Metagenome / Metatranscriptome Family F050558

Basic Information
Family ID	F050558
Family Type	Metagenome / Metatranscriptome
Number of Sequences	145
Average Sequence Length	49 residues
Representative Sequence	DLRDSEAVGKARDAAKDAIKDLREGEAGRKAKEALRDLRDGASGRSKS
Number of Associated Samples	132
Number of Associated Scaffolds	145

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	96.55 %
% of genes from short scaffolds (< 2000 bps)	92.41 %
Associated GOLD sequencing projects	125
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.42

Most Common Taxonomy
Group	Bacteria (68.966 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (22.759 % of family members)
Environment Ontology (ENVO)	Unclassified (22.759 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (45.517 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Mixed	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 50.00% β-sheet: 0.00% Coil/Unstructured: 50.00%
Feature Viewer

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Pfam ID	Name	% Frequency in 145 Family Scaffolds
PF00356	LacI	56.55
PF13377	Peripla_BP_3	13.79
PF00532	Peripla_BP_1	11.03
PF02782	FGGY_C	1.38
PF02610	Arabinose_Isome	0.69
PF00596	Aldolase_II	0.69

COG ID	Name	Functional Category	% Frequency in 145 Family Scaffolds
COG2160	L-arabinose isomerase	Carbohydrate transport and metabolism [G]	0.69

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	68.97 %
Unclassified	root	N/A	31.03 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	68.97 %
Unclassified	root	N/A	31.03 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	68.97 %
Unclassified	root	N/A	31.03 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	31.03 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	30.34 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	31.03 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	30.34 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	31.03 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	24.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	31.03 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	4.14 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	31.03 %
Micrococcaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae	2.76 %
Microbacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae	1.38 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	31.03 %
Micrococcaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae	2.76 %
Curtobacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Curtobacterium	0.69 %
Clavibacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Clavibacter	0.69 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	31.03 %
Micrococcaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae	2.76 %
Clavibacter michiganensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Clavibacter → Clavibacter michiganensis	0.69 %
Curtobacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Curtobacterium	0.69 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	31.03 %
Micrococcaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae	2.76 %
Clavibacter michiganensis subsp. michiganensis	subspecies	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Clavibacter → Clavibacter michiganensis → Clavibacter michiganensis subsp. michiganensis	0.69 %
Curtobacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Curtobacterium	0.69 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.69 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001431\|F14TB_101676422	Not Available	504	Open in IMG/M
3300004091\|Ga0062387_101580623	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae	529	Open in IMG/M
3300004092\|Ga0062389_104336898	Not Available	534	Open in IMG/M
3300004295\|Ga0068932_1343103	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	705	Open in IMG/M
3300004601\|Ga0068934_1269341	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	974	Open in IMG/M
3300004610\|Ga0068927_1337772	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae	639	Open in IMG/M
3300005176\|Ga0066679_10062622	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2178	Open in IMG/M
3300005177\|Ga0066690_10536000	All Organisms → cellular organisms → Bacteria	785	Open in IMG/M
3300005332\|Ga0066388_107757640	Not Available	537	Open in IMG/M
3300005334\|Ga0068869_100294035	Not Available	1309	Open in IMG/M
3300005337\|Ga0070682_101875324	Not Available	524	Open in IMG/M
3300005435\|Ga0070714_102004711	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	564	Open in IMG/M
3300005439\|Ga0070711_100872936	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	766	Open in IMG/M
3300005456\|Ga0070678_100189382	Not Available	1690	Open in IMG/M
3300005458\|Ga0070681_10369642	Not Available	1344	Open in IMG/M
3300005467\|Ga0070706_101547016	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	606	Open in IMG/M
3300005543\|Ga0070672_101630469	Not Available	579	Open in IMG/M
3300005843\|Ga0068860_100533189	All Organisms → cellular organisms → Bacteria	1175	Open in IMG/M
3300005844\|Ga0068862_100583989	All Organisms → cellular organisms → Bacteria	1071	Open in IMG/M
3300005921\|Ga0070766_10464718	All Organisms → cellular organisms → Bacteria	837	Open in IMG/M
3300006175\|Ga0070712_100209217	Not Available	1537	Open in IMG/M
3300006572\|Ga0074051_11529596	Not Available	513	Open in IMG/M
3300006577\|Ga0074050_11757796	Not Available	553	Open in IMG/M
3300006755\|Ga0079222_10148150	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1329	Open in IMG/M
3300006914\|Ga0075436_101209099	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	570	Open in IMG/M
3300009098\|Ga0105245_12547738	Not Available	565	Open in IMG/M
3300009137\|Ga0066709_100498408	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Curtobacterium	1715	Open in IMG/M
3300009683\|Ga0116224_10370508	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	681	Open in IMG/M
3300009824\|Ga0116219_10554463	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	633	Open in IMG/M
3300009839\|Ga0116223_10356740	All Organisms → cellular organisms → Bacteria	865	Open in IMG/M
3300010043\|Ga0126380_10661029	All Organisms → cellular organisms → Bacteria	834	Open in IMG/M
3300010047\|Ga0126382_10502638	All Organisms → cellular organisms → Bacteria	975	Open in IMG/M
3300010159\|Ga0099796_10331044	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	652	Open in IMG/M
3300010341\|Ga0074045_10132598	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1703	Open in IMG/M
3300010341\|Ga0074045_10412000	Not Available	875	Open in IMG/M
3300010361\|Ga0126378_11641622	Not Available	730	Open in IMG/M
3300010371\|Ga0134125_11041536	All Organisms → cellular organisms → Bacteria	897	Open in IMG/M
3300010371\|Ga0134125_12486600	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae	563	Open in IMG/M
3300010379\|Ga0136449_103468309	Not Available	601	Open in IMG/M
3300010379\|Ga0136449_104366648	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	522	Open in IMG/M
3300010403\|Ga0134123_10453787	All Organisms → cellular organisms → Bacteria	1192	Open in IMG/M
3300010865\|Ga0126346_1336537	All Organisms → cellular organisms → Bacteria	723	Open in IMG/M
3300010868\|Ga0124844_1035799	Not Available	1633	Open in IMG/M
3300010868\|Ga0124844_1037481	Not Available	1610	Open in IMG/M
3300010868\|Ga0124844_1038956	Not Available	1591	Open in IMG/M
3300011120\|Ga0150983_10450352	Not Available	1190	Open in IMG/M
3300012199\|Ga0137383_10910505	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	642	Open in IMG/M
3300012201\|Ga0137365_10525984	All Organisms → cellular organisms → Bacteria	869	Open in IMG/M
3300012208\|Ga0137376_10437476	All Organisms → cellular organisms → Bacteria	1136	Open in IMG/M
3300012209\|Ga0137379_11554570	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	561	Open in IMG/M
3300012210\|Ga0137378_10970013	All Organisms → cellular organisms → Bacteria	764	Open in IMG/M
3300012210\|Ga0137378_11823090	Not Available	512	Open in IMG/M
3300012211\|Ga0137377_10506290	All Organisms → cellular organisms → Bacteria	1146	Open in IMG/M
3300012350\|Ga0137372_10664314	All Organisms → cellular organisms → Bacteria	758	Open in IMG/M
3300012357\|Ga0137384_10936494	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	697	Open in IMG/M
3300012363\|Ga0137390_10572825	All Organisms → cellular organisms → Bacteria	1098	Open in IMG/M
3300012491\|Ga0157329_1034581	Not Available	541	Open in IMG/M
3300012505\|Ga0157339_1026479	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	652	Open in IMG/M
3300012929\|Ga0137404_10167847	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1839	Open in IMG/M
3300012957\|Ga0164303_11000792	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	595	Open in IMG/M
3300012958\|Ga0164299_10293493	All Organisms → cellular organisms → Bacteria	995	Open in IMG/M
3300012987\|Ga0164307_10738785	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	776	Open in IMG/M
3300013104\|Ga0157370_11573070	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae	591	Open in IMG/M
3300013297\|Ga0157378_11226546	All Organisms → cellular organisms → Bacteria	790	Open in IMG/M
3300015372\|Ga0132256_102773772	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	589	Open in IMG/M
3300016319\|Ga0182033_10795294	All Organisms → cellular organisms → Bacteria	833	Open in IMG/M
3300016445\|Ga0182038_11636153	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	579	Open in IMG/M
3300018431\|Ga0066655_10468111	All Organisms → cellular organisms → Bacteria	833	Open in IMG/M
3300019890\|Ga0193728_1201669	All Organisms → cellular organisms → Bacteria	835	Open in IMG/M
3300020581\|Ga0210399_10450160	All Organisms → cellular organisms → Bacteria	1072	Open in IMG/M
3300020582\|Ga0210395_10860879	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	674	Open in IMG/M
3300021088\|Ga0210404_10384657	All Organisms → cellular organisms → Bacteria	783	Open in IMG/M
3300021377\|Ga0213874_10042312	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1368	Open in IMG/M
3300021404\|Ga0210389_11547595	Not Available	503	Open in IMG/M
3300021420\|Ga0210394_10695571	All Organisms → cellular organisms → Bacteria	891	Open in IMG/M
3300021445\|Ga0182009_10372884	All Organisms → cellular organisms → Bacteria	733	Open in IMG/M
3300021478\|Ga0210402_10166503	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2015	Open in IMG/M
3300021479\|Ga0210410_10215953	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1719	Open in IMG/M
3300021560\|Ga0126371_11528337	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	795	Open in IMG/M
3300024283\|Ga0247670_1072762	Not Available	627	Open in IMG/M
3300025527\|Ga0208714_1014901	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1958	Open in IMG/M
3300025898\|Ga0207692_10382861	All Organisms → cellular organisms → Bacteria	874	Open in IMG/M
3300025900\|Ga0207710_10180826	All Organisms → cellular organisms → Bacteria	1035	Open in IMG/M
3300025903\|Ga0207680_10433994	All Organisms → cellular organisms → Bacteria	931	Open in IMG/M
3300025910\|Ga0207684_10073036	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Clavibacter → Clavibacter michiganensis → Clavibacter michiganensis subsp. michiganensis	2913	Open in IMG/M
3300025910\|Ga0207684_11483743	Not Available	552	Open in IMG/M
3300025917\|Ga0207660_11389074	Not Available	569	Open in IMG/M
3300025918\|Ga0207662_10307016	All Organisms → cellular organisms → Bacteria	1056	Open in IMG/M
3300025929\|Ga0207664_11149447	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	693	Open in IMG/M
3300025933\|Ga0207706_10022834	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	5613	Open in IMG/M
3300025972\|Ga0207668_11976522	Not Available	525	Open in IMG/M
3300026277\|Ga0209350_1119117	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	601	Open in IMG/M
3300026490\|Ga0257153_1070396	All Organisms → cellular organisms → Bacteria	706	Open in IMG/M
3300026551\|Ga0209648_10839250	Not Available	502	Open in IMG/M
3300027725\|Ga0209178_1117137	All Organisms → cellular organisms → Bacteria	900	Open in IMG/M
3300027884\|Ga0209275_10075288	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1680	Open in IMG/M
3300028380\|Ga0268265_10787067	All Organisms → cellular organisms → Bacteria	926	Open in IMG/M
3300028791\|Ga0307290_10163272	All Organisms → cellular organisms → Bacteria	816	Open in IMG/M
3300028811\|Ga0307292_10156593	All Organisms → cellular organisms → Bacteria	922	Open in IMG/M
3300029636\|Ga0222749_10384734	All Organisms → cellular organisms → Bacteria	741	Open in IMG/M
3300030743\|Ga0265461_10914191	All Organisms → cellular organisms → Bacteria	849	Open in IMG/M
3300031446\|Ga0170820_15311544	Not Available	614	Open in IMG/M
3300031544\|Ga0318534_10464629	All Organisms → cellular organisms → Bacteria	724	Open in IMG/M
3300031544\|Ga0318534_10718239	Not Available	564	Open in IMG/M
3300031545\|Ga0318541_10501055	All Organisms → cellular organisms → Bacteria	679	Open in IMG/M
3300031546\|Ga0318538_10466996	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	684	Open in IMG/M
3300031708\|Ga0310686_108488423	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	696	Open in IMG/M
3300031718\|Ga0307474_11519070	Not Available	527	Open in IMG/M
3300031723\|Ga0318493_10810677	Not Available	528	Open in IMG/M
3300031744\|Ga0306918_10376591	All Organisms → cellular organisms → Bacteria	1104	Open in IMG/M
3300031748\|Ga0318492_10182484	Not Available	1068	Open in IMG/M
3300031765\|Ga0318554_10494185	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	692	Open in IMG/M
3300031769\|Ga0318526_10465515	Not Available	516	Open in IMG/M
3300031792\|Ga0318529_10089712	Not Available	1377	Open in IMG/M
3300031797\|Ga0318550_10318390	All Organisms → cellular organisms → Bacteria	754	Open in IMG/M
3300031819\|Ga0318568_10962775	Not Available	527	Open in IMG/M
3300031846\|Ga0318512_10220543	All Organisms → cellular organisms → Bacteria	931	Open in IMG/M
3300031890\|Ga0306925_10794677	All Organisms → cellular organisms → Bacteria	982	Open in IMG/M
3300031893\|Ga0318536_10599304	Not Available	551	Open in IMG/M
3300031896\|Ga0318551_10308942	All Organisms → cellular organisms → Bacteria	890	Open in IMG/M
3300031896\|Ga0318551_10501023	All Organisms → cellular organisms → Bacteria	696	Open in IMG/M
3300031897\|Ga0318520_10319392	All Organisms → cellular organisms → Bacteria	938	Open in IMG/M
3300031910\|Ga0306923_10226199	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2140	Open in IMG/M
3300031947\|Ga0310909_10523740	All Organisms → cellular organisms → Bacteria	993	Open in IMG/M
3300032010\|Ga0318569_10621093	Not Available	503	Open in IMG/M
3300032013\|Ga0310906_10215451	All Organisms → cellular organisms → Bacteria	1175	Open in IMG/M
3300032025\|Ga0318507_10217322	All Organisms → cellular organisms → Bacteria	826	Open in IMG/M
3300032044\|Ga0318558_10238854	All Organisms → cellular organisms → Bacteria	892	Open in IMG/M
3300032065\|Ga0318513_10644816	Not Available	519	Open in IMG/M
3300032076\|Ga0306924_11193796	All Organisms → cellular organisms → Bacteria	824	Open in IMG/M
3300032160\|Ga0311301_11865557	All Organisms → cellular organisms → Bacteria	711	Open in IMG/M
3300032180\|Ga0307471_100262418	Not Available	1789	Open in IMG/M
3300032205\|Ga0307472_100706325	All Organisms → cellular organisms → Bacteria	907	Open in IMG/M
3300032205\|Ga0307472_101588470	Not Available	642	Open in IMG/M
3300032261\|Ga0306920_101517305	All Organisms → cellular organisms → Bacteria	956	Open in IMG/M
3300032770\|Ga0335085_11322342	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	759	Open in IMG/M
3300032805\|Ga0335078_11516602	All Organisms → cellular organisms → Bacteria	748	Open in IMG/M
3300032954\|Ga0335083_10109324	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2700	Open in IMG/M
3300032954\|Ga0335083_10579299	All Organisms → cellular organisms → Bacteria	927	Open in IMG/M
3300033158\|Ga0335077_10821470	All Organisms → cellular organisms → Bacteria	944	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	87.59%
Host-Associated	Host-Associated	12.41%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	86.21%
Plants	Host-Associated → Plants	12.41%
Aquatic	Environmental → Aquatic	1.38%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	84.83%
Rhizosphere	Host-Associated → Plants → Rhizosphere	6.90%
Rhizoplane	Host-Associated → Plants → Rhizoplane	4.83%
Freshwater	Environmental → Aquatic → Freshwater	1.38%
Peat	Environmental → Terrestrial → Peat	1.38%
Roots	Host-Associated → Plants → Roots	0.69%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	65.52%
Loam	Environmental → Terrestrial → Soil → Loam	13.79%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	5.52%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	4.14%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	3.45%
Soil	Host-Associated → Plants → Rhizosphere → Soil	3.45%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	1.38%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	1.38%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.69%
Unclassified	Host-Associated → Plants → Roots → Unclassified	0.69%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	31.03%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	27.59%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	8.28%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	5.52%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	4.83%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	4.14%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	4.14%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	3.45%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	3.45%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	1.38%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.38%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	1.38%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.69%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.69%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.69%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.69%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	0.69%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	22.76%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	8.28%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	6.21%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	5.52%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	4.83%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.14%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	3.45%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	2.76%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.76%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.76%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.07%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.07%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	2.07%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.07%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.38%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.38%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.38%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	1.38%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	1.38%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	1.38%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	1.38%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	1.38%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.38%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	0.69%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.69%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.69%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.69%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.69%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.69%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.69%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.69%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.69%
Plant Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Plant Roots	0.69%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.69%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.69%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.69%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.69%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.69%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.69%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.69%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.69%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	0.69%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001431	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.4TB clc assemly	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004295	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 18 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004601	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 22 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004610	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 12 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005543	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG	Host-Associated	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006572	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHPB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006577	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHPA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009683	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_b_LC metaG	Environmental	Open in IMG/M
3300009824	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaG	Environmental	Open in IMG/M
3300009839	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010159	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3	Environmental	Open in IMG/M
3300010341	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300010865	Boreal forest soil eukaryotic communities from Alaska, USA - C3-3 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300010868	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (PacBio error correction)	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012491	Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.8.old.040610	Host-Associated	Open in IMG/M
3300012505	Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.10.yng.090610	Host-Associated	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300013104	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG	Host-Associated	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300018058	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MG	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300019890	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c1	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021377	Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7	Host-Associated	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021445	Bulk soil microbial communities from the field in Mead, Nebraska, USA - 072115-187_1 MetaG	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300024283	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK11	Environmental	Open in IMG/M
3300025527	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-1 shallow-072012 (SPAdes)	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025900	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025903	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025918	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026277	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_2_20cm (SPAdes)	Environmental	Open in IMG/M
3300026490	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-10-A	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300027725	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200 (SPAdes)	Environmental	Open in IMG/M
3300027884	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)	Environmental	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028791	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_144	Environmental	Open in IMG/M
3300028811	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_149	Environmental	Open in IMG/M
3300028877	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N3_3	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030739	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N1_3	Environmental	Open in IMG/M
3300030743	Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada VCO Co-assembly	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031769	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f24	Environmental	Open in IMG/M
3300031792	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f23	Environmental	Open in IMG/M
3300031797	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300032010	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f22	Environmental	Open in IMG/M
3300032013	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3	Environmental	Open in IMG/M
3300032025	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f20	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032065	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032954	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.2	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
F14TB_1016764221	3300001431	Soil	VGKARDAAKDAIKDLREGEAGRKAKEALRDLRGSASGRSKS*
Ga0062387_1015806231	3300004091	Bog Forest Soil	IGKARDAARDVLRDLREGEAGRKAKSAPRDLRDSTTSRDKP*
Ga0062389_1043368981	3300004092	Bog Forest Soil	DSEAVGKARDAARDVLRDLREGEAGRKAKAAIRDLRDSTASRDKP*
Ga0068932_13431032	3300004295	Peatlands Soil	AKAAIRDLRDSEAVGKARDAARDVLRDLREGEAGRKAKAAIRDLRDSTASRDKP*
Ga0068934_12693411	3300004601	Peatlands Soil	KARDAARDVLRDLREGEAGRKAKAAIRDLRDSTASRDKP*
Ga0068927_13377721	3300004610	Peatlands Soil	RKAKAAIRDLRDSEAVGKARDAARDVLRDLREGEAGRKAKAAIRDLRDSTASRDKP*
Ga0066679_100626221	3300005176	Soil	DSEAVGKARDAAKDVLKDLREGDAGRKAKEALRDLRDGAGRGKS*
Ga0066690_105360001	3300005177	Soil	VGKARDAAKDVLKDLREGDAGRKAKEALRDLRDGAGRGKS*
Ga0066388_1077576401	3300005332	Tropical Forest Soil	RDLRDSEAVGKARDAARDMVRDLREGDAGRKAREAIRDLRDSASSRGKSQP*
Ga0068869_1002940351	3300005334	Miscanthus Rhizosphere	KARDAAKDAFKDLREGEAGRKAREALRDLRDGASGRSKS*
Ga0070682_1018753242	3300005337	Corn Rhizosphere	AIKDLRDSEAVGKARDAAKDAFKDLREGEAGRKAREALRDLRDGASGRSKS*
Ga0070714_1020047111	3300005435	Agricultural Soil	KDLRDSEAVGKARAAAKDVMRDLREGDAGRKAREAVKDLRDSAAGRGKS*
Ga0070711_1008729361	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	EGDAGRKAKEAIKDLRDSEAVGKARDAAKDVLKDLREGDAGRKAKEALRDLRDGAGRGKS
Ga0070678_1001893821	3300005456	Miscanthus Rhizosphere	DASRKAKEAIKDLRDSEAVGKARDAAKDAFKDLREGEAGRKAREALRDLRDGASGRSKS*
Ga0070681_103696421	3300005458	Corn Rhizosphere	DSEAVGKARDAAKDAFKDLREGEAGRKAKEALRDLRDGASGRSKS*
Ga0070706_1015470161	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	KAKEAIKDLRDSEAVGKARDAAKDVLKDLREGEAGRKAKEALRDLRDGAGRGKS*
Ga0070672_1016304691	3300005543	Miscanthus Rhizosphere	DSEAVGKARDAAKDAFKDLREGEAGRKAREALRDLRDGASGRSKS*
Ga0068860_1005331893	3300005843	Switchgrass Rhizosphere	RDSEAVAKARDAAKDAFKDLREGEAGRKAKEALRDLRDGASGRSKS*
Ga0068862_1005839892	3300005844	Switchgrass Rhizosphere	EAIKDLRDSEAVAKARDAAKDAFKDLREGEAGRKAREALRDLRDGASGRSKS*
Ga0070766_104647182	3300005921	Soil	EAALRDLRDSEAVGKARDAARDALRDLREGEAGRKAKAAIRDLRDSTASRDKP*
Ga0070712_1002092171	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	ARDAAKDVLKDLREGDAGRKAKEALRDLRDGAGRGKS*
Ga0074051_115295963	3300006572	Soil	AKDAIKDLREGEAGRKAKEALRDLRDGASGRSKS*
Ga0074050_117577961	3300006577	Soil	RKAKDAIKDLRDSEAVGKARDAAKDAIKDLREGEAGRKAKEALRDLRDGASGRSKS*
Ga0079222_101481501	3300006755	Agricultural Soil	LRDSEAVGKARDAAKDVLKDLREGDAGRKAKEALRDLRDGAGRGKS*
Ga0075436_1012090992	3300006914	Populus Rhizosphere	SEAVGKARDAAKDAFKDLREGEAGRKAKEALRDLRGSASGRSKS*
Ga0105245_125477381	3300009098	Miscanthus Rhizosphere	RDAAKDAFKDLREGEAGRKAKEALRDLRDGASGRSKS*
Ga0066709_1004984081	3300009137	Grasslands Soil	SDAGRKAKEAIKDLRDSEAVGKARDAAKDVLKDLREGDAGRKAKEALRDLRDGAGRGKS*
Ga0116224_103705081	3300009683	Peatlands Soil	KAREALRDLRDSEAVGKARDAARDVLRDLREGEAGRKAKAASRDLRDSTASRDKP*
Ga0116219_105544632	3300009824	Peatlands Soil	DSEAVGKARDAARDVLRDLREGEAGRKAKAASRDLRDSTASRDKP*
Ga0116223_103567401	3300009839	Peatlands Soil	ARDVLRDLREGEAGRKAKAAIRDLRDSTASRDKP*
Ga0126380_106610292	3300010043	Tropical Forest Soil	DLRDSEAVGKARDAARDMVRDLREGDAGRKAKEALRDLRDSTSGRSKS*
Ga0126382_105026381	3300010047	Tropical Forest Soil	DLRDSEAVGKARVAAKDAFKDLREGEAGRKAKEALRDLRDSASGRSKS*
Ga0099796_103310442	3300010159	Vadose Zone Soil	AAKDVMRDLREGDAGRKAREAVKDLRDSAAGRGKS*
Ga0074045_101325981	3300010341	Bog Forest Soil	KAEAALRDLRDSEVVSKARDAARDVLRDLREGEAGRKAKAAIRDLRDSTASRDKP*
Ga0074045_104120001	3300010341	Bog Forest Soil	KAEAALRDLRDSEVVSKARDAARDVLRDLREGEAGRKAKAALRDLRDTTTGRDKS*
Ga0126378_116416221	3300010361	Tropical Forest Soil	DAARDMVRDLREGDAGRKAKEALRDLRDSTSGRSKS*
Ga0134125_110415362	3300010371	Terrestrial Soil	DAAKDAFKDLREGEAGRKAREALRDLRDGASGRSKS*
Ga0134125_124866001	3300010371	Terrestrial Soil	DSEAVGKARDAAKDAFKDLREGEAGRKAKEALRDLRGSASGRSKS*
Ga0136449_1034683091	3300010379	Peatlands Soil	RKAREALRDLRDSEAVGKARDAARDVLRDLREGEAGRKAKAAIRDLRDSTASRDKP*
Ga0136449_1043666482	3300010379	Peatlands Soil	VGKARDAARDVLRDLREGEAGRKAKAAVRDLRDSTASRDKP*
Ga0134123_104537872	3300010403	Terrestrial Soil	ASRKAKDAIKDLRDSEAVGKARDAAKDAIKDLREGEAGRKAKEALRDLRDSASGRSKS*
Ga0126346_13365372	3300010865	Boreal Forest Soil	AKEAVRDLRDSEAVGKARDAAKDVLRDLREGDAGRKAKEALRDLRDNTAGRGKS*
Ga0124844_10357992	3300010868	Tropical Forest Soil	RKAKDALKDLRDSEAVGKARVAAKDAFKDLREGEAGRKAKEALRDLRDGASGRSKS*
Ga0124844_10374811	3300010868	Tropical Forest Soil	DLRDSEAVGKARVAAKDAFKDLREGEAGRKAKEALRDLRDGASGRSKS*
Ga0124844_10389562	3300010868	Tropical Forest Soil	AVGKARVAAKDAFKDLREGEAGRKAKEALRDLRDGASGRSKS*
Ga0150983_104503521	3300011120	Forest Soil	ARDAAKDVMRDLREGDAGRKAKEAIKDLRDSAAGRGKS*
Ga0137383_109105052	3300012199	Vadose Zone Soil	AKEAIKDLRDSEAVGKARDAAKDVLRDLREGDTGRKAKEAIKDLRDGASGRGKS*
Ga0137365_105259842	3300012201	Vadose Zone Soil	RDAAKDVLRDLREGDTGRKAKEAIKDLRDGASGRGKS*
Ga0137376_104374762	3300012208	Vadose Zone Soil	RTSDAGRKAESALRELRDSEAVGKARDAAKDAFKDLREGEAGRKAKEALRDLRDGASGRSKS*
Ga0137379_115545701	3300012209	Vadose Zone Soil	AVGKARQATRDALRDLRDKDAGRKAKAGPRDLKDGAADRDEA*
Ga0137378_109700131	3300012210	Vadose Zone Soil	SEAVGKARDAAKDVLKDLREGDAGRKAKEALRDLRDGAAGRGKS*
Ga0137378_118230901	3300012210	Vadose Zone Soil	GRKAKEAIKDLRDSEAVGKARDAAKDVLRDLREGDTGRKAKEAIKDLRDGASGRGKS*
Ga0137377_105062901	3300012211	Vadose Zone Soil	EGDAGRKAKEAIKDLRDSEAVGKARDAAKDVLRDLREGDTGRKAKEAIKDLRDGASGRGKS*
Ga0137372_106643141	3300012350	Vadose Zone Soil	IRDLRHSEAVGKARDAARDAMRDLREGETGRKAKEAARDLRDSAGGRGKS*
Ga0137384_109364941	3300012357	Vadose Zone Soil	RKAKEAIRDLRDSEAVGKARDAARDALRDLRDGDAGRKAKAALRDLRGDAPGDARGDARDSTASRDKP*
Ga0137390_105728251	3300012363	Vadose Zone Soil	IRDLRDSEAMGKAKDAARDALRDLRDGDAGRKAKAALRDLRGEARDSAASRDKS*
Ga0157329_10345811	3300012491	Arabidopsis Rhizosphere	DASRKAKEAIKDLRDSEAVGKARDAAKDAFKDLREGEAGRKAKEALRDLRDSASGRSKS*
Ga0157339_10264791	3300012505	Arabidopsis Rhizosphere	KAKDAIKDLRDSEAVVKARDAAKDAFKDLREGEAGRKAKEALRDLRDSASGRSKS*
Ga0137404_101678473	3300012929	Vadose Zone Soil	DLRDSEAVGKARDAAKDAIKDLREGEAGRKAKEALRDLRDGASGRSKS*
Ga0164303_110007921	3300012957	Soil	KDLRDSEAVGKARDAAKDAIKDLREGEAGRKAKEALRDLRDSASGRSKS*
Ga0164299_102934931	3300012958	Soil	DSDASRKAKEAIKDLRDSEAVAKARDAAKDAFKDLREGEAGRKAKEALRDLRDSASGRSKS*
Ga0164307_107387851	3300012987	Soil	SIRDLRHSDAVSKARDAARDVVRDLREGETGRKAKEAARDLRDNAGGRSKS*
Ga0157370_115730701	3300013104	Corn Rhizosphere	KDAIKDLRDSEAVGKARDAAKDAFKDLREGEAGRKAKEALRDLRGSASGRSKS*
Ga0157378_112265461	3300013297	Miscanthus Rhizosphere	DSDASRKAKDAIKDLRDSEAVGKARDAAKDAFKDLREGEAGRKAKEALRDLRDGASGRSKS*
Ga0132256_1027737722	3300015372	Arabidopsis Rhizosphere	GKARDAAKDAFKDLREGEAGRKAKEALRDLRDSASGRSKS*
Ga0182033_107952941	3300016319	Soil	KARDAAKDMVRDLREGDTGRKAKEALRDLRDSASGRSKS
Ga0182038_116361531	3300016445	Soil	AIRDLRDSEAVGKARDAARDVLRDLREGDAGRKAKEALRDLRDSASSRGKSQP
Ga0187766_108216082	3300018058	Tropical Peatland	VARDAARDALRDLREGDAGRKAKAALRDLRDSATSRDKS
Ga0066655_104681111	3300018431	Grasslands Soil	AIKDLRDSEAVGKARDAAKDVLKDLREGDAGRKAKEARRDLRDGAGRGKS
Ga0193728_12016692	3300019890	Soil	DAAKDAFKDLREGEAGRKAKEALRDLRDSASGRSKS
Ga0210399_104501601	3300020581	Soil	RDSEAVGKARDAAKDVLRDLREGDAGRKAKEALRDLRDNTAGRGKS
Ga0210395_108608792	3300020582	Soil	ARDAARDALRDLREGEAGRKAKAAIRDLRDSAAGRDKP
Ga0210404_103846571	3300021088	Soil	DAAKDVLRDLREGDAGRKAKEALRDLRDNTAGRGKS
Ga0213874_100423122	3300021377	Plant Roots	REAARDALRDLREGEAGRKAKEALRDLRGSTASRDRS
Ga0210389_115475951	3300021404	Soil	AKEAIRDLRDSDAVAKARDAAKDVMRDLREGDAGRKAKEALRDLRDSAAGRGKS
Ga0210394_106955712	3300021420	Soil	VGKARDAAKDVMRDLREGDAGRKAKEAIKDLRDSAAGRGKS
Ga0182009_103728841	3300021445	Soil	GKARDAAKDAFKDLREGEAGRKAKEALRDLRGSASGRSKS
Ga0210402_101665031	3300021478	Soil	EALRDLRDSEAVGKARDAARDALRDLREGEAGRKAKAALRDLRGDLKDSTTSRDKR
Ga0210410_102159533	3300021479	Soil	KARDAAKDVLRDLREGDAGRKAKEALRDLRDNTAGRGKS
Ga0126371_115283372	3300021560	Tropical Forest Soil	VGKARDAARDMVRDLREGDAGRKAKEALRDLRDSTSGRSKS
Ga0247670_10727621	3300024283	Soil	ASRKAKEAIKDLRDSEAVGKARDAAKDAFKDLREGEAGRKAKEALRDLRDGASGRSKS
Ga0208714_10149011	3300025527	Arctic Peat Soil	RDLRDSEAVGKARDAARDALRDLREGEAGRKAKAAIRDLRDGAGSRDKS
Ga0207692_103828611	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	KARDAAKDVLKDLREGDAGRKAKEALRDLRDGAGRGKS
Ga0207710_101808261	3300025900	Switchgrass Rhizosphere	AKDALKDLRDSEAVGKARDAAKDAFKDLREGEAGRKAREALRDLRDGASGRSKS
Ga0207680_104339941	3300025903	Switchgrass Rhizosphere	LKDLRDSEAVGKARDAAKDAFKDLREGEAGRKAREALRDLRDGASGRSKS
Ga0207684_100730361	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	DLRDSEAVGKARNAAKDVMRDLREGDAGRKAKEALRDMRDGAAGRGKS
Ga0207684_114837431	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	AGRKAREAVKDLRDSEAVGKARAAAKDVMRDLREGDAGRKAREAVKDLRDSAAGRGKS
Ga0207660_113890741	3300025917	Corn Rhizosphere	DAAKDAFKDLREGEAGRKAREALRDLRDGASGRSKS
Ga0207662_103070162	3300025918	Switchgrass Rhizosphere	DASRKAKDAIKDLRDSEAVGKARDAAKDAFKDLREGEAGRKAKEALRDLRGSASGRSKS
Ga0207664_111494471	3300025929	Agricultural Soil	EAIKDLRDSEAVGKARDAAKDVLKDLREGDAGRKAKEALRDLRDGAGRGKS
Ga0207706_100228345	3300025933	Corn Rhizosphere	SEAVGKARDAAKDAFKDLREGEAGRKAREALRDLRDGASGRSKS
Ga0207668_119765221	3300025972	Switchgrass Rhizosphere	VVKARDAAKDAFKDLREGEAGRKAREALRDLRDGASGRSKS
Ga0209350_11191171	3300026277	Grasslands Soil	KARDAAKDVLKDLREGDAGRKAKEARRDLRDGAGRGKS
Ga0257153_10703962	3300026490	Soil	DSEAVGKARDAAKDVLKDLREGDAGRKAKEALRDLRDGAGRGKS
Ga0209648_108392501	3300026551	Grasslands Soil	TGRKAKEAIRDLRDSAAVGKAKDAARDALRDLRDGDAGRKAKAALRDRRGEARDSAASRDKS
Ga0209178_11171372	3300027725	Agricultural Soil	AAIKDLRDSEAVGKARDAAKDVLKDLREGDAGRKAKEALRDLRDGAGRGKS
Ga0209275_100752882	3300027884	Soil	SDAGQKAKDALRDLRGSEAGRRARAAIRDLRDGADSHDKT
Ga0268265_107870671	3300028380	Switchgrass Rhizosphere	RDSEAVGKARDAAKDAFKDLREGEAGRKAREALRDLRDGASGRSKS
Ga0307290_101632722	3300028791	Soil	EAVGKARDAAKDAFKDLREGEAGRKAKEALRDLRDSASGRSKS
Ga0307292_101565932	3300028811	Soil	SDANSKAKDAIKDLRDSEALVKARDAAKDAFKDLREGEAGRKAKEALRDLRDSASGRSKS
Ga0302235_100049638	3300028877	Palsa	KAKAALQDLRDSDVVGKARDTAREAIRDLRDSDAGRKAKAALRDLRDSAGTGDKS
Ga0222749_103847341	3300029636	Soil	EGDAGRKAKEAIRDLRDSEAVGKARGAAKDVMRDLREGDAGRKAKEAIKDLRNSAAGRGK
Ga0302311_102553701	3300030739	Palsa	EALRDLRDSDAVGKARDTARDALRDLRDSDAGRKAKAAIRDMRDSSKTSDKS
Ga0265461_101857701	3300030743	Soil	KAAMQDLRDSDVVGKARDTARDALRDLKESDAGRKAKDALRDLRNSAGSSDKS
Ga0265461_109141911	3300030743	Soil	GKARDAARDALRDLREGEAGRKAKAAIRDLRDSAAGRDKP
Ga0170820_153115441	3300031446	Forest Soil	DAGRKAKEAVRDLRDSEAVGKARDAAKDVLRDLREGDAGRKAKEALRDLRDNTAGRGKS
Ga0318534_104646292	3300031544	Soil	KARDAARDMVRDLREGEAGRKAREALRDLRDGASGRSKS
Ga0318534_107182391	3300031544	Soil	AKEAFRDLRDSEAVGKAREAARDALRDLREGDAGRKAKAALRDLRDGAPSRDKS
Ga0318541_105010552	3300031545	Soil	AVGKARDAARDVLRDLREGDAGRKAKEALRDLRDSASSRGKSQP
Ga0318538_104669961	3300031546	Soil	RDSEATRKAKDAIRDLRDSEAVGKARDAAKDMVRDLREGEAGRKAREALRDLRDGASGRSKS
Ga0310686_1084884231	3300031708	Soil	GKARDAAKDALRDLREGEAGRKAKAAMRDLRDSAAGRDKP
Ga0310686_1187371771	3300031708	Soil	KAALQDLRDSDVVGKARDTAREAIRDLRDSDAGRKAKAALRDLRDSAGTGDKS
Ga0307474_115190701	3300031718	Hardwood Forest Soil	AVAKARDAAKDAFKDLREGEAGRKAREALRDLRDGASGRSKS
Ga0318493_108106771	3300031723	Soil	ATRKAKDAIRDLRDSEAVGKARDAAKDMVRDLREGEAGRKAREALRDLRDGASGRSKS
Ga0306918_103765911	3300031744	Soil	LRDSEAVGKARDAAKDMMRDLREGDAGRKAKEALRDLRDSASGRSKS
Ga0318492_101824842	3300031748	Soil	EAVGMARDAARDMVRDLREGEAGRKAREALRDLRDGASGRSKS
Ga0318554_104941851	3300031765	Soil	ARDAAKDMMRDLREGDAGRKAKEALRDLRDSASGRSKS
Ga0318526_104655152	3300031769	Soil	LRDSEAVVKARDAARDMVRDLREGEAGRKAREALRDLRDGASGRSKS
Ga0318529_100897121	3300031792	Soil	VGKARDAARDMVRDLREGEAGRKAREALRDLRDGASGRSKS
Ga0318550_103183901	3300031797	Soil	LRDSDASRKAKEAIRDLRDSEAVGKARDAARDVLRDLREGDAGRKAKEALRDLRDSASSRGKSQP
Ga0318568_109627751	3300031819	Soil	KEALRDLRDSEAVGKAREAARDVLRDLREGEAGRKAKEAFRDLRDSSAGRDKV
Ga0318512_102205432	3300031846	Soil	KAKEAFRDLRDSEAVGKARDAARDVLRDLREGEAGRKAKETSRDLRDSGAGRDQP
Ga0306925_107946772	3300031890	Soil	SRKAKEAIRDLRDSEAVGKARDAARDVLRDLREGDAGRKAKEALRDLRDSASSRGKSQP
Ga0318536_105993042	3300031893	Soil	VGKARDAAKDMMRDLREGDAGRKAKEALRDLRDSASGRSKS
Ga0318551_103089421	3300031896	Soil	ASRKAKEAIRDLRDSEAVGKARDAARDVLRDLREGDAGRKAKEALRDLRDSASSRGKSQP
Ga0318551_105010231	3300031896	Soil	ARDAARDMVRDLREGEAGRKAREALRDLRDGASGRSKS
Ga0318520_103193921	3300031897	Soil	RDSDASRKAKEAIRDLRDSEAVGKARDAARDMVRDLREGEAGRKAREALRDLRDGASGRSKS
Ga0306923_102261991	3300031910	Soil	QKAKDALRDLRDSEAVGKARDAAKDMMRDLREGDAGRKAKEALRDLRDSASGRSKS
Ga0310909_105237402	3300031947	Soil	GLAVGKARDAAKDMMRDLREGDAGRKAKEALRDLRDSASGRSKS
Ga0318569_106210931	3300032010	Soil	EALRDLRDSEAVGKAREAARDVLRDLREGEAGRKAKEAFRDLRDSSAGRDKV
Ga0310906_102154511	3300032013	Soil	KAKEAIKDLRDSEAVAKARDAAKDAFKDLREGEAGRKAKEALRDLRDGASGRSKS
Ga0318507_102173222	3300032025	Soil	RDSDASRKAKEAIRDLRDSEAVGKARDAARDVLRDLREGDAGRKAKEALRDLRDSASSRGKSQP
Ga0318558_102388542	3300032044	Soil	ATQKAKDALRDLRDSEAVGKARDAAKDMMRDLREGDAGRKAKEALRDLRDSASGRSKS
Ga0318513_106448161	3300032065	Soil	DSEAVEKARDAARDMVRDLREGDTGRKAKEALRDLRDSAPGRSKS
Ga0306924_111937962	3300032076	Soil	RDSEAVGKAREAARDVLRDLREGEAGRKAKEAFRDLRDSSAGRDKV
Ga0311301_118655571	3300032160	Peatlands Soil	SRRSRDAARDVLRDLREGEAGRKAKAAVRDLRDSTASRDKP
Ga0307471_1002624183	3300032180	Hardwood Forest Soil	DASRKAKEAIKDLRDSEAVGKARDAAKDAFKDLREGEAGRKAREALRDLRDSASGRSKS
Ga0307472_1007063251	3300032205	Hardwood Forest Soil	DAAKDAFKDLREGEAGRKAKEALRDLRGSASGRSKS
Ga0307472_1015884701	3300032205	Hardwood Forest Soil	LRDREAGRKAKEAIRDLRHSDAVSKARDAARDVVRDLREGETGRKAKEAARDLRDSAGGRSKS
Ga0306920_1015173052	3300032261	Soil	QEAFRDLRDSEAMGKARDAARDMVRDLREGDAGRKAKEALRDLRDSASGRSKS
Ga0335085_113223422	3300032770	Soil	DLRDSEAVGKARDAARDMVRDLREGDAGRKAKEALRDLRDSTSGRSKS
Ga0335078_115166022	3300032805	Soil	AVGKARDAAKDVLKDLREGDAGRKAKEALRDLRDGAAGRGKS
Ga0335083_101093241	3300032954	Soil	RKAQEAFRDLRDSEAVGKARDAARDLVRDLREGDAGRKAKEALRDLRDSASGRSKS
Ga0335083_105792991	3300032954	Soil	AAKEALKDLREGEAGRKARETLRDLRDSASGRSKS
Ga0335077_108214702	3300033158	Soil	KAKEAIKDLRDSEAVGKARDAAKDAIKDLREGEAGRKAKEALRDLRDGASGRSKS

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.42
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.42
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F050558

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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