Metagenome Family F050555

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F050555
Family Type	Metagenome
Number of Sequences	145
Average Sequence Length	45 residues
Representative Sequence	HRDGKRFIVKADDLLTAFLSLERDAIASKGANGNATRQNVA
Number of Associated Samples	115
Number of Associated Scaffolds	145

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	6.21 %
% of genes near scaffold ends (potentially truncated)	88.28 %
% of genes from short scaffolds (< 2000 bps)	91.03 %
Associated GOLD sequencing projects	111
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.41

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (95.862 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (22.069 % of family members)
Environment Ontology (ENVO)	Unclassified (35.172 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (45.517 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 37.68% β-sheet: 0.00% Coil/Unstructured: 62.32%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.41
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.41
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 145 Family Scaffolds
PF13884	Peptidase_S74	8.28
PF02965	Met_synt_B12	1.38
PF04226	Transgly_assoc	1.38
PF14026	DUF4242	1.38
PF08734	GYD	1.38
PF00106	adh_short	0.69
PF01436	NHL	0.69
PF00149	Metallophos	0.69
PF04055	Radical_SAM	0.69
PF12680	SnoaL_2	0.69
PF02397	Bac_transf	0.69
PF16347	DUF4976	0.69
PF00005	ABC_tran	0.69
PF08541	ACP_syn_III_C	0.69
PF13899	Thioredoxin_7	0.69
PF02518	HATPase_c	0.69
PF00487	FA_desaturase	0.69
PF14361	RsbRD_N	0.69
PF03466	LysR_substrate	0.69
PF03807	F420_oxidored	0.69
PF09118	GO-like_E_set	0.69

COG ID	Name	Functional Category	% Frequency in 145 Family Scaffolds
COG1410	Methionine synthase I, cobalamin-binding domain	Amino acid transport and metabolism [E]	1.38
COG2261	Uncharacterized membrane protein YeaQ/YmgE, transglycosylase-associated protein family	General function prediction only [R]	1.38
COG4274	Uncharacterized conserved protein, contains GYD domain	Function unknown [S]	1.38
COG1398	Fatty-acid desaturase	Lipid transport and metabolism [I]	0.69
COG2148	Sugar transferase involved in LPS biosynthesis (colanic, teichoic acid)	Cell wall/membrane/envelope biogenesis [M]	0.69
COG3239	Fatty acid desaturase	Lipid transport and metabolism [I]	0.69

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	95.86 %
Unclassified	root	N/A	4.14 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	95.86 %
Unclassified	root	N/A	4.14 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	95.86 %
Unclassified	root	N/A	4.14 %

Name	Rank	Taxonomy	Distribution
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	62.07 %
Unclassified	root	N/A	4.14 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	1.38 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.69 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	62.07 %
Unclassified	root	N/A	4.14 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.69 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.69 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.69 %

Name	Rank	Taxonomy	Distribution
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	46.90 %
Unclassified	root	N/A	4.14 %
Spartobacteria	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria	1.38 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.69 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	0.69 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.69 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	46.21 %
Unclassified	root	N/A	4.14 %
Chthoniobacterales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales	1.38 %
Verrucomicrobia bacterium 13_1_20CM_4_54_11	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium 13_1_20CM_4_54_11	0.69 %
Solibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae	0.69 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.69 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.69 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	46.21 %
Unclassified	root	N/A	4.14 %
Chthoniobacteraceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae	1.38 %
Candidatus Sulfopaludibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter	0.69 %
Verrucomicrobia bacterium 13_1_20CM_4_54_11	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium 13_1_20CM_4_54_11	0.69 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.69 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.69 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	46.21 %
Unclassified	root	N/A	4.14 %
Candidatus Udaeobacter	genus	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter	1.38 %
unclassified Candidatus Sulfopaludibacter	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter	0.69 %
Verrucomicrobia bacterium 13_1_20CM_4_54_11	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium 13_1_20CM_4_54_11	0.69 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.69 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.69 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	46.21 %
Unclassified	root	N/A	4.14 %
Candidatus Udaeobacter	genus	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter	1.38 %
Candidatus Sulfopaludibacter sp. SbA4	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	0.69 %
Verrucomicrobia bacterium 13_1_20CM_4_54_11	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium 13_1_20CM_4_54_11	0.69 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.69 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.69 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459010\|GIO7OMY02HL4HU	All Organisms → cellular organisms → Bacteria	535	Open in IMG/M
2189573001\|GZR05M101A98AN	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	515	Open in IMG/M
3300000956\|JGI10216J12902_121919770	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	505	Open in IMG/M
3300004479\|Ga0062595_100046455	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1948	Open in IMG/M
3300004479\|Ga0062595_101144787	All Organisms → cellular organisms → Bacteria	685	Open in IMG/M
3300005093\|Ga0062594_102321971	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	584	Open in IMG/M
3300005171\|Ga0066677_10594150	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	629	Open in IMG/M
3300005172\|Ga0066683_10296280	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1005	Open in IMG/M
3300005178\|Ga0066688_10320926	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1001	Open in IMG/M
3300005179\|Ga0066684_10797368	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	625	Open in IMG/M
3300005180\|Ga0066685_10277710	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1158	Open in IMG/M
3300005184\|Ga0066671_10171223	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1284	Open in IMG/M
3300005184\|Ga0066671_10652968	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	683	Open in IMG/M
3300005187\|Ga0066675_10292318	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1176	Open in IMG/M
3300005187\|Ga0066675_10299748	All Organisms → cellular organisms → Bacteria	1163	Open in IMG/M
3300005330\|Ga0070690_100120188	All Organisms → cellular organisms → Bacteria	1762	Open in IMG/M
3300005335\|Ga0070666_10777105	All Organisms → cellular organisms → Bacteria	705	Open in IMG/M
3300005355\|Ga0070671_101149199	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	683	Open in IMG/M
3300005434\|Ga0070709_11795476	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	502	Open in IMG/M
3300005435\|Ga0070714_100608658	All Organisms → cellular organisms → Bacteria	1049	Open in IMG/M
3300005435\|Ga0070714_101767021	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	604	Open in IMG/M
3300005439\|Ga0070711_100779400	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	810	Open in IMG/M
3300005454\|Ga0066687_10127044	All Organisms → cellular organisms → Bacteria	1322	Open in IMG/M
3300005540\|Ga0066697_10223379	All Organisms → cellular organisms → Bacteria	1119	Open in IMG/M
3300005559\|Ga0066700_10103700	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1868	Open in IMG/M
3300005560\|Ga0066670_10068069	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1904	Open in IMG/M
3300005566\|Ga0066693_10437241	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	535	Open in IMG/M
3300005568\|Ga0066703_10473548	All Organisms → cellular organisms → Bacteria	748	Open in IMG/M
3300005568\|Ga0066703_10850801	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	521	Open in IMG/M
3300005569\|Ga0066705_10114190	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1621	Open in IMG/M
3300005574\|Ga0066694_10093132	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1404	Open in IMG/M
3300005576\|Ga0066708_10300197	All Organisms → cellular organisms → Bacteria	1028	Open in IMG/M
3300005576\|Ga0066708_10767629	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	607	Open in IMG/M
3300005587\|Ga0066654_10286087	All Organisms → cellular organisms → Bacteria	879	Open in IMG/M
3300005587\|Ga0066654_10523339	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	652	Open in IMG/M
3300005614\|Ga0068856_102096713	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	575	Open in IMG/M
3300006028\|Ga0070717_10131627	All Organisms → cellular organisms → Bacteria	2151	Open in IMG/M
3300006028\|Ga0070717_11045884	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	744	Open in IMG/M
3300006028\|Ga0070717_11183844	Not Available	696	Open in IMG/M
3300006028\|Ga0070717_12005503	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	521	Open in IMG/M
3300006031\|Ga0066651_10069757	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1698	Open in IMG/M
3300006032\|Ga0066696_10292187	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1058	Open in IMG/M
3300006032\|Ga0066696_11051136	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	518	Open in IMG/M
3300006175\|Ga0070712_100355802	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1199	Open in IMG/M
3300006175\|Ga0070712_101094236	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	691	Open in IMG/M
3300006358\|Ga0068871_102164864	All Organisms → cellular organisms → Bacteria	530	Open in IMG/M
3300006797\|Ga0066659_11003138	All Organisms → cellular organisms → Bacteria	698	Open in IMG/M
3300006800\|Ga0066660_11532603	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	526	Open in IMG/M
3300006806\|Ga0079220_10627978	All Organisms → cellular organisms → Bacteria → Proteobacteria	771	Open in IMG/M
3300010321\|Ga0134067_10061901	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1224	Open in IMG/M
3300010322\|Ga0134084_10305986	Not Available	592	Open in IMG/M
3300010325\|Ga0134064_10428798	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	534	Open in IMG/M
3300010326\|Ga0134065_10147274	All Organisms → cellular organisms → Bacteria	819	Open in IMG/M
3300010335\|Ga0134063_10332412	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	735	Open in IMG/M
3300011119\|Ga0105246_11825215	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	582	Open in IMG/M
3300012198\|Ga0137364_10074557	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter	2329	Open in IMG/M
3300012198\|Ga0137364_10169869	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1587	Open in IMG/M
3300012198\|Ga0137364_10343134	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1113	Open in IMG/M
3300012198\|Ga0137364_10660178	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	789	Open in IMG/M
3300012200\|Ga0137382_10128317	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1701	Open in IMG/M
3300012200\|Ga0137382_10162270	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1521	Open in IMG/M
3300012200\|Ga0137382_11112833	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	564	Open in IMG/M
3300012203\|Ga0137399_10070137	All Organisms → cellular organisms → Bacteria	2626	Open in IMG/M
3300012205\|Ga0137362_10091989	All Organisms → cellular organisms → Bacteria	2543	Open in IMG/M
3300012208\|Ga0137376_10765760	All Organisms → cellular organisms → Bacteria	832	Open in IMG/M
3300012210\|Ga0137378_11825753	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	511	Open in IMG/M
3300012285\|Ga0137370_10255020	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter	1040	Open in IMG/M
3300012285\|Ga0137370_10773970	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	596	Open in IMG/M
3300012354\|Ga0137366_10222455	All Organisms → cellular organisms → Bacteria	1405	Open in IMG/M
3300012356\|Ga0137371_10423269	All Organisms → cellular organisms → Bacteria	1032	Open in IMG/M
3300012357\|Ga0137384_11204920	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	602	Open in IMG/M
3300012911\|Ga0157301_10363818	All Organisms → cellular organisms → Bacteria	549	Open in IMG/M
3300012922\|Ga0137394_11085871	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	663	Open in IMG/M
3300012923\|Ga0137359_11349414	Not Available	601	Open in IMG/M
3300012930\|Ga0137407_10339668	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1381	Open in IMG/M
3300012975\|Ga0134110_10331470	All Organisms → cellular organisms → Bacteria	663	Open in IMG/M
3300012977\|Ga0134087_10730084	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	528	Open in IMG/M
3300012984\|Ga0164309_11740207	All Organisms → cellular organisms → Bacteria	535	Open in IMG/M
3300012985\|Ga0164308_11540384	All Organisms → cellular organisms → Bacteria	612	Open in IMG/M
3300012986\|Ga0164304_10328008	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1060	Open in IMG/M
3300012987\|Ga0164307_10404502	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1007	Open in IMG/M
3300012988\|Ga0164306_11534955	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	572	Open in IMG/M
3300013297\|Ga0157378_10810720	All Organisms → cellular organisms → Bacteria	962	Open in IMG/M
3300013308\|Ga0157375_10614172	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1246	Open in IMG/M
3300013308\|Ga0157375_12110644	Not Available	671	Open in IMG/M
3300014150\|Ga0134081_10297621	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	578	Open in IMG/M
3300014150\|Ga0134081_10304073	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	573	Open in IMG/M
3300014166\|Ga0134079_10399873	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	638	Open in IMG/M
3300014969\|Ga0157376_10138870	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	2178	Open in IMG/M
3300015241\|Ga0137418_10118029	All Organisms → cellular organisms → Bacteria	2368	Open in IMG/M
3300015374\|Ga0132255_100484110	All Organisms → cellular organisms → Bacteria	1815	Open in IMG/M
3300018000\|Ga0184604_10004864	All Organisms → cellular organisms → Bacteria	2436	Open in IMG/M
3300018066\|Ga0184617_1021813	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1433	Open in IMG/M
3300018076\|Ga0184609_10059246	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1652	Open in IMG/M
3300018433\|Ga0066667_10072535	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	2184	Open in IMG/M
3300018433\|Ga0066667_12215205	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	512	Open in IMG/M
3300019361\|Ga0173482_10250124	All Organisms → cellular organisms → Bacteria	754	Open in IMG/M
3300019874\|Ga0193744_1086001	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	592	Open in IMG/M
3300019877\|Ga0193722_1009326	All Organisms → cellular organisms → Bacteria	2490	Open in IMG/M
3300019887\|Ga0193729_1035428	All Organisms → cellular organisms → Bacteria	2086	Open in IMG/M
3300019887\|Ga0193729_1040655	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1923	Open in IMG/M
3300019890\|Ga0193728_1242908	All Organisms → cellular organisms → Bacteria	726	Open in IMG/M
3300020002\|Ga0193730_1063555	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1057	Open in IMG/M
3300020004\|Ga0193755_1207475	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	554	Open in IMG/M
3300021178\|Ga0210408_10727626	All Organisms → cellular organisms → Bacteria	780	Open in IMG/M
3300021344\|Ga0193719_10122393	All Organisms → cellular organisms → Bacteria	1130	Open in IMG/M
3300021411\|Ga0193709_1029578	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1319	Open in IMG/M
3300021411\|Ga0193709_1078791	All Organisms → cellular organisms → Bacteria	736	Open in IMG/M
3300021413\|Ga0193750_1005130	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	3447	Open in IMG/M
3300021432\|Ga0210384_10064084	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	3317	Open in IMG/M
3300023058\|Ga0193714_1013621	All Organisms → cellular organisms → Bacteria	1224	Open in IMG/M
3300023058\|Ga0193714_1035659	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	728	Open in IMG/M
3300024288\|Ga0179589_10042255	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium 13_1_20CM_4_54_11	1673	Open in IMG/M
3300025290\|Ga0207673_1016528	All Organisms → cellular organisms → Bacteria	981	Open in IMG/M
3300025898\|Ga0207692_10481699	All Organisms → cellular organisms → Bacteria	785	Open in IMG/M
3300025901\|Ga0207688_10052973	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	2275	Open in IMG/M
3300025905\|Ga0207685_10298404	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	796	Open in IMG/M
3300025915\|Ga0207693_10198426	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1578	Open in IMG/M
3300025915\|Ga0207693_10227894	All Organisms → cellular organisms → Bacteria	1463	Open in IMG/M
3300025923\|Ga0207681_10117505	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1945	Open in IMG/M
3300025925\|Ga0207650_11876536	All Organisms → cellular organisms → Bacteria	506	Open in IMG/M
3300025930\|Ga0207701_10412894	All Organisms → cellular organisms → Bacteria	1162	Open in IMG/M
3300025930\|Ga0207701_10815626	All Organisms → cellular organisms → Bacteria	785	Open in IMG/M
3300025930\|Ga0207701_11543556	Not Available	536	Open in IMG/M
3300025931\|Ga0207644_10926636	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	730	Open in IMG/M
3300025937\|Ga0207669_11921622	Not Available	506	Open in IMG/M
3300025939\|Ga0207665_10621218	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	845	Open in IMG/M
3300025960\|Ga0207651_12126435	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	504	Open in IMG/M
3300026089\|Ga0207648_11221887	All Organisms → cellular organisms → Bacteria	706	Open in IMG/M
3300026300\|Ga0209027_1123153	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	903	Open in IMG/M
3300026310\|Ga0209239_1253206	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	608	Open in IMG/M
3300026310\|Ga0209239_1289720	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	565	Open in IMG/M
3300026326\|Ga0209801_1082127	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1413	Open in IMG/M
3300026330\|Ga0209473_1043567	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1981	Open in IMG/M
3300026330\|Ga0209473_1161474	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	897	Open in IMG/M
3300026330\|Ga0209473_1256651	All Organisms → cellular organisms → Bacteria	598	Open in IMG/M
3300026550\|Ga0209474_10256283	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1073	Open in IMG/M
3300026557\|Ga0179587_10792828	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	625	Open in IMG/M
3300028784\|Ga0307282_10490296	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	597	Open in IMG/M
3300028791\|Ga0307290_10123622	All Organisms → cellular organisms → Bacteria	947	Open in IMG/M
3300028793\|Ga0307299_10242199	All Organisms → cellular organisms → Bacteria	678	Open in IMG/M
3300031231\|Ga0170824_118610045	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1595	Open in IMG/M
3300031720\|Ga0307469_11598644	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	626	Open in IMG/M
3300031754\|Ga0307475_10998878	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	658	Open in IMG/M
3300032205\|Ga0307472_102323590	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	543	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	87.59%
Host-Associated	Host-Associated	12.41%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	85.52%
Plants	Host-Associated → Plants	12.41%
Aquatic	Environmental → Aquatic	2.07%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	85.52%
Rhizosphere	Host-Associated → Plants → Rhizosphere	8.28%
Rhizoplane	Host-Associated → Plants → Rhizoplane	3.45%
Sediment	Environmental → Aquatic → Sediment	2.07%
Roots	Host-Associated → Plants → Roots	0.69%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	73.79%
Loam	Environmental → Terrestrial → Soil → Loam	11.72%
Soil	Host-Associated → Plants → Rhizosphere → Soil	4.83%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	3.45%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.76%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.07%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.69%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.69%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	38.62%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	28.28%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	11.03%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	4.83%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	4.14%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	3.45%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.76%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.76%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.07%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.69%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.69%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.69%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	22.07%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	15.86%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	15.17%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	8.97%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	6.90%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	4.14%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	3.45%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.76%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	2.07%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.07%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	2.07%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.07%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.38%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	1.38%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	1.38%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grass Soil	0.69%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.69%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.69%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.69%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.69%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.69%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.69%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.69%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.69%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.69%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.69%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.69%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459010	Grass soil microbial communities from Rothamsted Park, UK - December 2009 direct MP BIO1O1 lysis 0-9cm (no DNA from 10 to 21cm!!!)	Environmental	Open in IMG/M
2189573001	Grass soil microbial communities from Rothamsted Park, UK - FD2 (NaCl 300g/L 5ml)	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005184	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005335	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG	Host-Associated	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005454	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136	Environmental	Open in IMG/M
3300005540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119	Environmental	Open in IMG/M
3300005566	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_142	Environmental	Open in IMG/M
3300005568	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152	Environmental	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300005574	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143	Environmental	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300005587	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103	Environmental	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300010321	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09212015	Environmental	Open in IMG/M
3300010322	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_0_1 metaG	Environmental	Open in IMG/M
3300010326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012911	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S088-202R-2	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012975	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_11112015	Environmental	Open in IMG/M
3300012977	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014150	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300014166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09182015	Environmental	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300018000	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_coex	Environmental	Open in IMG/M
3300018066	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_b1	Environmental	Open in IMG/M
3300018076	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coex	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300019361	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)	Environmental	Open in IMG/M
3300019874	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1a1	Environmental	Open in IMG/M
3300019877	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2m1	Environmental	Open in IMG/M
3300019887	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c2	Environmental	Open in IMG/M
3300019890	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c1	Environmental	Open in IMG/M
3300020002	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1a1	Environmental	Open in IMG/M
3300020004	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1a2	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021344	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a2	Environmental	Open in IMG/M
3300021411	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H3c2	Environmental	Open in IMG/M
3300021413	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1c1	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300023058	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2m1	Environmental	Open in IMG/M
3300024288	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal	Environmental	Open in IMG/M
3300025290	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with spike-in - S5	Host-Associated	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025901	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)	Host-Associated	Open in IMG/M
3300025905	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025923	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025925	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026300	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026310	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm (SPAdes)	Environmental	Open in IMG/M
3300026326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127 (SPAdes)	Environmental	Open in IMG/M
3300026330	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133 (SPAdes)	Environmental	Open in IMG/M
3300026550	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300028784	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121	Environmental	Open in IMG/M
3300028791	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_144	Environmental	Open in IMG/M
3300028793	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_159	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
F62_08203880	2170459010	Grass Soil	VDAHRDGKRFIVKADDLLTAFLSLERDVIAPKGANGNATRQNVAGVRP
FD2_04037680	2189573001	Grass Soil	XRLGLLFCVDAHRNGKRFIVKADDLLTAFLSLERDAIASKGANGNSTRQNVA
JGI10216J12902_1219197701	3300000956	Soil	GLLFCVDAHRDGKRFIVKADDLLTAFLSLARDVLAAKGANGNAMRQNVA*
Ga0062595_1000464551	3300004479	Soil	LFCVDAHRDGKRFIVKADNLLTVFLSLERDTMAPKEANENATR*
Ga0062595_1011447872	3300004479	Soil	YGIAEHLTKHGLLFCVDAHRDGKRFIVKADDLLTAFLSLERDAIASKGANGSATR*
Ga0062594_1023219712	3300005093	Soil	IDAHRDGKRFIVKADDLLTAFLSLERDAIAPKGANGNATRQNVG*
Ga0066677_105941501	3300005171	Soil	VPPAHRDGKLFIVKADDLLTAFLSLERDAIAAKEANGNATRQNVA*
Ga0066683_102962802	3300005172	Soil	FIVKADDLLTTFLSLERDAIAPKEANGNATRQNIGLGVRP*
Ga0066688_103209262	3300005178	Soil	VYRDGKRFIVKADDLLTAFLSLEKDAIAPKGANGNATRENMSGIL*
Ga0066684_107973682	3300005179	Soil	RDGKRFIVKADDLLTAFLSLERDAIAAKGANGNATRENVG*
Ga0066685_102777102	3300005180	Soil	AHRDGKRFIVKADDLLTAFLSLERDVIAPKGATGNSTHQNVA*
Ga0066671_101712231	3300005184	Soil	RDGKRFIVKADDLLTAFVSLEIDAIALKGANGNATRHKVA*
Ga0066671_106529681	3300005184	Soil	RDGKRFIVKADDLLTAFLSLERDATVAKGANGNSTRQNVG*
Ga0066675_102923182	3300005187	Soil	GLLFCVDAHRDGKRFIVKADDLLTAFLSLERDAIAPKGANGNATRHNIA*
Ga0066675_102997481	3300005187	Soil	LFCVDAHRDGKRFIVKADDLLTAFLSPERDAIAPKGANGNVTRHNIA*
Ga0070690_1001201883	3300005330	Switchgrass Rhizosphere	FCVDAHRDGKRFIVKADDLLTAFLSLERDAIASKGANGSATR*
Ga0070666_107771051	3300005335	Switchgrass Rhizosphere	TKHGLLFCVYAHRHGKRFIVKADDLLTAFLSLERDAIALKGANGNATGQNLV*
Ga0070671_1011491992	3300005355	Switchgrass Rhizosphere	CVDAHRDGKRFIVKADDLLTAFFSLERDPIATKGANGNATRQSVA*
Ga0070709_117954761	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	VDAHRDGKRFIIKADDLLTAFLSLERDAIAPKGANGNGTR*
Ga0070714_1006086582	3300005435	Agricultural Soil	DGKRFIVKADDLLRAFLSLERDVLAPKDANGNATRRSDHTKRSA*
Ga0070714_1017670211	3300005435	Agricultural Soil	HGLLFCVDAHRDGKRFIVKADDLLTAFLSLEKDAIAPKGANGNATRQNVA*
Ga0070711_1007794001	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	HRDGKRFIVKADDLLTAFLSLDRDATAPKDANGNAMRET*
Ga0066687_101270441	3300005454	Soil	DGKRFIVKADDLLTAFLSLEKDVIAAKGANGNATHENVG*
Ga0066697_102233791	3300005540	Soil	MRPVGPAHRDGKRFIVKADDLLTAFLSLERDAIAANGANENATRGNVG*
Ga0066700_101037001	3300005559	Soil	LLFCVDAHRDGKRFIVKADDLLTAFLSLERDAIATKGANGNATRRNLA*
Ga0066670_100680691	3300005560	Soil	RNGKRFIVKADDLLTTFLSLERDAIAPKEANGNATRQNIGLGVRP*
Ga0066693_104372411	3300005566	Soil	KRFIVKADDLLTAFLSLERDAIGTNGANGNATRRNLA*
Ga0066703_104735482	3300005568	Soil	CVDAHRDGKRFIVKADDLLTAFLSLERDVIALKGANRNSKRPNVA*
Ga0066703_108508012	3300005568	Soil	HRDGKRFIVKADDLLTTFLSLERDAIAPKEASGNATRQNIGLGVRP*
Ga0066705_101141903	3300005569	Soil	GKRFIVKADDLLTTFLSLERDAIAPKEANGNATRQNIGLGVRP*
Ga0066694_100931323	3300005574	Soil	RDGKRFIVKADDLLTAFLSLERDAIAPKGANGNATRENVG*
Ga0066708_103001971	3300005576	Soil	RFIVKADDLLTAFLSLERDAIGAKGANGNEMRQNIA*
Ga0066708_107676291	3300005576	Soil	NKHGVLFCVDAHRDGKRFIVKADDLLTAFLSLEIDAIALKGANGNATRHKVA*
Ga0066654_102860871	3300005587	Soil	IVKADDLLTAFLSLERDAIASKDANGNVTRQNVA*
Ga0066654_105233392	3300005587	Soil	GKRFIVKADDLLTAFLSLERDAIATKGANGNATRRNLA*
Ga0068856_1020967132	3300005614	Corn Rhizosphere	KHGLLFCVDAHRDGKRFIVKADDLLTAFLSLERDAIAPKEANENATR*
Ga0070717_101316271	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	FIVKADDLLTAFLSLERDAIVPKDANGNATRQNIASE*
Ga0070717_110458842	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MRTGDGKRFIVKADDLLTVFLSLEKDAIPPKGANATRQNVA*
Ga0070717_111838441	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	KRFIVKADDLLTAFLSLEGDAIAPKEANGNATRRNVV*
Ga0070717_120055032	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	LFVHGFLFCVDAHRDGKRCIVKADDLLTAFLSLERDAIALKGANGNATRQNVA*
Ga0066651_100697571	3300006031	Soil	KRFIVKADDLLTAFLSLERDAIGTNGANGNATRQNLA*
Ga0066696_102921871	3300006032	Soil	FIVKADDLLTAFLSLEKDAMASKGANGNATRHSVG*
Ga0066696_110511361	3300006032	Soil	LLFCVDAHRDGKRFIVKADDLLTAFLSLERDAIGTNGANGNATRQNLA*
Ga0070712_1003558021	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	VHFTKHGLLYCVNAHRDGKRFIVKADNLLTAFLSLERDAIAPK
Ga0070712_1010942362	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	HRDGKRFIVKADDLLTAFLSLERDAIPSKGANGNATHENVA*
Ga0068871_1021648642	3300006358	Miscanthus Rhizosphere	GKRFIVKADDLLTAFLSLERDAIAPKGPNENKTPQNVAS*
Ga0066659_110031381	3300006797	Soil	DGKRFIVKADDLLTAFLSLERDAITPKGANGNATRQNLA*
Ga0066660_115326031	3300006800	Soil	KRFIVKADDLLTAFLSLERDATVAKGANGNSTRQNVG*
Ga0079220_106279781	3300006806	Agricultural Soil	KHGLLFCVDAHRDGKRFIVKVNDLLTAFLSLERDAIAAKSANGNATRR*
Ga0134067_100619011	3300010321	Grasslands Soil	RDGKRFIVKADDLLTAFLSLERDAIATKGADGNATRRNLA*
Ga0134084_103059862	3300010322	Grasslands Soil	FIVKADDLLTAFLSLERDAIAPKGANGNAARQIRD*
Ga0134064_104287981	3300010325	Grasslands Soil	HRDGKRFIVKADDLLTAFLSLERDAIAAKGANGNATRQNVG*
Ga0134065_101472742	3300010326	Grasslands Soil	GLLFCVDAHRDGKRFIVKADDLLTAFLSLERDAIALKGANGKGT*
Ga0134063_103324121	3300010335	Grasslands Soil	LFCVDAHRDGKRFIVKADDLLTAFLSLESDAIATKGTNGSATPQNVA*
Ga0105246_118252152	3300011119	Miscanthus Rhizosphere	WPPLFVHGFLFCVDAHRDGKRCIVKADDLLTAFLSLERDAIALKGANGNATRQNVA*
Ga0137364_100745571	3300012198	Vadose Zone Soil	AEYLTNHGRIFCVDAHRHGKRFIVKADDLLTAFLSLERDAIATKGANGNATRRNLA*
Ga0137364_101698691	3300012198	Vadose Zone Soil	HFTKHGLLFCVDAHRDGKRFIVKADNLLTAFLSLERDAIAPKGANSKGT*
Ga0137364_103431342	3300012198	Vadose Zone Soil	MQKKAPGINAHRDGKRFIVKADDLLTAFLSLEKDAIASKGSNGNATRQNVA*
Ga0137364_106601781	3300012198	Vadose Zone Soil	VDAHRDGKRLIVKADDLLTAFLSLERDAIAIKGANGKSKRQIVA*
Ga0137382_101283173	3300012200	Vadose Zone Soil	LFCVDAHRDGKRFIVKADDLLTVFLSLERDAIASKGANGKGT*
Ga0137382_101622703	3300012200	Vadose Zone Soil	LTKHGLLFCVDAQRDGKRFIVKSDDLLTAFLSLESDAIAAKGANGDATR*
Ga0137382_111128332	3300012200	Vadose Zone Soil	EMAGVGSFDAHKGDGKRYIVHSDELLSAFLSLERDAMTPKGANGNATR*
Ga0137399_100701373	3300012203	Vadose Zone Soil	MKIARRDGKRFIVKADDLLIAFLSLERDAIAPKGANSKGI*
Ga0137362_100919891	3300012205	Vadose Zone Soil	KHGLVFCVDAHRNGKRFIVKADDLLTAFLSLERDAITPKGANGNATPQNAV*
Ga0137376_107657601	3300012208	Vadose Zone Soil	KRFIVKADDLLTAFLSLERDATAPKGANGNATRHNIA*
Ga0137378_118257531	3300012210	Vadose Zone Soil	RFIVKADDLLTAFLSLERDATAAKGANGNPTRQTGA*
Ga0137370_102550201	3300012285	Vadose Zone Soil	RWKRVIVKADDLLTAFLSLERDATAPKGANGNATRHNIA*
Ga0137370_107739702	3300012285	Vadose Zone Soil	MLSKHGFLFCVDAHRDGKRFIVKADDLLTAFLSLERDASEPKGTNGNATRQNVA*
Ga0137366_102224553	3300012354	Vadose Zone Soil	DGKRFIVKADDLLTAFLSLERDAIAPKGANGNATRVNVG*
Ga0137371_104232691	3300012356	Vadose Zone Soil	LLFCVDAHRDGKRFIIKADDLLTAFLSLERDAIAPKGANGNATRQNVG*
Ga0137384_112049203	3300012357	Vadose Zone Soil	FIVKADDLLTAFLSLERDSIASKGANGNATCQSVA*
Ga0157301_103638181	3300012911	Soil	HFTKHGLLFCVDAHRDGKRFIVKADDLLTAFLSLERDAIRSRDANRNATR*
Ga0137394_110858712	3300012922	Vadose Zone Soil	TKQGLLFCVDAHRDGKRFIVKADDLLTAFLSLERDAITPKDANGN*
Ga0137359_113494141	3300012923	Vadose Zone Soil	RFIVKADNLWRAFLSLERDVMVPKGANENATGQNVA*
Ga0137407_103396681	3300012930	Vadose Zone Soil	QGLLFCVDAHRDGKRFIVKADELLTAFLSLERDAISPKGANGNATR*
Ga0134110_103314702	3300012975	Grasslands Soil	ADAHRPGKRFIVEADDLLTAFLSRERDAIVTKGTDGNATRESVA*
Ga0134087_107300841	3300012977	Grasslands Soil	KHGFLFCVDAHRDGKRFIVKADDLLTAFVSLEIDAIALKGANGNATRHKVA*
Ga0164309_117402072	3300012984	Soil	DAQRDGKRFIVKADDLLTAFLSLENDAIAPKEANGNAPRQNGA*
Ga0164308_115403841	3300012985	Soil	AEHLTKHGLLFCVDAHRDGKRFIVKADDLLTAFLSLERDAITPKDANGN*
Ga0164304_103280082	3300012986	Soil	EHFTQHGFLYCVDARRDGERFIVKADDLLTAFLSLERDAIASNGANGNATRQNVA*
Ga0164307_104045021	3300012987	Soil	AHALKIRKHGLLFCVDAHRDGKRFIVKADDLLTAFLSLERDTIASKEANGNATRRNVA*
Ga0164306_115349551	3300012988	Soil	IVKADDLLTAFLSLERDVIATKSANGTATYENLA*
Ga0157378_108107201	3300013297	Miscanthus Rhizosphere	GKRFIVKADDLLTAFLSLERDTIAPKGANGNETRLNAS*
Ga0157375_106141722	3300013308	Miscanthus Rhizosphere	MRTGDGKRFIVKADDLLTVFLSLEKNAIPPKGANGNATRQNVA*
Ga0157375_121106441	3300013308	Miscanthus Rhizosphere	RFIVKADDLLTAFLSLERDAIALKGANGNATGQNLV*
Ga0134081_102976212	3300014150	Grasslands Soil	NKHGLLFCVDAQRDGKRFIVKADDLLTAFLSLERDAIATKGANGNATRRNLA*
Ga0134081_103040732	3300014150	Grasslands Soil	LFCVDAHRDGKRFIVKADDLLTAFLSLERDAIAPKGANGNATRKNVG*
Ga0134079_103998732	3300014166	Grasslands Soil	GFLFCVDAHRHGKRFIVEADDLLTAFLSRERDAKAAKGANGNATRQNVV*
Ga0157376_101388705	3300014969	Miscanthus Rhizosphere	FLFCVDAHRDGKRFIAKADDLLTAFLSLERDVTELKGANGNATRQNVG*
Ga0137418_101180294	3300015241	Vadose Zone Soil	MKIARRDGKRFIVKADDLLTAFLSLERDAIAPKGANSKGI*
Ga0132255_1004841103	3300015374	Arabidopsis Rhizosphere	GIAEHLTKHGLLFCVDAHRDGKRFIVKADDLLTAFLSPERNARAPKGANGNGTRQNIA*
Ga0184604_100048641	3300018000	Groundwater Sediment	MQHRDRKRFIVKADDLLTAFLSLEKDAIAAKGANGNPTRQNLA
Ga0184617_10218133	3300018066	Groundwater Sediment	EHFTKHGFVYCVDAHRDGKRYIVKADDLLAAFLSLERDAIALKGANGNATRQNVA
Ga0184609_100592461	3300018076	Groundwater Sediment	NLARVDAHRDGKRFIVKVDDLLTAFLSLERDPIRSKGANGNATRKVG
Ga0066667_100725351	3300018433	Grasslands Soil	AHRDGKRFIVKADDLLTAFLSLERDAIATKGANGNATRRNLA
Ga0066667_122152051	3300018433	Grasslands Soil	GLLFCVDAHRDGKRFIVKADELLTAFLSLERKAIAPKGANGNATR
Ga0173482_102501242	3300019361	Soil	AHRDGKRFIVKSDDLLTAFLSLERDATAAKGVNGNATPHSVA
Ga0193744_10860011	3300019874	Soil	NGLLFRVDAHRDGKRFIVKADDLLTAFLSLERDVITPKGANGNATRHNVA
Ga0193722_10093261	3300019877	Soil	GIAEHFTKHGLLFCVDAHRDGKRFIVKADDLLTAFLSLERDAIAPKSANENKTRPNLP
Ga0193729_10354283	3300019887	Soil	FIVKADDLLTAFLSLERDAIAPKGANGNKTRPNFL
Ga0193729_10406554	3300019887	Soil	MPHRDGKRFIVKADDLLTAYLSLERDAMAPGGANGNAT
Ga0193728_12429082	3300019890	Soil	KSFIVKADDLLTAFLSLERDAIAPKGANGNTTQQYVAQGVHR
Ga0193730_10635551	3300020002	Soil	DAHRDGKRFIVKADDLLEAFLSLERDLIAPKGANGNATR
Ga0193755_12074752	3300020004	Soil	LTKHGLLYCVDAHRDGKRFIVKADDLLTAFLSLERDAMAPKGANENKTRPNFL
Ga0210408_107276261	3300021178	Soil	LLFCFDAHRDGKRFIVKADDLLTAFLSLERNAIRSKGANGNAARQNVA
Ga0193719_101223932	3300021344	Soil	FIVKADDLLTTFLSLERDAIAPKEANGNATRQNIA
Ga0193709_10295782	3300021411	Soil	LLYCVDAHRDGKRFIVKADDLLTAFLSLERDAMAPKGANENKTRPNFL
Ga0193709_10787912	3300021411	Soil	RDGKRLIVKADDLLAAFLSLERDAIAPKGANGNTTQQYVAQGVQR
Ga0193750_10051303	3300021413	Soil	FCVDAHRDGKRFIVKADDLLTAFLSLERDVITPKGANGNATRHNVA
Ga0210384_100640842	3300021432	Soil	LTKHGLLFCVDVHRDGKRFIVKANDLLTAFLSLERDAIAAKGANEKKS
Ga0193714_10136212	3300023058	Soil	VDAHRDGKRFIVKADDLLTAFLSLERDAIATKGANGNGTR
Ga0193714_10356591	3300023058	Soil	YCVDAHRDGKRFIVKADDLLTTFLSLERDAVAPKESNGNGTRPNVA
Ga0179589_100422551	3300024288	Vadose Zone Soil	RLHAGGWSYGIAEHRDGKRFIDKADDLFLSPERGAITPKDANGNATRPNVA
Ga0207673_10165281	3300025290	Corn, Switchgrass And Miscanthus Rhizosphere	KRFIVKADDLLTAFLELESNAIVPKGTNENATGQNVA
Ga0207692_104816992	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	VDAHRDGKRFIVKADDLLTAFLSLERDLIAPKGANGNATLRILA
Ga0207688_100529735	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	RDGKRFIAKADDLLTAFLSLERDVTELKGANGNATRQNVG
Ga0207685_102984042	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	TRHGLLYCVDAHRDGKRFIVKADDLLTAFLSLERDAIAPKSANRNATPQNIA
Ga0207693_101984261	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	DAHRDEKRFIVKADNLLTAFLSLERDATAPKGANGNATC
Ga0207693_102278943	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	EVQQGLLFCVDAHRDGKRFIVKADDLLTAFLSLERDVIAPNGANGNARRPNAAWE
Ga0207681_101175051	3300025923	Switchgrass Rhizosphere	KRFIVKADDLLTAFLSLERDAIVPKGANENATGQNVA
Ga0207650_118765362	3300025925	Switchgrass Rhizosphere	AEHFTQHGFLFCVDAHRDGKRFIAKADDLLTAFLSLERDVTELKGANGNATRQNVA
Ga0207701_104128941	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	TRHGKRFIVKADDLLTAFLSLEKDAIAIKGANGNATGQNIA
Ga0207701_108156261	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	LLFCVDAHRDGKRFIVKADDLLTAFLSLERDLIAPKGANGNATLRILA
Ga0207701_115435561	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	GKRFIVKADYLLTAFLSLERDAIAAKGANGNSTRQNVG
Ga0207644_109266362	3300025931	Switchgrass Rhizosphere	AEHLTKHGLLFCVDAHRDGKRFIVKADDLLTAFLSLERDAIASKGANGSATR
Ga0207669_119216221	3300025937	Miscanthus Rhizosphere	IVKADDLLTAFLSLERDAIAPKGANGNATRPKRRLGVKPINRERLI
Ga0207665_106212181	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	HRDGKRFIVKADDLLTAFLSLERDAIASKGANGNATRQNVA
Ga0207651_121264351	3300025960	Switchgrass Rhizosphere	KHGFLFCVDAHRDGKRFIVKADDLLTAFLSPEKDAIAPKEANENATR
Ga0207648_112218872	3300026089	Miscanthus Rhizosphere	LFCVYAYRHGKRFIVKADDLLTAFLSLERDAIALKGANGNATGQNLV
Ga0209027_11231531	3300026300	Grasslands Soil	LTKHGLLFCVDAQRDGKRFIVKADDLLTAFLSLERDAIATEGANGNATRRNLA
Ga0209239_12532062	3300026310	Grasslands Soil	MQKKAPGINAHRDGKRFIVKADDLLTAFLSLEKDAIASKGSNGNATRQNVA
Ga0209239_12897201	3300026310	Grasslands Soil	CVDAHRGGKRFIVKAEELLTAFLLLERDAIAPKGANDNATRHNVG
Ga0209801_10821271	3300026326	Soil	KPRRDGKRFIVKADDLLTTFLSLERDAIAPKEANGNATRQNIGLGVRP
Ga0209473_10435674	3300026330	Soil	WKRFIVKADDLLTTFLSLERDAIAPKEANGNATRQNIGLGVRP
Ga0209473_11614741	3300026330	Soil	DAHRDGKRFIVKADDLLTAFLSLERDAIAPKGANGNAARQIRD
Ga0209473_12566512	3300026330	Soil	DGKRFIVKTDDLLTAFLSLERDVTELKGANGDARRQNVA
Ga0209474_102562832	3300026550	Soil	CVDAQRDGKRFIVKADDLLTAFLSLEKDAMASKGANGNATRHSVG
Ga0179587_107928281	3300026557	Vadose Zone Soil	HGLLFCVDAHRDGKRFIVKADDLLTAFLSLERDAIASKDANGNATGQNVA
Ga0307282_104902961	3300028784	Soil	VLPNENKADDLLTAFLELERDATAPKGTNGNATRQNIA
Ga0307290_101236222	3300028791	Soil	NLARVELNRDGKRFIVKADDLLKAFLSLERDAIRSKDANGNAARHKVG
Ga0307299_102421992	3300028793	Soil	LNLARVELNRDGKRFIVKADDLLKAFLSLERDAIRSKDANGNAARHKVG
Ga0170824_1186100451	3300031231	Forest Soil	VLVKVDDLLIAFLSLERDAIAAKEANGNSTPRTSPR
Ga0307469_115986442	3300031720	Hardwood Forest Soil	MPHGVGKRFIVKADDLLTAFLSLERDAMAPKQANGTATRLN
Ga0307475_109988781	3300031754	Hardwood Forest Soil	HGLLFCFDAHRDGKRFIVKADDLLTAFLSLERNAIGSKGANGNATRQNVA
Ga0307472_1023235902	3300032205	Hardwood Forest Soil	HGFLYCVDAHRDGKRFIVKADDLLTAFLSLEKDVIAPKGANGKGT

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F050555

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences