Metagenome / Metatranscriptome Family F050655

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F050655
Family Type	Metagenome / Metatranscriptome
Number of Sequences	145
Average Sequence Length	53 residues
Representative Sequence	MTDAVPEADALEQRQPLLERDAPEQVPEIDVEVPEEDALEQAMPVPFDEDDAPR
Number of Associated Samples	87
Number of Associated Scaffolds	145

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	85.52 %
% of genes near scaffold ends (potentially truncated)	20.00 %
% of genes from short scaffolds (< 2000 bps)	84.83 %
Associated GOLD sequencing projects	79
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (59.310 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (22.069 % of family members)
Environment Ontology (ENVO)	Unclassified (30.345 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (31.034 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 25.93% β-sheet: 0.00% Coil/Unstructured: 74.07%
Feature Viewer

Powered by Feature Viewer

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 145 Family Scaffolds
PF00156	Pribosyltran	49.66
PF01139	RtcB	16.55
PF11387	DUF2795	4.83
PF07498	Rho_N	4.14
PF00300	His_Phos_1	3.45
PF00570	HRDC	2.76
PF13361	UvrD_C	2.76
PF14535	AMP-binding_C_2	2.07
PF01175	Urocanase	0.69
PF02517	Rce1-like	0.69
PF01951	Archease	0.69

COG ID	Name	Functional Category	% Frequency in 145 Family Scaffolds
COG1690	RNA-splicing ligase RtcB, repairs tRNA damage	Translation, ribosomal structure and biogenesis [J]	16.55
COG1266	Membrane protease YdiL, CAAX protease family	Posttranslational modification, protein turnover, chaperones [O]	0.69
COG1371	Archease, activates RNA ligation by RtcB (tRNA splicing)	Translation, ribosomal structure and biogenesis [J]	0.69
COG2987	Urocanate hydratase	Amino acid transport and metabolism [E]	0.69
COG4449	Predicted protease, Abi (CAAX) family	General function prediction only [R]	0.69

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	60.00 %
Unclassified	root	N/A	40.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	59.31 %
Unclassified	root	N/A	40.00 %
Viruses	superkingdom	All Organisms → Viruses	0.69 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	59.31 %
Unclassified	root	N/A	40.00 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.69 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	40.00 %
Unclassified	root	N/A	40.00 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.00 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	38.62 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.69 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.00 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	23.45 %
Nitriliruptoria	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria	0.69 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	0.69 %
Acidimicrobiia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia	0.69 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.00 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	1.38 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.38 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.69 %
Euzebyales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria → Euzebyales	0.69 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	0.69 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	0.69 %
unclassified Acidimicrobiia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia	0.69 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.00 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1.38 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.38 %
Acidimicrobiia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	0.69 %
unclassified Euzebyales	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria → Euzebyales → unclassified Euzebyales	0.69 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.69 %
Nocardiopsaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Nocardiopsaceae	0.69 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.69 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.00 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1.38 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.38 %
Thermobifida	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Nocardiopsaceae → Thermobifida	0.69 %
Euzebyales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria → Euzebyales → unclassified Euzebyales → Euzebyales bacterium	0.69 %
Acidimicrobiia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	0.69 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.69 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.69 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.00 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1.38 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.38 %
Thermobifida cellulosilytica	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Nocardiopsaceae → Thermobifida → Thermobifida cellulosilytica	0.69 %
Euzebyales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria → Euzebyales → unclassified Euzebyales → Euzebyales bacterium	0.69 %
Acidimicrobiia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	0.69 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.69 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.69 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.69 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000550\|F24TB_10862001	Not Available	1034	Open in IMG/M
3300000559\|F14TC_101131830	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	1229	Open in IMG/M
3300003203\|JGI25406J46586_10010336	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4144	Open in IMG/M
3300003373\|JGI25407J50210_10017083	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1882	Open in IMG/M
3300003373\|JGI25407J50210_10060280	All Organisms → cellular organisms → Bacteria	954	Open in IMG/M
3300003373\|JGI25407J50210_10085071	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	784	Open in IMG/M
3300003373\|JGI25407J50210_10087776	All Organisms → cellular organisms → Bacteria	771	Open in IMG/M
3300003373\|JGI25407J50210_10132619	Not Available	613	Open in IMG/M
3300003373\|JGI25407J50210_10135081	All Organisms → cellular organisms → Bacteria	607	Open in IMG/M
3300003373\|JGI25407J50210_10158875	All Organisms → cellular organisms → Bacteria	557	Open in IMG/M
3300003373\|JGI25407J50210_10175069	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Nocardiopsaceae → Thermobifida → Thermobifida cellulosilytica	529	Open in IMG/M
3300004016\|Ga0058689_10003614	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2563	Open in IMG/M
3300004016\|Ga0058689_10125854	Not Available	568	Open in IMG/M
3300004479\|Ga0062595_101485361	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	624	Open in IMG/M
3300005169\|Ga0066810_10181868	All Organisms → cellular organisms → Bacteria	519	Open in IMG/M
3300005353\|Ga0070669_100510793	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	998	Open in IMG/M
3300005562\|Ga0058697_10055136	All Organisms → cellular organisms → Bacteria	1535	Open in IMG/M
3300005562\|Ga0058697_10173437	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	958	Open in IMG/M
3300005981\|Ga0081538_10008493	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	8703	Open in IMG/M
3300005981\|Ga0081538_10046816	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2661	Open in IMG/M
3300005981\|Ga0081538_10077055	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1798	Open in IMG/M
3300005981\|Ga0081538_10120224	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1264	Open in IMG/M
3300005983\|Ga0081540_1028327	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3148	Open in IMG/M
3300005985\|Ga0081539_10029099	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3461	Open in IMG/M
3300005985\|Ga0081539_10109860	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1390	Open in IMG/M
3300006049\|Ga0075417_10167816	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1028	Open in IMG/M
3300006169\|Ga0082029_1068380	All Organisms → cellular organisms → Bacteria	1094	Open in IMG/M
3300006844\|Ga0075428_100417946	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1437	Open in IMG/M
3300006844\|Ga0075428_102066302	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	590	Open in IMG/M
3300006854\|Ga0075425_100031619	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	5874	Open in IMG/M
3300006918\|Ga0079216_11113190	All Organisms → cellular organisms → Bacteria	624	Open in IMG/M
3300006969\|Ga0075419_10997057	Not Available	609	Open in IMG/M
3300007076\|Ga0075435_100645342	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	919	Open in IMG/M
3300009789\|Ga0126307_10018885	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	5173	Open in IMG/M
3300009789\|Ga0126307_10072409	All Organisms → cellular organisms → Bacteria	2714	Open in IMG/M
3300009789\|Ga0126307_10405508	Not Available	1099	Open in IMG/M
3300009789\|Ga0126307_10502899	Not Available	978	Open in IMG/M
3300009789\|Ga0126307_11672182	Not Available	517	Open in IMG/M
3300009805\|Ga0105079_1039393	Not Available	531	Open in IMG/M
3300009840\|Ga0126313_10002694	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	10048	Open in IMG/M
3300009840\|Ga0126313_10497716	Not Available	976	Open in IMG/M
3300010036\|Ga0126305_10938543	All Organisms → cellular organisms → Bacteria	592	Open in IMG/M
3300010040\|Ga0126308_10252903	Not Available	1146	Open in IMG/M
3300010040\|Ga0126308_10373988	Not Available	947	Open in IMG/M
3300010041\|Ga0126312_10844852	Not Available	665	Open in IMG/M
3300010042\|Ga0126314_11011323	Not Available	617	Open in IMG/M
3300010145\|Ga0126321_1070062	Not Available	539	Open in IMG/M
3300010145\|Ga0126321_1478632	Not Available	701	Open in IMG/M
3300010166\|Ga0126306_10000580	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	17451	Open in IMG/M
3300010166\|Ga0126306_10452180	All Organisms → Viruses → Predicted Viral	1010	Open in IMG/M
3300010166\|Ga0126306_11833827	Not Available	508	Open in IMG/M
3300012938\|Ga0162651_100011155	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1109	Open in IMG/M
3300013307\|Ga0157372_12403099	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	605	Open in IMG/M
3300014487\|Ga0182000_10000611	All Organisms → cellular organisms → Bacteria	6267	Open in IMG/M
3300014487\|Ga0182000_10036243	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1406	Open in IMG/M
3300014487\|Ga0182000_10146894	All Organisms → cellular organisms → Bacteria	849	Open in IMG/M
3300014487\|Ga0182000_10153239	Not Available	837	Open in IMG/M
3300014488\|Ga0182001_10346497	Not Available	623	Open in IMG/M
3300017965\|Ga0190266_10019194	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1964	Open in IMG/M
3300017997\|Ga0184610_1255843	Not Available	581	Open in IMG/M
3300018000\|Ga0184604_10149078	Not Available	770	Open in IMG/M
3300018000\|Ga0184604_10182941	Not Available	709	Open in IMG/M
3300018054\|Ga0184621_10221111	Not Available	678	Open in IMG/M
3300018061\|Ga0184619_10072927	Not Available	1519	Open in IMG/M
3300018073\|Ga0184624_10042379	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria → Euzebyales → unclassified Euzebyales → Euzebyales bacterium	1812	Open in IMG/M
3300018073\|Ga0184624_10388576	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	621	Open in IMG/M
3300018075\|Ga0184632_10206218	Not Available	865	Open in IMG/M
3300018076\|Ga0184609_10003952	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	5063	Open in IMG/M
3300018076\|Ga0184609_10198706	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	934	Open in IMG/M
3300018432\|Ga0190275_10773660	All Organisms → cellular organisms → Bacteria	1022	Open in IMG/M
3300018432\|Ga0190275_11227973	All Organisms → cellular organisms → Bacteria	825	Open in IMG/M
3300018465\|Ga0190269_10112565	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1352	Open in IMG/M
3300018465\|Ga0190269_11719080	All Organisms → cellular organisms → Bacteria → Terrabacteria group	530	Open in IMG/M
3300018466\|Ga0190268_10035142	All Organisms → cellular organisms → Bacteria	1828	Open in IMG/M
3300018466\|Ga0190268_10057242	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1586	Open in IMG/M
3300018466\|Ga0190268_10105696	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1322	Open in IMG/M
3300018466\|Ga0190268_10960902	Not Available	674	Open in IMG/M
3300018466\|Ga0190268_11080670	Not Available	650	Open in IMG/M
3300018476\|Ga0190274_10050505	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3006	Open in IMG/M
3300018476\|Ga0190274_10573946	All Organisms → cellular organisms → Bacteria	1148	Open in IMG/M
3300018476\|Ga0190274_11620829	Not Available	740	Open in IMG/M
3300019259\|Ga0184646_1580049	Not Available	576	Open in IMG/M
3300019377\|Ga0190264_10371840	All Organisms → cellular organisms → Bacteria	910	Open in IMG/M
3300019377\|Ga0190264_10592093	All Organisms → cellular organisms → Bacteria	788	Open in IMG/M
3300019377\|Ga0190264_11121054	Not Available	644	Open in IMG/M
3300019767\|Ga0190267_10387317	Not Available	773	Open in IMG/M
3300019767\|Ga0190267_11361739	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	535	Open in IMG/M
3300020003\|Ga0193739_1001279	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	7098	Open in IMG/M
3300021078\|Ga0210381_10044643	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1306	Open in IMG/M
3300021078\|Ga0210381_10302776	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	577	Open in IMG/M
3300022195\|Ga0222625_1022957	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	810	Open in IMG/M
3300022195\|Ga0222625_1344377	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1798	Open in IMG/M
3300022534\|Ga0224452_1062409	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1116	Open in IMG/M
3300022694\|Ga0222623_10018230	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2609	Open in IMG/M
3300025923\|Ga0207681_10362637	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1163	Open in IMG/M
3300027056\|Ga0209879_1065037	Not Available	581	Open in IMG/M
3300027718\|Ga0209795_10097038	All Organisms → cellular organisms → Bacteria	846	Open in IMG/M
3300027750\|Ga0209461_10015648	Not Available	1329	Open in IMG/M
3300027750\|Ga0209461_10079139	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	715	Open in IMG/M
3300027761\|Ga0209462_10125744	Not Available	605	Open in IMG/M
3300027809\|Ga0209574_10032601	Not Available	1252	Open in IMG/M
3300027873\|Ga0209814_10001603	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	8069	Open in IMG/M
3300027907\|Ga0207428_10151562	Not Available	1764	Open in IMG/M
3300028716\|Ga0307311_10096137	Not Available	824	Open in IMG/M
3300028722\|Ga0307319_10029441	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1697	Open in IMG/M
3300028722\|Ga0307319_10072750	All Organisms → cellular organisms → Bacteria	1089	Open in IMG/M
3300028807\|Ga0307305_10434172	Not Available	592	Open in IMG/M
3300028824\|Ga0307310_10733117	Not Available	508	Open in IMG/M
3300028876\|Ga0307286_10334136	Not Available	563	Open in IMG/M
3300028878\|Ga0307278_10000174	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	32693	Open in IMG/M
3300028881\|Ga0307277_10039201	All Organisms → cellular organisms → Bacteria	1908	Open in IMG/M
3300028881\|Ga0307277_10214051	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	846	Open in IMG/M
3300030336\|Ga0247826_10971457	Not Available	673	Open in IMG/M
3300030498\|Ga0268247_10421701	All Organisms → cellular organisms → Bacteria	607	Open in IMG/M
3300030510\|Ga0268243_1000194	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	9533	Open in IMG/M
3300030510\|Ga0268243_1022555	Not Available	1254	Open in IMG/M
3300030510\|Ga0268243_1039094	Not Available	1002	Open in IMG/M
3300030510\|Ga0268243_1189487	Not Available	509	Open in IMG/M
3300030510\|Ga0268243_1196774	All Organisms → cellular organisms → Bacteria	501	Open in IMG/M
3300030514\|Ga0268253_10288487	All Organisms → cellular organisms → Bacteria	564	Open in IMG/M
3300030830\|Ga0308205_1066871	Not Available	502	Open in IMG/M
3300031091\|Ga0308201_10059175	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	990	Open in IMG/M
3300031092\|Ga0308204_10120574	Not Available	747	Open in IMG/M
3300031548\|Ga0307408_100148441	Not Available	1848	Open in IMG/M
3300031548\|Ga0307408_100149870	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1840	Open in IMG/M
3300031548\|Ga0307408_100483675	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1080	Open in IMG/M
3300031548\|Ga0307408_102300129	Not Available	522	Open in IMG/M
3300031731\|Ga0307405_11772673	Not Available	548	Open in IMG/M
3300031901\|Ga0307406_10695206	All Organisms → cellular organisms → Bacteria	848	Open in IMG/M
3300031901\|Ga0307406_10949243	Not Available	735	Open in IMG/M
3300031911\|Ga0307412_10605101	All Organisms → cellular organisms → Bacteria	929	Open in IMG/M
3300031995\|Ga0307409_100069637	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2789	Open in IMG/M
3300031995\|Ga0307409_102554729	Not Available	539	Open in IMG/M
3300032002\|Ga0307416_103182242	Not Available	549	Open in IMG/M
3300032002\|Ga0307416_103479489	Not Available	527	Open in IMG/M
3300032005\|Ga0307411_11472374	Not Available	625	Open in IMG/M
3300032080\|Ga0326721_10019280	Not Available	2613	Open in IMG/M
3300032126\|Ga0307415_101027904	Not Available	767	Open in IMG/M
3300032159\|Ga0268251_10004040	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3925	Open in IMG/M
3300032159\|Ga0268251_10026970	Not Available	1753	Open in IMG/M
3300032159\|Ga0268251_10138838	Not Available	905	Open in IMG/M
3300034001\|Ga0334919_084904	Not Available	521	Open in IMG/M
3300034026\|Ga0334946_064335	All Organisms → cellular organisms → Bacteria	616	Open in IMG/M
3300034172\|Ga0334913_015157	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1769	Open in IMG/M
3300034172\|Ga0334913_092643	All Organisms → cellular organisms → Bacteria	638	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	62.07%
Host-Associated	Host-Associated	37.93%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	48.97%
Plants	Host-Associated → Plants	37.93%
Aquatic	Environmental → Aquatic	13.10%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	48.28%
Rhizosphere	Host-Associated → Plants → Rhizosphere	17.24%
Sediment	Environmental → Aquatic → Sediment	8.28%
Roots	Host-Associated → Plants → Roots	8.28%
Phylloplane	Host-Associated → Plants → Phylloplane	6.21%
Freshwater	Environmental → Aquatic → Freshwater	4.83%
Phyllosphere	Host-Associated → Plants → Phyllosphere	3.45%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.76%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	0.69%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	44.83%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	15.86%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	8.28%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	8.28%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified	6.21%
Sediment	Environmental → Aquatic → Freshwater → Sediment	3.45%
Phylloplane/Leaf Surface	Host-Associated → Plants → Phyllosphere → Phylloplane/Leaf Surface	3.45%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.76%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	1.38%
Loam	Environmental → Terrestrial → Soil → Loam	1.38%
Sand	Environmental → Terrestrial → Soil → Sand	1.38%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.38%
Soil Crust	Environmental → Terrestrial → Soil → Soil Crust	0.69%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	0.69%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	40.69%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	15.86%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	8.28%
Unclassified	Host-Associated → Plants → Roots → Rhizosphere → Unclassified	8.28%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified	6.21%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	3.45%
Unclassified	Host-Associated → Plants → Phyllosphere → Phylloplane/Leaf Surface → Unclassified	3.45%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.76%
Desert	Environmental → Terrestrial → Soil → Unclassified → Desert	2.07%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	1.38%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.38%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.38%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	1.38%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.38%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.69%
Unclassified	Environmental → Terrestrial → Soil → Soil Crust → Unclassified	0.69%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	0.69%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	22.07%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	10.34%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	9.66%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Unclassified → Tabebuia Heterophylla Rhizosphere	8.28%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	7.59%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	6.90%
Agave	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified → Agave	6.21%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	5.52%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	3.45%
Agave	Host-Associated → Plants → Phyllosphere → Phylloplane/Leaf Surface → Unclassified → Agave	3.45%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	2.76%
Sub-Biocrust Soil	Environmental → Terrestrial → Soil → Unclassified → Desert → Sub-Biocrust Soil	2.07%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	1.38%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.38%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.38%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	1.38%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.38%
Termite Nest	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Termite Nest	0.69%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.69%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.69%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.69%
Hypolithic Biocrust	Environmental → Terrestrial → Soil → Soil Crust → Unclassified → Hypolithic Biocrust	0.69%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	0.69%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.69%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000550	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU amended with acetate total DNA F2.4 TB clc assemly	Environmental	Open in IMG/M
3300000559	Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemly	Environmental	Open in IMG/M
3300003203	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2	Host-Associated	Open in IMG/M
3300003373	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1	Host-Associated	Open in IMG/M
3300004016	Agave microbial communities from Guanajuato, Mexico - As.Ma.rz	Host-Associated	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005169	Soil and rhizosphere microbial communities from Laval, Canada - mgHPA	Environmental	Open in IMG/M
3300005353	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG	Host-Associated	Open in IMG/M
3300005562	Agave microbial communities from Guanajuato, Mexico - As.Ma.e	Host-Associated	Open in IMG/M
3300005981	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1	Host-Associated	Open in IMG/M
3300005983	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1	Host-Associated	Open in IMG/M
3300005985	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2	Host-Associated	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006169	Termite nest microbial communities from Madurai, India	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006918	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100	Environmental	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009789	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28	Environmental	Open in IMG/M
3300009805	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_0_10	Environmental	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010036	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26	Environmental	Open in IMG/M
3300010040	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55	Environmental	Open in IMG/M
3300010041	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104A	Environmental	Open in IMG/M
3300010042	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105B	Environmental	Open in IMG/M
3300010145	Soil microbial communities from Hawaii, USA to study soil gas exchange rates - KP-HI-INT metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010166	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27	Environmental	Open in IMG/M
3300012938	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t2i015	Environmental	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300014487	Bulk soil microbial communities from Mexico - Magueyal (Ma) metaG	Environmental	Open in IMG/M
3300014488	Bulk soil microbial communities from Mexico - San Felipe (SF) metaG	Environmental	Open in IMG/M
3300017965	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 220 T	Environmental	Open in IMG/M
3300017997	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_coex	Environmental	Open in IMG/M
3300018000	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_coex	Environmental	Open in IMG/M
3300018054	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1	Environmental	Open in IMG/M
3300018061	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1	Environmental	Open in IMG/M
3300018073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_b1	Environmental	Open in IMG/M
3300018075	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b1	Environmental	Open in IMG/M
3300018076	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coex	Environmental	Open in IMG/M
3300018432	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 550 T	Environmental	Open in IMG/M
3300018465	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 IS	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300019259	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019377	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 T	Environmental	Open in IMG/M
3300019767	Populus adjacent soil microbial communities from riparian zone of Oak Creek, Arizona, USA - 239 T	Environmental	Open in IMG/M
3300020003	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2a2	Environmental	Open in IMG/M
3300021078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_coex redo	Environmental	Open in IMG/M
3300022195	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022534	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_b1	Environmental	Open in IMG/M
3300022694	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_coex	Environmental	Open in IMG/M
3300025923	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300027056	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_20_30 (SPAdes)	Environmental	Open in IMG/M
3300027718	Agave microbial communities from Guanajuato, Mexico - Or.Ma.rz (SPAdes)	Host-Associated	Open in IMG/M
3300027750	Agave microbial communities from Guanajuato, Mexico - As.Ma.rz (SPAdes)	Host-Associated	Open in IMG/M
3300027761	Agave microbial communities from Guanajuato, Mexico - As.Sf.rz (SPAdes)	Host-Associated	Open in IMG/M
3300027809	Agave microbial communities from Guanajuato, Mexico - Mg.Ma.rz (SPAdes)	Host-Associated	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300028716	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_198	Environmental	Open in IMG/M
3300028722	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_368	Environmental	Open in IMG/M
3300028807	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_186	Environmental	Open in IMG/M
3300028824	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197	Environmental	Open in IMG/M
3300028876	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_140	Environmental	Open in IMG/M
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental	Open in IMG/M
3300028881	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_116	Environmental	Open in IMG/M
3300030336	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day1	Environmental	Open in IMG/M
3300030498	Agave microbial communities from Guanajuato, Mexico - Or.Ma.e (v2)	Host-Associated	Open in IMG/M
3300030510	Bulk soil microbial communities from Mexico - Magueyal (Ma) metaG (v2)	Environmental	Open in IMG/M
3300030514	Agave microbial communities from Guanajuato, Mexico - Mg.Ma.rz (v2)	Host-Associated	Open in IMG/M
3300030830	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_368 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031091	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_355 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031092	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_367 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031548	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3	Host-Associated	Open in IMG/M
3300031731	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1	Host-Associated	Open in IMG/M
3300031901	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2	Host-Associated	Open in IMG/M
3300031911	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1	Host-Associated	Open in IMG/M
3300031995	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2	Host-Associated	Open in IMG/M
3300032002	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3	Host-Associated	Open in IMG/M
3300032005	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1	Host-Associated	Open in IMG/M
3300032080	Soil microbial communities from Southern Great Plains, Lamont, Oklahoma, United States - SGP_1_2016	Environmental	Open in IMG/M
3300032126	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2	Host-Associated	Open in IMG/M
3300032159	Agave microbial communities from Guanajuato, Mexico - As.Ma.e (v2)	Host-Associated	Open in IMG/M
3300034001	Biocrust microbial communities from Mojave Desert, California, United States - 15HMC	Environmental	Open in IMG/M
3300034026	Sub-biocrust soil microbial communities from Mojave Desert, California, United States - 42SMS	Environmental	Open in IMG/M
3300034172	Sub-biocrust soil microbial communities from Mojave Desert, California, United States - 9HMS	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
F24TB_108620013	3300000550	Soil	MTDAVPEADALEQRQPLLEPEADERVPEIDVEVPEEDALEQAMPVLFDEDDAPR*
F14TC_1011318303	3300000559	Soil	MTDAVPEADALEQSQPLLERDANEQVPEIDVEVPEGDALEQAMPVPFDEDDAPR*
JGI25406J46586_100103364	3300003203	Tabebuia Heterophylla Rhizosphere	MTDAVPEADALEQRQPLLERDPEQVPEIDVEVPEEDALEQAMPVPFDEDDAPR*
JGI25407J50210_100170832	3300003373	Tabebuia Heterophylla Rhizosphere	MTDAVPEADAQEQRQPLLEREADEQPPEIDLEVPEGDALEQAMPVPFDEDDAPR*
JGI25407J50210_100602802	3300003373	Tabebuia Heterophylla Rhizosphere	MTDAVPEADAQEQRQPLLDGDTPEEVPEIDVEVPEEDALEQAMPVPFDEDDAPR*
JGI25407J50210_100850713	3300003373	Tabebuia Heterophylla Rhizosphere	MTDAVPEADAQEQRQPLLERDNTEQVPEIDLEVPEGDALEQAMPVPLDEDDEPR*
JGI25407J50210_100877762	3300003373	Tabebuia Heterophylla Rhizosphere	MTDAVPEADAQEQRQPLLDRDSIDQVPEIDLEVPEGDALEQAMPVPLDEDDEPR*
JGI25407J50210_101326191	3300003373	Tabebuia Heterophylla Rhizosphere	MTDAVPEADALEQRQPVLDPDTPEEVPEIDVEVPEEDALEQAMPVPFDEDDAPR*
JGI25407J50210_101350811	3300003373	Tabebuia Heterophylla Rhizosphere	MTDAVPEADALEQRQPLLEGESDEQVPEIDVEVPEEDALEQAMPVPFDEDDAPR*
JGI25407J50210_101588751	3300003373	Tabebuia Heterophylla Rhizosphere	MTDAVPEADALEQRQPLLDPDTAEEVPEIDVEVPEEDALEQARPVPFDEDDAPR*
JGI25407J50210_101750691	3300003373	Tabebuia Heterophylla Rhizosphere	MTDAVPEADALEQRQPLLDRDTPEEVPEIDVEVPEEDALEQAMPVPFDEDDAPR*
Ga0058689_100036143	3300004016	Agave	MTEDAVPEADAQEQRAPLLEPDAPEEPAIDDEVPEADALDQARRVPIDEDDEPR*
Ga0058689_101258541	3300004016	Agave	MTDAVPEADAQEQRQPLLEGDTPELVPEIDVEVPEEDALEQSMPVPFDEDDAPR*
Ga0062595_1014853611	3300004479	Soil	MTDAVPEADALEQRQPLLDRDAPEQVPEIDVEVPEEDALEQAMPVPFDEDDAPR*
Ga0066810_101818682	3300005169	Soil	MTDAVPEADALEQRQPLLERDTPDLIPEIDIEVPEEDALEQAMSVPFDEDDAPR*
Ga0070669_1005107931	3300005353	Switchgrass Rhizosphere	MTDAVPEADALEQRQPLLDRDTPDLIPEIDIEVPEEDALEQAMSVPFDEDDAPR*
Ga0058697_100551362	3300005562	Agave	MTDAVPEADALEQSQPLVERDVPEQVPEIDVEVPEEDALEQAMPVPFDEDEAPR*
Ga0058697_101734372	3300005562	Agave	MTDAVPEADALEQRQPLVDGDAPEQVPEIDLEVPEEDALEQAMPVPFDEDDAPR*
Ga0081538_100084932	3300005981	Tabebuia Heterophylla Rhizosphere	MTEDAVPEADALEQRTPVLDRDLPEEPEIDDEVPEADALDQARPVPIDEDDEPR*
Ga0081538_100468164	3300005981	Tabebuia Heterophylla Rhizosphere	MTDAVPEADAQEQRQPLLERETDEQPPEIDIEVPEGDALDQAMPVPFDEDDAPR*
Ga0081538_100770552	3300005981	Tabebuia Heterophylla Rhizosphere	MTDAVPEADALEQRQPLVERDVPEQVPEIDVEVPEEDALEQAMPVPFDEDDAPR*
Ga0081538_101202243	3300005981	Tabebuia Heterophylla Rhizosphere	MTDAVPEADAQEQRQPLQEREAHEPPPEIDLEVPEGDALEQARPVPFDEDDAPR*
Ga0081540_10283273	3300005983	Tabebuia Heterophylla Rhizosphere	MTDAVPEADALEQRQPLLERDVPEDVPEIDIEVPEEDALEQAMPVPFDEDDAPR*
Ga0081539_100290993	3300005985	Tabebuia Heterophylla Rhizosphere	MTDAVPEADALEQRQPLVDGDTPEQVPEIDVEVPEEDALEQARPVPFDEDDAPR*
Ga0081539_101098601	3300005985	Tabebuia Heterophylla Rhizosphere	RSMTDAVPEADALEQRQPLLERDVPEQVPEIDVEVPEEDALEQAMPVPFDEDDAPR*
Ga0075417_101678162	3300006049	Populus Rhizosphere	MTDAVPEADALEQRQPLLDGDASEQVPEIDIEVPEEDALEQAMPVPFDEDDAPR*
Ga0082029_10683803	3300006169	Termite Nest	MTDAVPEADALEQRQPLLDPDTAEEIPEIDVEVPEEDALEQARPVPFDEDDAPR*
Ga0075428_1004179462	3300006844	Populus Rhizosphere	MTDAVPEADALEQRQPLLESEADAQVPEIDVEVPEEDALEQAMPVLFDEDDAPR*
Ga0075428_1020663022	3300006844	Populus Rhizosphere	MTDAVPEADAQEQRQPLLGDGDEQPPEIDLEVPEGDALEQAMPVPFDEDDAPR*
Ga0075425_1000316194	3300006854	Populus Rhizosphere	MTDAVPEADALEQRQPLVDGDTSEQVPEIDLEVPEEDALQQAMPVPFDEDDAPR*
Ga0079216_111131902	3300006918	Agricultural Soil	MTDAVPEADALEQRQPLVDRDTPEQVPEIDVEVPEEDALEQAMPVPFDEDDAPR*
Ga0075419_109970572	3300006969	Populus Rhizosphere	MTDAVPEADALEQRQPLLERDTPDLIPEIDIEVPEEDALEQAMSVP
Ga0075435_1006453422	3300007076	Populus Rhizosphere	DAVPEADALEQRQPLVDGDTSEQVPEIDLEVPEEDALQQAMPVPFDEDDAPR*
Ga0126307_100188852	3300009789	Serpentine Soil	MTDAVPEADALEQRQPLLERDNTEQVPEIDVEVPEGDALDQAIPAPFDEDDAPR*
Ga0126307_100724095	3300009789	Serpentine Soil	MTDAVPEADALEQSQPLLDRDVPEQVPEIDVEVPEEDALEQAMPVPFDEDDAPR*
Ga0126307_104055082	3300009789	Serpentine Soil	MTDAVPEADALEQSQPLLERDVPEQVPEIDVEVPEEDALEQAMPVPFDEDDAPR*
Ga0126307_105028992	3300009789	Serpentine Soil	MTDAVPEADALEQRQPLLERDNVDQVPEIDVEVPEGDALEQAMPVPFDEDDAPR*
Ga0126307_116721822	3300009789	Serpentine Soil	MTDAVPEADALEQRQPLLERDTPEQVPEIDIEVPEEDALEQAMPVPFDEDDAPR*
Ga0105079_10393932	3300009805	Groundwater Sand	ADALEQRIPLTDPGRPQPPAIADEVPEADAIEQAMPVPIDEDDEPR*
Ga0126313_100026946	3300009840	Serpentine Soil	MTDAVPEADALEQRQPLVDGDAPEQVPEIDVEVPEEDALEQAMPVPFDEDDAPR*
Ga0126313_104977163	3300009840	Serpentine Soil	MTDAVPEADALEQSQPLLDRDVPEQVPEIDIEVPEEDALEQAMPVPFDEDDAPR*
Ga0126305_109385431	3300010036	Serpentine Soil	MTDAVPEADALEQRRPLLDPDTAEEVPEIDVEVPEEDALEQAMPVPFDEDDAPR*
Ga0126308_102529031	3300010040	Serpentine Soil	TDAVPEADALEQSQPLLDRDVPEQVPEIDVEVPEEDALEQAMPVPFDEDDAPR*
Ga0126308_103739882	3300010040	Serpentine Soil	CLAKEDDPMTDAVPEADALEQSQPLLDRDAPEQVPEIDVEVPEEDALAQAMPVPFDEDDAPR*
Ga0126312_108448521	3300010041	Serpentine Soil	MTDAVPEADALEQRQPLLDPDTAEEVPDIDVEVPEEDALEQARPVPFDEDDAPR*
Ga0126314_110113233	3300010042	Serpentine Soil	MTDAVPEADALEQRQPLLERDNVDQVPEIDVEVPEGDALEQAMPV
Ga0126321_10700622	3300010145	Soil	MTEDAVPEADAQEQRTPLLEPDALEEPAIDDEVPEADALDQARRVPIDEDDEPR*
Ga0126321_14786323	3300010145	Soil	MTDAVPEADAQEQRQPLFERDNTEHVPEIDLEVPEGDALEQAMPVPLDEDDEPR*
Ga0126306_1000058012	3300010166	Serpentine Soil	MTDAVPEADALEQRQPLLDRDAPEEIPEIDVEVPEEDALEQAMPVPFDEDDAPR*
Ga0126306_104521801	3300010166	Serpentine Soil	MTDAVPEADALEQRQPLLERDNVDQVPEIDVEVPEGDALEQAMPVPFDEDDA
Ga0126306_118338272	3300010166	Serpentine Soil	MTDAVPEADALEQRQPLLEPEADEQVPEIDVEVPEEDALEQAMPVPFDEDDAPR*
Ga0162651_1000111552	3300012938	Soil	MTDAVPEADALEQRQPLLERDTPEQIPEIDIEVPEEDALEQAMPVPFDEDDAPR*
Ga0157372_124030992	3300013307	Corn Rhizosphere	MTDAVPEADALEQRQPLLERDTPDLIPEIDIEVPEEDALEQAMAGPFDEDDPPR*
Ga0182000_100006113	3300014487	Soil	MTDAVPEADALEQSQPLLEREASEQVPEIDVEVPEGDALEQAMPVPFDEDDAPR*
Ga0182000_100362432	3300014487	Soil	MTEDAVPEADAQEQRTPLLDPDAPEQPAIDDEVPEADALDQARRVPIDEDDEPR*
Ga0182000_101468942	3300014487	Soil	MTDAVPEADALEQRQSLLERDTAEQIPEIDIEVPEEDALDQAMPVPFDEDDAPR*
Ga0182000_101532391	3300014487	Soil	MTDAVPEADALEQRQPLVDGDTPEQVPEIDLEVPEEDALEQAMPVPFDE
Ga0182001_103464972	3300014488	Soil	MTDAVPEADAQEQRQPLLERDNVEQVPDIDLEVPEGDALEQALPVPLDEDDEPR*
Ga0190266_100191942	3300017965	Soil	MTDAVPEADALEQRQPLLDGDAPEQVPEIDVEVPEEDALEQALPVPFDEDDAPR
Ga0184610_12558431	3300017997	Groundwater Sediment	GRSMTDAVPEADALEQRQPLLERDTPDLIPEIDIEVPEEDALEQAMSVPFDEDDAPR
Ga0184604_101490781	3300018000	Groundwater Sediment	RSMTDAVPEADALEQRQPLLERDTPEQIPEIDIEVPEEDALEQAMPVPFDEDDAPR
Ga0184604_101829412	3300018000	Groundwater Sediment	MTDAVPEADALEQRQPLLDRDTPEQVPEIDVEVPEEDALEQAMPVPFDEDDAPR
Ga0184621_102211111	3300018054	Groundwater Sediment	MTDAVPEADALEQRQPLLDRDIPEQVPEIDVEVPEEDALEQAMPVPFDEDDAPR
Ga0184619_100729273	3300018061	Groundwater Sediment	MTDAVPEADALEQRQPLLDRDTPEQVPEIDVEVPEEDALEQAIPVPFDEDDAPR
Ga0184624_100423793	3300018073	Groundwater Sediment	MTDAVPEADALEQRQPLLESEADEQVPVIDVEVPEEDALEQAMPVLFDEDDAPR
Ga0184624_103885761	3300018073	Groundwater Sediment	MTDAVPEADALEQRQPLLERDTPEQIPEIAIEVPEEDALEQAMPVPFDEDDAPR
Ga0184632_102062182	3300018075	Groundwater Sediment	MTDAVPEADALEQRQPLLESEADAQVPEIDVEVPEEDALEQAMPVLFDEDDAPR
Ga0184609_100039526	3300018076	Groundwater Sediment	MTDAVPEADALEQRQPLLDPDAPEQLPEIDVEVPKEDALEQAMPVPFDEDDAPR
Ga0184609_101987062	3300018076	Groundwater Sediment	MTDAVPEADALEQRQPLLERDTPDLIPEIDIEVPEEDALEQAMPVPFDEDDAPR
Ga0190275_107736602	3300018432	Soil	MTDAVPEADALEQRQPLLDRDAPEEIPEIDVEVPEEDALEQAMPVPFDEDDAPR
Ga0190275_112279732	3300018432	Soil	MTDAVPEADALEQRQPLLEPEADEQVPEIAVEVPEEDALEQAMPVPFDEDDAPR
Ga0190269_101125652	3300018465	Soil	MTDAVPEADALEQRQPLLERDNVEQVPEIDVEVPEGDALEQAMPVPFDEDDAPR
Ga0190269_117190802	3300018465	Soil	MTDAVPEADALEQRQPLLDRDTPEQIPEIDIEVPEEDALEQAMPVPFDEDDAPR
Ga0190268_100351423	3300018466	Soil	MTDAVPEADALEQRQPLLEPEADEQVPEIDVEVPEEDALEQAMPVLFDEDDAPR
Ga0190268_100572422	3300018466	Soil	MTDAVPEADALEQRQPLLDGDAPEQVPEIDVEVPEEDALEQAMPVPFDEDDAPR
Ga0190268_101056963	3300018466	Soil	MTDAVPEADAQEQRQPLLERDNTEQVPEIDVEVPEADALDQAMPVPFDEDDAPR
Ga0190268_109609022	3300018466	Soil	MTDAVPEADALEQRQPLVDGDAPEQVPEIDVEVPEEDALEQAMPVPFDEDDAPR
Ga0190268_110806702	3300018466	Soil	MTDAVPEADALEQSQPLLERDANEQVPEIDVEVPEEDALEQAMPVPFDEDDAPR
Ga0190274_100505051	3300018476	Soil	MTDAVPEADALEQRQPLLESEADERVPEIDIEVPEEDALEQAMPVPFDEDDAPR
Ga0190274_105739462	3300018476	Soil	MTDAVPEADALEQRQPLLERDNTEQVPEIDVEVPEEDALEQAMPVPFDEDDAPR
Ga0190274_116208292	3300018476	Soil	MTDAVPEADALEQRQPLLEGDVPEQVPEIDVEVPEEDALEQAMPVPFDEDDAPR
Ga0184646_15800491	3300019259	Groundwater Sediment	MTDAVPEADALEQRQPLLERDTPDLIPEIDIEVPEEDALEQAMSVPFDEDDAPR
Ga0190264_103718402	3300019377	Soil	MTDAVPEADALEQRQPLLERDNTEQVPEIDVEVPEGDALDQAMPVPFDEDDAPR
Ga0190264_105920932	3300019377	Soil	MTDAVPEADALEQRQPLLERDVPEQVPEIDVEVPEEDALEQAMPVPFDEDDAPR
Ga0190264_111210543	3300019377	Soil	MTDAVPEADALEQRQPLLERDTPEQVPEIDVEVPEEDALEQAMPVPFDEDDAPR
Ga0190267_103873171	3300019767	Soil	MTDAVPEADALEQRQPLLDRDTPDLIPEIDIEVPEEDALEQAMPVPFDEDDAPR
Ga0190267_113617391	3300019767	Soil	MTDAVPEADALEQRQPLLGPDAPEQVPEIDVEVPEEDALEQAMPVPFDEDDAPR
Ga0193739_10012797	3300020003	Soil	MTDAVPEADALEQRQPLLDPDAPEQLPEIDVEVPEEDALEQAMPVPFDEDDAPR
Ga0210381_100446431	3300021078	Groundwater Sediment	MTDAVPEADALEQRQPLLDRDTPEQIPEIDVEVPEEDALEQAMPVPFDEDDAPR
Ga0210381_103027761	3300021078	Groundwater Sediment	MTDAVPEADALEQRQPLLEGDTPELIPEIDIEVPEEDALEQAMPAPFDEDDAPR
Ga0222625_10229572	3300022195	Groundwater Sediment	MTDAVPEADALEQRQPLLERDTPEQIPEIDIEVPEEDALEQAMPVPFDEDDAPR
Ga0222625_13443773	3300022195	Groundwater Sediment	MTDAVPEADALEQRQPLLDPDAPEQVPEIDVEVPEEDALEQAMPVPFDEDDAPR
Ga0224452_10624091	3300022534	Groundwater Sediment	TDAVPEADALEQRQPLLGPDAPEQVPEIDVEVPEEDALEQAMPVPFDEDDAPR
Ga0222623_100182303	3300022694	Groundwater Sediment	MTDAVPEADALEQRQPLLESEADEQVPEIDVEVPEEDALEQAMPVLFDEDDAPR
Ga0207681_103626372	3300025923	Switchgrass Rhizosphere	MTDAVPEADALEQRQPLLDRDTPDLIPEIDIEVPEEDALEQAMSVPFDEDDAPR
Ga0209879_10650371	3300027056	Groundwater Sand	PEADALEQRMPVLDRDPPREPTIDDEVPEADALDQARPVPIDEDDEPR
Ga0209795_100970382	3300027718	Agave	MTEDAVPEADAQEQRTPLLDRDAPEEPAIDDEVPEADALDQARPVPIDEDDEPR
Ga0209461_100156482	3300027750	Agave	MTEDAVPEADAQEQRTPLLEPDAPEEPAIDDEVPEADALDQARRVPIDEDDEPR
Ga0209461_100791392	3300027750	Agave	MTDAVPEADAQEQRQPLLEGDTPELVPEIDVEVPEEDALEQSMPVPFDEDDAPR
Ga0209462_101257441	3300027761	Agave	MTDAVPEADALEQSQPLLDRDVPEQVPEIDVEVPEEDALEQAMPVPFDEDDAPR
Ga0209574_100326013	3300027809	Agave	MTDAVPEADALEQRQPLVDGDVPEQVPEIDLEVPEEDALEQAMPVPFDEDDAPR
Ga0209814_100016033	3300027873	Populus Rhizosphere	MTDAVPEADALEQRQPLLDGDASEQVPEIDIEVPEEDALEQAMPVPFDEDDAPR
Ga0207428_101515622	3300027907	Populus Rhizosphere	MTDAVPEADALEQRQPLVDGDTSEQVPEIDLEVPEEDALQQAMPVPFDEDDAPR
Ga0307311_100961371	3300028716	Soil	GRSMTDAVPEADALEQRQPLLDRDIPEQVPEIDVEVPEEDALEQAMPVPFDEDDAPR
Ga0307319_100294412	3300028722	Soil	MTDAVPEADALEQRQPLLERDTPEQIPEIDIEVPEEDALEQAMPVPFDEDDATR
Ga0307319_100727503	3300028722	Soil	MTDAVPEADALEQRQPLLERDTPEQVPEIDIEVPEEDALEQAMPVPFDEDDAPR
Ga0307305_104341721	3300028807	Soil	MTDAVPEADALEQRQPLLDPDTPEQVPEIDVEVPEEDALQQAMPVPFDEDDAPR
Ga0307310_107331172	3300028824	Soil	LEQRQPLLDRDIPEQVPEIDVEVPEEDALEQAMPVPFDEDDAPR
Ga0307286_103341362	3300028876	Soil	MTDAVPEADALEQRQPLLERDTPEQIPEIAIEVPEEDALEQAMPVPFDEDNAPR
Ga0307278_100001748	3300028878	Soil	MTDAVPEADALEQRQPLLERDTPDQIPEIDVEVPEEDALEQAIPAPFDEDDAPR
Ga0307277_100392012	3300028881	Soil	MTDAVPEADALEQSQPLLERDANEQVPEIDVEVPEGDALEQAMPVPFDEDDAPR
Ga0307277_102140512	3300028881	Soil	DALEQRQPLVDGDAPEQVPEIDVEVPEEDALEQAMPVPFDEDDAPR
Ga0247826_109714572	3300030336	Soil	MTDAVPEADALEQRQSLLERDTPEQIPEIDIEVPEEDALEQAMPVPFDEDDAPR
Ga0268247_104217011	3300030498	Agave	MTDAVPEADALEQRQPLVDGDAPEQVPEIEVEVPEEDALEQAMPVPFDEDDAPR
Ga0268243_10001945	3300030510	Soil	MTDAVPEADALEQSQPLLEREASEQVPEIDVEVPEGDALEQAMPVPFDEDDAPR
Ga0268243_10225552	3300030510	Soil	MTEDAVPEADAQEQRTPLLDPDAPEQPAIDDEVPEADALDQARRVPIDEDDEPR
Ga0268243_10390943	3300030510	Soil	MTDAVPEADALEQRQPPLERDTTEQVPEIDVEVPEGDALDQAMPVPFDEDDAPR
Ga0268243_11894871	3300030510	Soil	MTDAVPEADALEQSQPLLDRDAPEQIPEIDIEVPEEDALEQAMPVPFDEDDAPR
Ga0268243_11967742	3300030510	Soil	MTDAVPEADALEQRQPLLERDVPEQIPEIDVEVPEEDALEQAMPIPFDEDDAPR
Ga0268253_102884871	3300030514	Agave	VPEADALEQRQPLLDDEDAPEQVPEIDVEIPEEDALEQAMPVPFDEDDAPR
Ga0308205_10668712	3300030830	Soil	MTDAVPEADALEQRQPLLERDNVDQVPEIDVEVPEGDALEQAMPVTFD
Ga0308201_100591751	3300031091	Soil	MTDAVPEADALEQRQPLLERDTPEQIPEIDIEVPEDDALEQAMPVP
Ga0308204_101205741	3300031092	Soil	DALEQRQPLLERDTPEQIPEIAIEVPEEDALEQAMPVPFDEDDAPR
Ga0307408_1001484412	3300031548	Rhizosphere	MTDAVPEADAQEQRQPLLERDNTEQVPEIDLEVPEGDALEQAMPVPLDEDDEPR
Ga0307408_1001498701	3300031548	Rhizosphere	MTDAVPEADALEQRQPLLERDTPEQVPEIDIEVPEEDALEQAMPVPFDEDDA
Ga0307408_1004836751	3300031548	Rhizosphere	VPEADALEQRQPLLERDTPEQVPEIDIEVPEEDALEQAMPVPFDEDDAPR
Ga0307408_1023001291	3300031548	Rhizosphere	ALEQRQPLLDGDAPEQVPEIDVEVPEEDALEQAMPVPFDEDDAPR
Ga0307405_117726731	3300031731	Rhizosphere	MTDAVPEADALEQRQPLLDPDTAEEVPEIDVEVPEEDALEQARPVPFDEDDAPR
Ga0307406_106952062	3300031901	Rhizosphere	MTDAVPEADALEQSQPLLERDVPEQVPEIDVEVPEEDALEQAMPVPFDEDDAPR
Ga0307406_109492432	3300031901	Rhizosphere	RSMTDAVPEADALEQRQSLLERDTAEQIPEIDIEVPEEDALDQAMPVPFDEDDAPR
Ga0307412_106051012	3300031911	Rhizosphere	MPDAVPEADALEQRQPLLDGDAPEQVPEIDVEVPEEDALEQAMPVPFDEDDAPR
Ga0307409_1000696375	3300031995	Rhizosphere	MTDAVPEADALEQRQPLLERDNVDQVPEIDVEVPEGDALEQAMPVPFDEDDAPR
Ga0307409_1025547291	3300031995	Rhizosphere	MTDAVPEADAVEQRQPLLDGDASEQVPEIDVEVPEEDALEQAMPVPFDEDDAPR
Ga0307416_1031822422	3300032002	Rhizosphere	MTDAVPEADALEQRQPLLEPEADEQVPEIDVEVPEEDALEQAMPVPFDEDDAPR
Ga0307416_1034794891	3300032002	Rhizosphere	TDAVPEADALEQRQPLLDRDAPEQVPEIDVEVPEEDALEQAIPVPFDEDDAPR
Ga0307411_114723741	3300032005	Rhizosphere	MTDAVPEADAVEQRQPLLDGDASEQVPEIDVEVPEEDALEQAMPVPFDEDD
Ga0326721_100192804	3300032080	Soil	MTDAVPEADALEQSQPLLDRDVPEQVPEIDVEVPEEDALEQAMPVPFDEDEAPR
Ga0307415_1010279042	3300032126	Rhizosphere	MTDAVPEADALEQRQPLLERDAPEQVPEIDVEVPEEDALEQAMPVPFDEDDAPR
Ga0268251_100040401	3300032159	Agave	MTDAVPEADALEQRQPLVDGDAPEQVPEIDVEVPEEDALEQAMPV
Ga0268251_100269702	3300032159	Agave	MTEDAVPEADAQEQRAPLLEPDAPEEPAIDDEVPEADALDQARRVPIDEDDEPR
Ga0268251_101388382	3300032159	Agave	MTDAVPEADALEQRQPLVDGDAPEQVPEIDLEVPEEDALEQAMPVPFDEDDAPR
Ga0334919_084904_75_239	3300034001	Hypolithic Biocrust	MTDAVPEADALEQSQPLLERDAPEQVPEIDLEVPEEDALEQAMPVPFDEDDAPR
Ga0334946_064335_283_447	3300034026	Sub-Biocrust Soil	MTDAVPEADAVEQGQPLLERDTPEQVPEIDVEVPEGDALEQAMPVPFDEDDAPR
Ga0334913_015157_1066_1230	3300034172	Sub-Biocrust Soil	MTEDAVPEADAQEQRTPLLDPDAPEEPAIDDEVPEADALDQARRVPIDEDDEPR
Ga0334913_092643_424_588	3300034172	Sub-Biocrust Soil	MTDAVPEADALEQRQPLLDPDASEQVPEIDLEVPEEDALEQAMPVPFDEDDAPR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F050655

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences