Metagenome Family F050607

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F050607
Family Type	Metagenome
Number of Sequences	145
Average Sequence Length	44 residues
Representative Sequence	MTERALPGQVADGLRALSTEIDRLDQAAADRYGLNRTDMRALDI
Number of Associated Samples	90
Number of Associated Scaffolds	145

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	7.86 %
% of genes near scaffold ends (potentially truncated)	96.55 %
% of genes from short scaffolds (< 2000 bps)	92.41 %
Associated GOLD sequencing projects	85
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.53

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (51.724 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (53.793 % of family members)
Environment Ontology (ENVO)	Unclassified (62.759 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (54.483 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 47.22% β-sheet: 0.00% Coil/Unstructured: 52.78%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.53
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.53
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 145 Family Scaffolds
PF00171	Aldedh	6.21
PF01223	Endonuclease_NS	2.07
PF00293	NUDIX	1.38
PF03575	Peptidase_S51	1.38
PF00155	Aminotran_1_2	1.38
PF09489	CbtB	0.69
PF14226	DIOX_N	0.69
PF03703	bPH_2	0.69
PF00232	Glyco_hydro_1	0.69
PF13193	AMP-binding_C	0.69
PF01670	Glyco_hydro_12	0.69
PF00144	Beta-lactamase	0.69
PF04237	YjbR	0.69
PF00528	BPD_transp_1	0.69
PF02518	HATPase_c	0.69

COG ID	Name	Functional Category	% Frequency in 145 Family Scaffolds
COG0014	Gamma-glutamyl phosphate reductase	Amino acid transport and metabolism [E]	6.21
COG1012	Acyl-CoA reductase or other NAD-dependent aldehyde dehydrogenase	Lipid transport and metabolism [I]	6.21
COG4230	Delta 1-pyrroline-5-carboxylate dehydrogenase	Amino acid transport and metabolism [E]	6.21
COG1864	DNA/RNA endonuclease G, NUC1	Nucleotide transport and metabolism [F]	2.07
COG1680	CubicO group peptidase, beta-lactamase class C family	Defense mechanisms [V]	0.69
COG1686	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	0.69
COG2315	Predicted DNA-binding protein with Ã¢â‚¬Ëœdouble-wingÃ¢â‚¬â„¢ structural motif, MmcQ/YjbR family	Transcription [K]	0.69
COG2367	Beta-lactamase class A	Defense mechanisms [V]	0.69
COG2723	Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase	Carbohydrate transport and metabolism [G]	0.69
COG3402	Uncharacterized membrane protein YdbS, contains bPH2 (bacterial pleckstrin homology) domain	Function unknown [S]	0.69
COG3428	Uncharacterized membrane protein YdbT, contains bPH2 (bacterial pleckstrin homology) domain	Function unknown [S]	0.69

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	51.72 %
Unclassified	root	N/A	48.28 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	51.72 %
Unclassified	root	N/A	48.28 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	51.72 %
Unclassified	root	N/A	48.28 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.28 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	46.21 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.28 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	44.14 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.69 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.28 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	40.69 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	0.69 %
Clostridia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.28 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	5.52 %
Micromonosporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales	1.38 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	1.38 %
Eubacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	0.69 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.69 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	0.69 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.28 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	5.52 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	1.38 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	1.38 %
Symbiobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Symbiobacteriaceae	0.69 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.69 %
Intrasporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae	0.69 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.28 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	5.52 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	1.38 %
Arsenicicoccus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae → Arsenicicoccus	0.69 %
Micromonospora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora	0.69 %
Symbiobacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Symbiobacteriaceae → Symbiobacterium	0.69 %
Couchioplanes	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Couchioplanes	0.69 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.69 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.28 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	5.52 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	1.38 %
Symbiobacterium terraclitae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Symbiobacteriaceae → Symbiobacterium → Symbiobacterium terraclitae	0.69 %
Arsenicicoccus piscis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae → Arsenicicoccus → Arsenicicoccus piscis	0.69 %
Couchioplanes caeruleus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Couchioplanes → Couchioplanes caeruleus	0.69 %
Micromonospora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora	0.69 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.69 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.69 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004463\|Ga0063356_103915168	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	641	Open in IMG/M
3300005435\|Ga0070714_101648053	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	627	Open in IMG/M
3300005436\|Ga0070713_100960275	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	823	Open in IMG/M
3300005439\|Ga0070711_100655496	All Organisms → cellular organisms → Bacteria	880	Open in IMG/M
3300005534\|Ga0070735_10844456	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	539	Open in IMG/M
3300005764\|Ga0066903_102099766	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1087	Open in IMG/M
3300005764\|Ga0066903_104501365	Not Available	743	Open in IMG/M
3300005764\|Ga0066903_105284086	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	683	Open in IMG/M
3300005764\|Ga0066903_108335466	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	529	Open in IMG/M
3300005843\|Ga0068860_101471006	Not Available	703	Open in IMG/M
3300005843\|Ga0068860_101613802	All Organisms → cellular organisms → Bacteria	670	Open in IMG/M
3300006059\|Ga0075017_100506840	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	916	Open in IMG/M
3300006173\|Ga0070716_100326273	All Organisms → cellular organisms → Bacteria	1077	Open in IMG/M
3300009521\|Ga0116222_1113850	Not Available	1165	Open in IMG/M
3300009792\|Ga0126374_10246406	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1164	Open in IMG/M
3300009792\|Ga0126374_11390503	Not Available	571	Open in IMG/M
3300009792\|Ga0126374_11506319	Not Available	552	Open in IMG/M
3300010046\|Ga0126384_10534968	Not Available	1016	Open in IMG/M
3300010046\|Ga0126384_12496824	Not Available	501	Open in IMG/M
3300010048\|Ga0126373_10624915	Not Available	1131	Open in IMG/M
3300010048\|Ga0126373_10977734	Not Available	912	Open in IMG/M
3300010048\|Ga0126373_12397950	Not Available	587	Open in IMG/M
3300010360\|Ga0126372_10629174	Not Available	1035	Open in IMG/M
3300010361\|Ga0126378_10924532	Not Available	978	Open in IMG/M
3300010361\|Ga0126378_13253601	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	516	Open in IMG/M
3300010366\|Ga0126379_10858582	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1009	Open in IMG/M
3300010366\|Ga0126379_11084482	All Organisms → cellular organisms → Bacteria	906	Open in IMG/M
3300010366\|Ga0126379_12504678	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	614	Open in IMG/M
3300010376\|Ga0126381_101009785	All Organisms → cellular organisms → Bacteria	1200	Open in IMG/M
3300010376\|Ga0126381_101083113	All Organisms → cellular organisms → Bacteria	1157	Open in IMG/M
3300012955\|Ga0164298_10287662	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae → Arsenicicoccus → Arsenicicoccus piscis	1011	Open in IMG/M
3300012971\|Ga0126369_11209124	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	845	Open in IMG/M
3300013105\|Ga0157369_11795671	Not Available	623	Open in IMG/M
3300013307\|Ga0157372_10665598	Not Available	1212	Open in IMG/M
3300014325\|Ga0163163_10501669	Not Available	1275	Open in IMG/M
3300016270\|Ga0182036_11724380	Not Available	529	Open in IMG/M
3300016341\|Ga0182035_12076464	Not Available	516	Open in IMG/M
3300016404\|Ga0182037_11930360	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	529	Open in IMG/M
3300016422\|Ga0182039_10931516	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	777	Open in IMG/M
3300016445\|Ga0182038_11542066	Not Available	597	Open in IMG/M
3300017924\|Ga0187820_1004621	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3189	Open in IMG/M
3300017973\|Ga0187780_11167675	Not Available	564	Open in IMG/M
3300020581\|Ga0210399_10977874	Not Available	683	Open in IMG/M
3300020583\|Ga0210401_10948838	Not Available	719	Open in IMG/M
3300021374\|Ga0213881_10200623	Not Available	881	Open in IMG/M
3300021478\|Ga0210402_11418834	Not Available	622	Open in IMG/M
3300021560\|Ga0126371_10388809	Not Available	1535	Open in IMG/M
3300021560\|Ga0126371_10845545	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1060	Open in IMG/M
3300021560\|Ga0126371_11167757	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Symbiobacteriaceae → Symbiobacterium → Symbiobacterium terraclitae	907	Open in IMG/M
3300021560\|Ga0126371_11827371	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	728	Open in IMG/M
3300025929\|Ga0207664_10699697	Not Available	911	Open in IMG/M
3300028381\|Ga0268264_11259867	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	749	Open in IMG/M
3300031543\|Ga0318516_10131921	Not Available	1429	Open in IMG/M
3300031543\|Ga0318516_10181322	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1213	Open in IMG/M
3300031543\|Ga0318516_10233407	Not Available	1064	Open in IMG/M
3300031544\|Ga0318534_10114369	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	1549	Open in IMG/M
3300031544\|Ga0318534_10587263	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	633	Open in IMG/M
3300031544\|Ga0318534_10772185	Not Available	541	Open in IMG/M
3300031546\|Ga0318538_10435344	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	710	Open in IMG/M
3300031546\|Ga0318538_10746005	Not Available	531	Open in IMG/M
3300031573\|Ga0310915_10119674	Not Available	1797	Open in IMG/M
3300031573\|Ga0310915_10155855	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1581	Open in IMG/M
3300031573\|Ga0310915_11295774	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	502	Open in IMG/M
3300031640\|Ga0318555_10019162	All Organisms → cellular organisms → Bacteria	3195	Open in IMG/M
3300031640\|Ga0318555_10158111	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1215	Open in IMG/M
3300031668\|Ga0318542_10387737	Not Available	721	Open in IMG/M
3300031668\|Ga0318542_10665955	Not Available	544	Open in IMG/M
3300031680\|Ga0318574_10163947	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora	1267	Open in IMG/M
3300031681\|Ga0318572_10094170	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	1681	Open in IMG/M
3300031681\|Ga0318572_10783017	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	567	Open in IMG/M
3300031681\|Ga0318572_10876697	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	533	Open in IMG/M
3300031720\|Ga0307469_10030591	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3117	Open in IMG/M
3300031736\|Ga0318501_10361274	Not Available	781	Open in IMG/M
3300031736\|Ga0318501_10602125	Not Available	603	Open in IMG/M
3300031736\|Ga0318501_10860094	Not Available	504	Open in IMG/M
3300031744\|Ga0306918_10533044	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	920	Open in IMG/M
3300031744\|Ga0306918_11279979	Not Available	564	Open in IMG/M
3300031747\|Ga0318502_10092518	Not Available	1665	Open in IMG/M
3300031747\|Ga0318502_10409148	Not Available	807	Open in IMG/M
3300031747\|Ga0318502_10433884	Not Available	783	Open in IMG/M
3300031748\|Ga0318492_10622263	Not Available	577	Open in IMG/M
3300031751\|Ga0318494_10501890	Not Available	707	Open in IMG/M
3300031764\|Ga0318535_10327133	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	685	Open in IMG/M
3300031764\|Ga0318535_10396051	Not Available	616	Open in IMG/M
3300031765\|Ga0318554_10161608	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1273	Open in IMG/M
3300031769\|Ga0318526_10078268	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	1300	Open in IMG/M
3300031770\|Ga0318521_10022250	All Organisms → cellular organisms → Bacteria	2980	Open in IMG/M
3300031771\|Ga0318546_10543973	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	816	Open in IMG/M
3300031779\|Ga0318566_10185929	Not Available	1031	Open in IMG/M
3300031782\|Ga0318552_10216433	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	971	Open in IMG/M
3300031782\|Ga0318552_10421016	Not Available	681	Open in IMG/M
3300031792\|Ga0318529_10066446	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	1583	Open in IMG/M
3300031796\|Ga0318576_10337608	Not Available	712	Open in IMG/M
3300031796\|Ga0318576_10450052	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	608	Open in IMG/M
3300031797\|Ga0318550_10054197	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1810	Open in IMG/M
3300031797\|Ga0318550_10237723	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	883	Open in IMG/M
3300031797\|Ga0318550_10531832	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	566	Open in IMG/M
3300031798\|Ga0318523_10359864	Not Available	724	Open in IMG/M
3300031798\|Ga0318523_10494633	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	605	Open in IMG/M
3300031819\|Ga0318568_10633326	Not Available	666	Open in IMG/M
3300031821\|Ga0318567_10428478	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	750	Open in IMG/M
3300031821\|Ga0318567_10789166	Not Available	538	Open in IMG/M
3300031831\|Ga0318564_10156780	Not Available	1015	Open in IMG/M
3300031831\|Ga0318564_10312989	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	692	Open in IMG/M
3300031831\|Ga0318564_10344610	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	655	Open in IMG/M
3300031845\|Ga0318511_10438655	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	601	Open in IMG/M
3300031845\|Ga0318511_10547543	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	537	Open in IMG/M
3300031846\|Ga0318512_10065418	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	1651	Open in IMG/M
3300031846\|Ga0318512_10106925	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1320	Open in IMG/M
3300031910\|Ga0306923_10751802	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1081	Open in IMG/M
3300031910\|Ga0306923_10780346	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1057	Open in IMG/M
3300031910\|Ga0306923_10845935	Not Available	1007	Open in IMG/M
3300031910\|Ga0306923_11628695	Not Available	670	Open in IMG/M
3300031942\|Ga0310916_11375556	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	579	Open in IMG/M
3300031954\|Ga0306926_11929544	Not Available	666	Open in IMG/M
3300031954\|Ga0306926_12072571	Not Available	637	Open in IMG/M
3300031981\|Ga0318531_10140060	Not Available	1081	Open in IMG/M
3300032001\|Ga0306922_11484239	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	678	Open in IMG/M
3300032001\|Ga0306922_11533842	Not Available	665	Open in IMG/M
3300032010\|Ga0318569_10377716	Not Available	661	Open in IMG/M
3300032025\|Ga0318507_10192091	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	880	Open in IMG/M
3300032025\|Ga0318507_10523222	Not Available	516	Open in IMG/M
3300032035\|Ga0310911_10788654	Not Available	549	Open in IMG/M
3300032044\|Ga0318558_10129865	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	1201	Open in IMG/M
3300032059\|Ga0318533_10379995	Not Available	1030	Open in IMG/M
3300032059\|Ga0318533_11426961	Not Available	505	Open in IMG/M
3300032060\|Ga0318505_10109314	Not Available	1258	Open in IMG/M
3300032063\|Ga0318504_10628803	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	516	Open in IMG/M
3300032065\|Ga0318513_10055115	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1789	Open in IMG/M
3300032065\|Ga0318513_10508951	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	589	Open in IMG/M
3300032067\|Ga0318524_10316342	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	808	Open in IMG/M
3300032089\|Ga0318525_10571811	Not Available	577	Open in IMG/M
3300032090\|Ga0318518_10726432	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	505	Open in IMG/M
3300032261\|Ga0306920_100109652	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4092	Open in IMG/M
3300032828\|Ga0335080_12167640	Not Available	535	Open in IMG/M
3300032892\|Ga0335081_10495398	Not Available	1539	Open in IMG/M
3300033290\|Ga0318519_10010876	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3729	Open in IMG/M
3300033290\|Ga0318519_10310783	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	924	Open in IMG/M
3300033290\|Ga0318519_10661384	Not Available	637	Open in IMG/M
3300034818\|Ga0373950_0006982	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Couchioplanes → Couchioplanes caeruleus	1740	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	92.41%
Host-Associated	Host-Associated	7.59%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	91.03%
Plants	Host-Associated → Plants	7.59%
Aquatic	Environmental → Aquatic	1.38%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	90.34%
Rhizoplane	Host-Associated → Plants → Rhizoplane	4.14%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.76%
Freshwater	Environmental → Aquatic → Freshwater	0.69%
Sediment	Environmental → Aquatic → Sediment	0.69%
Rock-Dwelling (Subaerial Biofilms)	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms)	0.69%
Roots	Host-Associated → Plants → Roots	0.69%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	82.07%
Loam	Environmental → Terrestrial → Soil → Loam	6.21%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	3.45%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.07%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.07%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.69%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.69%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified	0.69%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.69%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.69%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.69%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	65.52%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	16.55%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.45%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	3.45%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.76%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.07%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.07%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.69%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.69%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified	0.69%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.69%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.69%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.69%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	53.79%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	14.48%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	11.03%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.76%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.76%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.07%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	2.07%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.38%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	1.38%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.69%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.69%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.69%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.69%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	0.69%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.69%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.69%
Exposed Rock	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified → Exposed Rock	0.69%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.69%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.69%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.69%
Rhizosphere Soil	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil	0.69%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005534	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1	Environmental	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300009521	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaG	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300013105	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017924	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_5	Environmental	Open in IMG/M
3300017973	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MG	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021374	Barbacenia macrantha exposed rock microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - ER_R08	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031764	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031769	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f24	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031779	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f22	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031792	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f23	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031797	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031831	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f20	Environmental	Open in IMG/M
3300031845	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18	Environmental	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300031859	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f25	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031981	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032010	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f22	Environmental	Open in IMG/M
3300032025	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f20	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032060	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18	Environmental	Open in IMG/M
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental	Open in IMG/M
3300032065	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20	Environmental	Open in IMG/M
3300032067	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f22	Environmental	Open in IMG/M
3300032089	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f23	Environmental	Open in IMG/M
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M
3300034818	Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_3	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0063356_1039151681	3300004463	Arabidopsis Thaliana Rhizosphere	MTGPPEEQVLAALRALSTEIDLLDHVAADRYGLNPTDMRSLDVVGQL
Ga0070714_1016480532	3300005435	Agricultural Soil	MATRALPGQVAGGLRALSTEIDRLDQAAADRYGLNRTDMRAL
Ga0070713_1009602751	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MATRALPGQVAGGLRALSTEIDRLDQAAADRYGLNRTDMRALDILGRAGPLA
Ga0070711_1006554962	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MTGRVLPLQVAASLRALSTEIDRLDQVAADRYGLNRTDMRALDIVGQAGPL
Ga0070735_108444562	3300005534	Surface Soil	MAERVHPGQVADGLRALSTEIDRLDQAAADRYGLNRTDMRALDILGRA
Ga0068859_1015611561	3300005617	Switchgrass Rhizosphere	MSKSLPREAYAGVRALGMEIDRLDQVAADRFGLNRTDMRVLDILSTTGPLTPTVLADL
Ga0066903_1020997661	3300005764	Tropical Forest Soil	MTSRALPVQVAVSLRALSTEIDRLDQAAADRYGLNRTDMRAL
Ga0066903_1045013651	3300005764	Tropical Forest Soil	MTERALAGQVAGSLRALSTEIDRLDQVAADRYGLNRTDM
Ga0066903_1052840861	3300005764	Tropical Forest Soil	MAERALPGQVAGGLRALSTDIDRLDQAAADRYGLNRTDMRALDILGRA
Ga0066903_1083354661	3300005764	Tropical Forest Soil	MTVRALPVQVAVSLRALSTEIDRLDQAAADRYGLNRTDMRALDIT
Ga0068860_1014710062	3300005843	Switchgrass Rhizosphere	MSRSLPSEAYAGVRALGMEIDRLDQVAADRFGLNRTDM
Ga0068860_1016138021	3300005843	Switchgrass Rhizosphere	MTGRVLPRQVAASLRALSTEIDRLDQVAADRYGLNRTDMRALD
Ga0075017_1005068402	3300006059	Watersheds	MSEPALPARVAGSLRALSTEIDRLDQAAADRYGLNRTDMRALDILGRA
Ga0070716_1003262733	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MTGRVLPREVAASLRALSTEIDRLDQVAADRYGLNRTDMRALDIV
Ga0116222_11138503	3300009521	Peatlands Soil	MPGAADVVASLRALSAELDHLDEVAARHYGLNRTDMRALEI
Ga0126374_102464061	3300009792	Tropical Forest Soil	VFGSLRALGTEIDRLDQAAADRYGLNRTDMRALDILGSKGPLAPTDLARLLGF
Ga0126374_113905031	3300009792	Tropical Forest Soil	MTARALPRQVAASLRALSTEIDRLDQAAADRYGLNRTDM
Ga0126374_115063192	3300009792	Tropical Forest Soil	MAERALPGQVVGGLRALSTEIDRLDQAAADRYGLN
Ga0126384_105349682	3300010046	Tropical Forest Soil	MPEQALPARVADGLRALSTEIDRLDQAAADRYGLNRTDMR
Ga0126384_124968242	3300010046	Tropical Forest Soil	MAERALPGQVVGSLRALSTEIDRLDQAAADLYGLNRTD
Ga0126373_106249153	3300010048	Tropical Forest Soil	MSERALPARAAGSLRALSTEIDRLDQAAADRYGLNRTDMR
Ga0126373_109777342	3300010048	Tropical Forest Soil	MPERALPAQVTGGLRALSTEMDRLDQAAADLYGLNRTDMRALEIVGRVGPLT
Ga0126373_123979502	3300010048	Tropical Forest Soil	MSERALPARVAGGLRALSTEMDRLDQAAADLYGLNRTDMRALEIVGRVGPLT
Ga0126372_106291742	3300010360	Tropical Forest Soil	MGSRSLPDQVFGSLRALTTEIDRLDQAAADRYGLNRTDM
Ga0126378_109245323	3300010361	Tropical Forest Soil	MTERALPGQVAGGLRALSTEIDRLDQAAADRYGLNRTDMR
Ga0126378_132536012	3300010361	Tropical Forest Soil	MTVRALPGQVAASLRALSTEIDRLDQVAADRYGLNRTDMRALDIVGQAG
Ga0126379_108585821	3300010366	Tropical Forest Soil	MTIRALPVQVAVSLRALSTEIDRLDQAAADRYGLNRTDMRALDITG
Ga0126379_110844821	3300010366	Tropical Forest Soil	MSERALPAQVTGNLRALSTEIDRLDQAAADRYGLNRTDMRALDI
Ga0126379_125046781	3300010366	Tropical Forest Soil	MAERALAGQVAAGLRALSTEIDRLDQVAADRYGLNRTDMRALDILGQA
Ga0126381_1010097851	3300010376	Tropical Forest Soil	MSEWALATRVAGSLRALSTATDRLDQAVADRYGLNRTDMSALDIVG
Ga0126381_1010831133	3300010376	Tropical Forest Soil	MSERALPARVTGSLRALSTEIDRLDQAAADRYGLNRTDMRALDII
Ga0164298_102876623	3300012955	Soil	MSRSLPREAYAGLRALGMEIDRLDQVAADRFGLNRTDMRVLDILST
Ga0126369_112091241	3300012971	Tropical Forest Soil	MSERALPAQVTGNLRALSTEIDRLDQAAADRYGLNRTDMRALDIVG
Ga0157369_110442742	3300013105	Corn Rhizosphere	MSRSLPREAYAGVRALGMEIDRLDQVAADRFGLNRTDMRVLDILSTTGPL
Ga0157369_117956711	3300013105	Corn Rhizosphere	MTERALLGQVVGGLRALSTEIDRLDQAAADRYGLNRTDMR
Ga0157372_106655983	3300013307	Corn Rhizosphere	MTERALLGQVVGGLRALSTEIDRLDQAAADRYGLN
Ga0163163_105016693	3300014325	Switchgrass Rhizosphere	MTERALLGQVVGGLRALSTEIDRLDQAAADRYGLNRTDMRAL
Ga0182036_117243802	3300016270	Soil	MSERALLARVVASLRALSTDIDRLDQAAADRYGLNRTDMRA
Ga0182035_120764641	3300016341	Soil	MAQRSLAGEAYAKMRALSTEIDRLDQAAADRFGLNRTDMR
Ga0182037_119303602	3300016404	Soil	MAERALPGQVAGDLRALSTEIDRLDQAAADRYGLNRTDMRALEILGRVGPLAPTALAHLLGF
Ga0182039_109315162	3300016422	Soil	MPEQALPAQVADGLRALSTEIDRLDQAAADRYGLNRTDMRALDII
Ga0182038_115420662	3300016445	Soil	MSERVLPARVAGSLRALSTEIDRLDQAAADQYGLNRTDMRALDI
Ga0187820_10046211	3300017924	Freshwater Sediment	MAERVHPGQVADGLRALSTEIDRLDQAAADRYGLNRTDMRALDILGRAG
Ga0187780_111676751	3300017973	Tropical Peatland	MSARALPRQVAASLRALSTEIDRLDQVAADRYGLNRTDMRALDIVGQ
Ga0210399_109778742	3300020581	Soil	MSTRALPGQVAGGLRALSTEIDRLDQAAADRYGLNRTDMRAL
Ga0210401_109488381	3300020583	Soil	MSTRALPGQVAGGLRALSTEIDRLDQAAADRYGLNRTDM
Ga0213881_102006232	3300021374	Exposed Rock	MAERALPGQVAGGLRALSTEIDRLDQAAADRYGLNRTDMRAM
Ga0210402_114188341	3300021478	Soil	MAGRVLPREVAASLRALSTEIDRLDQVAADRYGLNRTDMRA
Ga0126371_103888093	3300021560	Tropical Forest Soil	MPKRALPARAAGSLRALSTDIDRLDQAAADRYGLNR
Ga0126371_108455451	3300021560	Tropical Forest Soil	MAERAHPGQVVDGLRALSTEIDRLDQAAADRYGLNRTDMR
Ga0126371_111677572	3300021560	Tropical Forest Soil	MTGRVKRPRVRQVLAALRALSTEIDRLDQVGADRFRLNRTDLRALD
Ga0126371_118273711	3300021560	Tropical Forest Soil	MATRALPGQVAGGLRALSTEIDRLDQAAADRYGLNRTDMRALDI
Ga0207664_106996971	3300025929	Agricultural Soil	MTERALLGQVVGGLRALSTEIDRLDQAAADRYGLNRTD
Ga0207683_110157191	3300026121	Miscanthus Rhizosphere	MSRSLPREAYAGVRALGMEIDRLDQVAADRFGLNRTDMRVLDILSTTGPLTPTVLA
Ga0268264_112598671	3300028381	Switchgrass Rhizosphere	MTGRVLPRQVAASLRALSTEIDRLDQVAADRYGLNRTDMRALDIV
Ga0318516_101319211	3300031543	Soil	MSERVLPARVTGSLRALSTEIDRLDQAAADRYGLNRTDMRALD
Ga0318516_101813223	3300031543	Soil	MTERALPGQVAGGLRALSTEIDRLDQAAADRYGLNRT
Ga0318516_102334071	3300031543	Soil	MTDRVLPRQVAASLRALSTEIDRLDQVAADRYGLNR
Ga0318534_101143691	3300031544	Soil	MADRSLAGQVAGRLRALSTEIDRLDQAAADRYGLNRTDMRALDILGRA
Ga0318534_105872632	3300031544	Soil	MMERPLPGQVVGGLRALSTEIDRLDQAAADRYGLNRTDMRALDIVGRAG
Ga0318534_107721852	3300031544	Soil	MIERPLPGQVVGGLRALSTEIDRLDQAAADRYGLNRTDMR
Ga0318538_104353442	3300031546	Soil	MSERVLPARVTGSLRALSTEIDRLDQAAADRYGLNRTDMRALDII
Ga0318538_107460052	3300031546	Soil	MAQRSLAGEAYAKMRALSTEIDRLDQAAADRFGLNRTD
Ga0310915_101196743	3300031573	Soil	MMERPLPGQVVGGLRALSTEIDRLDQAAADRYGLNRTDMRALDIVGRA
Ga0310915_101558553	3300031573	Soil	MSERVLPARVTGSLRALSTEIDRLDQAAADRYGLNRTDMRALDIISA
Ga0310915_112957742	3300031573	Soil	MAQRSLAGEAYAKMRALSTEIDRLDQAAADRFGLNRTDMRALDILSNG
Ga0318555_100191626	3300031640	Soil	MPDRALAGEIAGRLRALSTEIDRLDQAAADQYGLNRTDMRALDIIGQA
Ga0318555_101581112	3300031640	Soil	MSERALLARVVASLRALSTDIDRLDQAAADRYGLNRTDMRALDI
Ga0318542_103877371	3300031668	Soil	MVERALPGRVAASLRALSTEIDRLDHAAAERYGLNRTDMRALD
Ga0318542_106659551	3300031668	Soil	MAERALPGQVAGGLRALSTEIDRLDQAAADRYGLN
Ga0318574_101639473	3300031680	Soil	MPEQALPAQVADGLRALSTEIDRLDQAAADRYGLNRT
Ga0318572_100941701	3300031681	Soil	MADRSLAGQVAGRLRALSTEIDRLDQAAADRYGLNRTDMRALGILGQA
Ga0318572_100956861	3300031681	Soil	MAQRSLAGEAYAKMRALSTEIDRLDQAAADRFGLNRTDMRALDILSNGPLAPSARMSVRL
Ga0318572_107830171	3300031681	Soil	MTERALPGQVADGLRALSTEIDRLDQAAADRYGLNRTDMRALDITGRYGPLAP
Ga0318572_108766972	3300031681	Soil	MAERALPGQVAGGLRALSTEIDRLDQAAADRYGLNRTDMRALDILGRA
Ga0307469_100305911	3300031720	Hardwood Forest Soil	MSRSLPREAYAGVRALGMEIDRLDQVAADRFGLNR
Ga0318501_103612741	3300031736	Soil	MTIRALPVQVAVSLRALSTEIDRLDQAAADRYGLNRTDMRALDITGRVGP
Ga0318501_106021251	3300031736	Soil	MSERALPGRVAASLRALSTEIDRLDHAAAERYGLNRTDMRALDITGRAG
Ga0318501_108600941	3300031736	Soil	MTERALPGQVAGGLRALSTEIDRLDQAAAGRYGLN
Ga0306918_105330441	3300031744	Soil	MTERALPGQVAGGLRALSTEIDRLDQAAADRYGLNRTDM
Ga0306918_112799791	3300031744	Soil	MSERALPAQVTGSLRALSTEIDRLDQAAADQYGLNRTDMRAL
Ga0318502_100925185	3300031747	Soil	MAQRSLAGEAYAKMRALSTEIDRLDQAAADRFGLNRTDMRALDILS
Ga0318502_104091481	3300031747	Soil	MTVRALPVQVAVSLRALSTEIDRLDQAAADRYGLNRTDMRALDITGRAGPLA
Ga0318502_104338841	3300031747	Soil	MSERVLPARVTGSLRALSTEIDRLDQAAADRYGLNRTDMRA
Ga0318492_106222631	3300031748	Soil	MMERPLPGQVVGGLRALSTEIDRLDQAAADRYGLNRTDMRA
Ga0318494_105018901	3300031751	Soil	MAERALPGQVASGLRALSTEIDRLDQAAADRYGLNRTDMRA
Ga0318535_103271332	3300031764	Soil	MSERVLPARVTGSLRALSTEIDRLDQAAADRYGLNRTDMRALDIISAA
Ga0318535_103960512	3300031764	Soil	MTVRALPVQVAVSLRALSTEIDRLDQAAADRYGLNRTDMRALDITGRAGPLAPT
Ga0318554_101616081	3300031765	Soil	MTERALPGQVAGGLRALSTEIDRLDQAAADRYGLNRTDMRA
Ga0318526_100782685	3300031769	Soil	MADRSLAGQVAGRLRALSTEIDRLDQAAADRYGLNR
Ga0318521_100222501	3300031770	Soil	MMERPLPGQVVGGLRALSTEIDRLDQAAADRYGLNRTDMRALDI
Ga0318546_105439731	3300031771	Soil	MSEQALPAQVTGSLRALSTEIDRLDQAAADRYGLNRTDMRALDL
Ga0318566_101859291	3300031779	Soil	MSERALPAQVTGSLRALSTEIDRLDQAAADQYGLNRTDMRALD
Ga0318552_102164333	3300031782	Soil	MTVRALPVQVAVSLRALSTEIDRLDQAAADRYGLNRTDMRALDITGRVGPLA
Ga0318552_104210162	3300031782	Soil	MSERALPAQVTGSLRALSTEIDRLDQAAADQYGLNRTDM
Ga0318529_100664461	3300031792	Soil	MADRSLAGQVAGRLRALSTEIDRLDQAAADRYGLNRTDMRALD
Ga0318576_103376081	3300031796	Soil	MSERVLPARVAGSLRALSTEIDRLDQAAADQYGLNRTDMRALDIVGRAR
Ga0318576_104500522	3300031796	Soil	MIERPLPGQVVGGLRALSTEIDRLDQAAADRYGLNRTDMRALDIVGRAGPLAPTALA
Ga0318550_100541971	3300031797	Soil	MTERALPGQVADGLRALSTEIDRLDQAAADRYGLNRTDMRALDI
Ga0318550_102377231	3300031797	Soil	MADRSLAGQVAGRLRALSTEIDRLDQAAADRYGLNRTDM
Ga0318550_105318321	3300031797	Soil	MSERVLPARVTGSLRALSTEIDRLDQAAADRYGLNRTDMRALDIIS
Ga0318523_103598642	3300031798	Soil	MTERALPGQVAGALRALSTEIDRLDQAAADRYGLNRT
Ga0318523_104946331	3300031798	Soil	MMERPLPGQVVGGLRALSTEIDRLDQAAADRYGLNRTDMRALDIVGRAGPLA
Ga0318568_106333262	3300031819	Soil	MSERALPGRVAASLRALSTEIDRLDHAAAERYGLNRTDMRALDITGRA
Ga0318567_104284781	3300031821	Soil	MTVRALPVQVAVGLRALSTEIDRLDQAAADRYGLNRTDMRALDIT
Ga0318567_107891661	3300031821	Soil	MTERALPGLVAGALRALSTEIDRLDQAAADRYGLNRTDMRALDIT
Ga0318564_101567802	3300031831	Soil	MSERALPAQVTGSLRALSTEIDRLDQAAADQYGLNR
Ga0318564_103129891	3300031831	Soil	MSERVLPARVTGSLRALSTEIDRLDQAAADRYGLNRTDMRALDI
Ga0318564_103446101	3300031831	Soil	MSERALPAQVTGSLRALSTEIDRLDQAAADRYGLNRTDMRALDIIGRA
Ga0318511_104386551	3300031845	Soil	MTIRALPVQVAVSLRALSTEIDRLDQAAADRYGLNRTDMRALDITGRVGPLAPSE
Ga0318511_105475432	3300031845	Soil	MADRALPGQVVGGLRALSTEIDRLDQAAADRYGLNRTDMRALDILGRAGPLAPTALAHL
Ga0318512_100654185	3300031846	Soil	MADRSLAGQVAGRLRALSTEIDRLDQAAADRYGLNRTDMRALDILGQA
Ga0318512_101069251	3300031846	Soil	MERPLPGQVVGGLRALSTEIDRLDQAAADRYGLNRTDMRALDIVGPA
Ga0318527_100274131	3300031859	Soil	MAQRSLAGEAYAKMRALSTEIDRLDQAAADRFGLNRTDMRALDILSNGPLAPS
Ga0306923_107518021	3300031910	Soil	MSERALPAQVTGSLRALSTEIDRLDQAAADRYGLNRTDMRALDII
Ga0306923_107803463	3300031910	Soil	MADRALPGQVVGGLRALSTEIDRLDQAAADRYGLNRTDMRALDILGR
Ga0306923_108459353	3300031910	Soil	MTIRALPVQVAVSLRALSTEIDRLDQAAADRYGLNRTDMRALDIT
Ga0306923_116286951	3300031910	Soil	MTVRALPVQVAVGLRALSTEIDRLDQAAADRYGLNRTDMR
Ga0310916_113755562	3300031942	Soil	MAERALPGQVAGDLRALSTEIDRLDQAAADRYGLNRTDMRALEILGR
Ga0306926_119295442	3300031954	Soil	MSERALPAQVTGSLRALSTEIDRLDQAAADRYGLNR
Ga0306926_120725712	3300031954	Soil	MSERVLPARVTGSLRALSTEIDRLDQAAADRYGLNRTDMR
Ga0318531_101400601	3300031981	Soil	MTERALPGQVAGALRALSTEIDRLDQAAADRYGLNRTDM
Ga0306922_114842391	3300032001	Soil	MSERVLPARVTGSLRALSTEIDRLDQAAADRYGLNRTDMRALDIV
Ga0306922_115338421	3300032001	Soil	MPEQALPAQVADGLRALSTEIDRLDQAAADRYGLNRTDMRALD
Ga0318569_103777161	3300032010	Soil	MMERPLPGQVVGGLRALSTEIDRLDQAAADRYGLNRT
Ga0318507_101920914	3300032025	Soil	MADRSLAGQVAGRLRALSTEIDRLDQAAADRYGLNRTD
Ga0318507_105232222	3300032025	Soil	MTGRVLPRQVAASLRALSTEIDRLDQAAADRYGLNRTDM
Ga0310911_107886542	3300032035	Soil	MSERVLPARVAGSLRALSTEIDRLDQAAADQYGLNRTDM
Ga0318558_101298651	3300032044	Soil	MADRSLAGQVAGRLRALSTEIDRLDQAAADRYGLNRTDMRALDILG
Ga0318533_103799951	3300032059	Soil	MAQRSLAGEAYAKMRALSTEIDRLDQAAADRFGLNRTDM
Ga0318533_114269612	3300032059	Soil	MVERALPGRVAASLRALSTEIDRLDHAAAERYGLNR
Ga0318505_101093141	3300032060	Soil	MSERVLPARVTGSLRALSTEIDRLDQAAADRYGLNRTDM
Ga0318504_106288031	3300032063	Soil	MMERPLPGQVVGGLRALSTEIDRLDQAAADRYGLNRTDMRALDIVGR
Ga0318513_100551154	3300032065	Soil	MADRSLAGQVAGRLRALSTEIDRLDQAAADRYGLNRTDMRALDI
Ga0318513_105089511	3300032065	Soil	MTGAALPRQVAASLRALSTEIDRLDQVAADRYGLNRTDMRALDIVGQAGPLAPTA
Ga0318524_103163422	3300032067	Soil	MSERALPAQVTGSLRALSTEIDRLDQAAADRYGLNRTDMRALDIISAGGLVE
Ga0318525_105718111	3300032089	Soil	MVERALAGQAAASLRALSTEIDRLDQAAADRYGLNRTDMRALDIISAAG
Ga0318518_107264321	3300032090	Soil	MMERPLPGQVVGGLRALSTEIDRLDQAAADRYGLNRTDMRALDILGRA
Ga0306920_1001096524	3300032261	Soil	MSEWALPAQVTGSLRALSTEIDRLDQAAADQYGLNRTDMRALDLV
Ga0335080_121676402	3300032828	Soil	MTGRVLPRQVAASLRALSTDIDRLDQVAADRYGLNR
Ga0335081_104953981	3300032892	Soil	MTGRVLPRQVAASLRALSTDIDRLDQVAADRYGLNRTDMR
Ga0318519_100108761	3300033290	Soil	MPDRALAGEIAGRLRALSTEIDRLDQAAADQYGLNRTDMRALDIIGQAGPAGP
Ga0318519_103107831	3300033290	Soil	MAERALPGQVAGGLRALSTQIDRLDQAAADRYGLNRTDMRALDILGRAG
Ga0318519_106613841	3300033290	Soil	MSERVLPARVAGSLRALSTEIDRLDQAAADQYGLN
Ga0373950_0006982_1_138	3300034818	Rhizosphere Soil	MTGRVLPREVAASLRALSTEIDRLDQVAADRYGLNRTDMRALDIVG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F050607

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences