Metagenome Family F050616

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F050616
Family Type	Metagenome
Number of Sequences	145
Average Sequence Length	47 residues
Representative Sequence	MDVLRSVRARRARPRGVPGPDAASAALSWIGDERIAISGVPS
Number of Associated Samples	113
Number of Associated Scaffolds	145

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	98.62 %
% of genes near scaffold ends (potentially truncated)	99.31 %
% of genes from short scaffolds (< 2000 bps)	89.66 %
Associated GOLD sequencing projects	105
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.29

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (51.724 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (22.069 % of family members)
Environment Ontology (ENVO)	Unclassified (26.897 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (32.414 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 14.29% β-sheet: 14.29% Coil/Unstructured: 71.43%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.29
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.29
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 145 Family Scaffolds
PF12697	Abhydrolase_6	5.52
PF16169	DUF4872	4.14
PF12146	Hydrolase_4	2.76
PF13561	adh_short_C2	2.07
PF03417	AAT	2.07
PF10604	Polyketide_cyc2	2.07
PF03976	PPK2	1.38
PF00501	AMP-binding	1.38
PF00583	Acetyltransf_1	1.38
PF00903	Glyoxalase	1.38
PF00027	cNMP_binding	1.38
PF00378	ECH_1	1.38
PF09594	GT87	1.38
PF13847	Methyltransf_31	0.69
PF03551	PadR	0.69
PF12802	MarR_2	0.69
PF12680	SnoaL_2	0.69
PF00400	WD40	0.69
PF00491	Arginase	0.69
PF04343	DUF488	0.69
PF00486	Trans_reg_C	0.69
PF04229	GrpB	0.69
PF04493	Endonuclease_5	0.69
PF09900	DUF2127	0.69
PF00005	ABC_tran	0.69
PF00296	Bac_luciferase	0.69
PF00498	FHA	0.69
PF04012	PspA_IM30	0.69
PF01872	RibD_C	0.69
PF02687	FtsX	0.69
PF13160	DUF3995	0.69
PF01969	Ni_insertion	0.69
PF03466	LysR_substrate	0.69
PF01906	YbjQ_1	0.69
PF03061	4HBT	0.69

COG ID	Name	Functional Category	% Frequency in 145 Family Scaffolds
COG4927	Predicted choloylglycine hydrolase	General function prediction only [R]	2.07
COG1842	Phage shock protein A	Transcription [K]	1.38
COG2326	Polyphosphate kinase 2, PPK2 family	Energy production and conversion [C]	1.38
COG0010	Arginase/agmatinase family enzyme	Amino acid transport and metabolism [E]	0.69
COG0262	Dihydrofolate reductase	Coenzyme transport and metabolism [H]	0.69
COG0393	Uncharacterized pentameric protein YbjQ, UPF0145 family	Function unknown [S]	0.69
COG1515	Deoxyinosine 3'-endonuclease (endonuclease V)	Replication, recombination and repair [L]	0.69
COG1641	CTP-dependent cyclometallase, nickel-pincer nucleotide (NPN) cofactor biosynthesis	Coenzyme transport and metabolism [H]	0.69
COG1695	DNA-binding transcriptional regulator, PadR family	Transcription [K]	0.69
COG1733	DNA-binding transcriptional regulator, HxlR family	Transcription [K]	0.69
COG1846	DNA-binding transcriptional regulator, MarR family	Transcription [K]	0.69
COG1985	Pyrimidine reductase, riboflavin biosynthesis	Coenzyme transport and metabolism [H]	0.69
COG2141	Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)	Coenzyme transport and metabolism [H]	0.69
COG2320	GrpB domain, predicted nucleotidyltransferase, UPF0157 family	General function prediction only [R]	0.69
COG3189	Uncharacterized conserved protein YeaO, DUF488 family	Function unknown [S]	0.69

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.72 %
All Organisms	root	All Organisms	48.28 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.72 %
cellular organisms	root	All Organisms → cellular organisms	48.28 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.72 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	48.28 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.72 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	35.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.72 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	32.41 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1.38 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.72 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	22.07 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	2.07 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	1.38 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.72 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	3.45 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	2.76 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	2.07 %
Thermoleophilales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales	2.07 %
Micromonosporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales	1.38 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.38 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.69 %
Chloroflexi bacterium RBG_16_57_11	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium RBG_16_57_11	0.69 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.69 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	0.69 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	0.69 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.72 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3.45 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	2.76 %
Thermoleophilaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae	2.07 %
Treboniaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae	1.38 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	1.38 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.38 %
Kribbellaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae	0.69 %
Micrococcaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae	0.69 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.69 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.69 %
Chloroflexi bacterium RBG_16_57_11	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium RBG_16_57_11	0.69 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.72 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3.45 %
unclassified Thermoleophilaceae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae	2.07 %
Trebonia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia	1.38 %
Actinoplanes	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes	1.38 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.38 %
Arthrobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter	0.69 %
Amycolatopsis	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis	0.69 %
Crossiella	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Crossiella	0.69 %
Kribbella	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella	0.69 %
Streptacidiphilus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptacidiphilus	0.69 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.69 %
Chloroflexi bacterium RBG_16_57_11	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium RBG_16_57_11	0.69 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.72 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3.45 %
Thermoleophilaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium	2.07 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1.38 %
Actinoplanes brasiliensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes → Actinoplanes brasiliensis	1.38 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.38 %
Kribbella speibonae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella → Kribbella speibonae	0.69 %
unclassified Arthrobacter	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter → unclassified Arthrobacter	0.69 %
Amycolatopsis	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis	0.69 %
Crossiella	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Crossiella	0.69 %
Streptacidiphilus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptacidiphilus	0.69 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.69 %
Chloroflexi bacterium RBG_16_57_11	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium RBG_16_57_11	0.69 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.72 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3.45 %
Thermoleophilaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium	2.07 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1.38 %
Actinoplanes brasiliensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes → Actinoplanes brasiliensis	1.38 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.38 %
Arthrobacter sp. ES1	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter → unclassified Arthrobacter → Arthrobacter sp. ES1	0.69 %
Kribbella speibonae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella → Kribbella speibonae	0.69 %
Amycolatopsis	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis	0.69 %
Crossiella	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Crossiella	0.69 %
Streptacidiphilus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptacidiphilus	0.69 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.69 %
Chloroflexi bacterium RBG_16_57_11	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium RBG_16_57_11	0.69 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.69 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000956\|JGI10216J12902_113894666	Not Available	682	Open in IMG/M
3300004092\|Ga0062389_104228897	Not Available	540	Open in IMG/M
3300005332\|Ga0066388_102394823	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	957	Open in IMG/M
3300005332\|Ga0066388_106604100	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium	584	Open in IMG/M
3300005332\|Ga0066388_107943427	Not Available	531	Open in IMG/M
3300005334\|Ga0068869_100376553	Not Available	1162	Open in IMG/M
3300005337\|Ga0070682_100119129	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1769	Open in IMG/M
3300005338\|Ga0068868_100566788	Not Available	1002	Open in IMG/M
3300005355\|Ga0070671_100276244	Not Available	1428	Open in IMG/M
3300005434\|Ga0070709_10589791	Not Available	854	Open in IMG/M
3300005434\|Ga0070709_10983629	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	670	Open in IMG/M
3300005434\|Ga0070709_11423467	Not Available	561	Open in IMG/M
3300005435\|Ga0070714_100739626	Not Available	950	Open in IMG/M
3300005435\|Ga0070714_101562561	Not Available	644	Open in IMG/M
3300005435\|Ga0070714_101831683	Not Available	592	Open in IMG/M
3300005435\|Ga0070714_102038890	Not Available	559	Open in IMG/M
3300005436\|Ga0070713_100763575	Not Available	925	Open in IMG/M
3300005437\|Ga0070710_11036114	Not Available	599	Open in IMG/M
3300005439\|Ga0070711_100569673	Not Available	941	Open in IMG/M
3300005439\|Ga0070711_101556342	Not Available	577	Open in IMG/M
3300005439\|Ga0070711_101851202	Not Available	530	Open in IMG/M
3300005468\|Ga0070707_102047742	Not Available	540	Open in IMG/M
3300005546\|Ga0070696_100230016	Not Available	1395	Open in IMG/M
3300005546\|Ga0070696_100862335	Not Available	749	Open in IMG/M
3300005764\|Ga0066903_103498049	All Organisms → cellular organisms → Bacteria	846	Open in IMG/M
3300005840\|Ga0068870_10161685	Not Available	1328	Open in IMG/M
3300006028\|Ga0070717_10375839	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1274	Open in IMG/M
3300006028\|Ga0070717_12076617	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	511	Open in IMG/M
3300006163\|Ga0070715_10001795	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	6391	Open in IMG/M
3300006173\|Ga0070716_100047755	Not Available	2416	Open in IMG/M
3300006173\|Ga0070716_101546072	Not Available	543	Open in IMG/M
3300006175\|Ga0070712_100202502	Not Available	1560	Open in IMG/M
3300006175\|Ga0070712_100749230	Not Available	836	Open in IMG/M
3300006358\|Ga0068871_101007359	Not Available	776	Open in IMG/M
3300006806\|Ga0079220_10263003	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1041	Open in IMG/M
3300006806\|Ga0079220_10942628	Not Available	676	Open in IMG/M
3300007076\|Ga0075435_101671794	Not Available	559	Open in IMG/M
3300009092\|Ga0105250_10168426	Not Available	916	Open in IMG/M
3300009098\|Ga0105245_10863874	Not Available	945	Open in IMG/M
3300009520\|Ga0116214_1269092	Not Available	649	Open in IMG/M
3300009545\|Ga0105237_12433185	All Organisms → cellular organisms → Bacteria → Terrabacteria group	534	Open in IMG/M
3300009698\|Ga0116216_10073930	All Organisms → cellular organisms → Bacteria	2095	Open in IMG/M
3300009792\|Ga0126374_10035482	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2389	Open in IMG/M
3300010360\|Ga0126372_11316420	Not Available	752	Open in IMG/M
3300010360\|Ga0126372_11869635	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	645	Open in IMG/M
3300010366\|Ga0126379_10236189	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1788	Open in IMG/M
3300010366\|Ga0126379_10243330	All Organisms → cellular organisms → Bacteria	1766	Open in IMG/M
3300010371\|Ga0134125_12707849	Not Available	539	Open in IMG/M
3300010376\|Ga0126381_100712216	Not Available	1436	Open in IMG/M
3300010376\|Ga0126381_102861339	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	688	Open in IMG/M
3300010379\|Ga0136449_101172411	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1213	Open in IMG/M
3300010398\|Ga0126383_11004793	All Organisms → cellular organisms → Bacteria	922	Open in IMG/M
3300012971\|Ga0126369_11081502	Not Available	891	Open in IMG/M
3300013104\|Ga0157370_10624184	Not Available	986	Open in IMG/M
3300013296\|Ga0157374_12114943	Not Available	590	Open in IMG/M
3300014201\|Ga0181537_11059214	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter → unclassified Arthrobacter → Arthrobacter sp. ES1	548	Open in IMG/M
3300015373\|Ga0132257_102154093	Not Available	721	Open in IMG/M
3300016319\|Ga0182033_10344170	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis	1245	Open in IMG/M
3300016319\|Ga0182033_11610735	Not Available	587	Open in IMG/M
3300016371\|Ga0182034_11441229	Not Available	602	Open in IMG/M
3300016404\|Ga0182037_10510378	Not Available	1009	Open in IMG/M
3300017821\|Ga0187812_1073812	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1130	Open in IMG/M
3300017924\|Ga0187820_1308122	All Organisms → cellular organisms → Bacteria	523	Open in IMG/M
3300017926\|Ga0187807_1056166	All Organisms → cellular organisms → Bacteria	1221	Open in IMG/M
3300017928\|Ga0187806_1000756	All Organisms → cellular organisms → Bacteria	8003	Open in IMG/M
3300017939\|Ga0187775_10407949	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	563	Open in IMG/M
3300017943\|Ga0187819_10184381	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1235	Open in IMG/M
3300017948\|Ga0187847_10061689	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptacidiphilus	2111	Open in IMG/M
3300017955\|Ga0187817_10158731	Not Available	1439	Open in IMG/M
3300017961\|Ga0187778_10318933	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1008	Open in IMG/M
3300017975\|Ga0187782_10176232	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1597	Open in IMG/M
3300017995\|Ga0187816_10159800	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	976	Open in IMG/M
3300018042\|Ga0187871_10129864	Not Available	1434	Open in IMG/M
3300018044\|Ga0187890_10763471	Not Available	547	Open in IMG/M
3300018044\|Ga0187890_10883301	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	504	Open in IMG/M
3300018060\|Ga0187765_10158719	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1281	Open in IMG/M
3300018060\|Ga0187765_10485564	All Organisms → cellular organisms → Bacteria	779	Open in IMG/M
3300021474\|Ga0210390_10280340	Not Available	1411	Open in IMG/M
3300021478\|Ga0210402_11023915	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes → Actinoplanes brasiliensis	753	Open in IMG/M
3300021560\|Ga0126371_10161617	All Organisms → cellular organisms → Bacteria	2310	Open in IMG/M
3300024254\|Ga0247661_1040991	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	841	Open in IMG/M
3300025634\|Ga0208589_1075742	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	814	Open in IMG/M
3300025898\|Ga0207692_10827574	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	606	Open in IMG/M
3300025906\|Ga0207699_11449712	Not Available	508	Open in IMG/M
3300025915\|Ga0207693_10017010	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	5806	Open in IMG/M
3300025915\|Ga0207693_10414981	Not Available	1052	Open in IMG/M
3300025915\|Ga0207693_11078526	Not Available	611	Open in IMG/M
3300025915\|Ga0207693_11468792	Not Available	504	Open in IMG/M
3300025928\|Ga0207700_10330347	Not Available	1323	Open in IMG/M
3300025939\|Ga0207665_10009468	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	6396	Open in IMG/M
3300026067\|Ga0207678_11159193	Not Available	684	Open in IMG/M
3300026089\|Ga0207648_12062716	Not Available	531	Open in IMG/M
3300027853\|Ga0209274_10293605	All Organisms → cellular organisms → Bacteria	835	Open in IMG/M
3300028379\|Ga0268266_10805354	Not Available	907	Open in IMG/M
3300028381\|Ga0268264_12670759	Not Available	503	Open in IMG/M
3300028877\|Ga0302235_10058456	Not Available	1831	Open in IMG/M
3300028906\|Ga0308309_10696068	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	883	Open in IMG/M
3300030509\|Ga0302183_10423513	Not Available	509	Open in IMG/M
3300031543\|Ga0318516_10266050	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	991	Open in IMG/M
3300031544\|Ga0318534_10819768	Not Available	522	Open in IMG/M
3300031573\|Ga0310915_11304960	Not Available	500	Open in IMG/M
3300031640\|Ga0318555_10050092	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2115	Open in IMG/M
3300031640\|Ga0318555_10279478	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	903	Open in IMG/M
3300031713\|Ga0318496_10683351	Not Available	566	Open in IMG/M
3300031715\|Ga0307476_10524461	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes → Actinoplanes brasiliensis	878	Open in IMG/M
3300031744\|Ga0306918_10245555	All Organisms → cellular organisms → Bacteria	1365	Open in IMG/M
3300031744\|Ga0306918_10887887	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	695	Open in IMG/M
3300031747\|Ga0318502_10073797	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Crossiella	1846	Open in IMG/M
3300031748\|Ga0318492_10570223	Not Available	603	Open in IMG/M
3300031751\|Ga0318494_10026267	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2938	Open in IMG/M
3300031751\|Ga0318494_10256346	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1004	Open in IMG/M
3300031770\|Ga0318521_10563313	All Organisms → cellular organisms → Bacteria → Terrabacteria group	687	Open in IMG/M
3300031798\|Ga0318523_10098264	All Organisms → cellular organisms → Bacteria	1434	Open in IMG/M
3300031832\|Ga0318499_10014231	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	2659	Open in IMG/M
3300031835\|Ga0318517_10510840	Not Available	541	Open in IMG/M
3300031897\|Ga0318520_10365710	Not Available	877	Open in IMG/M
3300031897\|Ga0318520_11067140	Not Available	511	Open in IMG/M
3300031912\|Ga0306921_11907713	Not Available	635	Open in IMG/M
3300031942\|Ga0310916_11603979	Not Available	528	Open in IMG/M
3300032008\|Ga0318562_10480316	Not Available	721	Open in IMG/M
3300032008\|Ga0318562_10654833	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium RBG_16_57_11	605	Open in IMG/M
3300032008\|Ga0318562_10816547	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	533	Open in IMG/M
3300032025\|Ga0318507_10511166	Not Available	523	Open in IMG/M
3300032063\|Ga0318504_10117213	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1206	Open in IMG/M
3300032063\|Ga0318504_10413618	Not Available	643	Open in IMG/M
3300032065\|Ga0318513_10430736	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium	644	Open in IMG/M
3300032066\|Ga0318514_10515743	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	636	Open in IMG/M
3300032076\|Ga0306924_10363846	All Organisms → cellular organisms → Bacteria	1658	Open in IMG/M
3300032089\|Ga0318525_10184958	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella → Kribbella speibonae	1071	Open in IMG/M
3300032090\|Ga0318518_10371631	Not Available	734	Open in IMG/M
3300032091\|Ga0318577_10013391	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3283	Open in IMG/M
3300032160\|Ga0311301_10180810	All Organisms → cellular organisms → Bacteria	3687	Open in IMG/M
3300032174\|Ga0307470_11906720	Not Available	506	Open in IMG/M
3300032205\|Ga0307472_100408652	Not Available	1138	Open in IMG/M
3300032205\|Ga0307472_102491694	Not Available	526	Open in IMG/M
3300032261\|Ga0306920_103203317	Not Available	612	Open in IMG/M
3300032261\|Ga0306920_103474848	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium	583	Open in IMG/M
3300032770\|Ga0335085_12334896	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	534	Open in IMG/M
3300032828\|Ga0335080_10380836	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1517	Open in IMG/M
3300032896\|Ga0335075_10155270	All Organisms → cellular organisms → Bacteria	2842	Open in IMG/M
3300033290\|Ga0318519_10463742	All Organisms → cellular organisms → Bacteria	760	Open in IMG/M
3300033544\|Ga0316215_1021715	Not Available	655	Open in IMG/M
3300033548\|Ga0316216_1008633	Not Available	775	Open in IMG/M
3300033807\|Ga0314866_064764	All Organisms → cellular organisms → Bacteria	617	Open in IMG/M
3300033808\|Ga0314867_115195	All Organisms → cellular organisms → Bacteria	627	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	87.59%
Host-Associated	Host-Associated	12.41%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	78.62%
Plants	Host-Associated → Plants	12.41%
Aquatic	Environmental → Aquatic	8.97%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	77.24%
Freshwater	Environmental → Aquatic → Freshwater	8.97%
Rhizosphere	Host-Associated → Plants → Rhizosphere	6.21%
Rhizoplane	Host-Associated → Plants → Rhizoplane	4.14%
Roots	Host-Associated → Plants → Roots	2.07%
Peat	Environmental → Terrestrial → Peat	1.38%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	44.83%
Loam	Environmental → Terrestrial → Soil → Loam	25.52%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	8.97%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	6.90%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	4.14%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	3.45%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.07%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	1.38%
Unclassified	Host-Associated → Plants → Roots → Unclassified	1.38%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.69%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.69%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	31.72%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	21.38%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	10.34%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	6.90%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	4.83%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	4.14%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	4.14%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	4.14%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	3.45%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.07%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.38%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	1.38%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	1.38%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.69%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.69%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.69%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.69%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	22.07%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	17.93%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	6.90%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	6.90%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	4.83%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	3.45%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	2.76%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	2.76%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.76%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.76%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	2.76%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	2.76%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	2.07%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.38%
Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland	1.38%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	1.38%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	1.38%
Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Roots	1.38%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.38%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.69%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	0.69%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.69%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	0.69%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.69%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.69%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.69%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.69%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.69%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.69%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.69%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.69%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.69%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.69%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.69%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.69%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005840	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2	Host-Associated	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009092	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009520	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_1_NS metaG	Environmental	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300009698	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300013104	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG	Host-Associated	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300014201	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_10_metaG	Environmental	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300017821	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_2	Environmental	Open in IMG/M
3300017924	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_5	Environmental	Open in IMG/M
3300017926	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_2	Environmental	Open in IMG/M
3300017928	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_1	Environmental	Open in IMG/M
3300017939	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_10_MG	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300017948	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_10	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017961	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MG	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300017995	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_1	Environmental	Open in IMG/M
3300018042	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_10	Environmental	Open in IMG/M
3300018044	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_21_10	Environmental	Open in IMG/M
3300018060	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MG	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300024254	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK02	Environmental	Open in IMG/M
3300025634	Arctic peat soil from Barrow, Alaska - NGEE Surface sample F53-2 shallow-092012 (SPAdes)	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026067	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027853	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1 (SPAdes)	Environmental	Open in IMG/M
3300028379	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028877	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N3_3	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300030509	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_N3_2	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031832	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f25	Environmental	Open in IMG/M
3300031835	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f21	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300032008	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f18	Environmental	Open in IMG/M
3300032025	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f20	Environmental	Open in IMG/M
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental	Open in IMG/M
3300032065	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032089	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f23	Environmental	Open in IMG/M
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300032896	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.4	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M
3300033544	Spruce roots microbial communities from Maridalen valley, Oslo, Norway - NRE5	Host-Associated	Open in IMG/M
3300033548	Spruce roots microbial communities from Maridalen valley, Oslo, Norway - NRE6	Host-Associated	Open in IMG/M
3300033807	Tropical peat soil microbial communities from peatlands in Loreto, Peru - MAQ_100_10	Environmental	Open in IMG/M
3300033808	Tropical peat soil microbial communities from peatlands in Loreto, Peru - MAQ_100_20	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI10216J12902_1138946661	3300000956	Soil	MDLLQGLGVRRPRPRRVPGPDAASAALSWIGDERIAISGVPS
Ga0062389_1042288971	3300004092	Bog Forest Soil	MEVLRSVRAGRTRPRGGPGPDAAGPLLSWIGDERIAISAVPPARTVAGLAGLGV
Ga0066388_1023948232	3300005332	Tropical Forest Soil	MEVLRSVRAGRPRPREAPGPGAAGWALSWIGDERIAISGVPSPRAVAGLAGQGVTHVV
Ga0066388_1066041001	3300005332	Tropical Forest Soil	MEVLRSVRAGRPRPRRAPGTGAGSAALSWIGDERIAISGVPSARAVAGLA
Ga0066388_1079434271	3300005332	Tropical Forest Soil	MEVPRSVRAGRPRRRGAPGPGAAGPALSWIGDERIAISGVPSARAV
Ga0068869_1003765532	3300005334	Miscanthus Rhizosphere	MDLLRGVRARRPRQVPGPDAAGVALSWIGGERIAISGVPSPQGV
Ga0070682_1001191291	3300005337	Corn Rhizosphere	MDLLRGVQARRPRRVPGPDAAGVALSWIGGERIAISGVPSPQGVPHLAEQG
Ga0068868_1005667881	3300005338	Miscanthus Rhizosphere	MDLLRGVRARRPRQVPGPDAAGVALSWIGGERIAISGVPSPQGVPHL
Ga0070671_1002762443	3300005355	Switchgrass Rhizosphere	MDLLRGVQARRPRRVPGPDAAGVALSWIGGERIAISGVPSPQGVPHLAEQGVT
Ga0070709_105897911	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	VGVLRSVRAGQWRSREVPGTAAVGLSLSWIGDERIAVSGVPSAQMVARLAEQGVTHV
Ga0070709_109836291	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MDLLRGVRARRPRQVPGPDAAGVALSWIGGERIAISGVPSPQGVPHLAEQGVT
Ga0070709_114234671	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MDLLRGVRARRPPRVPGPDAAGVALSWIGGERIAISGVPSPQGVPHLAEQGVT
Ga0070714_1007396262	3300005435	Agricultural Soil	VDVLRSMRPGQWRSREVPGTAAVGLSLSWIGDERIAVSGVPSAQMVARLAEQGVTHVV
Ga0070714_1015625611	3300005435	Agricultural Soil	MDLLRGVQARRPRRVPGPDAAGVALSWIGGERIAISGVPSPQGVPHLAEQGV
Ga0070714_1018316831	3300005435	Agricultural Soil	MDVLRSVRARRARPRGVPGPDAASAALSWIGDERIAISGVPSARTVASLAGQGVT
Ga0070714_1020388901	3300005435	Agricultural Soil	MDLLRGVRARRPPRVPGPDAAGVALSWIGGERIAISGVPSPQGVPHLAEQGV
Ga0070713_1007635751	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	VDVLRSMRPGQWRSREVPGTAAVGLSLSWIGDERIAVSGVPSAQMVARLAEQGVTHVVN
Ga0070710_110361141	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	VDLLRSVRVRRPRRVPGPDAADAALSWIGGERIAISGVPSPQGWLSWQ
Ga0070711_1005696732	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	VGVLRSVRAGQWRPREVPGPAAASLSLSWIGDERIAVSGVPSAQMVA
Ga0070711_1015563421	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MDLLRGVQARRPRRVPGPDAVGVALSWIGGERIAISGVPSPQGV
Ga0070711_1018512022	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	VTAEGDMGVLRYVSAGLPRPRGLPGPDAAGAGLSWIGDERIAISGV
Ga0070707_1020477422	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MDVLRSVRARRTRPRVVPGPDAAGAALSWIGDERIAISGV
Ga0070696_1002300163	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	MDLLRGVRARRPRQVPGPDAAGVALSWIGGERIAISGVPSP
Ga0070696_1008623352	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	MDVLRSVRARRARPRVVPGPDAASAALSWIGDERIAISGV
Ga0066903_1034980493	3300005764	Tropical Forest Soil	MEVLRSVRADRLRPREVPGPGAVSPALSWIGDERIAISGVPSARA
Ga0068870_101616852	3300005840	Miscanthus Rhizosphere	MDLLRGVQARRPRRVPGPDAAGVALSWIGGERIAISGVPSPQGV
Ga0070717_103758393	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MDVLRSVRARGHPRGVPGPDAAGPVLSWIGDERIAISAVPPTRMVA
Ga0070717_120766172	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MDLLRGVQARRPRRVPGPDAAGVALSWIGGERIAISGVPSPQGVPHLAE
Ga0070715_100017957	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	MDVLRSVRARRARPRGVPGPDAASAALSWIGDERIAISGVP
Ga0070716_1000477551	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MDVLRSVRARRTRPRGVPGPDAAGAALSWIGDERIAISGVPPARTVACLAGQGVTHV
Ga0070716_1015460721	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MDLLRGVRARRPPRVPGPDAAGVALSWIGGERIAISGVPSPQGVPHLAEQG
Ga0070712_1002025022	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	VGVLRSVRAGQWRPREVAGPAAAGLSLSWIGDERIAVSGVPSAQMVARLAEQGVT
Ga0070712_1007492301	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	VDVLRSMRPGQWRSREVPGTAAVGLSLSWIGDERIAVSGVP
Ga0068871_1010073591	3300006358	Miscanthus Rhizosphere	MDVLRSVRARRARPRVVPGPDAASAALSWIGDERIAISGVPSARTVASLAGQGVTHVV
Ga0079220_102630033	3300006806	Agricultural Soil	VGVLRSVRAGQWRSREVPGTAAVGLSLSWIGDERIAVSGVPSAQMVARLAE
Ga0079220_109426283	3300006806	Agricultural Soil	MDVRRSVRAPWARPRGVPSPDAAGAALSWIGDERIAI
Ga0075435_1016717941	3300007076	Populus Rhizosphere	MDLLRGVRARRPPRVPGPDAAGVALSWIGGERIAISGVPSPQGVPHLAEQGVTHVVN
Ga0105250_101684261	3300009092	Switchgrass Rhizosphere	MDLLRGVQARRPRRVPGPDAAGVALSWIGGERIAISGVPSPQGVPHLAEQGVTHVVN
Ga0105245_108638741	3300009098	Miscanthus Rhizosphere	MDLLRGVQARRPRRVPGPDAAGVALSWIGGERIAISGVPSPQGVPHLAEQGVTH
Ga0116214_12690921	3300009520	Peatlands Soil	MDVLRSVRARWPRPRGVPGPDAAGPALSWIGDERIAISGVPLALMVPCLAEQGVTHV
Ga0105237_124331852	3300009545	Corn Rhizosphere	MDLLRGVRARRPRQVPGPDAAGVALSWIGGERIAISGVPSPQGVPHLA
Ga0116216_100739303	3300009698	Peatlands Soil	MDVLRSVRAGRPGPRGVPGPGAAGPLLSWIGDERIAISGVPSARTVGR
Ga0126374_100354823	3300009792	Tropical Forest Soil	MAVLRSGRAGRPRPRGAPGAGAAGPALSWIGDERVAISGAPSARAVAGLAGQGVTHVV
Ga0126372_113164201	3300010360	Tropical Forest Soil	MDVLRSVRARRARPRGVPGPDAAGPPLSWIGDERIAISGVPSARAVASLAGQGVTHV
Ga0126372_118696351	3300010360	Tropical Forest Soil	MEVPRSVRAGRPRRRGAPGPGAAGPALSWIGDERIAISGVPSARAVA
Ga0126379_102361891	3300010366	Tropical Forest Soil	MDVLRSVRARRARPRGVPGPDAAGPPLSWIGDERIAISGVPSARAVAS
Ga0126379_102433302	3300010366	Tropical Forest Soil	MEVLRSVRAGRPRPREAPGPGAAGPALSWIGDERI
Ga0134125_127078492	3300010371	Terrestrial Soil	MDLLRGVRARRPPRVPGPDAAGVALSWIGGERIAISGVPS
Ga0126381_1007122161	3300010376	Tropical Forest Soil	MGVLRSVRAGLPRPRGVPGPYAAGPALSWIGDERIAISGVP
Ga0126381_1028613391	3300010376	Tropical Forest Soil	MDVPWSLRARGPRPRGKPGPDAASPALTWIGDERIAISGVPSARTV
Ga0136449_1011724111	3300010379	Peatlands Soil	MDVLRSVRAGRRRPRPRGAPGPGAVGPLLSWIGDERIAISGVP
Ga0126383_110047931	3300010398	Tropical Forest Soil	MEVRRSVRAGRPRPRGAPGAGAAGPALSWIGDERIAISGVPSARAVAGLAGQGVTHVVNC
Ga0126369_110815023	3300012971	Tropical Forest Soil	MDLLRGLRVHRPRPRVMPGPDAASAALSWIGSERIAISGVPSPRAVARLAALL
Ga0157370_106241842	3300013104	Corn Rhizosphere	MDLLRGVQARRPRRVPGPDAVGVALSWIGGERIAISGVPSP
Ga0157374_121149432	3300013296	Miscanthus Rhizosphere	MDLLRGVQARRPRRVPGPDAAGVALSWIGGERIAISGVPSPQGVPHL
Ga0181537_110592142	3300014201	Bog	MGVLESLRAGLLRPRVMPGTHAAGPALSWIGDERIAISGVPSARVVAGLAEQGVT
Ga0132257_1021540931	3300015373	Arabidopsis Rhizosphere	MEVLRSVRARWPRPRGAPGPDATGPALSWIGDERIA
Ga0182033_103441703	3300016319	Soil	MDVRRSVRVRRPRPRGPGTGAAGPLLSWIGDERIAISGVPSAQ
Ga0182033_116107351	3300016319	Soil	MEVLRSVRAGRPRPRAAPGPGAAAPVLSWIGDERIAISGVPPARAVP
Ga0182034_114412292	3300016371	Soil	MDLLRGLRVHRPRPRGMPGPDAASAALSWIGSERIAISGVPSPRAVARLAEQ
Ga0182037_105103781	3300016404	Soil	MDVLRSVRARRPRPREVPGPAAASPALSWIGEERIAISG
Ga0187812_10738121	3300017821	Freshwater Sediment	MDVLRSVRVRRPLPREVPGPGAAGPALSWIGDERIAISGV
Ga0187820_13081222	3300017924	Freshwater Sediment	MDVLRSVRAYRPRSRGVPGPDAARPLLTWIGDERIAISGVPSAR
Ga0187807_10561662	3300017926	Freshwater Sediment	MDVLRSVRIRWPRPRGMPGPDAASPAVSWIGDERIAISGVPPARTVACLAEQG
Ga0187806_100075610	3300017928	Freshwater Sediment	MDVLRSVRVRRPLPREVPGPGAAGPALSWIGDERIAISGVPLARMVPC
Ga0187775_104079491	3300017939	Tropical Peatland	MDVLRSVRARRTSPRGVAGPVAAGAALSWIGDERIAISGVPPARAV
Ga0187819_101843811	3300017943	Freshwater Sediment	MDVLRSVRARWLRAVPATDAASPALSWIGDERIAISGVPSAQAV
Ga0187847_100616893	3300017948	Peatland	MEVLRGVRARWPRPRGGPGPDAGGPVLSWIGGERIAISGVPPAWAV
Ga0187817_101587312	3300017955	Freshwater Sediment	MDVLRSVRIRWPRPRGMPGPDAASPAVSWIGDERIAISGVP
Ga0187778_103189331	3300017961	Tropical Peatland	MDVLRSVRAARPRPRGVPAPAAAGPSLSWIGDERIAVSGVPPTQAVASLAEQ
Ga0187782_101762324	3300017975	Tropical Peatland	MDVLRSMRADRPRPRGVPRPDAAGPLLSWIGYERIAISGVPSAR
Ga0187816_101598002	3300017995	Freshwater Sediment	MDVLRSVRARWPRPRGVPGPDAAGPALSWIGDERIAISGVPLARMVPCLAEQGVT
Ga0187871_101298642	3300018042	Peatland	MEVLRGVRWPRPRGAPGPDAAGLSMSWIGDERIAISGVPSAWAVARLAEQG
Ga0187890_107634711	3300018044	Peatland	MEVLRGVRARWPRPRAGPGPDAGGPALSWIGGERIAIS
Ga0187890_108833011	3300018044	Peatland	MEVLGSMRARWPRPRGGSGPDAGGPALSWIGGERIAIS
Ga0187765_101587191	3300018060	Tropical Peatland	MDVLRSVRARRRSPRGVAGPAAAGAALSWIGDERIAISGVP
Ga0187765_104855641	3300018060	Tropical Peatland	MDVLRSLRARRTSPRGVAGPAAADAALSWIGDERIAISGVPSARAVAR
Ga0210390_102803401	3300021474	Soil	MDVLRSVVRACRQRWVPGPDAASPALTWIGNERIAI
Ga0210402_110239152	3300021478	Soil	MGVLGSLGAGLPRPRGVPGPGAAGPKLSWIGDERIAVSGVPSA
Ga0126371_101616173	3300021560	Tropical Forest Soil	VGVLRSVRAGQWRPREVPGPAAAALSLSWIGDERIAVSGVPSAQMVARLAE
Ga0247661_10409911	3300024254	Soil	MDLLRVVRVRRPQPRRVSGPDAASAALSWIGDERIAISGVPSPQAVVHL
Ga0208589_10757422	3300025634	Arctic Peat Soil	MEVLRGVRARWPRPRGRPGPDAAGPALSWIGDERIAISGVPPAWA
Ga0207692_108275741	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	MGVLRSVRAGQRRPREVPDPAAVGPSLSWIGDERIAISGVPSA
Ga0207699_114497121	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	MGVLRSVRAGLPCPRGMPGPYAAGPGLSWIGDERIAVSGVPPARMAAG
Ga0207693_100170101	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MDVLRSVRARRARPRVVPGPDAASAALSWIGDERIAISGVPPARTVACLAGQGVTHV
Ga0207693_104149811	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	VGVLRSVRAGQWRPREVAGPAAAGLSLSWIGDERIAVSGVPSAQMVARLAEQGV
Ga0207693_110785261	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MDVLRSVRARRARPCGVPGPDAASPALSWIGDERIAISGVPPARTVACLAGQGVTHV
Ga0207693_114687921	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	VDVLRSMRPGQWRSREVPGTAAVGLSLSWIGDERIAVS
Ga0207700_103303471	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	VGVLRSVRAGQWRSREVPGTAAVGLSLSWIGDERIAVSGVPSAQMVARLAEQGVTHVV
Ga0207665_100094687	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MDVLRSVRARRARPRVVPGPDAASAALSWIGDERIAISGVPSARTVAS
Ga0207678_111591931	3300026067	Corn Rhizosphere	MDVLRSVRARRARPRVVPGPDAASAALSWIGDERIAISGVP
Ga0207648_120627161	3300026089	Miscanthus Rhizosphere	MDLLRGVQARRPRRVPGPDAVGVALSWIGGERIAISGVPSPQGVAHLAE
Ga0209274_102936051	3300027853	Soil	LRALLLRLVGADAAGPALSWIGDERIAISAVPPVATVAGLAEQGVTHV
Ga0268266_108053542	3300028379	Switchgrass Rhizosphere	MDLLRGVQARRPRRVPGPDAAGVALSWIGGERIAISGVPSPQGVPHLAEQGVTHV
Ga0268264_126707591	3300028381	Switchgrass Rhizosphere	MDVLRSVRARRARPRGVPGPDAASAALSWIGDERIAISGVPS
Ga0302235_100584564	3300028877	Palsa	MEVLRGVRWPRPRGAPGPDAAGLSLSWIGDERIAISGVPSAWAVARL
Ga0308309_106960681	3300028906	Soil	MNVLRNVRAGWSYAHGGPGPDAAAPALSWIGDERIAISGVPSAA
Ga0302183_104235131	3300030509	Palsa	MEVLRGVRVRWPRPRGAPGPDAAGLSLSWIGDERIAISGVPS
Ga0318516_102660501	3300031543	Soil	MEVLRSVRAGRPRPREAPGPGAAGAALSWIGDERIAISGVPSARALAG
Ga0318534_108197681	3300031544	Soil	MEVLRSVRAGRPRPREAPGPGAAGAALSWIGDERIAIS
Ga0310915_113049601	3300031573	Soil	MDVRRSVGVRRPRPGGVPGPSAARPLLSWIGDERIAISGVPPARTV
Ga0318555_100500921	3300031640	Soil	MDVRRSVGVRRPRPGGVPGPSAARPLLSWIGDERIAISGLPPAR
Ga0318555_102794781	3300031640	Soil	MDVLRSVRARRTSPRGVAGPAAAGAALSWIGDERIAISSVPSA
Ga0318496_106833513	3300031713	Soil	MEVLRSVRAGRPRPREAPGPGAAGAALSWIGDERIAISGVP
Ga0307476_105244611	3300031715	Hardwood Forest Soil	MGVLGSLGAGRPRPRGVPVPGAAGQALSWIGDERIAVSGVPSARMVAGLAEQGV
Ga0306918_102455552	3300031744	Soil	MEVLRSVRAGRPRPREAPGPGAAGAALSWIGDERIAISGVPSARAVAGLAGQGVTHVV
Ga0306918_108878873	3300031744	Soil	MDVLRSLRAGGPRLRGMPGPEAASPALTWIGDERIAISGVPSSRTV
Ga0318502_100737971	3300031747	Soil	MDVLRSVRVRRPRPPGMPGPGAAGPLLSWIGDERIA
Ga0318492_105702232	3300031748	Soil	MEVLRSVRAGRPRPREAPGPGAAGAVLSWIGDERIAISGVPSARAPRA
Ga0318494_100262671	3300031751	Soil	MDVRRSVRVRRPRPRGPGTGAAGPMLSWIGDARIAISGVPSAQTVAD
Ga0318494_102563462	3300031751	Soil	MDLLRGLRVHRPRPRGMPGPDAVGAALSWIGSERIAISGVPSPR
Ga0318521_105633131	3300031770	Soil	MDVLRSVRARRTSPRGVAGPAAAGAALSWIGDERIAISSVPSAQAMARLAEQGVTH
Ga0318523_100982641	3300031798	Soil	MEVLRSVRAGRPRPREAPGPGAAGAALSWIGDERIAISGVPSARAPRV
Ga0318499_100142311	3300031832	Soil	MDVLRSVRARRPRPREVPGPAAASPALSWIGEERIAISGVPPARTVAHR
Ga0318517_105108402	3300031835	Soil	MDLLRGLRVHRPRPRGMPGPDAASAALSWIGSERIAISGVPS
Ga0318520_103657101	3300031897	Soil	MDVLRSVRVRRPRPPGMPGPGAAGPLLSWIGDERIAISGVPSARTVA
Ga0318520_110671402	3300031897	Soil	MDVLRSLRARGPRPRGMPGPDAASPALTWIGDERIAISGVPPARTVARLAE
Ga0306921_119077131	3300031912	Soil	MDVLRSVRARRPRPREVPGPAAASPALSWIGEERIAISGVPPARTVARLAEQGVTHVV
Ga0310916_116039792	3300031942	Soil	MDVLRSVRVRRPRPPGMPGPGAAGPLLSWIGDERIAISGVPSARTVAG
Ga0318562_104803162	3300032008	Soil	MEVLRSVRAGRPRPRAAPGPGAAAPVLSWIGDERI
Ga0318562_106548331	3300032008	Soil	MEVLRSVRAGRPRPREAPGPGAAGAALSWIGDERIAISGV
Ga0318562_108165472	3300032008	Soil	MDVLRSLRAGGPRPRGMPGPEAASPALTWIGDERIAISGVP
Ga0318507_105111661	3300032025	Soil	MDVLRSVRARRPRPREVPGPAAASPALSWIGEERIAISGVPPARA
Ga0318504_101172135	3300032063	Soil	MDVLRSVRVRRPRPPGMPGPGAAGPLLSWIGDERIAISGVPSARTVAGLAEQGV
Ga0318504_104136181	3300032063	Soil	MDVLRSVRARRPRPREVPGPAAASPALSWIGEERIAISGVPPARTVARLA
Ga0318513_104307361	3300032065	Soil	MDVRRSVRVRRPRPRGPGTGAAGALLSWIGDERIAISGVPSAQTVADLAEQGVTHVVN
Ga0318514_105157431	3300032066	Soil	MDVLRSLRAGGPRLRGMPGAEAASPALTWIGDERIAVSGVPSSRTVAR
Ga0306924_103638461	3300032076	Soil	MEVLRSVRAGRPRLREAPRPGAASPALSWIGDERIAISGV
Ga0318525_101849583	3300032089	Soil	MEVLRSVRAGRPRPREAPGPGAAGAALSWIGDERI
Ga0318518_103716312	3300032090	Soil	MEVLRSVRAGRPRPRAAPGPGAAAPVLSWIGDERIAISGVPPARAVPGLAGQGVT
Ga0318577_100133914	3300032091	Soil	MDVLRSVRARRPRPREVPGPAAASPALSWIGEERIAISGVPPARTVARLAEQGVTHVVN
Ga0311301_101808101	3300032160	Peatlands Soil	MDVLRSVRAGRPRPRGVPGPGAAGPLLSWIGDERIAISGVPSARTVGRLAE
Ga0307470_119067201	3300032174	Hardwood Forest Soil	MDVLRSVRARRARPRVVPGPDAAGAALSWIGDERIAISGVPPAR
Ga0307472_1004086523	3300032205	Hardwood Forest Soil	MDVLWSVRARRTRPCGVPGPDAASAALSWIGDERIAISGVPPARTV
Ga0307472_1024916941	3300032205	Hardwood Forest Soil	MDVLRSVRARRARPRGVPGPDAASAALSWIGDERIAISGV
Ga0306920_1032033171	3300032261	Soil	MDVLRSVRARRPRPREVPGPAAASPALSWIGEERIAISGVPPARTVARLAE
Ga0306920_1034748482	3300032261	Soil	MDVRRSVRVRRPRPRGPGTGAAGALLSWIGDERIAISGVPSAQTVADLAEQGVTHV
Ga0335085_123348961	3300032770	Soil	MDLLRGVRARRPRRVPGPDAAAAALSWIGGERIAIS
Ga0335080_103808361	3300032828	Soil	MDVLRGVRARWASPRGVAGPAAAGAALSWIGDERIAISGVPSARAVAR
Ga0335075_101552705	3300032896	Soil	MDVLRSVRTGRPRLRPVPGPDAASPLLTWIGDERIAISGVPSALAVACLGDRA
Ga0318519_104637422	3300033290	Soil	MEVLRSVRAGRPRPREAPGPGAAGAVLSWIGDERIAISGVPSA
Ga0316215_10217152	3300033544	Roots	MGVLESLRAGLPRPRVMPGPVAASPVLSWIGDERIAISSVPSARVV
Ga0316216_10086333	3300033548	Roots	MGVLESLRAGLPRPRVMPGPVAASPVLSWIGDERIAI
Ga0314866_064764_435_617	3300033807	Peatland	MTVIPEAGMDVLRSLLAGRPRPRAESGPAAPFTALSWIAGERIAISGVPPAAAVPGLAAH
Ga0314867_115195_3_191	3300033808	Peatland	MTVILEAGMDVLRSLLAGRPRPRAESGPAAPFTALSWIAGERIAISGVPPAAAVPGLAGHGVT

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F050616

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences