NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F050581

Metagenome / Metatranscriptome Family F050581

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F050581
Family Type Metagenome / Metatranscriptome
Number of Sequences 145
Average Sequence Length 45 residues
Representative Sequence TIMRGDEQLIDATVRVACLDSGTLKPRAIPKDLFTEWRNAQ
Number of Associated Samples 117
Number of Associated Scaffolds 145

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 0.69 %
% of genes near scaffold ends (potentially truncated) 98.62 %
% of genes from short scaffolds (< 2000 bps) 92.41 %
Associated GOLD sequencing projects 111
AlphaFold2 3D model prediction Yes
3D model pTM-score0.34

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (57.931 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil
(25.517 % of family members)
Environment Ontology (ENVO) Unclassified
(31.034 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(52.414 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 4.35%    β-sheet: 15.94%    Coil/Unstructured: 79.71%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.34
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 145 Family Scaffolds
PF01618MotA_ExbB 66.21
PF02472ExbD 12.41
PF13103TonB_2 2.07
PF07676PD40 1.38
PF13544Obsolete Pfam Family 0.69
PF10431ClpB_D2-small 0.69
PF06508QueC 0.69
PF00691OmpA 0.69

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 145 Family Scaffolds
COG0848Biopolymer transport protein ExbDIntracellular trafficking, secretion, and vesicular transport [U] 12.41
COG0037tRNA(Ile)-lysidine synthase TilS/MesJTranslation, ribosomal structure and biogenesis [J] 0.69
COG0137Argininosuccinate synthaseAmino acid transport and metabolism [E] 0.69
COG0171NH3-dependent NAD+ synthetaseCoenzyme transport and metabolism [H] 0.69
COG0301Adenylyl- and sulfurtransferase ThiI (thiamine and tRNA 4-thiouridine biosynthesis)Translation, ribosomal structure and biogenesis [J] 0.69
COG0482tRNA U34 2-thiouridine synthase MnmA/TrmU, contains the PP-loop ATPase domainTranslation, ribosomal structure and biogenesis [J] 0.69
COG0519GMP synthase, PP-ATPase domain/subunitNucleotide transport and metabolism [F] 0.69
COG06037-cyano-7-deazaguanine synthase (queuosine biosynthesis)Translation, ribosomal structure and biogenesis [J] 0.69
COG0780NADPH-dependent 7-cyano-7-deazaguanine reductase QueF, C-terminal domain, T-fold superfamilyTranslation, ribosomal structure and biogenesis [J] 0.69
COG1606ATP-utilizing enzyme, PP-loop superfamilyGeneral function prediction only [R] 0.69


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms62.76 %
UnclassifiedrootN/A37.24 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300001471|JGI12712J15308_10204938Not Available519Open in IMG/M
3300001593|JGI12635J15846_10870871Not Available515Open in IMG/M
3300004080|Ga0062385_11210006All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria517Open in IMG/M
3300004092|Ga0062389_101242083All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria931Open in IMG/M
3300004092|Ga0062389_101680934All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria816Open in IMG/M
3300004152|Ga0062386_100208298All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria1540Open in IMG/M
3300004631|Ga0058899_10722972All Organisms → cellular organisms → Bacteria → Proteobacteria545Open in IMG/M
3300005538|Ga0070731_10483825All Organisms → cellular organisms → Bacteria → Proteobacteria824Open in IMG/M
3300005712|Ga0070764_10020889All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria3260Open in IMG/M
3300005921|Ga0070766_10946096All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria591Open in IMG/M
3300005994|Ga0066789_10004093All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Ectothiorhodospiraceae6409Open in IMG/M
3300005995|Ga0066790_10185868All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria889Open in IMG/M
3300005995|Ga0066790_10250016All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria756Open in IMG/M
3300006162|Ga0075030_100103902All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria2315Open in IMG/M
3300006174|Ga0075014_100084174All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria1450Open in IMG/M
3300006604|Ga0074060_12003405All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae600Open in IMG/M
3300009038|Ga0099829_10987855All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria698Open in IMG/M
3300009088|Ga0099830_11856680All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium504Open in IMG/M
3300009500|Ga0116229_10152198Not Available2025Open in IMG/M
3300009500|Ga0116229_10540789All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria962Open in IMG/M
3300009500|Ga0116229_10821507Not Available753Open in IMG/M
3300009520|Ga0116214_1426915Not Available519Open in IMG/M
3300009627|Ga0116109_1074748All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria685Open in IMG/M
3300009701|Ga0116228_10220944Not Available1348Open in IMG/M
3300009701|Ga0116228_10568934All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Neoptera → Endopterygota → Diptera → Nematocera → Culicomorpha → Culicoidea → Culicidae → Anophelinae → Anopheles → Cellia → Pyretophorus → gambiae species complex → Anopheles coluzzii771Open in IMG/M
3300009709|Ga0116227_10849933Not Available688Open in IMG/M
3300009787|Ga0116226_11286025All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → Mesorhizobium metallidurans → Mesorhizobium metallidurans STM 2683689Open in IMG/M
3300011120|Ga0150983_11407609Not Available520Open in IMG/M
3300011120|Ga0150983_11760940Not Available573Open in IMG/M
3300011120|Ga0150983_12237823All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria616Open in IMG/M
3300012202|Ga0137363_10918003All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Neoptera → Endopterygota → Diptera → Nematocera → Culicomorpha → Culicoidea → Culicidae → Anophelinae → Anopheles → Cellia → Pyretophorus → gambiae species complex → Anopheles coluzzii743Open in IMG/M
3300012203|Ga0137399_10141085Not Available1915Open in IMG/M
3300012203|Ga0137399_10479662All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae1042Open in IMG/M
3300012363|Ga0137390_10625768All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales1043Open in IMG/M
3300012363|Ga0137390_11540117Not Available604Open in IMG/M
3300012930|Ga0137407_10805607All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria887Open in IMG/M
3300014159|Ga0181530_10084751All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria1934Open in IMG/M
3300014164|Ga0181532_10346515Not Available833Open in IMG/M
3300014168|Ga0181534_10996577All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium505Open in IMG/M
3300014655|Ga0181516_10578172Not Available579Open in IMG/M
3300014657|Ga0181522_10906415Not Available544Open in IMG/M
3300014658|Ga0181519_10722556All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria615Open in IMG/M
3300016728|Ga0181500_1275346Not Available574Open in IMG/M
3300017946|Ga0187879_10414688All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria746Open in IMG/M
3300018009|Ga0187884_10320275Not Available626Open in IMG/M
3300018037|Ga0187883_10447979All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria663Open in IMG/M
3300020021|Ga0193726_1006698All Organisms → cellular organisms → Bacteria → Proteobacteria6632Open in IMG/M
3300020021|Ga0193726_1112848Not Available1220Open in IMG/M
3300020199|Ga0179592_10285853All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Neoptera → Endopterygota → Diptera → Nematocera → Culicomorpha → Culicoidea → Culicidae → Anophelinae → Anopheles → Cellia → Pyretophorus → gambiae species complex → Anopheles coluzzii735Open in IMG/M
3300020579|Ga0210407_10932077All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria665Open in IMG/M
3300020580|Ga0210403_10092037All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → unclassified Steroidobacteraceae → Steroidobacteraceae bacterium2453Open in IMG/M
3300020580|Ga0210403_10399290All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → Mesorhizobium metallidurans → Mesorhizobium metallidurans STM 26831123Open in IMG/M
3300020581|Ga0210399_10596893Not Available914Open in IMG/M
3300021178|Ga0210408_11244820Not Available567Open in IMG/M
3300021181|Ga0210388_11123746Not Available669Open in IMG/M
3300021401|Ga0210393_10297060All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans1312Open in IMG/M
3300021402|Ga0210385_10742479All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → asterids → campanulids → Asterales → Asteraceae → Asteroideae → Anthemideae → Anthemidinae → Tanacetum → Tanacetum cinerariifolium752Open in IMG/M
3300021402|Ga0210385_11511088All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium513Open in IMG/M
3300021420|Ga0210394_10529112All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria1037Open in IMG/M
3300021420|Ga0210394_10726409Not Available870Open in IMG/M
3300021433|Ga0210391_10791460Not Available741Open in IMG/M
3300021475|Ga0210392_10014223All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans4358Open in IMG/M
3300021475|Ga0210392_10209676All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans1364Open in IMG/M
3300021475|Ga0210392_10482277Not Available912Open in IMG/M
3300021475|Ga0210392_10950452All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Neoptera → Endopterygota → Diptera → Nematocera → Culicomorpha → Culicoidea → Culicidae → Anophelinae → Anopheles → Cellia → Pyretophorus → gambiae species complex → Anopheles coluzzii643Open in IMG/M
3300021478|Ga0210402_10792737Not Available872Open in IMG/M
3300021478|Ga0210402_11834551All Organisms → cellular organisms → Bacteria → Proteobacteria532Open in IMG/M
3300021479|Ga0210410_10333522All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans1360Open in IMG/M
3300021559|Ga0210409_10160360All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans2058Open in IMG/M
3300021559|Ga0210409_11694771Not Available508Open in IMG/M
3300022523|Ga0242663_1130247Not Available526Open in IMG/M
3300022531|Ga0242660_1256256All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium501Open in IMG/M
3300022722|Ga0242657_1063811All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae838Open in IMG/M
3300022726|Ga0242654_10065283All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans1069Open in IMG/M
3300022726|Ga0242654_10165609All Organisms → cellular organisms → Bacteria → Proteobacteria748Open in IMG/M
3300022726|Ga0242654_10279619All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria607Open in IMG/M
3300024186|Ga0247688_1094471Not Available515Open in IMG/M
3300024283|Ga0247670_1042007Not Available824Open in IMG/M
3300025679|Ga0207933_1049420All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria1501Open in IMG/M
3300025916|Ga0207663_11063491All Organisms → cellular organisms → Bacteria650Open in IMG/M
3300026319|Ga0209647_1069689Not Available1787Open in IMG/M
3300026490|Ga0257153_1079213All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria660Open in IMG/M
3300026557|Ga0179587_10980340All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria557Open in IMG/M
3300027330|Ga0207777_1019310All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans1326Open in IMG/M
3300027516|Ga0207761_1063204All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria718Open in IMG/M
3300027562|Ga0209735_1067984Not Available769Open in IMG/M
3300027567|Ga0209115_1055464All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria903Open in IMG/M
3300027605|Ga0209329_1071654All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Neoptera → Endopterygota → Diptera → Nematocera → Culicomorpha → Culicoidea → Culicidae → Anophelinae → Anopheles → Cellia → Pyretophorus → gambiae species complex → Anopheles coluzzii749Open in IMG/M
3300027633|Ga0208988_1053982All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria1022Open in IMG/M
3300027727|Ga0209328_10135461All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea → Rhabditida → Tylenchina → Panagrolaimomorpha → Strongyloidoidea → Strongyloididae → Parastrongyloides → Parastrongyloides trichosuri751Open in IMG/M
3300027795|Ga0209139_10072083Not Available1211Open in IMG/M
3300027812|Ga0209656_10237116All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria868Open in IMG/M
3300027860|Ga0209611_10790933All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium506Open in IMG/M
3300027889|Ga0209380_10693170Not Available585Open in IMG/M
3300027911|Ga0209698_10185938All Organisms → cellular organisms → Bacteria1687Open in IMG/M
3300028047|Ga0209526_10156945Not Available1592Open in IMG/M
3300028765|Ga0302198_10549485Not Available512Open in IMG/M
3300028781|Ga0302223_10307954All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium524Open in IMG/M
3300028813|Ga0302157_10546664All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria601Open in IMG/M
3300028879|Ga0302229_10243843All Organisms → cellular organisms → Bacteria → Proteobacteria815Open in IMG/M
3300028879|Ga0302229_10273846Not Available761Open in IMG/M
3300028879|Ga0302229_10417391All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria596Open in IMG/M
3300029911|Ga0311361_10422064Not Available1385Open in IMG/M
3300029911|Ga0311361_11136455All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria634Open in IMG/M
3300029913|Ga0311362_10570373All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans1019Open in IMG/M
3300029943|Ga0311340_11483134All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria532Open in IMG/M
3300029945|Ga0311330_10824471Not Available701Open in IMG/M
3300029953|Ga0311343_11105750Not Available613Open in IMG/M
3300029954|Ga0311331_11437785All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria566Open in IMG/M
3300029999|Ga0311339_11896585All Organisms → cellular organisms → Bacteria → Proteobacteria514Open in IMG/M
3300030057|Ga0302176_10412433Not Available544Open in IMG/M
3300030503|Ga0311370_12230203Not Available537Open in IMG/M
3300030519|Ga0302193_10482664All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria614Open in IMG/M
3300030617|Ga0311356_10025449All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae6416Open in IMG/M
3300030617|Ga0311356_11679799Not Available569Open in IMG/M
3300030740|Ga0265460_10858476All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria809Open in IMG/M
3300030740|Ga0265460_12919007Not Available514Open in IMG/M
3300030764|Ga0265720_1015804Not Available573Open in IMG/M
3300030998|Ga0073996_12452707Not Available721Open in IMG/M
3300030998|Ga0073996_12453089All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria920Open in IMG/M
3300031015|Ga0138298_1021729Not Available553Open in IMG/M
3300031023|Ga0073998_10043068All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria761Open in IMG/M
3300031023|Ga0073998_11395414Not Available853Open in IMG/M
3300031090|Ga0265760_10232838All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria632Open in IMG/M
3300031231|Ga0170824_109054756Not Available554Open in IMG/M
3300031236|Ga0302324_102030075All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → Mesorhizobium metallidurans → Mesorhizobium metallidurans STM 2683720Open in IMG/M
3300031258|Ga0302318_10121260All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans1193Open in IMG/M
3300031446|Ga0170820_14391885Not Available577Open in IMG/M
3300031524|Ga0302320_11856686All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria572Open in IMG/M
3300031525|Ga0302326_11723831Not Available825Open in IMG/M
3300031708|Ga0310686_101947800All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria740Open in IMG/M
3300031708|Ga0310686_110995287All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans2997Open in IMG/M
3300031715|Ga0307476_10227997All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans1357Open in IMG/M
3300031718|Ga0307474_11526072Not Available525Open in IMG/M
3300031754|Ga0307475_10093557All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans2336Open in IMG/M
3300031788|Ga0302319_10727762All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales999Open in IMG/M
3300031918|Ga0311367_11425741All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria681Open in IMG/M
3300032160|Ga0311301_11860062Not Available712Open in IMG/M
3300032828|Ga0335080_10532202All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans1244Open in IMG/M
3300033480|Ga0316620_11296293All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria716Open in IMG/M
3300033486|Ga0316624_10134067All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria1817Open in IMG/M
3300033983|Ga0371488_0419922Not Available616Open in IMG/M
3300034124|Ga0370483_0040920Not Available1438Open in IMG/M
3300034130|Ga0370494_186200Not Available537Open in IMG/M
3300034282|Ga0370492_0253012All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria716Open in IMG/M



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil25.52%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil8.28%
PalsaEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa8.28%
BogEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Bog8.28%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil6.90%
Host-AssociatedHost-Associated → Plants → Peat Moss → Unclassified → Unclassified → Host-Associated5.52%
Bog Forest SoilEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil4.14%
BogEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog4.14%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil4.14%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Peatland2.76%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds2.07%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil2.07%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil2.07%
Untreated Peat SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil2.07%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Soil2.07%
SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Soil2.07%
Peatlands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil1.38%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil1.38%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil1.38%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland0.69%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil0.69%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil0.69%
Arctic Peat SoilEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil0.69%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil0.69%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere0.69%
FenEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Fen0.69%
Peat SoilEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil0.69%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300001471Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2EnvironmentalOpen in IMG/M
3300001593Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2EnvironmentalOpen in IMG/M
3300004080Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3EnvironmentalOpen in IMG/M
3300004092Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3EnvironmentalOpen in IMG/M
3300004152Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3EnvironmentalOpen in IMG/M
3300004631Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF234 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300005538Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1EnvironmentalOpen in IMG/M
3300005712Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4EnvironmentalOpen in IMG/M
3300005921Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6EnvironmentalOpen in IMG/M
3300005994Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-049EnvironmentalOpen in IMG/M
3300005995Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-050EnvironmentalOpen in IMG/M
3300006162Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012EnvironmentalOpen in IMG/M
3300006174Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014EnvironmentalOpen in IMG/M
3300006604Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLMB (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300009038Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaGEnvironmentalOpen in IMG/M
3300009088Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaGEnvironmentalOpen in IMG/M
3300009500Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fc - Sphagnum magellanicum MGHost-AssociatedOpen in IMG/M
3300009520Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_1_NS metaGEnvironmentalOpen in IMG/M
3300009627Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_8_10EnvironmentalOpen in IMG/M
3300009701Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fc - Sphagnum fallax MGHost-AssociatedOpen in IMG/M
3300009709Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fb - Sphagnum magellanicum MGHost-AssociatedOpen in IMG/M
3300009787Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fa - Sphagnum fallax MGHost-AssociatedOpen in IMG/M
3300011120Combined assembly of Microbial Forest Soil metaTEnvironmentalOpen in IMG/M
3300012202Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaGEnvironmentalOpen in IMG/M
3300012203Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaGEnvironmentalOpen in IMG/M
3300012363Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaGEnvironmentalOpen in IMG/M
3300012930Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300014159Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_60_metaGEnvironmentalOpen in IMG/M
3300014164Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_30_metaGEnvironmentalOpen in IMG/M
3300014168Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_10_metaGEnvironmentalOpen in IMG/M
3300014655Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_10_metaGEnvironmentalOpen in IMG/M
3300014657Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_10_metaGEnvironmentalOpen in IMG/M
3300014658Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_10_metaGEnvironmentalOpen in IMG/M
3300016728Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_10_metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300017946Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10EnvironmentalOpen in IMG/M
3300018009Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_40EnvironmentalOpen in IMG/M
3300018037Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_10EnvironmentalOpen in IMG/M
3300020021Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2c1EnvironmentalOpen in IMG/M
3300020199Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300020579Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-MEnvironmentalOpen in IMG/M
3300020580Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-MEnvironmentalOpen in IMG/M
3300020581Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-MEnvironmentalOpen in IMG/M
3300021178Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-MEnvironmentalOpen in IMG/M
3300021181Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-OEnvironmentalOpen in IMG/M
3300021401Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-OEnvironmentalOpen in IMG/M
3300021402Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-OEnvironmentalOpen in IMG/M
3300021420Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-MEnvironmentalOpen in IMG/M
3300021433Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-OEnvironmentalOpen in IMG/M
3300021475Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-OEnvironmentalOpen in IMG/M
3300021478Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-MEnvironmentalOpen in IMG/M
3300021479Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-MEnvironmentalOpen in IMG/M
3300021559Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-MEnvironmentalOpen in IMG/M
3300022523Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-17-O (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022531Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-28-M (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022722Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-12-M (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022726Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-M (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300024186Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK29EnvironmentalOpen in IMG/M
3300024283Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK11EnvironmentalOpen in IMG/M
3300025679Arctic peat soil from Barrow, Alaska - NGEE Surface sample F53-3 deep-092012 (SPAdes)EnvironmentalOpen in IMG/M
3300025916Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026319Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_60cm (SPAdes)EnvironmentalOpen in IMG/M
3300026490Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-10-AEnvironmentalOpen in IMG/M
3300026557Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungalEnvironmentalOpen in IMG/M
3300027330Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 35 (SPAdes)EnvironmentalOpen in IMG/M
3300027516Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 34 (SPAdes)EnvironmentalOpen in IMG/M
3300027562Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M2 (SPAdes)EnvironmentalOpen in IMG/M
3300027567Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O2 (SPAdes)EnvironmentalOpen in IMG/M
3300027605Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_M3 (SPAdes)EnvironmentalOpen in IMG/M
3300027633Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA Ref_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300027727Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300027795Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM3 (SPAdes)EnvironmentalOpen in IMG/M
3300027812Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2 (SPAdes)EnvironmentalOpen in IMG/M
3300027860Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fc - Sphagnum magellanicum MG (SPAdes)Host-AssociatedOpen in IMG/M
3300027889Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)EnvironmentalOpen in IMG/M
3300027911Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)EnvironmentalOpen in IMG/M
3300028047Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300028765Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N2_2EnvironmentalOpen in IMG/M
3300028781Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E2_3EnvironmentalOpen in IMG/M
3300028813Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N3_3EnvironmentalOpen in IMG/M
3300028879Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N1_3EnvironmentalOpen in IMG/M
3300029911III_Bog_N2 coassemblyEnvironmentalOpen in IMG/M
3300029913III_Bog_N3 coassemblyEnvironmentalOpen in IMG/M
3300029943I_Palsa_N3 coassemblyEnvironmentalOpen in IMG/M
3300029945I_Bog_N2 coassemblyEnvironmentalOpen in IMG/M
3300029953II_Bog_E3 coassemblyEnvironmentalOpen in IMG/M
3300029954I_Bog_N3 coassemblyEnvironmentalOpen in IMG/M
3300029999I_Palsa_E3 coassemblyEnvironmentalOpen in IMG/M
3300030057Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E1_1EnvironmentalOpen in IMG/M
3300030503III_Palsa_E3 coassemblyEnvironmentalOpen in IMG/M
3300030519Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_E3_3EnvironmentalOpen in IMG/M
3300030617II_Palsa_N2 coassemblyEnvironmentalOpen in IMG/M
3300030740Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada ARE Co-assemblyEnvironmentalOpen in IMG/M
3300030764Metatranscriptome of plant litter microbial communities from Maridalen valley, Oslo, Norway - NLI1 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300030998Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Soil GP-3A (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300031015Forest soil microbial communities from Spain - ITS-tags Site 9-Mixed-thinned forest site A9_MS_autumn Metatranscriptome (Eukaryote Community Metatranscriptome) (version 2)EnvironmentalOpen in IMG/M
3300031023Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Soil TCEFA (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300031090Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031231Coassembly Site 11 (all samples) - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031236Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1EnvironmentalOpen in IMG/M
3300031258Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_1EnvironmentalOpen in IMG/M
3300031446Fir Summer Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031524Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_3EnvironmentalOpen in IMG/M
3300031525Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3EnvironmentalOpen in IMG/M
3300031708FICUS49499 Metagenome Czech Republic combined assemblyEnvironmentalOpen in IMG/M
3300031715Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05EnvironmentalOpen in IMG/M
3300031718Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05EnvironmentalOpen in IMG/M
3300031754Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515EnvironmentalOpen in IMG/M
3300031788Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_2EnvironmentalOpen in IMG/M
3300031918III_Fen_N3 coassemblyEnvironmentalOpen in IMG/M
3300032160Sb_50d combined assembly (MetaSPAdes)EnvironmentalOpen in IMG/M
3300032828Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4EnvironmentalOpen in IMG/M
3300033480Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D5_BEnvironmentalOpen in IMG/M
3300033486Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_N3_C1_D5_AEnvironmentalOpen in IMG/M
3300033983Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB23AN SIP fractionEnvironmentalOpen in IMG/M
3300034124Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_06D_14EnvironmentalOpen in IMG/M
3300034130Peat soil microbial communities from wetlands in Alaska, United States - Collapse_03_16EnvironmentalOpen in IMG/M
3300034282Peat soil microbial communities from wetlands in Alaska, United States - Eight_mile_03D_16EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI12712J15308_1020493813300001471Forest SoilILRGDEQLIDATVRVACLDSGTLKPRAIPKDLFTEWRNAK*
JGI12635J15846_1087087113300001593Forest SoilSIWRGDVQLTDATVRCACLDSATLRPRAIPKDLFTEWRDAQ*
Ga0062385_1121000623300004080Bog Forest SoilQSIWRGDVQLIDATVRCACLDSATLRPRAIPKDLFTEWRDAQ*
Ga0062389_10124208323300004092Bog Forest SoilIHFKQAIWREERQLIDATARVACLDSGTLKARAIPKDLFTEWRNAQ*
Ga0062389_10168093423300004092Bog Forest SoilRLAGATIHFKQMITRGEEQLIDATVRVACLDSGTLKPRAIPKDLFTEWRNAQ*
Ga0062386_10020829843300004152Bog Forest SoilWRGDVQLIDASTRVACLDSVSLKPRAIPRDLFTEWRNGQ*
Ga0058899_1072297233300004631Forest SoilMRGEEQLIDASTRVACLDSSTLKPRAIPQDLFMEWRNAE*
Ga0070731_1048382523300005538Surface SoilDDVQLTDATVRVACLDSGTLKPRAIPKDLFAEWRNAQ*
Ga0070764_1002088913300005712SoilQLIDATVRVACLDSGTLKPRAIPKDLFTEWRNAQ*
Ga0070766_1094609623300005921SoilLTGATIEFKQAVYRGDLQLISAGTRVACLDSATLKPRAIPKDLFQEWRNGQ*
Ga0066789_10004093103300005994SoilFKQRIWRGGAQLIEATTRVACLDSGTLKPRAIPKDLFMEWRDAQ*
Ga0066790_1018586813300005995SoilGATIHFQQTIMRGDEQLIDATVRVACLDSGTLKPRAIPKDLFTEWRNAQ*
Ga0066790_1025001623300005995SoilATIVFKQTILRGDEKLIDAGVRAACLDSGTLKPRPIPKDLFVEWRNGQ*
Ga0075030_10010390213300006162WatershedsRMKGASFSFKQEIWRDAEQLIDASTRVVCLDSGSLKPKAIPMDLFKEWRK*
Ga0075014_10008417443300006174WatershedsLDRLGGATFWFKQAIWRGDTQLIDATTRVACLDSGTLRPRAIPKDLFREWRNE*
Ga0074060_1200340523300006604SoilTIMRGDAQLIEASTRVACLDSGTLKPRPIPKDLFVEWRNGQ*
Ga0099829_1098785523300009038Vadose Zone SoilLSGATIVFKQTIMRGDVQLIDASARVACLDSGTLKARPIPKDLFVEWRHGRVA*
Ga0099830_1185668023300009088Vadose Zone SoilEILVTAELERLTGATIVFKQTIMRGDVQLIDASARVACLDSGTLKARPIPKDLFVEWRNERVA*
Ga0116229_1015219843300009500Host-AssociatedRGNAQLIDATARVACLDSGTLRPRPIPKDLFTEWRHG*
Ga0116229_1054078933300009500Host-AssociatedTGATIRFQQSIWREDLQLIDAAVRCACLDSATLRPRAIPKDLFTEWRDDE*
Ga0116229_1082150723300009500Host-AssociatedLQRLTGATIVFKQTITRDALQLIDATARVACLDSGTLKPRPIPKDLFMEWRDAQ*
Ga0116214_142691513300009520Peatlands SoilIWRGEEQLIEATTRVACLDSGTLKPRAIPKDLFMEWRNAQ*
Ga0116109_107474813300009627PeatlandTAELAQLTGATIVFKQTIRRGDVQLIDASTRVACLDAGTMKARPIPKDLFMEWRDAQ*
Ga0116228_1022094443300009701Host-AssociatedFKQTIMRGAEQLIDATARVACLDSGVLKPRAIPKDLFMEWR*
Ga0116228_1056893423300009701Host-AssociatedSFKQTILRGDEQLIDASTRVACLDAGTLKPRAIPKDLFTEWRNGQ*
Ga0116227_1084993313300009709Host-AssociatedRRGDVQLIDATARVACLDAGSMKARPIPKDLFMEWRNAE*
Ga0116226_1128602523300009787Host-AssociatedEFKQAIWRDDVQLIDASTRAACLDSKSLRPRAIPKDMFMEWRNAE*
Ga0150983_1140760923300011120Forest SoilRGDEQLIDAKTRVACLDSSTLKPRAIPKDLFVEWRNAE*
Ga0150983_1176094023300011120Forest SoilMRGDEQLIDASTRVACLDSSTLKPRAIPKDLFVEWRNA*
Ga0150983_1223782313300011120Forest SoilEVQLIDATVRCACLDSATLRPRAIPKDLFTEWRDAQ*
Ga0137363_1091800323300012202Vadose Zone SoilGATIVFKQTIMRGDVQLIDASTRVACLDSGTLKARPIPKDLFVEWRHGQ*
Ga0137399_1014108513300012203Vadose Zone SoilGATIVFKQTIMRGDVQLIDASARVACLYSVTLKARPIPKDLFM*
Ga0137399_1047966213300012203Vadose Zone SoilILVTAELERLSGATIVFKQTIMRADVQLIDASARVACLDSGTLKARPIPKDLFMEWRHGRVA*
Ga0137390_1062576813300012363Vadose Zone SoilSGATISFKQTIMRGEAQLIDASTRVACLDSGTLKPRAIPKDLFLEWRNGQ*
Ga0137390_1154011713300012363Vadose Zone SoilERLSGATIVFKQTIMRGDVQLIDASARVACLDSGTLKPRPIPKDLFVEWRNGQ*
Ga0137407_1080560713300012930Vadose Zone SoilDEQLIDATVRVACLDSGTLKPRAIPKDLFTEWRNAQ*
Ga0181530_1008475143300014159BogSGATISFKQAIWRGEVQLIEATTRVACLDSGTLKPRAIPKDLFMEWRNAQ*
Ga0181532_1034651513300014164BogRLSGATISFKQAIWRGEVQLIEATTRVACLDSGTLKPRAIPKDLFMEWRNAQ*
Ga0181534_1099657713300014168BogTIVFRQTIRRGEVQLIDATARVACLDAGTLKARPIPKNLFVEWRNAQ*
Ga0181516_1057817223300014655BogVTAELERLSGATIRFKQSIWREDLQLIDAAVRCACLDSATLRPRAIPKDLFTEWRDAQ*
Ga0181522_1090641513300014657BogTAELAKLTGATIEFKQSIWREDVRLIDATVRCACLDSATLRPRAIPKDLFTEWRDAQ*
Ga0181519_1072255613300014658BogEQLIDATARVACLDASTMKARPIPKDLFMEWRNAQ*
Ga0181500_127534623300016728PeatlandLSGATIRFKQSIWREDLQLIDAAVRCACLDSATLRPRAIPKDLFSEWRDAQ
Ga0187879_1041468823300017946PeatlandELVKLTGATIHFKQAIWRQDLQLIDATARVACLDSATLRPRAIPKDLFTEWRDAE
Ga0187884_1032027513300018009PeatlandVIVTAELEKLTGATIVFRQTIRRGDVQLIDATARVACLDASTMKARPIPKDLFMEWRNAQ
Ga0187883_1044797913300018037PeatlandGATISFKQTIRRGDAQLIEAAARVACLDSGTLRPRAIPKDLFTEWRNAQ
Ga0193726_100669813300020021SoilFEQTIMRGDEQLIDATVRVACLDSGTLKPRAIPKDLFTEWRNAQ
Ga0193726_111284813300020021SoilIIRGGARLIDASTRVACLDSGTLRPRAIPKDLFTEWRDGK
Ga0179592_1028585323300020199Vadose Zone SoilRGDMQLIDASTRVACLDSGTLKPRAIPKDLFREWRNGQ
Ga0210407_1093207713300020579SoilRLSGATIVFKQTIMRGDVQLIDASARVACLDSGTLKARPIPKDLFVEWRHGRVA
Ga0210403_1009203753300020580SoilGATICFKQTIMRGGVQLIDASTRVACLDSGTLKPRPIPKDLFVEWRNGQ
Ga0210403_1039929033300020580SoilIHFKQSIWRGSVQLIDANVRAACLHSESLRPRPIPRDLFMEWRNAE
Ga0210399_1059689323300020581SoilERLSGATIYFKQTILRDEVQLIDASARVACLDSGTLKPRPIPKDLFVEWRNGQ
Ga0210408_1124482013300021178SoilHFRQTIMRGDEQLIDAAVRVACLDSGTLKPRAIPKDLFTEWRNAQ
Ga0210388_1112374623300021181SoilTIERGGEQLIDATVRVACLDSGTLKPRAIPKDLFTEWRNAQ
Ga0210393_1029706013300021401SoilISFKQTIMRGEAQLIDARTRVACLDSGTLKPRAIPTDLFLEWRNGQ
Ga0210385_1074247923300021402SoilGATISFKQTIRRGDQQLIDASTRVACLDSVTLKPRGIPKDMFMEWRNG
Ga0210385_1151108823300021402SoilALDKLTGATIVFKQTIRRGDVQLIDATARVACLDAATMKARPIPRNLFMEWRDAQ
Ga0210394_1052911233300021420SoilAELVRLTGATICFKQTIMRGDVQLIDASTRVACLDSGTLKPRPIPKDLFVEWRNDQ
Ga0210394_1072640913300021420SoilELVRLGGATIHFKQAIWREERQLIDATARVACLDSGTLKARAIPKDLFTEWRNAQ
Ga0210391_1079146013300021433SoilSGATICFKQTIMRGGVQLIDASTRVACLDSGTLKPRPIPKDLFVEWRNGQ
Ga0210392_1001422373300021475SoilEQLIDAAVRVACLDSGTLKPRAIPKDLFTEWRNAQ
Ga0210392_1020967613300021475SoilAGATIHFKQTIMRGEEQLIDAAVRVACLDSGTLKPRAIPKDLFTEWRNAE
Ga0210392_1048227713300021475SoilSGATIVFKQSITRGDVQLIDASARVACLDSGTLKPRPIPKDLFVEWRNGQ
Ga0210392_1095045213300021475SoilLSGATIVFKQTIMREDVQLIDASVRVACLDSGTLKARPIPKDLFMEWRNGQ
Ga0210402_1079273713300021478SoilRGDVQLIDASTRVACLDSGTLKPRPIPKDLFMEWRRNGQ
Ga0210402_1183455123300021478SoilTIVFKQTIMRGDVQLIDANARVACLDSGTLKPRPIPKDLFVEWRNGQ
Ga0210410_1033352213300021479SoilLERLAGATIHFKQTIMRGDEQLIDATVRVACLDSGTLKPRAIPKDLFTEWRNAQ
Ga0210409_1016036013300021559SoilFRQTIWRTDVQLIDAEVRVACLDSVTLKPRGLPKDLFMEWRNAE
Ga0210409_1169477123300021559SoilEQLIDASTRVACLDSSTLKPRAIPQDLFMEWRNAE
Ga0242663_113024723300022523SoilRGDEQLIDAAVRVACLDSGTLKPRAIPKDLFTEWRNAQ
Ga0242660_125625623300022531SoilGGEQLIDAAVRVACLDSGTLKPRAIPKDLFTEWRNAQ
Ga0242657_106381113300022722SoilGAAQLIDASTRVACLDSGTLKPRAIPKDLFLEWRNGQ
Ga0242654_1006528333300022726SoilGDEQLIDASVRVACLDSGTLKPRAIPKDLFTESRNAQ
Ga0242654_1016560923300022726SoilDEQLIDASVRVACLDSGTLKPRAIPKDLFTEWRNAQ
Ga0242654_1027961923300022726SoilDVQLIDASARVACLDSGTLKARPIPKDLFVEWRHGRVA
Ga0247688_109447123300024186SoilDAQLIDASTRVACLDSGTLKPRPIPKDLFMEWRNGQ
Ga0247670_104200713300024283SoilTITFKQTIMRGDAQLIDASTRVACLDSGTLKPRPIPKDLFMEWRNGQ
Ga0207933_104942013300025679Arctic Peat SoilLMRLSGATISFKQSIWRGELQLIDASTRVACLDSGTLKPRAIPKDLFMEWRSNAE
Ga0207663_1106349113300025916Corn, Switchgrass And Miscanthus RhizosphereEQLIDATVRVACLDSGTLKPRAIPKDLFTEWRNAE
Ga0209647_106968943300026319Grasslands SoilGEAQLIDASTRVACLDSGTLKPRAIPKDLFLEWRNGQ
Ga0257153_107921323300026490SoilIVFKQTIMRGDVQLIDASARVACLDSGTMKARPIPKDLFMEWRHGRVA
Ga0179587_1098034013300026557Vadose Zone SoilAELARLSGATISFKQTIMRGDMQLIDASTRVACLDSGTLKPRAIPKDLFREWRNGQ
Ga0207777_101931013300027330Tropical Forest SoilGATIYFKQTIMRGDEQLTDATVRVACLDSGTLKPRAIPKDLFTEWRNAQ
Ga0207761_106320413300027516Tropical Forest SoilKQTIMRGDEQLTDATVRVACLDSGTLKPRAIPKDLFTEWRNAQ
Ga0209735_106798423300027562Forest SoilGDEQLIDATVRVACLDSGTLKPRAIPKDLFTEWRNAQ
Ga0209115_105546423300027567Forest SoilLVTAELERLSGATIVFKQTILRGDVQLIDANVRAACLDSGTLKPRPIPKDLFVEWRNGQ
Ga0209329_107165423300027605Forest SoilQTIMRGDVQLIDASARVACLDSGTLKARPIPKDLFVEWRHGQ
Ga0208988_105398213300027633Forest SoilATAELERLSGATICFKQTIMRGDAQLIDASTRVACLDSGTLKPRPIPKDLFVEWRNNGK
Ga0209328_1013546123300027727Forest SoilIMRGDVQLIDASARVACLDSGTLKPRPIPKDLFVEWRNGRVA
Ga0209139_1007208323300027795Bog Forest SoilGRLTGATIHFKQSIWRGSVQLIDANVRAACLDSESLRPRPIPKDLFMEWRNAQ
Ga0209656_1023711623300027812Bog Forest SoilLGGATINFKQTIWRGDVQLIDASTRVACLDSDSLKPRAIPRDLFTEWRHGQ
Ga0209611_1079093323300027860Host-AssociatedTGATIVFKQTIMRGAEQLIDATARVACLDSGALKPRAIPKDLFMEWRNAE
Ga0209380_1069317013300027889SoilWLTGATIEFKQAVYRGDLQLISAGTRVACLDSATLKPRAIPKDLFQEWRNGQ
Ga0209698_1018593843300027911WatershedsRMKGASFSFKQEIWRDAEQLIDASTRVVCLDSGSLKPKAIPMDLFKEWRK
Ga0209526_1015694543300028047Forest SoilISFKQTIMRGEAQLIDANTRVACLDSGTLKPRAIPTDLFLEWRNGQ
Ga0302198_1054948523300028765BogGDVQLIDADTRVACLDSATLKPRAIPKDLFSEWRNAE
Ga0302223_1030795423300028781PalsaTAELQRLTGATIEFKQAVFRGDSQLISAGTRVACLDSATLKPRAIPKDLFQEWRNGQ
Ga0302157_1054666413300028813BogWRDEEQLIDASTRVACLDSATLKPRAIPKDLFREWRVGK
Ga0302229_1024384313300028879PalsaELVKLTGATIQFKQAIWRRDLQLIDASARVACLDSATLRPRPIPKDLFMEWRDAE
Ga0302229_1027384613300028879PalsaTIEFKQAVYRGDSQLISADTRVACLDSATLKPRAIPKDLFQEWRNGQ
Ga0302229_1041739123300028879PalsaIEFKQSIWRGEVQLVDATVRCACLDSATLRPRAIPKDLFMEWRDAE
Ga0311361_1042206413300029911BogAELQRLTGATIVFKQTIMRGAEQLIDATARVACLDSGALKPRAIPKDLFMEWRNAE
Ga0311361_1113645523300029911BogLTGATIVFDQTIMRGTEQLIDATARVACLNSGTLKPCAIPKDLFTEWRDAQ
Ga0311362_1057037313300029913BogGATILFKQPIRCLDVQLIDASTRVACLDAASLRARAIPKDLFTEWRNAE
Ga0311340_1148313413300029943PalsaAELERLTGATIVFKQTIRRGAAQLIDASTRVACLDSGTLKPRPIPKDLFVEWRNGQ
Ga0311330_1082447113300029945BogSFKQTIMRGDLQLIDASTRVACLDSGTLKPRAIPKDLFLEWRNGQ
Ga0311343_1110575013300029953BogGDEQLIDATARVACLDASTMKARPIPKDLFMEWRNAQ
Ga0311331_1143778513300029954BogRLSGATILFKQVIARGDTQLIDANVRVACLDSGTLKPRPIPKDLFVEWRNGE
Ga0311339_1189658523300029999PalsaVQLIDATTRVACLDSSTLKPRAIPKDLFTEWRNVE
Ga0302176_1041243313300030057PalsaTIRRDDVQLIDATTRVACLDSSTLKPRPIPKDLFTEWRNVE
Ga0311370_1223020313300030503PalsaFKQTIMRGAEQLIDATVRVACLDSGTLKPRAIPKDMFTEWRDAQ
Ga0302193_1048266413300030519BogWRGDVQLIDADTRVACLDSATLKPRAIPKDLFSEWRNAE
Ga0311356_10025449103300030617PalsaEQLIDATVRVACLDSGTLKPRAIPKDLFTEWRNAQ
Ga0311356_1167979923300030617PalsaKQTIMRGDEQLIDSSVRVACLDSGTLKPRAIPKDLFVEWRNAQ
Ga0265460_1085847613300030740SoilSGDVQLIEATTRVACLDSGTLKPRAIPKDLFMEWRNGQ
Ga0265460_1291900723300030740SoilDGEQLIDATVRVACLDSGTLKPRAIPKDLFTEWRNAQ
Ga0265720_101580413300030764SoilMRGSEQLIHATVRVACLDSGTLKPRPIPKDLFTEWRNAE
Ga0073996_1245270713300030998SoilQTIMRGEAQLIDASTRVACLDSGTLKPRAIPTDLFSEWRNGQ
Ga0073996_1245308933300030998SoilIMRGEAQLIDASTRVACLDSGTLKPRAIPKDLFLEWRNGQ
Ga0138298_102172913300031015SoilEQLIDATVRVACLDSGALKPRAIPKDLFTEWRNAQ
Ga0073998_1004306813300031023SoilLAGATIHFNQTILRGDEQLIDATVRVACLDSGTLKPRAIPKDLFTEWRNAQ
Ga0073998_1139541423300031023SoilIMRGDVQLIDASARVACLDSGTLKARPIPKDLFVEWRHGQ
Ga0265760_1023283823300031090SoilWRGDVQLIVATVRCACLDSATLRPRAIPKDLFTEWRDAQ
Ga0170824_10905475613300031231Forest SoilIEFKQTIMRDMAQLIDASTRVACLDSGSLKPRPIPKDLFVEWRNGQ
Ga0302324_10203007523300031236PalsaEDVRLIDATVRCACLDSATLRPRAIPKDLFTEWRDAQ
Ga0302318_1012126013300031258BogVRGEAQLIDASVRVACLDSGTLKPRPIPKDLFVEWRNGE
Ga0170820_1439188523300031446Forest SoilTISFKQTILRGEAQLIDASTRVACLDSGTLKPRAIPKDLFLEWRNGQ
Ga0302320_1185668623300031524BogVMRGDLRLIDAHTRVACLDSGTLKPRAIPKDLFVEWRNGQ
Ga0302326_1172383123300031525PalsaELERLTGATIVFKQTILRGAAQLIDASTRVACLDSGTLKPRPIPKDLFVEWRNGQ
Ga0310686_10194780013300031708SoilIEFKQSIWREEVQLIDATVRCACLDSATLRPRAIPKDLFTEWRDAQ
Ga0310686_11099528713300031708SoilQTILRGDAQLIDASARVACLDSGTLKPRPIPRDLFVEWRNGE
Ga0307476_1022799713300031715Hardwood Forest SoilQTIMRGDAQLIDARVRVACLDSGTLKPRPIPKDLFVEWRNGQ
Ga0307474_1152607223300031718Hardwood Forest SoilTILRGDEQLIDATVRVACLDSGTLKPRAIPKDLFTEWRNAQ
Ga0307475_1009355713300031754Hardwood Forest SoilTIMRGDEQLIDATVRVACLDSGTLKPRAIPKDLFTEWRNAQ
Ga0302319_1072776233300031788BogMRGGLQLIDANTRVACLDSGTLKPRAIPADLFTEWRHG
Ga0311367_1142574113300031918FenRMKGASFSFKQEIWRNAEQLIDASTRVVCLDSGSLKPKAIPMDLFQEWRNEQ
Ga0311301_1186006213300032160Peatlands SoilQAIWRGEAQLIEATTRVACLDSGTLKPRAIPKDLFMEWRNAQ
Ga0335080_1053220233300032828SoilLGKLSGATIHFKQAIWRGDQQLIDANVRAACLDSETLRPRPIPKDLFMEWRNAQ
Ga0316620_1129629323300033480SoilFKQTIWRGDVQLIDATTRVACLDSVKLKPCAIPKDLLSEWRDEQ
Ga0316624_1013406713300033486SoilGDVQLIDATTRVACLDSVKLKPCAIPKDLLSEWRDEQ
Ga0371488_0419922_457_6153300033983Peat SoilRLSGATIVFKQTIMRGETQLIDASARVACLDSGTLKPRPIPKDLFVEWRNEQ
Ga0370483_0040920_1290_14273300034124Untreated Peat SoilVFKQTIRRGDVRLIDATARVACLDASTMKARPIPKDLFMEWRNAQ
Ga0370494_186200_406_5373300034130Untreated Peat SoilKQTIWRGEVQLIDADTRVACLDSESLKPRAIPKDLFTEWRHGQ
Ga0370492_0253012_3_1223300034282Untreated Peat SoilRRGDVQLIDATARVACLDAATMRARPIPKDLFMEWRNAQ


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