NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F050552

Metagenome / Metatranscriptome Family F050552

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F050552
Family Type Metagenome / Metatranscriptome
Number of Sequences 145
Average Sequence Length 118 residues
Representative Sequence IAAWTGWDLLADALFVMTCGLVTCYTRVSGLRGVVVCPPLTFLAGSVLAQVITAADAFSAAAGILVTLGTSAPWLFTGTGLTVVIALGRGWRPELAVLANLREAVRDIRPRGHRWVERR
Number of Associated Samples 123
Number of Associated Scaffolds 145

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 1.38 %
% of genes near scaffold ends (potentially truncated) 94.48 %
% of genes from short scaffolds (< 2000 bps) 88.97 %
Associated GOLD sequencing projects 117
AlphaFold2 3D model prediction Yes
3D model pTM-score0.27

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (68.276 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil
(14.483 % of family members)
Environment Ontology (ENVO) Unclassified
(27.586 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(40.690 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Transmembrane (alpha-helical) Signal Peptide: No Secondary Structure distribution: α-helix: 57.14%    β-sheet: 0.00%    Coil/Unstructured: 42.86%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.27
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 145 Family Scaffolds
PF02401LYTB 18.62
PF00196GerE 15.86
PF13487HD_5 7.59
PF01966HD 4.83
PF02646RmuC 1.38
PF02776TPP_enzyme_N 0.69
PF07690MFS_1 0.69
PF03631Virul_fac_BrkB 0.69
PF10415FumaraseC_C 0.69
PF02518HATPase_c 0.69

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 145 Family Scaffolds
COG07614-Hydroxy-3-methylbut-2-enyl diphosphate reductase IspHLipid transport and metabolism [I] 37.24
COG1322DNA anti-recombination protein (rearrangement mutator) RmuCReplication, recombination and repair [L] 1.38
COG1295Uncharacterized membrane protein, BrkB/YihY/UPF0761 family (not an RNase)Function unknown [S] 0.69


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms68.28 %
UnclassifiedrootN/A31.72 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300004081|Ga0063454_100170080All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1188Open in IMG/M
3300005166|Ga0066674_10548080All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura flavalba515Open in IMG/M
3300005331|Ga0070670_101135007All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia713Open in IMG/M
3300005337|Ga0070682_101542137All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura flavalba573Open in IMG/M
3300005354|Ga0070675_100103041All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2405Open in IMG/M
3300005434|Ga0070709_11172564Not Available616Open in IMG/M
3300005435|Ga0070714_101186917All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia744Open in IMG/M
3300005435|Ga0070714_101277247Not Available716Open in IMG/M
3300005435|Ga0070714_101478615Not Available663Open in IMG/M
3300005435|Ga0070714_102469901All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura flavalba504Open in IMG/M
3300005436|Ga0070713_100872950Not Available864Open in IMG/M
3300005436|Ga0070713_101147729All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium751Open in IMG/M
3300005436|Ga0070713_102268389All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura flavalba525Open in IMG/M
3300005439|Ga0070711_100819092All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia790Open in IMG/M
3300005440|Ga0070705_100968537All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria688Open in IMG/M
3300005445|Ga0070708_100008529All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae8234Open in IMG/M
3300005450|Ga0066682_10446425All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium823Open in IMG/M
3300005467|Ga0070706_100219719All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales1774Open in IMG/M
3300005468|Ga0070707_100443591All Organisms → cellular organisms → Bacteria1258Open in IMG/M
3300005468|Ga0070707_102121471All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Thermomonospora → Thermomonospora curvata529Open in IMG/M
3300005543|Ga0070672_100287426All Organisms → cellular organisms → Bacteria1392Open in IMG/M
3300005578|Ga0068854_100638997All Organisms → cellular organisms → Bacteria912Open in IMG/M
3300005937|Ga0081455_10940809All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura flavalba536Open in IMG/M
3300006028|Ga0070717_11435282All Organisms → cellular organisms → Bacteria626Open in IMG/M
3300006175|Ga0070712_100486581All Organisms → cellular organisms → Bacteria1032Open in IMG/M
3300006175|Ga0070712_101508223All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura flavalba587Open in IMG/M
3300006175|Ga0070712_101680371Not Available556Open in IMG/M
3300006176|Ga0070765_100038304All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae3812Open in IMG/M
3300006176|Ga0070765_100466159All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales1185Open in IMG/M
3300006354|Ga0075021_10305984All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales986Open in IMG/M
3300006804|Ga0079221_11300139Not Available572Open in IMG/M
3300006804|Ga0079221_11632058Not Available523Open in IMG/M
3300006806|Ga0079220_11775695Not Available542Open in IMG/M
3300006954|Ga0079219_10484570All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia859Open in IMG/M
3300009683|Ga0116224_10548072Not Available552Open in IMG/M
3300009700|Ga0116217_10714251Not Available620Open in IMG/M
3300010047|Ga0126382_10409834All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1061Open in IMG/M
3300010152|Ga0126318_10539478All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces gilvosporeus862Open in IMG/M
3300010159|Ga0099796_10117462Not Available1019Open in IMG/M
3300010339|Ga0074046_10000347All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia41420Open in IMG/M
3300010341|Ga0074045_10093217All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia2092Open in IMG/M
3300010371|Ga0134125_11900325Not Available647Open in IMG/M
3300010373|Ga0134128_10926646All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia964Open in IMG/M
3300010376|Ga0126381_103837385Not Available587Open in IMG/M
3300010396|Ga0134126_11531160All Organisms → cellular organisms → Bacteria735Open in IMG/M
3300010399|Ga0134127_10478680All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1251Open in IMG/M
3300010867|Ga0126347_1367343Not Available4757Open in IMG/M
3300010876|Ga0126361_11258598Not Available538Open in IMG/M
3300010877|Ga0126356_10159809Not Available557Open in IMG/M
3300012201|Ga0137365_11149887All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura flavalba557Open in IMG/M
3300012210|Ga0137378_10693752Not Available929Open in IMG/M
3300012285|Ga0137370_10724378All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura flavalba618Open in IMG/M
3300012351|Ga0137386_10195630All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1452Open in IMG/M
3300012356|Ga0137371_10049612All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria3245Open in IMG/M
3300012361|Ga0137360_11100449Not Available686Open in IMG/M
3300012477|Ga0157336_1006687All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia796Open in IMG/M
3300012478|Ga0157328_1005667All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia736Open in IMG/M
3300012496|Ga0157353_1051978All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura flavalba501Open in IMG/M
3300012515|Ga0157338_1090208All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Microbispora → unclassified Microbispora → Microbispora sp. GMKU363510Open in IMG/M
3300012930|Ga0137407_11997241All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura flavalba553Open in IMG/M
3300012958|Ga0164299_11326313Not Available552Open in IMG/M
3300013102|Ga0157371_10091697All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2152Open in IMG/M
3300013104|Ga0157370_11690477All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura flavalba568Open in IMG/M
3300013105|Ga0157369_12136119Not Available568Open in IMG/M
3300013296|Ga0157374_11219026All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria774Open in IMG/M
3300014326|Ga0157380_10339874All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1400Open in IMG/M
3300014968|Ga0157379_12374618Not Available529Open in IMG/M
3300014969|Ga0157376_12783292All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura flavalba529Open in IMG/M
3300015372|Ga0132256_101799385All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria721Open in IMG/M
3300016270|Ga0182036_10840280All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria750Open in IMG/M
3300016341|Ga0182035_10745268Not Available856Open in IMG/M
3300016371|Ga0182034_11868710All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales530Open in IMG/M
3300016422|Ga0182039_10586212Not Available973Open in IMG/M
3300016445|Ga0182038_11254223Not Available662Open in IMG/M
3300018468|Ga0066662_11650687Not Available669Open in IMG/M
3300018482|Ga0066669_11734340Not Available574Open in IMG/M
3300019887|Ga0193729_1268427Not Available527Open in IMG/M
3300021403|Ga0210397_10642024Not Available813Open in IMG/M
3300021404|Ga0210389_10088174All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2384Open in IMG/M
3300021404|Ga0210389_10476482Not Available982Open in IMG/M
3300021432|Ga0210384_11228924All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria654Open in IMG/M
3300021475|Ga0210392_10411045All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae987Open in IMG/M
3300024251|Ga0247679_1060724All Organisms → cellular organisms → Bacteria633Open in IMG/M
3300024323|Ga0247666_1040670All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia955Open in IMG/M
3300024347|Ga0179591_1253778All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia2109Open in IMG/M
3300025900|Ga0207710_10313857All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria794Open in IMG/M
3300025915|Ga0207693_10724258Not Available770Open in IMG/M
3300025917|Ga0207660_10303541All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1271Open in IMG/M
3300025922|Ga0207646_10001443All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria29510Open in IMG/M
3300025922|Ga0207646_10370386All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1294Open in IMG/M
3300025922|Ga0207646_10548443All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1040Open in IMG/M
3300025923|Ga0207681_11167897All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → Alienimonas → Alienimonas californiensis647Open in IMG/M
3300025924|Ga0207694_11009452All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia704Open in IMG/M
3300025927|Ga0207687_11497882All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura flavalba580Open in IMG/M
3300025929|Ga0207664_10931849Not Available779Open in IMG/M
3300025929|Ga0207664_11399247All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura flavalba620Open in IMG/M
3300025942|Ga0207689_10002461All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales17250Open in IMG/M
3300025949|Ga0207667_11138911Not Available762Open in IMG/M
3300026041|Ga0207639_11294346All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria684Open in IMG/M
3300026498|Ga0257156_1138624All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura flavalba507Open in IMG/M
3300027031|Ga0208986_1025639All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura flavalba622Open in IMG/M
3300027787|Ga0209074_10201581All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria748Open in IMG/M
3300028787|Ga0307323_10195525All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria730Open in IMG/M
3300028789|Ga0302232_10670369Not Available509Open in IMG/M
3300028793|Ga0307299_10152143All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria871Open in IMG/M
3300028824|Ga0307310_10030755All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium2157Open in IMG/M
3300028875|Ga0307289_10031148All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium2099Open in IMG/M
3300030336|Ga0247826_11522695All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura flavalba543Open in IMG/M
3300030494|Ga0310037_10134809Not Available1127Open in IMG/M
3300030707|Ga0310038_10299308Not Available726Open in IMG/M
3300030707|Ga0310038_10488800Not Available522Open in IMG/M
3300031544|Ga0318534_10267709All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales985Open in IMG/M
3300031713|Ga0318496_10827095All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales510Open in IMG/M
3300031718|Ga0307474_10295722All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1247Open in IMG/M
3300031720|Ga0307469_10344111All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1249Open in IMG/M
3300031723|Ga0318493_10549669All Organisms → cellular organisms → Bacteria641Open in IMG/M
3300031740|Ga0307468_101200889Not Available684Open in IMG/M
3300031740|Ga0307468_101603573All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura flavalba608Open in IMG/M
3300031744|Ga0306918_11331528All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria552Open in IMG/M
3300031747|Ga0318502_10559590All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae687Open in IMG/M
3300031798|Ga0318523_10533880All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria579Open in IMG/M
3300031819|Ga0318568_10969015Not Available525Open in IMG/M
3300031845|Ga0318511_10085717All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1322Open in IMG/M
3300031845|Ga0318511_10577832All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae523Open in IMG/M
3300031910|Ga0306923_11050188All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales881Open in IMG/M
3300031946|Ga0310910_10574335Not Available894Open in IMG/M
3300031947|Ga0310909_11250629All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces gilvosporeus599Open in IMG/M
3300032043|Ga0318556_10583865All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Sphaerimonospora → Sphaerimonospora mesophila583Open in IMG/M
3300032054|Ga0318570_10079054All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae1411Open in IMG/M
3300032205|Ga0307472_101156649All Organisms → cellular organisms → Bacteria736Open in IMG/M
3300032261|Ga0306920_102614889Not Available692Open in IMG/M
3300032261|Ga0306920_103258170All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae606Open in IMG/M
3300032770|Ga0335085_10659051Not Available1169Open in IMG/M
3300032770|Ga0335085_11681680All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium654Open in IMG/M
3300032828|Ga0335080_10059899All Organisms → cellular organisms → Bacteria4213Open in IMG/M
3300032828|Ga0335080_11557375Not Available652Open in IMG/M
3300032892|Ga0335081_12245092Not Available573Open in IMG/M
3300032892|Ga0335081_12502376Not Available533Open in IMG/M
3300032898|Ga0335072_10983212All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia777Open in IMG/M
3300032954|Ga0335083_10673570Not Available843Open in IMG/M
3300032955|Ga0335076_10299785All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1496Open in IMG/M
3300033134|Ga0335073_10764500All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1043Open in IMG/M
3300033158|Ga0335077_10058659All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales4647Open in IMG/M
3300033158|Ga0335077_10428664Not Available1414Open in IMG/M
3300033289|Ga0310914_10971888All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces gilvosporeus749Open in IMG/M



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil14.48%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere12.41%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil8.28%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil6.21%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil6.21%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil4.14%
Agricultural SoilEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil4.14%
Peatlands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil3.45%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil3.45%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil3.45%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil2.76%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere2.07%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere2.07%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere2.07%
Boreal Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil2.07%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil1.38%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil1.38%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil1.38%
Bog Forest SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil1.38%
SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Soil1.38%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere1.38%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere1.38%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere1.38%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere1.38%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere1.38%
SoilEnvironmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil0.69%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds0.69%
Unplanted SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Unplanted Soil0.69%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil0.69%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil0.69%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil0.69%
PalsaEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa0.69%
Tabebuia Heterophylla RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere0.69%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere0.69%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.69%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.69%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere0.69%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere0.69%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300004081Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)EnvironmentalOpen in IMG/M
3300005166Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123EnvironmentalOpen in IMG/M
3300005331Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaGHost-AssociatedOpen in IMG/M
3300005337Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaGEnvironmentalOpen in IMG/M
3300005354Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaGHost-AssociatedOpen in IMG/M
3300005434Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaGEnvironmentalOpen in IMG/M
3300005435Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaGEnvironmentalOpen in IMG/M
3300005436Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaGEnvironmentalOpen in IMG/M
3300005439Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaGEnvironmentalOpen in IMG/M
3300005440Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaGEnvironmentalOpen in IMG/M
3300005445Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaGEnvironmentalOpen in IMG/M
3300005450Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131EnvironmentalOpen in IMG/M
3300005467Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaGEnvironmentalOpen in IMG/M
3300005468Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaGEnvironmentalOpen in IMG/M
3300005543Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaGHost-AssociatedOpen in IMG/M
3300005578Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2Host-AssociatedOpen in IMG/M
3300005937Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1Host-AssociatedOpen in IMG/M
3300006028Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaGEnvironmentalOpen in IMG/M
3300006175Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaGEnvironmentalOpen in IMG/M
3300006176Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5EnvironmentalOpen in IMG/M
3300006354Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012EnvironmentalOpen in IMG/M
3300006804Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200EnvironmentalOpen in IMG/M
3300006806Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100EnvironmentalOpen in IMG/M
3300006954Agricultural soil microbial communities from Georgia to study Nitrogen management - GA ControlEnvironmentalOpen in IMG/M
3300009683Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_b_LC metaGEnvironmentalOpen in IMG/M
3300009700Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaGEnvironmentalOpen in IMG/M
3300010047Tropical forest soil microbial communities from Panama - MetaG Plot_30EnvironmentalOpen in IMG/M
3300010152Soil microbial communities from Oklahoma, USA to study soil gas exchange rates - GP-OK-ARM metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010159Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3EnvironmentalOpen in IMG/M
3300010339Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM3EnvironmentalOpen in IMG/M
3300010341Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2EnvironmentalOpen in IMG/M
3300010371Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1EnvironmentalOpen in IMG/M
3300010373Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4EnvironmentalOpen in IMG/M
3300010376Tropical forest soil microbial communities from Panama - MetaG Plot_28EnvironmentalOpen in IMG/M
3300010396Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2EnvironmentalOpen in IMG/M
3300010399Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3EnvironmentalOpen in IMG/M
3300010867Boreal forest soil eukaryotic communities from Alaska, USA - C3-5 Metatranscriptome (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300010876Boreal forest soil eukaryotic communities from Alaska, USA - W5-5 Metatranscriptome (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300010877Boreal forest soil eukaryotic communities from Alaska, USA - W3-2 Metatranscriptome (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300012201Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaGEnvironmentalOpen in IMG/M
3300012210Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaGEnvironmentalOpen in IMG/M
3300012285Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaGEnvironmentalOpen in IMG/M
3300012351Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaGEnvironmentalOpen in IMG/M
3300012356Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaGEnvironmentalOpen in IMG/M
3300012361Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaGEnvironmentalOpen in IMG/M
3300012477Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.3.yng.040610Host-AssociatedOpen in IMG/M
3300012478Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.9.old.080610Host-AssociatedOpen in IMG/M
3300012496Unplanted soil (control) microbial communities from North Carolina - M.Soil.4.yng.090610EnvironmentalOpen in IMG/M
3300012515Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.7.yng.070610Host-AssociatedOpen in IMG/M
3300012930Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012958Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MGEnvironmentalOpen in IMG/M
3300013102Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaGHost-AssociatedOpen in IMG/M
3300013104Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaGHost-AssociatedOpen in IMG/M
3300013105Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaGHost-AssociatedOpen in IMG/M
3300013296Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaGHost-AssociatedOpen in IMG/M
3300014326Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaGHost-AssociatedOpen in IMG/M
3300014968Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaGHost-AssociatedOpen in IMG/M
3300014969Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaGHost-AssociatedOpen in IMG/M
3300015372Soil combined assemblyHost-AssociatedOpen in IMG/M
3300016270Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080EnvironmentalOpen in IMG/M
3300016341Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170EnvironmentalOpen in IMG/M
3300016371Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172EnvironmentalOpen in IMG/M
3300016422Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111EnvironmentalOpen in IMG/M
3300016445Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108EnvironmentalOpen in IMG/M
3300018468Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111EnvironmentalOpen in IMG/M
3300018482Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118EnvironmentalOpen in IMG/M
3300019887Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c2EnvironmentalOpen in IMG/M
3300021403Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-OEnvironmentalOpen in IMG/M
3300021404Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-OEnvironmentalOpen in IMG/M
3300021432Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-MEnvironmentalOpen in IMG/M
3300021475Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-OEnvironmentalOpen in IMG/M
3300024251Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK20EnvironmentalOpen in IMG/M
3300024323Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK07EnvironmentalOpen in IMG/M
3300024347Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300025900Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025915Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025917Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025922Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025923Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025924Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025927Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025929Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025942Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025949Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026041Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026498Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-49-AEnvironmentalOpen in IMG/M
3300027031Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM1_O2 (SPAdes)EnvironmentalOpen in IMG/M
3300027787Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter (SPAdes)EnvironmentalOpen in IMG/M
3300028787Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_381EnvironmentalOpen in IMG/M
3300028789Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N2_3EnvironmentalOpen in IMG/M
3300028793Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_159EnvironmentalOpen in IMG/M
3300028824Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197EnvironmentalOpen in IMG/M
3300028875Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_143EnvironmentalOpen in IMG/M
3300030336Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day1EnvironmentalOpen in IMG/M
3300030494Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG (v2)EnvironmentalOpen in IMG/M
3300030707Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG (v2)EnvironmentalOpen in IMG/M
3300031544Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26EnvironmentalOpen in IMG/M
3300031713Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22EnvironmentalOpen in IMG/M
3300031718Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05EnvironmentalOpen in IMG/M
3300031720Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515EnvironmentalOpen in IMG/M
3300031723Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23EnvironmentalOpen in IMG/M
3300031740Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05EnvironmentalOpen in IMG/M
3300031744Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)EnvironmentalOpen in IMG/M
3300031747Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22EnvironmentalOpen in IMG/M
3300031798Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19EnvironmentalOpen in IMG/M
3300031819Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21EnvironmentalOpen in IMG/M
3300031845Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18EnvironmentalOpen in IMG/M
3300031910Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)EnvironmentalOpen in IMG/M
3300031946Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172EnvironmentalOpen in IMG/M
3300031947Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000HEnvironmentalOpen in IMG/M
3300032043Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24EnvironmentalOpen in IMG/M
3300032054Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f23EnvironmentalOpen in IMG/M
3300032205Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05EnvironmentalOpen in IMG/M
3300032261Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)EnvironmentalOpen in IMG/M
3300032770Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5EnvironmentalOpen in IMG/M
3300032828Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4EnvironmentalOpen in IMG/M
3300032892Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5EnvironmentalOpen in IMG/M
3300032898Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.1EnvironmentalOpen in IMG/M
3300032954Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.2EnvironmentalOpen in IMG/M
3300032955Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5EnvironmentalOpen in IMG/M
3300033134Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2EnvironmentalOpen in IMG/M
3300033158Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1EnvironmentalOpen in IMG/M
3300033289Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
Ga0063454_10017008023300004081SoilMTCGLVSCYTKPAGLRSLVVCPPLAFCAGSVLAQLITAADTFSALTGILVMLGGSALWLFTGTGLTMAIAFGRGWRPGLPGRLLGNLRVALRDARPRGDRWIERR*
Ga0066674_1054808013300005166SoilLTGRGAAVALFAACFLGLLIAAWTGWDLLADALFVMTCGLVTCYTRASGLRGLVVCPPLAFLAGSVLAQAITAADAFSAATGVLITLGLSAPWLFTGTGLTVAIALGRGWRPELAVLASLRAALRDIRPRGDRWIE
Ga0070670_10113500723300005331Switchgrass RhizosphereYTRASGLRGVVVCPPLTFLAGSILAQAITAADAFSAAAGILVTLGTSAPWLFTGTGLTVVIALGRGWRPELAGLRQTVRDLRPRGGRWIERR*
Ga0070682_10154213713300005337Corn RhizosphereLLIAAWTGWDLLADALFVMACGLVTCYTRASGLRGVVVCPPLTFLVGSVLAQVITAADAFSAATGILITLGTSAPWLFTGTGLTVVIALGRGWRPELAVLANLREAVRDIRPRGHRWVERR*
Ga0070675_10010304133300005354Miscanthus RhizosphereLFAACFLSLLIAAWTGWDLLADALFVMTCGLVTCYTRASGLRGVVVCPPLTFLAGSILAQAITAADAFSAAAGILVTLGTSAPWLFTGTGLTVVIALGRGWRPELAGLRQVVRDLRPRGGRWIERR*
Ga0070709_1117256423300005434Corn, Switchgrass And Miscanthus RhizosphereLLADAIFVMACGLVACYTRASGLRGVVVCPPLAFLAGSVLAQLITAADAFAAATGILVTLGTSAPWLFTGTGLTMAIALGRGWRPKLATGMVANLRQALRDIRPRGDRWVERR*
Ga0070714_10118691713300005435Agricultural SoilCFLSLLIAAWTGWDLLADALFVMTCGLVTCYTRASGLRGVVVCPPLTFLAGSILAQAITAADAFSAAAGILVTLATSAPWLFTGTGLTVVIALGRGWRPELAVLANLREAVRDMRPRGGRWIERR*
Ga0070714_10127724723300005435Agricultural SoilLLADAIFVMACGLVACYTRASGLRGVVVCPPLAFLAGSVLAQLITAADAFAAATGILVTLGTSAPWLFTGTGLTMAIALGRGWRPELATGMVANLREALRDIRPRGGRWVERR*
Ga0070714_10147861523300005435Agricultural SoilAACFLSLLIAAWTGWDLLADALFVMTCGLVTCYTRASGLRGVVVCPPLAFLAGSVLAQLITAADAFSAATGILITLGTSAPWLFTGTGLTVAIALGRGWRPELVTSMLGNLRAALRDIRPRGDRWVERR*
Ga0070714_10246990113300005435Agricultural SoilACFLSLLIAAWTGWDLLADALFVMTCGLVTCYTRASGLRGLVVCPPLTFLAGSILAQVITAADAFSAAAGILVTLGTSAPWLFTGTALTVVIALGRGWRPELASLREAVRDMRPRGGRWIERR*
Ga0070713_10087295023300005436Corn, Switchgrass And Miscanthus RhizosphereTRASGLRGVVVCPPLAFLAGSVLAQLITAADAFAAATGILVTLGTSAPWLFTGTGLTMAIALGRGWRPELATGMVANLREALRDIRPRGGRWVERR*
Ga0070713_10114772923300005436Corn, Switchgrass And Miscanthus RhizosphereIAAWTGWDLLADALFVMTCGLVTCYTRVSGLRGVVVCPPLTFLAGSVLAQVITAADAFSAAAGILVTLGTSAPWLFTGTGLTVVIALGRGWRPELAVLANLREAVRDIRPRGHRWVERR*
Ga0070713_10226838913300005436Corn, Switchgrass And Miscanthus RhizosphereVALFAACFLSLLIAAWTGWDLLADALFVMTCGLVACYTRASGLRGLVVCPPLTFLAGSILAQAITAADAFSAAAGILVTLGTSAPWLFTGTGLTMVIALGRGWRPELAVLANLREAVRDIRPRGGRWIERR*
Ga0070711_10081909223300005439Corn, Switchgrass And Miscanthus RhizosphereLTGRGAAVALFAACFLSLLIAAWTGWDLLADALFVMTCGLVTCYTRASGLRGVVVCPPLTFLAGSILAQAITAADAFSAAAGILVTLGTSAPWLFTGTGLTVVIALGRGWRPELAVLANLREAVRDMRPRGGRWIERR*
Ga0070705_10096853723300005440Corn, Switchgrass And Miscanthus RhizosphereALFAACFLGLLIAAWTGWNLLADAIFVMACGLVACYTRASGLRGVVVCPPLAFLAGSVLAQLITAADAFAAATGILVTLGTSAPWLFTGTGLTMAIALGRGWRPELATGMLASLREALGNIRRGDRWTERR*
Ga0070708_10000852923300005445Corn, Switchgrass And Miscanthus RhizosphereMTCGLVACYTRVSGLRGLVVCPPLAFLGGSVLAQLITAADTFSAATGILITLGTSAPWLFTGTGLVVAIALGRGWRPELPAIGVLGNLRDALRDTWPRGDR*
Ga0066682_1044642523300005450SoilCFLGLLIAAWTGWDLLADALFVMTCGLVTCYTRARGLRGLVVCPPLAFLAGSVLAQAITAADAFSAATGILVTLGISAPWLFTGTGLTVAIALGRGWRPELAVLASLRAALRDIRPRGDRWIERR*
Ga0070706_10021971933300005467Corn, Switchgrass And Miscanthus RhizosphereALFVMTCGLVTCYTRARGLRGLVVCPPLAFLAGSVLAQAITAADAFSAATGVLITLATSAPWLFTGAGLTVAIALGRGWRPGLAVLASLRGALRDIRPRGHRWIERR*
Ga0070707_10044359133300005468Corn, Switchgrass And Miscanthus RhizosphereTRASGLRGVVVCPPLAFLAGSVLAQLITAADAFAAATGILVTLGTSAPWLFTGTGLTMAIALGRGWRPELATGMVANLRQALRDIRPRRDRWVERR*
Ga0070707_10212147113300005468Corn, Switchgrass And Miscanthus RhizosphereMTCGLVTCYTRASGLRGVVVCPPLTFLAGSILAQAITAADAFSAAAGILVTLGTSAPWLFTGTGLTVVIALGRGWRPELAGLRQVVRDLRPRGGRWIERR*
Ga0070672_10028742623300005543Miscanthus RhizosphereLSLLIAAWTGWDLLADALFVMACGLVTCYTRASGLRGVVVCPPLTFLAGSILAQVITAADAFSAAAGILVTLGTSAPWLFTGTGLTVVIALGRGWRPELAGLRQTVRDLRPRGGRWIERR
Ga0068854_10063899713300005578Corn RhizosphereAWTGWDLLADALFVMTCGLVTCYTRASGLRGVVVCPPLTFLAGSILAQAITAADAFSAAAGILVTLGTSAPWLFTGTGLTVVIALGRGWRPELAGLRQTVRDLRPRGGRWIERR*
Ga0081455_1094080913300005937Tabebuia Heterophylla RhizosphereGRGAAVTLFAACFLGLLIAAWTGWDLLADALFVMTCGLVTCYTRVSGLRGLVVCPPLAFLAGSVLAQVITAADGFSAAAGILVTLGTSAPWLFTGTGLTVVIALGRGWRPELAGLANLREAMRDIRPRGHRWVERR*
Ga0070717_1143528213300006028Corn, Switchgrass And Miscanthus RhizosphereWTGWDLLADALFVMTCGLVTCYTRASGLRGLVVCPPLTFLAGSILAQVITAADAFSAAAGILVTLGTSAPWLFTGTALTVVIALGRGWRPELASLREAVRDMRPRGGRWIERR*
Ga0070712_10048658113300006175Corn, Switchgrass And Miscanthus RhizosphereTRASGLRGVVVCPPLAFLAGSVLAQLITAADAFAAATGILVTLGTSAPWLFTGTGLTMAIALGRGWRPELVTGMVAHLRQALRDIRPRGDRWVERR*
Ga0070712_10150822313300006175Corn, Switchgrass And Miscanthus RhizosphereVALFAACFLSLLIAAWTGWDLLADALFVMTCGLVTCYTRPSGLRGVVVCPPLTFLAGSILAQAITAADAFSAAAGILVTLGTSAPWLFTGTGLTVVIALGRGWRPELAGLRQTVRDLRPRSGRWIERR*
Ga0070712_10168037113300006175Corn, Switchgrass And Miscanthus RhizosphereCGLVACYTRASGLRGVVVCPPLAFLAGSVLAQLITAADAFAVATGILVTLGSSAPWLFTGTALTMAIALGRGWRPELASGMLANLRAALRDIRPRGDRWVKRR*
Ga0070765_10003830453300006176SoilLIAAWTGWSVFADVMFVMTCGVVTCYTRGSGLRVVVVCPPLAFFAASVLAQLITAPDTFSAAEGILVTLGDSALWLFTGTALVIAIALGRGYRPGKPAIPQLSNLREALRDSWPPRGDRWGRRR*
Ga0070765_10046615923300006176SoilCFLGLLIAAWTGWDLLADVIFVMACGLVACYTRPSGLRGLVVCPPLAFFAGSVLAQLLTAPDTFSAVTGILVTLALSAPWLFTGAGLTVVIALGRGWRPELPAIGVLGGLREALRDPRPRG*
Ga0075021_1030598423300006354WatershedsCFFSLLVAAWTGWNTFADVMFVISCGVVTCYTRVSGLRAVVVCPPLAFFAGSVLAQVLTAPDTFSAATGILVTLADSALWLFTGTALVIAIALGRGYRPEVRAIPLLSKLHGAVWDLWSARGDRWGRRR*
Ga0079221_1130013923300006804Agricultural SoilAACFLSLLIAAWTGWDLLADALFVMTCGLVTCYTRARGLRGLVVCPPLAFLAGSVLAQAITAADGFSAAVGVLVTLATSAPWLFTGAGLTVAIALGRGWRPELAGLVSLRHALRDIRSRGHRWIERR*
Ga0079221_1163205823300006804Agricultural SoilAGLRSVVVCPPLAFCAGSILAQLITAPDTFSALAGVLITLGTSTLWLFTGTALTMAIALGRGWRPELLATVLGNLGVALRERWPRGDRWVERRLPVPQERQLTSRRSGG*
Ga0079220_1177569523300006806Agricultural SoilFAACFLSLLLAAWTGWAMLADVALVTTCGLVAGYTRPAGLRSVVVCPPLAFCTGSILAQLITAPDTFAALAGVLITLGTSTLWLFTSTVLTMAIALGRGWRPKLPAAVLGNLRVAPRERRPRGYRWVERR*
Ga0079219_1048457023300006954Agricultural SoilCFLSLLIAAWTGWDLLADALFVMTCGLVTCYTRASGLRGVVVCPPLTFLAGSILAQAITAADAFSAAAGILVTLGTSAPWLFTGTGLTVVIALGRGWRPELAGLRQAVRDLRPRGGRWIERR*
Ga0116224_1054807223300009683Peatlands SoilAWTGWSAFADVMFVMACGVVTCYTRVSGLRTVVVCPPLAFFAGSVLAQVLTAPDTFSAAEGILVTLGSSALWLFTGTALAVAIALGRGYRPKVPEIPQLSNLREALREVWPSRSERADRWVRRR*
Ga0116217_1071425113300009700Peatlands SoilSLLIAAWTGWNVFADVMFVMSCGVVTCYTRVSGLRAVVVCPPLAFFAGSVLAQLITAPDTFSAATGILITLGSSTLWLFTGTALVAAIALGRGYRPGRPGRPGWPAIPQLGHLREALKDAWLSWSERVRRR*
Ga0126382_1040983423300010047Tropical Forest SoilPPRPRPSVTLTSRGAVVALLAVCFLSLLLAAVTGWSVVADAVFVMACGLVACYTRVSGLRTLVVCPPLAFFTGSLLAQVITAPDSFSAVVGILITLGSSAPWLFTGTALAVVIALGRGWRPGLPPLPLLSNLREALRALRSRGDRLLTRCSRSSV*
Ga0126318_1053947823300010152SoilWDLLADALFVMTCGLVTCYTRASGLRGLVVCPPLAFLAGSVLAQAITAADAFSAAAGILVTLGTSAPWLFTGTGLTVVIALGRGWRPELARLRQAVRDMRPRGGRWIERR*
Ga0099796_1011746213300010159Vadose Zone SoilTCGLVTCYTRASGLRGVVMCPPLAFLAGSVLAQLITAADAFAAATGILVTLGTSAPWLFTGTGLTVVIALGRGWRPGLATGMLASLREALGNIRPRGDRR*
Ga0074046_10000347343300010339Bog Forest SoilVVALFAACFLSLLFTAWTGWSAFADVMFVMTCGVVTCYTRFSGLRAVVVCPPLAFFAGTVLTQVLTAPDSFSAAEGILVTLGSSALWLFTGTALVAAIALGRGYRPKVPAVPLLSDLHEALRDVRPRADRWSRRR*
Ga0074045_1009321713300010341Bog Forest SoilVVALFAACFLSLLFTAWTGWSAFADVMFVMTCGVVTCYTRFSGLRAVVVCPPLAFFAGTVLTQVLTAPDSFSAAEGILVTLGSSALWLFTGTALVAAIALGRGYRPKVPAVPLLSDLHEALRDVRPRADRWSRRR
Ga0134125_1190032523300010371Terrestrial SoilAWTGWDLLADAMFVMTCGLVACYTRVSGLRGLVVCPPLAFLAGSVLAQAITAADAFSAATGVLVTLGTSAPWLFTGTGLTVAIALGRGWRPELAVLANLREALRDFRPRGGRWIERR*
Ga0134128_1092664623300010373Terrestrial SoilVVALFAACFLSLLLAAWTGWAMLADVVLVMTCGFVACYTRPAGLRSVVICPPLAFCTGSILAQLITAPDTFSALAGVLITLGTSTLWLFTGTVLTMAIAFGRGWRPELPATVLGN
Ga0126381_10383738523300010376Tropical Forest SoilFAACFLALLIAAWTGWGLLADVVFVMTSGLVACYTRASGLRGLVVCPPLAFLAGSVLAQLLTAPDAFSFVTGILITLGISAPWLFTGTGLTVVIALGRGWRPERPAFGAFGDLNRALRDLRPRGGQRARRR*
Ga0134126_1153116023300010396Terrestrial SoilFAACFLGLLIAAWTGWDLLADALFVMACGLVTCYTRASGLRGVVVCPPLTFLAGSVLAQVITAADAFSAATGILITLGTSAPWLFTGTGLTVVIALGRGWRPELAVLANLREAVRDIRPRGHRWVERR*
Ga0134127_1047868023300010399Terrestrial SoilVTCYTRASGLRGVVVCPPLAFLAGSILAQAITAADAFSAAAGILVTLGTSAPWLFTGTGLTVVIALGRGWRPELAGLRQVVRDLRPRGGRWIERR*
Ga0126347_136734323300010867Boreal Forest SoilVALFAACFGSLLFAAWTGWAVFADVVFVMTCGLVSCYTKLAGLRSLVVCPPLAFCAGTVLAQVITAADTFSALTGILVTLGGSALWLFTGTGLSMAIAFGRGWRPELPARLLGSLRAALRDMRPRGDRWTERR*
Ga0126361_1125859813300010876Boreal Forest SoilGAVVVLFAACLLGLLAAAWTGWNLLADVTFVMACGLVACYTRTSGLRGVVVCPPLAFFAGSVLAQLLTEPDTFSAAAGILVTLGSSAPWLFTGTALTVAIALGRGWWPAVLAIGVLGNLREALRDVRPRGDRWIRRRLPLAATARRYSASSAGALR*
Ga0126356_1015980923300010877Boreal Forest SoilVFVMTCGLVSCYTKPAGLRSMVVCPPLAFCAGAVLAQLITAADTFSALTGILVTLGGSALWLFTGTGLSMAIAFGRGWRPELPARLLGSLRAALRDMRPRGDRWTERR*
Ga0137365_1114988713300012201Vadose Zone SoilVALFAACFLGLLIAAWTGWDLLADAVFVMTCGLVTCYTRVSGLRGVVVCPPLAFLTGSVLAQLIIAADAFSAATGILVTLGTSAPWLFTGTGLTVAIALGRGWRPELATGVLGNLRAALRDVRPRGDRWVERR*
Ga0137378_1069375213300012210Vadose Zone SoilCYTRVSGLRGVVVCPPLAFLTGSVLAQLIIAADAFSAATGILVTLGTSAPWLFTGTGLTVAIALGRGWRPELATGVLGNLRAALRDVRPRGDRWVERR*
Ga0137370_1072437813300012285Vadose Zone SoilVALFAACFLGLLIAAWTGWDLLADALFVMTCGLVTCYTRASGLRGLVVCPPLAFLAGSVLAQAITAADAFSAAVGILVTLGTSAPWLFTGTGLTVAIALGRGWRPELATGVLGNLRAALRDVRPRGDRWVERR*
Ga0137386_1019563013300012351Vadose Zone SoilALFAACFLGLLIAAWTGWDLLADAVFVMTCGLVTCYTRARGLRGVVVCPPLAFLAGSVLAQAITAADAFSAATGILVTLGTSAPWLFTGTGLTVAIALGRGWRPELAVLASLRGALRDIRPRGDRWVERR*
Ga0137371_1004961243300012356Vadose Zone SoilLFAACFLGLLIAAWTGWDLLADAVFVMTCGLVTCYTRVSGLRGVVVCPPLAFLTGSVLAQLIIAADAFSAATGILVTLGTSAPWLFTGTGLTVAIALGRGWRPGLLNSGVAGNLRAALRDVRPRGDRWVERR*
Ga0137360_1110044923300012361Vadose Zone SoilVALFAACFLGLLIAAWTGWDLLADAVFVMTCGLVTCYTRASGLRGVVMCPPLAFLAGSVLAQLITAADAFATATGILVTLGTSAPWLFTGTGLTMAIALGRGWRTELATGMLASLREALGNIRPRGVRR*
Ga0157336_100668713300012477Arabidopsis RhizosphereALFVMTCGLVTCYTRASGLRGVVVCPPLAFLAGSVLAQVITAADAFSAAVGILVTLGTSAPWLFTGTGLTVVIALGRGWRPELAVLAHLREAVRDLRPRSGRWIERR*
Ga0157328_100566723300012478Arabidopsis RhizosphereGAAVALFAACFLSLLITAWTGWDLLADALFVMTCGLVTCYTRPSGPRGVVVCPPLTFLAGSILAQAITAADAFSAAAGILVTLGTSAPWLFTGTGLTVVIALGRGWRPELAGLRQTVRDLRPRGGRWIERR*
Ga0157353_105197813300012496Unplanted SoilACFLSLLIAAWTGWDLLADALFVMTCGLVTCYTRASGLRGVVVCPPLTFLAGSILAQAITAADAFSAAAGILVTLGTSAPWLFTGTGLTVVIALGRGWRPELAGLRQTVRDLRPRGGRWIERR*
Ga0157338_109020813300012515Arabidopsis RhizosphereGLVTCYTRASGLRGVVVCPPLTFLAGSILAQAITAADAFSAAVGILVTLGTSAPWLFTGTGLTVVIALGRGWRPELAALAHLREAVRDLRPRSGRWIERR*
Ga0137407_1199724113300012930Vadose Zone SoilAACFLGLLIAAWTGWDLLADALFVMTCGLVTCYTRARGLRGVVVCPPLAFLAGSVLAQAITAADAFSAATGVLVTLGTSAPWLFTGTGLTVAIALGRGWRPELALLANLREALRDFRPRGGRWVERR*
Ga0164299_1132631313300012958SoilVACYTRASGLRGVVVCPPLAFLAGSVLAQLITAADAFAAATGILVTLGTSAPWLFTGTGLTMAIALGRGWRPELVTGMVAHLRQALRDIRPRGDRWVERR*
Ga0157371_1009169723300013102Corn RhizosphereLFAACFLSLLIAAWTGWDLLADALFVMTCGLVTCYTRASGLRGVVVCPPLTFLAGSILAQAITAADAFSAAAGILVTLGTSAPWLFTGTGLTVVIALGRGWRPELAVLANLREAVRDMRPRGGRWIERR*
Ga0157370_1169047713300013104Corn RhizosphereVALFASCFLGLLIAAWTGWNLLADAIFVMACGLVACYTRASGLRGVVVCPPLAFLAGSVLAQLITAADAFAAATGILVTLGTSAPWLFTGTGLTMAIALGRGWRPELVTGMVAHLRQALRDIRPRGDRWVERR*
Ga0157369_1213611913300013105Corn RhizosphereLVACYTRASGLRGVVVCPPLAFLAGSVLAQLITAADAFAAATGILVTLGTSAPWLFTGTGLTMAIALGRGWRPELAVLASLRGALGDIRPRGDRWVERR*
Ga0157374_1121902613300013296Miscanthus RhizosphereTCGLVTCYTRARGLRGVVVCPPLAFLAGSVLAQVITAADAFSAATGILITLGTSAPWLFTGTGLTVVIALGRGWRPELAVLANLREAVRDIRPRGHRWVERR*
Ga0157380_1033987423300014326Switchgrass RhizosphereLLIAAWTGWDLLADALFVMTCGLVTCYTRPSGLRGVVVCPPLTFLAGSILAQAITAADAFSAAAGILVTLGTSAPWLFTGTGLTVVIALGRGWRPELAGLRQIVRDLRPRGGRWIERR*
Ga0157379_1237461813300014968Switchgrass RhizosphereAACFLGLLIAAWTGWDLLADALFVMTCGLVTCYTRPSGLRGVVVCQPLTFLAGSILAQAITAADAFSAATGVLVTLGTSAPWLFTGTGLTVAIALGRGWRPELAVLANLRGALGDIRPRGDRWVERR*
Ga0157376_1278329213300014969Miscanthus RhizosphereLLVDALFVMACGLVTCYTRASGLRGVVVCPPLTFLAGSVLAQVITAADAFSAAAGILVTLGTSAPWLFTGTGLTVVIALGRGWRPELAVLANLREAVRDMRPRGGRWIERR*
Ga0132256_10179938513300015372Arabidopsis RhizosphereSLLIAAWTGWDLLADALFVMTCGLVTCYTRARGLRGLVVCPPLAFLAGSVLAQAITAADAFSAAAGILITLGTSAPWLFTGTGLTVVIALGRGWRPELAALAHLREAVRDLRPRSGRWIERR*
Ga0182036_1084028023300016270SoilALFAACFLGLLIAAWTGWGLFANAEFVMICGLVACYTRDSGLRGVVVCPPLAFLAGSVLAQLLTAPDAFSATTGILITLGISAPWLFTGTGLTVLIALGRGWRPERLADLLPRRLRGALRSRVSRWRL
Ga0182035_1074526823300016341SoilGGAVALFAACFCGLLIAAWTGWDLLADVIFVMTCGLVACYTRASGLRGVVVCPPLAFFTGSVLAQLLTAPDVFSVVIGILITLGSSALWLFTGTGLTALIALGRGWRPDIPRLGQWLRRR
Ga0182034_1186871013300016371SoilGRGAAVAMFAACFCSLLIAAWTGWNLFADAMFVMTCGLVTCYTRASGLRGVVVCPPLAFFAGSVLAQLLTAPDAFSATTGILITLGISAPWLFTGTGLTVLIALGRGWRPERLADLLPRRLRGALRSRVSRWRL
Ga0182039_1058621223300016422SoilFCGLLIAAWTGWDLLADVIFVMTCGLVACYTRASGLRGVVVCPPLAFFTGSVLAQLLTAPDVFSVVIGILITLGSSALWLFTGTGLTALIALGRGWRPDIPRLGQWLRRR
Ga0182038_1125422313300016445SoilAAWTGWDLLADATFVMTCGLVTCYTRASGLRGLVVCPPLAFFAGSVLAQLLTASDAFSVVIGILITLGISAPWLFTGTGLTVVIALGRGWRPERPAFGDLHRALRDLRPRGGQRARRR
Ga0066662_1165068723300018468Grasslands SoilCGLVTCYTRVSGLRGVVVCPPLAFLAGSVLAQLITAADAFSAAAGIVITLGTSAPWLFTGTGLTVAIALGRGWRPELATGVLGNLRAARR
Ga0066669_1173434023300018482Grasslands SoilLLADALFVVTCGLVTCYTRASGLRGVVVCPPLAFLAGSILAQVITAADAFSAAAGILVTLGTSAPWLFTGTGLTVVIALGRGWRPELASLREAVRDMRPRGGRWIERR
Ga0193729_126842723300019887SoilADAIFVMACGLVACYTRASGLRGVVVCPPLAFLAGSVLAQLMTAADAFAAATGILVTLGTSAPWLFTGTGLTMAIALGRGWRPGLATVMLANLREALRDIRPRGDRWVKRR
Ga0210397_1064202413300021403SoilGRGGAVALFAACFLGLLIAAWTGWDLLADVVFVMACGLVACYTRPSGLRGLVVCPPLAFFAGSVLAQLLTAPDTFSAVTGILVTLALSAPWLFTGAGLTVVIALGRGWRPELPAIGVLGGLREALRDPRPRG
Ga0210389_1008817413300021404SoilLFVMTCGLVACYTRASGLRGLVVCPPLTFLAGSILAQAITAADAFSAAAGILVTLGTSAPWLFTGTGLTVVIALGRGWRPELAVLANLREAVRDMRPRGGRWIERR
Ga0210389_1047648213300021404SoilFAACFLCLLIAAWTGWDLLADAIFVMTCGLVACYTRASGLRGMVVCPPLAFLAGSVLAQLITAADAFAAATGILVTLGSSAPWLFTGTALTMAIALGRGWRPELASGMLANLRTALRDIRPRGDRWVKRR
Ga0210384_1122892413300021432SoilFTACFCGLLIAAWTGWDLLADVMFVMTCGLVACYTRASGLRTVVVCPPLAFFAGSVVAQLLTAPDAFSAATGILITLGISAPWLFTGTGLTVVIALGRGWRPDLPGLGQWVRRR
Ga0210392_1041104523300021475SoilVALFAACFCGLLIAAWTGWDLLADVMFVMTCGLVACYTRASGLRTVVVCPPLAFFAGSVVAQLLTAPDAFSAATGILITLGISAPWLFTGTGLTVVIALGRGWRPDLPGLGQWVRRR
Ga0247679_106072413300024251SoilLADALFVMTCGLVTCYTRASGLRGVVVCPPLTFLAGSILAQAITAADAFSAAAGILVTLGTSAPWLFTGTGLTVVIALGRGWRPELAGLRQTVRDLRPRGGRWIERR
Ga0247666_104067023300024323SoilLLITAWTGWDLLADALFVMTCGLVTCYTRPSGLRGVVVCPPLTFLAGSILAQAITAADAFSAAAGILVTLGTSAPWLFTGTGLTVVIALGRGWRPELAGLRQTVRDLRPRGGRWIERR
Ga0179591_125377833300024347Vadose Zone SoilFLSLLIAAWTGWYLLADALFVMTCGLVTCYTRASGLRGVVVCPPLTFLAGSILAQAITAADAFSAAAGILVTLGTSAPWLFTGTGLTVVIALGRGWRPELALLANLREAVRDMRPRGGRWIERR
Ga0207710_1031385713300025900Switchgrass RhizosphereACFLSLLIAAWTGWDLLADALFVMACGLVTCYTRASGLRGVVVCPPLTFLAGSILAQVITAADAFSAAAGILVTLGTSAPWLFTGTGLTVVIALGRGWRPELAGLRQAVRDLRPRGGRWIERR
Ga0207693_1072425813300025915Corn, Switchgrass And Miscanthus RhizosphereACFLGLLIAAWTGWDLLADAIFVMACGLVACYTRASGLRGVVVCPPLAFLAGSVLAQLITAADAFAAATGILVTLGTSAPWLFTGTGLTMAIALGRGWRPELVTGMVAHLRQALRDIRPRGDRWVERR
Ga0207660_1030354123300025917Corn RhizosphereTCGLVTCYTRASGLRGVVVCPPLTFLAGSILAQAITAADAFSAAAGILVTLGTSAPWLFTGTGLTVVIALGRGWRPELAGLRQVVRDLRPRGGRWIERR
Ga0207646_10001443243300025922Corn, Switchgrass And Miscanthus RhizosphereMTCGLVACYTRVSGLRGLVVCPPLAFLGGSVLAQLITAADTFSAATGILITLGTSAPWLFTGTGLVVAIALGRGWRPELPAIGVLGNLRDALRDTWPRGDR
Ga0207646_1037038613300025922Corn, Switchgrass And Miscanthus RhizosphereFVMACGLVACYTRASGLRGVVVCPPLAFLAGSVLAQLITAADAFAAATGILVTLGTSAPWLFTGTGLTMAIALGRGWRPELVTGMVANLRQALRDIRPRRDRWVERR
Ga0207646_1054844323300025922Corn, Switchgrass And Miscanthus RhizosphereLFAACFCGLLIAAWTGWDLLADAMFVTTCGLVACYTRVSGLRGLVVCPPLAFLGGSVLAQLITAADTFSAATGILITLGTSAPWLFTGTGLTVAIALGRGWRPELVTSMLGNLRAALRGIRPRGDRWVERR
Ga0207681_1116789723300025923Switchgrass RhizosphereLLADALFVMACGLVTCYTRASGLRGVVVCPPLTFLAGSILAQAITAADAFSAAAGILVTLGTSAPWLFTGTGLTVVIALGRGWRPELAVLANLRGALGDIRPRGDRWVERR
Ga0207694_1100945223300025924Corn RhizosphereGAAVALFAACFLSLLIAAWTGWDLLADALFVMTCGLVTCYTRASGLRGVVVCPPLTFLAGSILAQAITAADAFSAAAGILVTLGTSAPWLFTGTGLTVVIALGRGWRPELAVLANLREAVRDMRPRGGRWIERR
Ga0207687_1149788213300025927Miscanthus RhizosphereVLFAACFLSLLIAAWTGWDLLADALFVMTCGLVTCYTRASGLRGVVVCPPLTFLAGSILAQAITAADAFSAAAGILVTLGTSAPWLFTGTGLTVVIALGRGWRPELAGLRQTVRDLRPRGGRWIERR
Ga0207664_1093184913300025929Agricultural SoilGLVACYTRASGLRAVVMCPPLAFLAGSVLAQLITAADAFAVATGILVTLGSSAPWLFTGTALTMAIALGRGWRPELASGMLANLRAALRDIRPRGDRWVKRR
Ga0207664_1139924713300025929Agricultural SoilFLSLLIAAWTGWDLLADALFVMTCGLVACYTRASGLRGLVVCPPLTFLAGSILAQAITAADAFSAAAGILVTLGTSAPWLFTGTGLTMVIALGRGWRPELAVLANLREAVRDIRPRGGRWIERR
Ga0207689_1000246113300025942Miscanthus RhizosphereIAAWTGWDLLADALFVMACGLVTCYTRASGLRGVVVCPPLTFLVGSVLAQVITAADAFSAATGILITLGTSAPWLFTGTGLTVVIALGRGWRPELAVLANLREAVRDIRPRGHRWVERR
Ga0207667_1113891123300025949Corn RhizosphereLLADAIFVMACGLVACYTRASGLRGVVVCPPLAFLAGSVLAQLITAADAFAAATGILVTLGTSAPWLFTGTGLTMAIALGRGWRPELVTGMVANLRQALRDIRPRGDRWVERR
Ga0207639_1129434613300026041Corn RhizosphereALFVMTCGLVTCYTRPSGLRGVVVCPPLTFLAGSILAQAITAADAFSAAAGILVTLGTSAPWLFTGTGLTVVIALGRGWRPELAGLRQVVRDLRPRGGRWIERR
Ga0257156_113862413300026498SoilAIFVMACGLVACYTRASGLRGVVVCPPLAFLAGSVLAQLITAADAFATATGILVTLGTSAPWLFTGTGLTMAIALGRGWRPGLATGMLASLREALGNIRPRGDRR
Ga0208986_102563913300027031Forest SoilFLSLLIAAWTGWDLLADALFVMTCGLVACYTRASGLRGLVVCPPLTFLAGSILAQAITAADAFSAAAGILVTLGTSAPWLFTGTGLTVVIALGRGWRPELAGLANLREAVRDMRPRGGRWIERR
Ga0209074_1020158123300027787Agricultural SoilSLLIAAWTGWDLLADALFVMACGLVTCYTRASGLRGVVVCPPLTFLAGSILAQVITAADAFSAAAGILVTLGTSAPWLFTGTGLTVVIALGRGWRPELAGLRQAVRDLRPRGGRWIERR
Ga0307323_1019552513300028787SoilLVTCYTRASGLRGVVVCPPLTFLAGSVLAQAITAADAFSAAVGILITLGTSAPWLFTGTGLTVVIALGRGWRPELAVLANLREAARDIRPRGHRWVERR
Ga0302232_1067036913300028789PalsaGVVAYYTRASGLRHVVICPPLAFLAGAVCAQLITAPNSFSAAEGLLVTLGTSAPWLFTGTGLTFVIAFSRGYRPDLSGLPLFANLAEAVRNARPSRSRQVRRR
Ga0307299_1015214313300028793SoilFLGLLIAAWTGWDLLADALFVMACGLVTCYTRASGLRGVVVCPPLTFLAGSVLAQAITAADAFSAAVGILITLGTSAPWLFTGTGLTVVIALGRGWRPELAVLANLREAARDIRPRGHRWVERR
Ga0307310_1003075513300028824SoilTCYTRASGLRGVVVCPPLTFLAGSVLAQAITAADAFSAAAGILITLGTSAPWLFTGTGLTVVIALGRGWRPELAVLANLREAARDIRPRGHRWVERR
Ga0307289_1003114823300028875SoilGLVTCYTRARGLRGVVVCPPLAFLAGSVLAQAITAADAFSAAAGILITLGTSAPWLFTGTGLTVVIALGRGWRPELAVLANLREAARDIRPRGHRWVERR
Ga0247826_1152269513300030336SoilLSLLIAAWTGWDLLADALFVMTCGLVTCYTRASGLRGVVVCPPLTFLAGSILAQAITAADAFSAAAGILVTLGTSAPWLFTGTGLTVVIALGRGWRPELAVLANLRDIRPRGHRWVERR
Ga0310037_1013480913300030494Peatlands SoilLFAACFVSLLIAAWTGWSVFADVMFVMACGVVTCYTRVSGLRAVVVCPPLAFFAGSVLAQLITAPDTFSAATGILITLGSSTLWLFTGTALVAAIALGRGYRPGRPGRPGWPAIPQLGHLREALKDAWLSWSERVRRR
Ga0310038_1029930813300030707Peatlands SoilGRGAVVALFAASFLSLLIAAWTGWNVFADVMFVMSCGVVTCYTRVSGLRAVVVCPPLAFFAGSVLAQLITAPDTFSAATGILITLGSSTLWLFTGTALVAAIALGRGYRPGRPGRPGWPAIPQLGHLREALKDAWLSWSERVRRR
Ga0310038_1048880023300030707Peatlands SoilTGRGAVVALFAACFLSLLFAAWTGWSAFADVVFVMTCGVVTCYTRVSGLRAVVVCPPLAFFAGTVLVQVITASDTFSAAAGILVTLGSSALWLFTGTALAVAIALGRGYRPKVPAIPPLINLREALRDVWSAHGDGWRRRR
Ga0318534_1026770913300031544SoilAAWTGWDLLADATFVMTCGLVTCYTRASGLRGVVVCPPLAFLAGSVLAQLLTAPDAFSVATGILITLGLSAPWLFTGTALTVVIALGRGWRPELPAFAGLRGAPRDRRPRG
Ga0318496_1082709513300031713SoilFAACFLGLLIAAWTGWDLFADVLFVMTCGLVACYTRASGLRGLVVCPPLAFFTGSVLAQVLTAPDAFSTATGILITLALSAPWLFTGTGLTVVIALGRGWRPDLPGFGRWVRRR
Ga0307474_1029572213300031718Hardwood Forest SoilGLVACYTRASGLRGVVVCPPLAFLAGSVLAQLLTAADAFAAAVGILVTLASSAPWLFTGTALTMAIALGRGWRPELASGMLANLRAALRDIRPRGDRWVKRR
Ga0307469_1034411113300031720Hardwood Forest SoilADALFVMACGLVTCYTRVSGLRGVVVCPPLTFLAGSVLAQVITAADAFSAAAGILVTLGTSAPWLFTGTGLTVVIALGRGWRPELAVLANLREAARDIRPRGHRWVERR
Ga0318493_1054966923300031723SoilVLVACYTRASGLRGLVVCPPLAFFTGSVLAQVLTAPDGFSAAEGILVTLGSSAPWLFTGTALTVAIALGRGYRPRVPDRSLPGHLRAAGALRPLRPLRPLRLFRPFRPFRPAKRR
Ga0307468_10120088913300031740Hardwood Forest SoilTGWDLLADALFVMTCGLVTCYTRASGLRGVVVCPPLTFLAGSVLAQAITAADAFSAATGVLVTLGTSAPWLFTGTGLTVAIALGRGWRPELAVLASLRGALGDIRPRGDRWVERR
Ga0307468_10160357313300031740Hardwood Forest SoilLADALFVMACGLVTCYTRVGGLRGLVVCPPLTFLAGSVLAQVITAADAFSAAAGILVTLGTSAPWLFTGTGLTVVIALGRGWRPELAVLANLREAVRDIRPRGHRWVERR
Ga0306918_1133152813300031744SoilGRGAAAALFATCFLVLLSAAWTGWDLLADATFVMTCGLVTCYTRASGLRGVVVCPPLAFLAGSVLAQLLTAPDAFSVATGILITLGLSAPWLFTGTALAVVIALGRGWRPELPAFGALGELRDRRPRR
Ga0318502_1055959023300031747SoilFAACFLGLLIAAWTGWGLFANAEFVMICGLVACYTRDSGLRGVVVCPPLAFFAGSVLAQLLTAPDAFSATTGILITLGISAPWLFTGTGLTVLIALGRGWRPERLADLLPRRLRGALRSRVSRWRL
Ga0318523_1053388013300031798SoilAAWTGWDLLADATFVMTCGLVTCYTRASGLRGVVVCPPLAFLAGSVLAQLLTAPDAFSVATGILITLGLSAPWLFTGTALTVVIALGRGWRPELPAFGALGGLRGASRDRRPRR
Ga0318568_1096901513300031819SoilAAALFATCFLVLLIAAWTGWDLLADATFVMTCGLVTCYTRASGLRGVVVCPPLAFLTGSVLAQLLTAPDAFSAATGILITLGLSAPWLFTGTALTVVIALGRGWRPALPAFGALGDPRGALRDRRPRR
Ga0318511_1008571713300031845SoilLLADVVFVMTSGLVACYTRASGLRGLVVCPPLAFFAGSVLAQLLTASDAFSVVIGILITLGISAPWLFTGTGLTVVIALGRGWRPERPAFGDLHRALRDLRPRGGQRARRR
Ga0318511_1057783223300031845SoilRGAVVALFAACFLGLLIAAWTGWGLFANAEFVMICGLVACYTRDSGLRGVVVCPPLAFFAGSVLAQLLTAPDAFSATTGILITLGISAPWLFTGTGLTVLIALGRGWRPERLADLLPRRLREALRSRVSRWR
Ga0306923_1105018823300031910SoilFATCFLVLLIAAWTGWDLLADATFVMTCGLVTCYTRASGLRGVVVCPPLAFLAGSVLAQLLTAPDAFSVATGILITLGLSAPWLFTGTALTVVIALGRGWRPELPAFGALGGLRGASRDRRPRR
Ga0310910_1057433523300031946SoilVALFAVCFLGLLIAAWTGWSAFADVLFVLACVLVACYTRASGLRGLVVCPPLAFFAGSVLAQLLTASDAFSVVIGILITLGISAPWLFTGTGLTVVIALGRGWRPERPAFGDLHRALRDLRPRGGQRARRR
Ga0310909_1125062913300031947SoilCGLVTCYTRASGLRGVVVCPPLAFLAGSVLAQLLTAPDAFSAATGILITLGLSAPWLFTGTALAVVIALGRGWRPELPAFGALGELRDRRPRR
Ga0318556_1058386513300032043SoilVVALFAACFLGLLIAAWTGWGLLADVVFVMTSGLVACYTRASGLRGLVVCPPLAFFAGSVLAQLLTASDAFSVVIGILITLGISAPWLFTGTGLTVVIALGRGWRPERPAFGDLHRALRDLRPRGGQRARRR
Ga0318570_1007905413300032054SoilRGAVVALFAACFLGLLIAAWTGWGLFANAEFVMICGLVACYTRDSGLRGVVVCPPLAFFAGSVLAQLLTAPDAFSATTGILITLGISAPWLFTGTGLTVLIALGRGWRPERLADLLPRRLRGALRSRVSRWRL
Ga0307472_10115664913300032205Hardwood Forest SoilFAACFLGLLIAAWTGWDLLADALFVMACGLVTCYTRASGLRGVVVCPPLTFLAGSVLAQVITAADAFSAATGILITLGTSAPWLFTGTGLTVVIALGRGWRPELAVLANLREAVRDIRPRGHR
Ga0306920_10261488913300032261SoilAAVVLFAACFLGLQIAAWSGRSGLADVIFVVACGVVACYTRVSGLRGLVVCPPLAFFAGTVLTEVLTASDGFSAATGTLITLGDSAMWLFSGTALTAAIALGRGWRPHIGVLSDLGEAVRETRPRADRWTRRP
Ga0306920_10325817013300032261SoilGLFANAEFVMICGLVACYTRDSGLRGVVVCPPLAFFAGSVLAQLLTAPDAFSAATGILITLGISAPWLFTGTGLTVLIALGRGWRPERLADLLPRRLRGALRSRVSRWRL
Ga0335085_1065905123300032770SoilLLADVIFVMTSGLVACYTRASGLRGLVVCPPLAFFAGSVLAQLLTAPDAFSVVTGILITLGLSAPWLFTGTGLTVVIALGRGWRPERPAFGALGDLHRALSDLRPRGNQRVRRR
Ga0335085_1168168013300032770SoilCFLGLLIAAWTGWGLFADVVFVMISGLVACYTRASGLRGLVVCPPLAFLAGSALAQLLTAPDAFSVVTGITVVIALGRGWRPERPAFGAFGDLHRALRDSRPRDGRRIRRR
Ga0335080_1005989953300032828SoilTRPSGLRGVVVCPPLAFLAGSVLAQVITAADAFSAATGILVTLGISAPWLFTGTGLTVTIALGRGWRPEPAVLASLRHALRDIRHRGHRWIERR
Ga0335080_1155737513300032828SoilCGLVTCYTRARGLRGLVVCPPLAFLAGSVLAQAITAADAFSAAVGVLVTLATSAPWLFTGAGLTVAIALGRGWRPELAVLTGLRGAVRDIRPRGRRWIERR
Ga0335081_1224509213300032892SoilFSLLLAAWTGWAMLADVVLVMTGGLVACYTRPAGLRSVVVCPPLAFCTGSILAQLITAPDTFAALAGVLITLGTSTLWLFTGTVLTMAIAFGRGWRPELPATVLGNLRVALRERRPRGDRWVERRLPATQDGAEPVAVSLAQG
Ga0335081_1250237623300032892SoilFVMTCGVVACYTRVSGLRGLVVCPPLAFFAGTVLTQVLTASDGFSAATGILITLGESALWLFTGTALTAAIALGRGWRPHGAAGLGVLSDLRAALRDLRARADRWTRRR
Ga0335072_1098321213300032898SoilGLLIAAWTGWGLFADVVFVMISGLVACYTRASGLRGLVVCPPLAFLAGSVLAQLLTAPDAFSVVTGILITLGISAPWLFTGTGLTVVIALGRGWRPERPAFGAFGDLHRALRDSRPRGGRRVRRR
Ga0335083_1067357023300032954SoilGRGAAVALFAACFSGLLIAAWTGWDLLADALFVMACGLVTCYTRPSGLRGVVVCPPLAFLAGSVLAQVITAADAFSAATGILVTLGISAPWLFTGTGLTVTIALGRGWRPEPAVLASLRHALRDIRHRGHRWIERR
Ga0335076_1029978513300032955SoilDVVFVMISGLVACYTRASGLRGLVVCPPLAFLAGSVLAQLLTAPDAFSVVTGILITLGISAPWLFTGTVLTVVIALGRGWRPERPAFGAFGDLHRALRDVRSRGGQRVRRR
Ga0335073_1076450023300033134SoilSGLRGLVVCPPLAFLAGSVLAQLLTAPDAFSVVTGILITLGISAPWLFTGTGLTVVIALGRGWRPERPAFGAFGDLHRALRDSRPRGGRRVRRR
Ga0335077_1005865973300033158SoilACYTRASGLRGLVVCPPLAFLAGSVLAQLLTAPDAFSVVTGILITLGISAPWLFTGTGLTVVIALGRGWRPERPAFGAFGDLHRALRDVRSRGGQRVRRR
Ga0335077_1042866423300033158SoilLVACYTRASGLRGVVVCPPLAFLAGSVLAQLLTAPDAFSVVTGILITLGLSAPWLFTGTGLTLVIALGRGWRPELPATGVLGSLRGVLRDLRPRDGQRVRRR
Ga0310914_1097188823300033289SoilGAVALFAACFCGLLIAAWTGWDLLADVIFVMTCGLVACYTRASGLRGVVVCPPLAFFTGSVLAQLLTAPDVFSVVIGILITLGSSALWLFTGTGLTALIALGRGWRPDIPRLGQWLRRR


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.