Metagenome Family F050622

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F050622
Family Type	Metagenome
Number of Sequences	145
Average Sequence Length	43 residues
Representative Sequence	RNNLIIDLESFEENVNKLTNYCYDEKNFKVPIMEAIVRVLGK
Number of Associated Samples	85
Number of Associated Scaffolds	145

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	95.17 %
% of genes from short scaffolds (< 2000 bps)	93.10 %
Associated GOLD sequencing projects	78
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.60

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (69.655 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (29.655 % of family members)
Environment Ontology (ENVO)	Unclassified (44.138 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (66.207 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 40.00% β-sheet: 0.00% Coil/Unstructured: 60.00%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.60
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.60
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 145 Family Scaffolds
PF02586	SRAP	2.07
PF06411	HdeA	1.38
PF00589	Phage_integrase	1.38
PF00216	Bac_DNA_binding	1.38
PF00106	adh_short	0.69
PF00873	ACR_tran	0.69
PF00816	Histone_HNS	0.69
PF04860	Phage_portal	0.69
PF13586	DDE_Tnp_1_2	0.69
PF04226	Transgly_assoc	0.69
PF02371	Transposase_20	0.69
PF06078	DUF937	0.69
PF01565	FAD_binding_4	0.69
PF08924	DUF1906	0.69
PF00593	TonB_dep_Rec	0.69
PF13358	DDE_3	0.69
PF13683	rve_3	0.69
PF12840	HTH_20	0.69
PF02518	HATPase_c	0.69
PF13676	TIR_2	0.69
PF07813	LTXXQ	0.69
PF01068	DNA_ligase_A_M	0.69
PF03080	Neprosin	0.69
PF01527	HTH_Tnp_1	0.69

COG ID	Name	Functional Category	% Frequency in 145 Family Scaffolds
COG3678	Periplasmic chaperone Spy, Spy/CpxP family	Posttranslational modification, protein turnover, chaperones [O]	2.76
COG2135	ssDNA abasic site-binding protein YedK/HMCES, SRAP family	Replication, recombination and repair [L]	2.07
COG0776	Bacterial nucleoid DNA-binding protein IHF-alpha	Replication, recombination and repair [L]	1.38
COG1423	ATP-dependent RNA circularization protein, DNA/RNA ligase (PAB1020) family	Replication, recombination and repair [L]	0.69
COG1793	ATP-dependent DNA ligase	Replication, recombination and repair [L]	0.69
COG2261	Uncharacterized membrane protein YeaQ/YmgE, transglycosylase-associated protein family	General function prediction only [R]	0.69
COG2916	DNA-binding protein H-NS	Transcription [K]	0.69
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.69
COG3753	Uncharacterized conserved protein YidB, DUF937 family	Function unknown [S]	0.69

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	69.66 %
Unclassified	root	N/A	30.34 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	69.66 %
Unclassified	root	N/A	30.34 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	69.66 %
Unclassified	root	N/A	30.34 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	62.07 %
Unclassified	root	N/A	30.34 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	1.38 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.69 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.69 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	59.31 %
Unclassified	root	N/A	30.34 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	1.38 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1.38 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.69 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.69 %

Name	Rank	Taxonomy	Distribution
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	47.59 %
Unclassified	root	N/A	30.34 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	6.90 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.38 %
Nitrosomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales	1.38 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	0.69 %
Phycisphaerae	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae	0.69 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.69 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	44.83 %
Unclassified	root	N/A	30.34 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	4.14 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	2.76 %
Nitrosomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Nitrosomonadaceae	1.38 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.38 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.69 %
Phycisphaerales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → Phycisphaerales	0.69 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.69 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	44.83 %
Unclassified	root	N/A	30.34 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2.76 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	2.76 %
Nitrosospira	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Nitrosomonadaceae → Nitrosospira	1.38 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.38 %
Afipia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia	0.69 %
unclassified Phycisphaerales	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → Phycisphaerales → unclassified Phycisphaerales	0.69 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.69 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.69 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	44.83 %
Unclassified	root	N/A	30.34 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	2.76 %
Bradyrhizobium pachyrhizi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium pachyrhizi	1.38 %
unclassified Nitrosospira	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Nitrosomonadaceae → Nitrosospira → unclassified Nitrosospira	1.38 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.38 %
Phycisphaerales bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → Phycisphaerales → unclassified Phycisphaerales → Phycisphaerales bacterium	0.69 %
Bradyrhizobium jicamae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium jicamae	0.69 %
Afipia birgiae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia → Afipia birgiae	0.69 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.69 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.69 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	44.83 %
Unclassified	root	N/A	30.34 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	2.76 %
Nitrosospira sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Nitrosomonadaceae → Nitrosospira → unclassified Nitrosospira → Nitrosospira sp.	1.38 %
Bradyrhizobium pachyrhizi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium pachyrhizi	1.38 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.38 %
Phycisphaerales bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → Phycisphaerales → unclassified Phycisphaerales → Phycisphaerales bacterium	0.69 %
Bradyrhizobium jicamae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium jicamae	0.69 %
Afipia birgiae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia → Afipia birgiae	0.69 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.69 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.69 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000655\|AF_2010_repII_A100DRAFT_1060634	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	670	Open in IMG/M
3300000793\|AF_2010_repII_A001DRAFT_10072776	Not Available	741	Open in IMG/M
3300004633\|Ga0066395_10232941	Not Available	980	Open in IMG/M
3300004633\|Ga0066395_10556556	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	667	Open in IMG/M
3300005332\|Ga0066388_101947036	Not Available	1051	Open in IMG/M
3300005332\|Ga0066388_102584913	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	924	Open in IMG/M
3300005332\|Ga0066388_105232266	Not Available	658	Open in IMG/M
3300005332\|Ga0066388_105658146	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	632	Open in IMG/M
3300005332\|Ga0066388_105801039	Not Available	624	Open in IMG/M
3300005332\|Ga0066388_106200777	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	603	Open in IMG/M
3300005332\|Ga0066388_107520424	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	546	Open in IMG/M
3300005536\|Ga0070697_101426068	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	618	Open in IMG/M
3300005713\|Ga0066905_100558231	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	962	Open in IMG/M
3300005713\|Ga0066905_101422118	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	628	Open in IMG/M
3300005764\|Ga0066903_100773893	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1710	Open in IMG/M
3300005764\|Ga0066903_102053154	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1099	Open in IMG/M
3300005764\|Ga0066903_102084622	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium pachyrhizi	1091	Open in IMG/M
3300005764\|Ga0066903_102828352	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	941	Open in IMG/M
3300005764\|Ga0066903_103711793	Not Available	821	Open in IMG/M
3300005764\|Ga0066903_103765701	Not Available	815	Open in IMG/M
3300005764\|Ga0066903_104537130	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	740	Open in IMG/M
3300005764\|Ga0066903_105505734	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	667	Open in IMG/M
3300005764\|Ga0066903_105802985	Not Available	648	Open in IMG/M
3300005764\|Ga0066903_107276127	Not Available	572	Open in IMG/M
3300005764\|Ga0066903_107417334	Not Available	566	Open in IMG/M
3300005764\|Ga0066903_108206873	Not Available	534	Open in IMG/M
3300005764\|Ga0066903_108830417	Not Available	511	Open in IMG/M
3300006028\|Ga0070717_10340918	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1338	Open in IMG/M
3300006028\|Ga0070717_11398462	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	635	Open in IMG/M
3300006173\|Ga0070716_100002977	All Organisms → cellular organisms → Bacteria → Proteobacteria	7898	Open in IMG/M
3300006852\|Ga0075433_11817010	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia → Afipia birgiae	524	Open in IMG/M
3300009162\|Ga0075423_10188591	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	2164	Open in IMG/M
3300009162\|Ga0075423_12779219	Not Available	536	Open in IMG/M
3300009792\|Ga0126374_10536305	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	851	Open in IMG/M
3300009792\|Ga0126374_10899757	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	686	Open in IMG/M
3300010046\|Ga0126384_10236499	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1468	Open in IMG/M
3300010046\|Ga0126384_10622707	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	947	Open in IMG/M
3300010046\|Ga0126384_12215979	Not Available	529	Open in IMG/M
3300010047\|Ga0126382_10207955	All Organisms → cellular organisms → Bacteria → Proteobacteria	1398	Open in IMG/M
3300010047\|Ga0126382_10549801	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	939	Open in IMG/M
3300010048\|Ga0126373_10591220	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1161	Open in IMG/M
3300010360\|Ga0126372_11944741	Not Available	634	Open in IMG/M
3300010360\|Ga0126372_12512028	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	566	Open in IMG/M
3300010362\|Ga0126377_12804634	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	562	Open in IMG/M
3300010366\|Ga0126379_11026628	Not Available	930	Open in IMG/M
3300010366\|Ga0126379_12639522	Not Available	600	Open in IMG/M
3300010366\|Ga0126379_12873754	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	576	Open in IMG/M
3300010366\|Ga0126379_13648518	Not Available	516	Open in IMG/M
3300010376\|Ga0126381_100869392	All Organisms → cellular organisms → Bacteria	1297	Open in IMG/M
3300010376\|Ga0126381_103645017	Not Available	603	Open in IMG/M
3300010396\|Ga0134126_12646994	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	545	Open in IMG/M
3300010398\|Ga0126383_11259047	Not Available	830	Open in IMG/M
3300010398\|Ga0126383_11441824	Not Available	778	Open in IMG/M
3300010398\|Ga0126383_12708938	Not Available	578	Open in IMG/M
3300010398\|Ga0126383_12855005	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	564	Open in IMG/M
3300010398\|Ga0126383_13432411	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	517	Open in IMG/M
3300010398\|Ga0126383_13594211	Not Available	506	Open in IMG/M
3300011269\|Ga0137392_11203325	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	616	Open in IMG/M
3300012211\|Ga0137377_11741740	Not Available	544	Open in IMG/M
3300012360\|Ga0137375_10966920	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	672	Open in IMG/M
3300012971\|Ga0126369_11501770	Not Available	763	Open in IMG/M
3300012971\|Ga0126369_13020233	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	551	Open in IMG/M
3300012985\|Ga0164308_10740695	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	851	Open in IMG/M
3300012987\|Ga0164307_11204000	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	628	Open in IMG/M
3300015371\|Ga0132258_10514397	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2996	Open in IMG/M
3300016270\|Ga0182036_11170673	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	638	Open in IMG/M
3300016270\|Ga0182036_11624609	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	545	Open in IMG/M
3300016294\|Ga0182041_10915186	Not Available	789	Open in IMG/M
3300016294\|Ga0182041_12313088	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium jicamae	503	Open in IMG/M
3300016319\|Ga0182033_11501318	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	608	Open in IMG/M
3300016357\|Ga0182032_10971735	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	724	Open in IMG/M
3300016371\|Ga0182034_10532518	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	984	Open in IMG/M
3300016371\|Ga0182034_11523250	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	586	Open in IMG/M
3300016387\|Ga0182040_10163507	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1600	Open in IMG/M
3300016387\|Ga0182040_11207870	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	636	Open in IMG/M
3300016387\|Ga0182040_11376181	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	597	Open in IMG/M
3300016404\|Ga0182037_10433583	All Organisms → cellular organisms → Bacteria	1089	Open in IMG/M
3300016404\|Ga0182037_10523540	Not Available	997	Open in IMG/M
3300016422\|Ga0182039_12168696	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	512	Open in IMG/M
3300016445\|Ga0182038_10680302	Not Available	894	Open in IMG/M
3300020579\|Ga0210407_10550506	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	901	Open in IMG/M
3300020580\|Ga0210403_10239913	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1487	Open in IMG/M
3300021082\|Ga0210380_10055452	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1715	Open in IMG/M
3300021170\|Ga0210400_10268072	All Organisms → cellular organisms → Bacteria	1399	Open in IMG/M
3300021178\|Ga0210408_10340448	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1196	Open in IMG/M
3300021372\|Ga0213877_10096881	Not Available	893	Open in IMG/M
3300021406\|Ga0210386_11200058	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	642	Open in IMG/M
3300021478\|Ga0210402_10214713	Not Available	1770	Open in IMG/M
3300021478\|Ga0210402_11114431	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	716	Open in IMG/M
3300021479\|Ga0210410_11566170	Not Available	552	Open in IMG/M
3300021560\|Ga0126371_10061537	All Organisms → cellular organisms → Bacteria	3624	Open in IMG/M
3300021560\|Ga0126371_13892021	Not Available	503	Open in IMG/M
3300025898\|Ga0207692_10272755	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1021	Open in IMG/M
3300027874\|Ga0209465_10248867	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	889	Open in IMG/M
3300027874\|Ga0209465_10382250	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	705	Open in IMG/M
3300028880\|Ga0307300_10302582	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	542	Open in IMG/M
3300031543\|Ga0318516_10445758	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	744	Open in IMG/M
3300031546\|Ga0318538_10578026	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	609	Open in IMG/M
3300031573\|Ga0310915_10162175	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1550	Open in IMG/M
3300031573\|Ga0310915_10983006	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	589	Open in IMG/M
3300031679\|Ga0318561_10484937	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	681	Open in IMG/M
3300031680\|Ga0318574_10886433	Not Available	522	Open in IMG/M
3300031681\|Ga0318572_10575157	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	671	Open in IMG/M
3300031682\|Ga0318560_10276276	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	904	Open in IMG/M
3300031719\|Ga0306917_11431788	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	533	Open in IMG/M
3300031719\|Ga0306917_11447414	Not Available	529	Open in IMG/M
3300031724\|Ga0318500_10196726	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	964	Open in IMG/M
3300031765\|Ga0318554_10571922	Not Available	638	Open in IMG/M
3300031768\|Ga0318509_10231064	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1031	Open in IMG/M
3300031793\|Ga0318548_10407539	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	666	Open in IMG/M
3300031795\|Ga0318557_10520832	Not Available	546	Open in IMG/M
3300031797\|Ga0318550_10089293	All Organisms → cellular organisms → Bacteria	1441	Open in IMG/M
3300031833\|Ga0310917_10057508	Not Available	2405	Open in IMG/M
3300031835\|Ga0318517_10500969	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	547	Open in IMG/M
3300031879\|Ga0306919_10652067	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	811	Open in IMG/M
3300031879\|Ga0306919_10909387	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	674	Open in IMG/M
3300031880\|Ga0318544_10187930	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	796	Open in IMG/M
3300031880\|Ga0318544_10413951	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	524	Open in IMG/M
3300031897\|Ga0318520_10164117	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Nitrosomonadaceae → Nitrosospira → unclassified Nitrosospira → Nitrosospira sp.	1295	Open in IMG/M
3300031910\|Ga0306923_10103872	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3209	Open in IMG/M
3300031910\|Ga0306923_11007350	Not Available	904	Open in IMG/M
3300031912\|Ga0306921_10237673	All Organisms → cellular organisms → Bacteria	2134	Open in IMG/M
3300031912\|Ga0306921_10467497	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1468	Open in IMG/M
3300031912\|Ga0306921_11462835	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	748	Open in IMG/M
3300031912\|Ga0306921_12432606	Not Available	545	Open in IMG/M
3300031941\|Ga0310912_11415026	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	525	Open in IMG/M
3300031942\|Ga0310916_10383525	Not Available	1195	Open in IMG/M
3300031942\|Ga0310916_10468357	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1073	Open in IMG/M
3300031946\|Ga0310910_10198920	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1554	Open in IMG/M
3300031946\|Ga0310910_10419064	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium pachyrhizi	1061	Open in IMG/M
3300031947\|Ga0310909_10268302	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Nitrosomonadaceae → Nitrosospira → unclassified Nitrosospira → Nitrosospira sp.	1427	Open in IMG/M
3300031947\|Ga0310909_11340844	Not Available	574	Open in IMG/M
3300031954\|Ga0306926_10343006	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1847	Open in IMG/M
3300031954\|Ga0306926_11450741	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	794	Open in IMG/M
3300031981\|Ga0318531_10004758	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4728	Open in IMG/M
3300032001\|Ga0306922_10222312	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → Phycisphaerales → unclassified Phycisphaerales → Phycisphaerales bacterium	2027	Open in IMG/M
3300032001\|Ga0306922_10622999	Not Available	1141	Open in IMG/M
3300032035\|Ga0310911_10533168	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	681	Open in IMG/M
3300032063\|Ga0318504_10142062	Not Available	1101	Open in IMG/M
3300032065\|Ga0318513_10630392	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	525	Open in IMG/M
3300032066\|Ga0318514_10453800	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	681	Open in IMG/M
3300032094\|Ga0318540_10559200	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	551	Open in IMG/M
3300033289\|Ga0310914_10112213	All Organisms → cellular organisms → Bacteria	2361	Open in IMG/M
3300033290\|Ga0318519_10480354	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	747	Open in IMG/M
3300033290\|Ga0318519_10705099	Not Available	617	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	97.24%
Host-Associated	Host-Associated	2.76%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	96.55%
Plants	Host-Associated → Plants	2.76%
Aquatic	Environmental → Aquatic	0.69%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	96.55%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.07%
Freshwater	Environmental → Aquatic → Freshwater	0.69%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.69%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	75.17%
Loam	Environmental → Terrestrial → Soil → Loam	21.38%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.07%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.69%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.69%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	51.03%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	24.14%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	17.93%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.45%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.07%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.69%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.69%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	29.66%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	20.00%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	18.62%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	17.93%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.45%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.07%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	2.07%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.07%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.38%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.69%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.69%
Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Bulk Soil	0.69%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.69%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000655	Forest soil microbial communities from Amazon forest - 2010 replicate II A100	Environmental	Open in IMG/M
3300000793	Forest soil microbial communities from Amazon forest - 2010 replicate II A001	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300021082	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_coex redo	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021372	Vellozia epidendroides bulk soil microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - BS_R01	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300028880	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_181	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031795	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f19	Environmental	Open in IMG/M
3300031797	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031835	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f21	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031880	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f25	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031981	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental	Open in IMG/M
3300032065	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032094	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
AF_2010_repII_A100DRAFT_10606341	3300000655	Forest Soil	LNIDLESFEENVNKLTNYCYDEKNFKVPIIEAIVRVLGK*
AF_2010_repII_A001DRAFT_100727762	3300000793	Forest Soil	AKTSNLNIALESFEENVNKLNNYCYDEKNFKVPIMEAIVRVLGK*
Ga0066395_102329412	3300004633	Tropical Forest Soil	ANLNIALESFEENVNKLNNYCYDEKNFKVPIMEAIVKVLGK*
Ga0066395_105565561	3300004633	Tropical Forest Soil	KIIDLDTFEDNVSKVQSYCYEEKNFKVPIMKAVETVLGGRK*
Ga0066388_1019470363	3300005332	Tropical Forest Soil	VAAVQRTNLVIALESFEENVNKLTNYCYDEKNFKMPIMEAIVRVLGK*
Ga0066388_1025849131	3300005332	Tropical Forest Soil	SGYYHAKRNNWIIDTESFENNVNKLNNYYDEKNFKVPIMEAIERVLGK*
Ga0066388_1052322662	3300005332	Tropical Forest Soil	LIATWLSGYSHSKRDNLIIALESFEENVNKLNNYCYDEKNFKVPIMEAIVRIVGK*
Ga0066388_1056581461	3300005332	Tropical Forest Soil	NLIIDLESFEENVNKLTNYCYDEKNFKVPIMEAIERIVGK*
Ga0066388_1058010392	3300005332	Tropical Forest Soil	NLNIALESFEENVNKLNNYCYDEKNFKVPIMEAIVRVLGK*
Ga0066388_1062007772	3300005332	Tropical Forest Soil	ATFLSGYSHAKRTNLTIDLESFEENVNKLTTYCYDEKNFKLPIMEAIVRVLGK*
Ga0066388_1075204242	3300005332	Tropical Forest Soil	WIINVESFEDNVSKLTNYCYDEKNFKVPLMEAIERVLGN*
Ga0070697_1014260682	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	LIIDLESFEENVNKLNNYCYDEKNFKVPIMEAIERIVGK*
Ga0066905_1005582313	3300005713	Tropical Forest Soil	MPKRNNWIIDLESFEDNVSKLTNYCYDEKNFKVPIVEAVETVLGK*
Ga0066905_1014221181	3300005713	Tropical Forest Soil	LESFENNVNKLNNYCYDEKNFKVPIMEAVERILGK*
Ga0066903_1007738934	3300005764	Tropical Forest Soil	MGFGISGYYHAKRNKTIIDLDTFEDNVSKVRNYCYDEKNFKVPIMEAIERVLGK*
Ga0066903_1020531541	3300005764	Tropical Forest Soil	WFIDLESFEDNVSKLTNYCYDEKNFKVPIVEAVETVLGK*
Ga0066903_1020846221	3300005764	Tropical Forest Soil	LESFEENVNKLTNYCYDEKNFKVPIMEAIERIVGK*
Ga0066903_1028283523	3300005764	Tropical Forest Soil	NAKRNNKIIDLDTFEDNVSKVQSYCYEEKNFKVPIMKAVETVLGKSSNAR*
Ga0066903_1037117933	3300005764	Tropical Forest Soil	LESFEENVNKLNNYCYDEKNFKVPIMEAIVRVLGK*
Ga0066903_1037657011	3300005764	Tropical Forest Soil	TIDLESFEENVNKLTTYCYDEKNFKVPIMEAIVRIVGK*
Ga0066903_1045371303	3300005764	Tropical Forest Soil	AWLSGYHHAKRNNWIIALESFEDTVSKLTNYCYDEKNFKVPIMKAVERVLGK*
Ga0066903_1055057342	3300005764	Tropical Forest Soil	WLSGYYHAKRNNWIIGSESFENNVNKLNNYCYDEKNFKVPIIEAIERVLGK*
Ga0066903_1058029851	3300005764	Tropical Forest Soil	IDLESFEENVHKLTTLCYDEKNFKVPIMEAIVRVVGK*
Ga0066903_1072761273	3300005764	Tropical Forest Soil	RWLIAAWLSGYSHAKSTNLTIDLESFEENVHKLTTLCYDEKNFKVPIMEAIVRVVGK*
Ga0066903_1074173341	3300005764	Tropical Forest Soil	NLIIDLESFEENVNKLTNYCYDEKNFKVPIMEAIVRVVGK*
Ga0066903_1082068731	3300005764	Tropical Forest Soil	KSTNLNIDLESFEENVHKLTTLCYDEKNFKVPLMEAIVRVVGK*
Ga0066903_1088304171	3300005764	Tropical Forest Soil	AKRNNSIIDLESFENNVNKLNNYCYDEKNFKVPIMEAIERVLK*
Ga0070717_103409181	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	NKRNNLIIDLESFEENVNKLNNYCYDEKNFKVPIMEAIERIVGK*
Ga0070717_113984621	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	IIQTESFEDNVNKLNNYCYDEKNFKVPIMEAIERVLGK*
Ga0070716_10000297711	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	HAKRNNWIIQTESFEDNVNKLNNYCYDEKNFKVLIMDAIERVLGK*
Ga0075433_118170102	3300006852	Populus Rhizosphere	IIQTESFEDNVNKLNNYCYDEKNFKAPIMEAIERVLGK*
Ga0075423_101885914	3300009162	Populus Rhizosphere	MNPNLPDGLLESFEENVNKLNNYCYDEKNFKVPIMEAIVRVVGK*
Ga0075423_127792191	3300009162	Populus Rhizosphere	GFYHGKRNNWIINVESFEDNVTKLTNYCYDEKNFNVPLTEAIERVLGK*
Ga0126374_105363053	3300009792	Tropical Forest Soil	DLESFEENVNKLTNYCYDEKNFKVPIMEAIVRVVGK*
Ga0126374_108997571	3300009792	Tropical Forest Soil	NTFEDSVSKVQSYCYEEKNFKVPIMKAVETVLGGRK*
Ga0126384_102364994	3300010046	Tropical Forest Soil	ESFENNVNKLNNYCYDEKNFKVPIMEAVERVLGK*
Ga0126384_106227071	3300010046	Tropical Forest Soil	NNLIIDLESFEENVNKLNNYCYDEKNFKTPIMEAIVRVVGK*
Ga0126384_122159792	3300010046	Tropical Forest Soil	IALESFEENVNKLTNYCYDEKNFKVPIMEAIVKVLGK*
Ga0126382_102079551	3300010047	Tropical Forest Soil	NWLSGYYHAKRNNWIIDSESFENNVNKLNNYCYDETNFKVPIMEAIERVLGK*
Ga0126382_105498013	3300010047	Tropical Forest Soil	SGYYHAKRNNWIIDLESFEDNVSKLTNYCYDEKNFKVPIVEAVETVLGK*
Ga0126373_105912201	3300010048	Tropical Forest Soil	HAKRNNWIIALESFEDTVSKLTNYCYDEKNFKVPIMKAVERVLGK*
Ga0126372_119447412	3300010360	Tropical Forest Soil	LSGYSHAKSNNLIIALESFEENVNKLNNYCYDEKNFKTPIMEAIVRVVGK*
Ga0126372_125120282	3300010360	Tropical Forest Soil	NNLIIDLESFEENVNKLTNYCYDEKNFKVPIMEAIERIVGK*
Ga0126377_128046341	3300010362	Tropical Forest Soil	WIIQTESFEDNVNKLNNYCYDEKNFKVPIMEAIERVLGK*
Ga0126379_110266281	3300010366	Tropical Forest Soil	TANLNIALESFEENVNKLNNYCYDEKNFKVPIMEAIVRVLGK*
Ga0126379_126395223	3300010366	Tropical Forest Soil	SHAKTANLNIALESFEENVNKLNNYCYDEKNFKVPIMEAIVKVLGK*
Ga0126379_128737541	3300010366	Tropical Forest Soil	IVDSESFENNVNKLNNYCYDEKNFKVPITEAVERVLGK*
Ga0126379_136485181	3300010366	Tropical Forest Soil	NNRIVDSESFENNVNKLNNYCYDEKNFKVPIMEALGRVLGK*
Ga0126381_1008693923	3300010376	Tropical Forest Soil	LSGYYHAKRNNWIVDSESFENNVNKLNNYCYDEKNFKVPIIEAIERVLGK*
Ga0126381_1036450171	3300010376	Tropical Forest Soil	NLIIALESFEENVNKLNNYCYDEKNFKTPIMEAIVRVVGK*
Ga0134126_126469943	3300010396	Terrestrial Soil	IDSESFENNVNKLNNYCYDEKNFKVPIMDAIERVLGK*
Ga0126383_112590471	3300010398	Tropical Forest Soil	IDTESFENNVNKLNNYCYDEKNFKVPIMEAVERVLGK*
Ga0126383_114418243	3300010398	Tropical Forest Soil	GYYHAKRNNWIINLESFEDNVNKLTNYCYDEKNFEVPLMEAIERVLGK*
Ga0126383_127089382	3300010398	Tropical Forest Soil	WLIATFLSGYSHAKRTNLIIDLESFEENVNKLNNYCYDEKNFKVPIMEAIVKVVGK*
Ga0126383_128550052	3300010398	Tropical Forest Soil	WLSGYYHAKRNNWIIDSESFENNVNKLNNYCYDEKNFKVPIMEAVERVLGK*
Ga0126383_134324112	3300010398	Tropical Forest Soil	YYHAKRNNKIIDLDTLEDNVSKLTNYCYDEKNFKVPIMEAVERVLGK*
Ga0126383_135942111	3300010398	Tropical Forest Soil	LESFEENVHKLTTLCYDEKNFKVPIMEAIVRVVGK*
Ga0137392_112033252	3300011269	Vadose Zone Soil	WLIAAWLSGYSHNKRNNLIIDLSSFEENVNKLNNYCYDEKNFKVPIMEAIERIVGK*
Ga0137377_117417401	3300012211	Vadose Zone Soil	NNVNKLNNYCYDENNFKVPIIEAIERVLGKSSSTR*
Ga0137375_109669202	3300012360	Vadose Zone Soil	IIDLETLEGNVSKVKNYCYDEKNFKVPIMKAVERVLGK*
Ga0126369_115017703	3300012971	Tropical Forest Soil	ALESFEENVNKLNNYCYDEKNFKVPIMEAIVRVLGK*
Ga0126369_130202331	3300012971	Tropical Forest Soil	WIIDSESFENNVNKLNNYCYDEKNFKVPIMEAIERVLGK*
Ga0164308_107406951	3300012985	Soil	RNNWIVDSESFENNVNKLNNYCYDEKNFKVPIIEAVERVLGK*
Ga0164307_112040001	3300012987	Soil	IDLESFEDNVSKLTNYCYDEKNFKVPIMEAVGQVLGGRK*
Ga0132258_105143971	3300015371	Arabidopsis Rhizosphere	AAWLSGYSHAKSNNLIIDLESFEENVNKLNNYCYDEKNFKTPIMEAIVRVVGK*
Ga0182036_111706731	3300016270	Soil	KIIDLETLEDNVSKVTNYCYDEKNFKVPIMKAIETVLGKSSNTR
Ga0182036_116246092	3300016270	Soil	IIDLESFEENVNKLNNYCYDEKNFKVPIMEAIVRIVGK
Ga0182041_109151861	3300016294	Soil	HAKSNNLIIALESFEENVNKLTNYCYDEKNFKVPIMEAIVKVLGK
Ga0182041_123130881	3300016294	Soil	SHNKRNNLIIDLESFEENVNKLTNYCYDEKNFKVPIMEAIERIVGK
Ga0182033_115013181	3300016319	Soil	ALESFEENVNKLNNYCYDEKNFKVPIMAAIERIVGK
Ga0182032_109717351	3300016357	Soil	NLIIDLESFEENVNKLNNYCYDEKNFKVPIMEAIVRIVGK
Ga0182034_105325181	3300016371	Soil	NLIIDLESFEENVNKLTNYCYDEKNFKVPIMEAIERIVGK
Ga0182034_115232501	3300016371	Soil	ENLIIDLESFEENVNKLNNYCYDEKNFKVPIMEAIVRIVGK
Ga0182040_101635071	3300016387	Soil	NAKRNNKIIDLETLEDNVSKVTNYCYDEKNFKVPIMKAIETVLGKSSNTR
Ga0182040_112078702	3300016387	Soil	LESFENNVNKLNNYCYDEKNFKVPIMEAVERVLGK
Ga0182040_113761811	3300016387	Soil	IMDTESFENNVNKLNNYCYDEKNFKVPIMEAVERVLGK
Ga0182037_104335831	3300016404	Soil	NNSIVDLESFENNVNKLNNYCYDEKNFKVPIMEAVERVLGK
Ga0182037_105235403	3300016404	Soil	GYSHAKSNNLIIDLESFEENVNKLTNYCYDEKNFKVPIMEAIVRVVGK
Ga0182039_121686961	3300016422	Soil	WLSGYSHAKSNNLIIDLESFEENVNKLTNYCYDEKNFKTPIMEAIVRVVGK
Ga0182038_106803021	3300016445	Soil	KSNNLIIALESFEENVNKLTNYCYDEKNFKVPIMEAIVKVLGK
Ga0210407_105505062	3300020579	Soil	NWTIQTESFEDNVNKLTNYCYDEKNFKVPIMEAIERVLGK
Ga0210403_102399132	3300020580	Soil	MPNANNWTIQTESFEDNVNKLTNYCYDEKNFKVPIMEAIERVLGK
Ga0210380_100554521	3300021082	Groundwater Sediment	INLESFEDNVNKLNNYCYDEKNFKVPIMEAIERVLGK
Ga0210400_102680724	3300021170	Soil	LSGYSHNKRNNLIIALESFEENVNKLTNYCYDEKNFKVPIMEAIVRVVGK
Ga0210408_103404483	3300021178	Soil	GYYHAKRNNWIADPESFENNVNKLNNYCYDEKNFKVPIMEAVERVLGK
Ga0213877_100968811	3300021372	Bulk Soil	LSGYSHNKRNNLIIDLESFEENVNKLTNYCYDEKNFKVPIMEAIVRVLGK
Ga0210386_112000581	3300021406	Soil	NWLSGYYHAKRNNWIADPESFENNVNKLNNYCYDEKNFKVPIMEAVGQVLGGRK
Ga0210402_102147131	3300021478	Soil	MPNANNWTIQTESFEDNVNKLTNYCYDEKNFKVPIM
Ga0210402_111144312	3300021478	Soil	TIMPNANNWTIQTESFEDNVNKLTNYCYDEKNFKVPIMEAIERVLGK
Ga0210410_115661703	3300021479	Soil	KRNNWIIQTESFEDNVNKLNNYCYDEKNFKVPIVEAIERVLGK
Ga0126371_100615372	3300021560	Tropical Forest Soil	MGFGISGYYHAKRNKTIIDLDTFEDNVSKVRNYCYDEKNFKVPIMEAIERVLGK
Ga0126371_138920213	3300021560	Tropical Forest Soil	ALESFEENVNKLNNYCYDEKNFKVPIMEAIVRVLGK
Ga0207692_102727553	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	HAKRNNRIVDSESFENNVNKLNNYCYDEKNFKVPIIEAVERVLGK
Ga0209465_102488672	3300027874	Tropical Forest Soil	NKIIDLDTFEDNVSKVQSYCYEEKNFKVPIMKAVETVLGGRK
Ga0209465_103822502	3300027874	Tropical Forest Soil	NKIIDLDTFEDNVSKVQSYCYEEKNFKVPIMKAVETVLGKSSNAR
Ga0307300_103025821	3300028880	Soil	IINLESFEDNVNKLNNYCYDEKNFKVPIMEAIERVLGK
Ga0318516_104457583	3300031543	Soil	DLESFEENVNKLNNYCYDEKNFKVPIMEAIVRVVGK
Ga0318538_105780261	3300031546	Soil	RNNLIIDLESFEENVNKLNNYCYDEKNFKVPIMEAIVRVVGK
Ga0310915_101621751	3300031573	Soil	LESFEENVNKLNNYCYDEKNFKVPIMEAIVRVVGK
Ga0310915_109830062	3300031573	Soil	YYHAKRNNWIIDSESFEDNVSKLTSYCYDEKNFKVPIMEAVERVLSK
Ga0318561_104849371	3300031679	Soil	LESFEENVNKLTNYCYDEKNFKVPIMEAIVRVLGK
Ga0318574_108864331	3300031680	Soil	SHAKTSNLNIALESFEENVNKLNNYCYDEKNFKVPIMEAIVRVLGK
Ga0318572_105751573	3300031681	Soil	WLSGYSHAKSANLIIALESVEENVNKLTNYCYDEKNFKVPIMEAIVRVLGK
Ga0318560_102762761	3300031682	Soil	LLESFEENVNKLNNYCYDEKNFKVPIMEAIVRVVGK
Ga0306917_114317881	3300031719	Soil	IDLESFEDNVSKLTNYYYDEKNFKVPIMEAVEQVLGGRK
Ga0306917_114474141	3300031719	Soil	SGYSHAKSTNLTIDLESFEENVHKLTTYCYDEKNFKVPIMEAIVRVLGK
Ga0318500_101967261	3300031724	Soil	LSGYSHAKRNNLIIDLESFEENVNKLNNYCYDEKNFKVPIMEAIVRVVGK
Ga0318554_105719222	3300031765	Soil	AKRNNWIIALESFEDTVSKLTNYCYDEKNFQVPIVEAVERVLGK
Ga0318509_102310641	3300031768	Soil	SHAKRENLIIDLESFEENVNKLNNYCYDEKNFKVPIMEAIVRVVGK
Ga0318548_104075393	3300031793	Soil	IIALESVEENVNKLTNYCYDEKNFKVPIMEAIVRVLGK
Ga0318557_105208321	3300031795	Soil	LSGYHHAKRNNWIIALESFEDTVSKLTNYCYDEKNFQVPIVEAVERVLGK
Ga0318550_100892934	3300031797	Soil	IIDLETLEDNVSKVKNYCYDEKNFKVPIMKAVETVLGKSSNAR
Ga0310917_100575087	3300031833	Soil	HAKRNNLIIDLESFEENVNKLNNYCYDEKNFKVPIMEAIVRVVGK
Ga0318517_105009692	3300031835	Soil	CYSHAKRNNLIIDLESFEENVNKLNNYCYDEKNFKVPIMEAIVRVVGK
Ga0306919_106520673	3300031879	Soil	AAWLSGYSHAKSANLIIALESFGENVNKLTNHCYDEKNFKVPIMEAIVRVLGK
Ga0306919_109093872	3300031879	Soil	LIIDLESFEENVNKLNNYCYDEKNFKVPIMEAIVRVVGK
Ga0318544_101879302	3300031880	Soil	NLIIALESFEENVNKLTNYCYDEKNFKVPIMEAIVRVLGK
Ga0318544_104139513	3300031880	Soil	SHAKRENLIIDLESFEENVNKLNNYCYDEKNFKVPIMEAIVRIVGK
Ga0318520_101641171	3300031897	Soil	IDLESFEENVNKLNNYCYDEKNFKVPIMEAIVRVVGK
Ga0306923_101038721	3300031910	Soil	SHAKSNNLIIDLESFEENVNKLTNYCYDEKNFKVPIMEAIERIVGK
Ga0306923_110073502	3300031910	Soil	DLESFEENVNKLTNYCYDEKNFKVPIMEAIVRIVGK
Ga0306921_102376736	3300031912	Soil	GYSHAKSNNLIIALESFEENVNKLTNYCYDEKNFKVPIMEAIVKVLGK
Ga0306921_104674971	3300031912	Soil	AKRNNKIIDLDTFEDKASKLTNYCYDEKNFKVPIMEAVERVLSK
Ga0306921_114628351	3300031912	Soil	WLSGYSHAKRENLIIDLESFEENVNKLNNYCYDEKNFKVPIMEAIVRIVGK
Ga0306921_124326061	3300031912	Soil	ALESFEENVNKLNNYCYDEKNFKVPIMEAIVRILGK
Ga0310912_114150261	3300031941	Soil	DLQAFEENMNKVQNYCYDEKNFKVPIMEAVERVLGK
Ga0310916_103835253	3300031942	Soil	KSNNLIIDLESFEENVNKLTNYCYDEKNFKVPIMEAIVRVVGK
Ga0310916_104683571	3300031942	Soil	IIDTESFENNVNKLNNYCYDEKNFKVPIMEAVERVLGK
Ga0310910_101989201	3300031946	Soil	LIIDLESFEENVNKLTNYCYDEKNFKVPIMEAIERIVGK
Ga0310910_104190641	3300031946	Soil	NRRLVKWLLSYKRNNLIIDLESFEENVNKLTSYCYDEKNFKVPIMEAIERIVGK
Ga0310909_102683024	3300031947	Soil	YSHAKRNNLIIDLESFEENVNKLNNYCYDEKNFKVPIMEAIVRVVGK
Ga0310909_113408441	3300031947	Soil	WLIAAWLSGYSHAKTSNLNIALESFEENVNKLNNYCYDEKNFKVPIMEAIVRILGK
Ga0306926_103430061	3300031954	Soil	LANRRLVKCYSHAKRNNLIIDLESFEENVNKLNNYCYDEKNFKVPIMEAIVRVVGK
Ga0306926_114507412	3300031954	Soil	HAKRNNWIIDLESFEDNVSKLTNYCYDEKNFKVPIMEAVEQVLGGRK
Ga0318531_100047581	3300031981	Soil	SHAKSNNLIIALESFEENVNKLTNYCYDEKNFKVPIMEAIVRVLGK
Ga0306922_102223124	3300032001	Soil	NLIIALESFEANVNKLTNYCYDEKNFKVPIMEAIVRVLGK
Ga0306922_106229993	3300032001	Soil	DLESFEENVNKLTNYCYDEKNFKVPIMEAIVRVVGK
Ga0310911_105331681	3300032035	Soil	HAKRNNSIVDLESFENNVNKLNNYCYDEKNFKVPIMEAVERVLGK
Ga0318504_101420624	3300032063	Soil	HNKRNNLIIDLESFEENVNKLTNYCYDEKNFKVPIMEAIERIVGK
Ga0318513_106303921	3300032065	Soil	SRWLIAAWLSGYSHAKRTNLIIELESFEENVNKLTNYCYDEQNFKVPIMEAIVRVLGK
Ga0318514_104538001	3300032066	Soil	LIIALESVEENVNKLTNYCYDEKNFKVPIMEAIVRVLGK
Ga0318540_105592002	3300032094	Soil	RNNLIIDLESFEENVNKLTNYCYDEKNFKVPIMEAIVRVLGK
Ga0310914_101122135	3300033289	Soil	LIIALESFEANVNKLTNYCYDEKNFKVPIMEAIVRVLGK
Ga0318519_104803541	3300033290	Soil	NRTLDLQAFEENMNKVQNYCYDEKNSKVPIMEAVERVLDK
Ga0318519_107050991	3300033290	Soil	GYSHAKTSNLNIALESFEENVNKLNNYCYDEKNFKVPIMEAIVRILGK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F050622

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences