGFL
Ga0137377_102424281	3300012211	Vadose Zone Soil	MTAPPEPPFGIVQLGPFAGFVHRFDDLIGSATTMALYFIHSRRWRENHDAAIKGFLR
Ga0137377_106204552	3300012211	Vadose Zone Soil	MTATPEPPFGIVRVAPFAGFVHRFDDLIGSSTTMALYFIHSRRWRENHDAAIKAFL
Ga0137386_101481331	3300012351	Vadose Zone Soil	MTAPPEPPFGIVQLGPFAGFVHRFDDLIGSATTMALYFIHSRRWRENHDAAIK
Ga0137386_105854671	3300012351	Vadose Zone Soil	MSASFGIVRVAPFAGFVQRFDDLIGSATTMSLYFIHSRRWRENHDAAIKA
Ga0137386_110705452	3300012351	Vadose Zone Soil	MSASPEPPFGIVRVAPFAGFVHRFEDLIGSATTMALYFIH
Ga0137371_111503642	3300012356	Vadose Zone Soil	MSATPEPPFGIVRVAPFAGFVQRFDDLITSSATMALYFIHSRRWRENHDAAIKAFLGRAGTTL
Ga0137385_108199671	3300012359	Vadose Zone Soil	MTAPPEPPFGIVQLGPFAGFVHRFDDLIGSATTMALYFIHSRR
Ga0157286_102800011	3300012908	Soil	MTTPLEPVSGIVRVGSFAGFYQRFEELIATSSRMALYFIHSRRWRENHSAAIKTF
Ga0137404_108760171	3300012929	Vadose Zone Soil	MSDEPESLSGIARVESFAGFVQRFEDLIGTSTQMVLYFIHSRRWRENHDASIKAFL
Ga0137407_113950691	3300012930	Vadose Zone Soil	MTSVSPASSGIVRVGPFAGFVHRFDDLIASATQMVLYFIHSRRWRENHDAAIKA
Ga0164301_113037331	3300012960	Soil	MTSAPAPASEIVRVDTFTAFVPRCEELLASATRLAVYFIHSRRWRENHDAAIKA
Ga0134077_102358441	3300012972	Grasslands Soil	MTAAPEPPFGIVRVAPFAAFVQRFDDLIGSSSTMALYFIHSRRWRENHDAAIK
Ga0134077_105049072	3300012972	Grasslands Soil	VSATPEPPFGIVRVAPFAGFVQRFDDLIASAATMALYFIHSRRWRENHDAAIKAF
Ga0134110_101315872	3300012975	Grasslands Soil	MTASPEPPFGIVQLGPFAGFVHRFDDLIGSATTMALYFIHSRRWRENHD
Ga0134110_104665091	3300012975	Grasslands Soil	MTVSPEPPFGIVQVAPFAGFVHRFDDLIASATTMALYFIHSRRWRENHDAAIKAFLGRTDTTLEVF
Ga0134076_103439752	3300012976	Grasslands Soil	MSASFGILRVAPFAGFVQRFDDLIGSTTTMSLYFIHSRRWRENHDAAIKAFVARAGTT
Ga0134076_105925172	3300012976	Grasslands Soil	MSTSFGILRVAPFAGFVQRFDDLIASATTMSLYFIHSRRWREN
Ga0157307_11150781	3300013096	Soil	MTTPLEPASGIVRVGSFAGFYQRFEELIATSSRMALYFIHSRRWRENHSAAIKTFLARNDTAIQI
Ga0134081_100396232	3300014150	Grasslands Soil	MSATPEPPFGIVRVAPFAGFVQRFDDLITSAATMALYFIHSRRWRENHDAAI
Ga0134075_100348773	3300014154	Grasslands Soil	MSATPEPPFGIVRVAPFAGFVQRFDDLITSSATMALYFIHSRRWRENHDAAIKAFLGRAD
Ga0134078_100248471	3300014157	Grasslands Soil	MTATPGFPFGFVGVAPFAGFVHRFDDLIGSATPMGPYFIHSRRW
Ga0134078_101452271	3300014157	Grasslands Soil	MTATPELPFGIVQVAPFAGFVRRFEDLIGSATTMA
Ga0134073_101835182	3300015356	Grasslands Soil	MTARPEPHFGIVQLGPFAGFVQRFEDLIGSATRMALYFIH
Ga0134072_101675412	3300015357	Grasslands Soil	MTAAPEPASGIVRVAPFAALVHRFDDLIGSATTMALYFIHSRRWRENHDAAIKGFLGRPGTT
Ga0134112_103406542	3300017656	Grasslands Soil	MSASFGILRVAPFAGFVQRFDDLIGSATTMSLYFIHSRRWREN
Ga0184623_101900661	3300018056	Groundwater Sediment	MTLTPSTPEAPGIVRVGSFAGFVPRFDELIGSSSSMVLYFIHSRRWRENHDAAIKA
Ga0184637_103689352	3300018063	Groundwater Sediment	MTTHPEPLAGIVRVGSFAGFYQRFEELIAESNRIVLYFIHSRRWRENHDAAIKAFLGRNDTTME
Ga0066655_100156005	3300018431	Grasslands Soil	MTAAPEPASGIVRVAPFAALVHRFDDLIGSATTMALYFIHSRRWRENHDAAI
Ga0066667_102350821	3300018433	Grasslands Soil	MTAAPEPPFGIVQLGPFAGFVHRFDDLIASATTMALYFIHSRRWRENHD
Ga0066667_120951182	3300018433	Grasslands Soil	MSASFGILRVAPFAGFVQRFDDLIGSATTMSLYFIHSRRWRENH
Ga0190268_106042912	3300018466	Soil	MTAHSDSLAGIVRVGPFAGYYQRFEELIAESRKMVLYFIHSRRWRESHGAAIKAFLAREGTTLEIFLPDL
Ga0187893_100724714	3300019487	Microbial Mat On Rocks	MTSPEPQAGILRVGPFAGFYQRFEELIGSSSRLVLYFIHSRRWRENHSAAIKSFLARQGTTL
Ga0196964_103417753	3300020202	Soil	MTNPSQSEAGILRVGSFAGFYQRFEELIVESSRMVLYFIHSRRWRENHSAAIKSFLARSD
Ga0196963_102230113	3300020215	Soil	MTNPSQSEAGILRVGSFAGFYQRFEELIVESSRMVLYFIHSRRWRENHSAAIK
Ga0210404_103491411	3300021088	Soil	MTASAEPPFGIIRVAPFAGFVHRFDELIGSSNTMALYFIHSRR
Ga0137417_10212384	3300024330	Vadose Zone Soil	MTATPEPPFGIVRVAPFAGLVQRFDDLIGSSTTMVLYFIHS
Ga0207642_107625062	3300025899	Miscanthus Rhizosphere	MTTPLEPASGIVRVGSFAGFYQRFEELIATSSRMALYFIHSRRWRETPSAAIKTFLARRDTAIQ
Ga0207647_104452772	3300025904	Corn Rhizosphere	MTSPVELSSGIVRVAPFTAFVPRFEELLASSTRVVLYFIHSRRWRENHDAAIKAFLAREGTTLEVFL
Ga0207684_104989692	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MSESFGILRVAPFAGFVQRFDDLIGSATTMSLYFIHSRRWRENHDAAIKAFVARAGTT
Ga0207693_106881562	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MSPASEALAGIERVAPFAGFVQRFEDLIAGSTQMVLYFIHSRRWRENHDAAIKTFMSRPDTS
Ga0207665_104146433	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MTSAPEPLAGIVRVAPFSGFYQRFEELIASATQMGLYFIHSRRWRENHDAAVKAFLARE
Ga0209350_10882541	3300026277	Grasslands Soil	MSATPEPPFGIVRVAPFAGFVQRFDDLIASSATMALY
Ga0209234_12744992	3300026295	Grasslands Soil	MTASPEPPFGIVRVAPFAGFVHRFEDLIGSATTMALYFI
Ga0209469_10845021	3300026307	Soil	MSASPEPPFGIVRVAPFAGFVHRFEDLIGSATTMALYFIHSRRWRENHDAAIKAFVGR
Ga0209155_10049478	3300026316	Soil	MTATPEFPFGIVGVAPFAGFVHRFDDLIGSATTMALYFIHSRR
Ga0209155_11051082	3300026316	Soil	MTASPEPPFGIVRVAPFAGFVHRFEDLIGSATTMALYFIHS
Ga0209471_10152944	3300026318	Soil	MTASPEPPFGIVRVAPFAGFVHRFEDLIGSATTMALYFIHSRRWRENHDAAI
Ga0209152_104827732	3300026325	Soil	MTAAPKPPFGIVRVAPFAAFVQRFDDLIGSSSTMALYFIHSRR
Ga0209802_11402751	3300026328	Soil	MTASPEPPFGIVRVAPFAGFVHRFEDLIGSATTMALYFIHSRRWRENHDAAIKAFVGRANTTLEVFLPD
Ga0209375_12108592	3300026329	Soil	LLLRASGGSIEPMTVSPEPPFGIVQVAPFAAFVHRFDDLIASATTMALYFIHSRRWRENHDAAIKAFLGRTDTTLEVFLPDLE
Ga0209808_11887462	3300026523	Soil	MTAAPEPPFGIVQLGPFAGFVHRFDDLIASATTMALYFIHSRRWR
Ga0209690_10855663	3300026524	Soil	MTASPEPPFGIVRVAPFAGFVHRFEDLIGSATTMALYFIHSRRWRENHDAAIKAFVGRADTTLE
Ga0209807_10173191	3300026530	Soil	MTAAPEPASGIVRVAPFAALVHRFDDLIASATTMALYFIHSRRWRENHDAAIKG
Ga0209058_13193011	3300026536	Soil	MSASFGILRVAPFAGFVQRFDDLIGSATTMSLYFIHSRRWRENHDAAIKAFVA
Ga0209376_14082562	3300026540	Soil	MTATPEIPFGIVQVAPFAGLVQRFDDLIGSATTMALYFIHSRRWRENHDATIKAFLG
Ga0209969_10687731	3300027360	Arabidopsis Thaliana Rhizosphere	VGPFAGFYQRFEELIVSSNRMVLYFIHSRRWRENHGAAVKTFLA
Ga0209592_11249191	3300027731	Freshwater Sediment	MTSLPESLAGIVRVGPFAGFYQRFEELIGESTRLVLYFIHSRRWRENHDAAIKAFLARN
Ga0209689_11022641	3300027748	Soil	MSASFGILRVAPFAGFVQRFDDLIGSATTMSLYFIHSRRWRENHDAAIKAFV
Ga0247822_110133771	3300028592	Soil	MTSPVEVPSGIVRVAPFTAFMQRFEDLLASSTRLALYFIHSRRWRENHDAAIK
Ga0307319_102465112	3300028722	Soil	MTSPVELQSGIVRVAPFTAFVQRFEDLLASSTRLVLYFIHSRRWRENHDAA
Ga0307290_100160763	3300028791	Soil	MTSVSPASSGIVRVGPFAGFVHRFDDLIASATQMVLYFIHSRRWRENHDAAIKTF
Ga0307310_104728892	3300028824	Soil	MTSPVELSSGIVRVAPFTGFVQRFEDLLASSNRLVLYFIHSRRWRENHDVAIKTFL
Ga0299906_110209742	3300030606	Soil	MTFTPSTSEPPGIVRVGSFAGFVPRFDELIGSSRSMVLYFIHSRRWRENHDSAIKAFLGREGTS
Ga0310887_100787953	3300031547	Soil	MTTPLEPVSGIVRVGSFAGFYQRFEELIATSSRMALYFIHSRRWRENHSAAIKTFLARGDTAIQIF
Ga0310907_108411451	3300031847	Soil	MTTPLEPVSGIVRVGSFAGFYQRFEELIATSTRMALYFIHSRRWRENHS
Ga0310901_104317972	3300031940	Soil	MTSASDALPGIVRVAPFAGFVQRFDELIRSSNQMVLYFIHSRRWRENHDAAIKAFVGREQ
Ga0307416_1038874101	3300032002	Rhizosphere	VTGSIPAPPSDIIQVAPFVGFVQRFEELIASSSRLAVYFIHSRRWRENHDA
Ga0310890_105438103	3300032075	Soil	MTTPLEPVSGIVRVGSFAGFYQRFEELIATSTRMALYFIHSRRWRENHSAAIK
Ga0307415_1001080531	3300032126	Rhizosphere	MTDSSEVQAGILRVGSFAGFYQRFEELIASSSHMALYFIHSRRWRENHDEAIKSFLGREGTTLE
Ga0307471_1003622681	3300032180	Hardwood Forest Soil	MTASPEPPFGIVRVAPFAGFVQRFEDLIGSSTTMALYFI
Ga0307472_1017637201	3300032205	Hardwood Forest Soil	MSASFGILRVAPFAGFVQRFDDLIGSATTMSLYFIHSRR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F050540

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences