Metagenome / Metatranscriptome Family F050698

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F050698
Family Type	Metagenome / Metatranscriptome
Number of Sequences	145
Average Sequence Length	73 residues
Representative Sequence	MLIGMPNHANPVDEPGVNTVKCPRHDHWLYRRENIDAEPGVRWCCGVEGCAYGYDANTKGDWVRT
Number of Associated Samples	115
Number of Associated Scaffolds	145

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	27.78 %
% of genes near scaffold ends (potentially truncated)	72.41 %
% of genes from short scaffolds (< 2000 bps)	77.93 %
Associated GOLD sequencing projects	105
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.42

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (97.931 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (22.069 % of family members)
Environment Ontology (ENVO)	Unclassified (27.586 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (37.931 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 15.05% Coil/Unstructured: 84.95%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.42
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.42
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 145 Family Scaffolds
PF00118	Cpn60_TCP1	7.59
PF00881	Nitroreductase	5.52
PF13545	HTH_Crp_2	4.14
PF11154	DUF2934	3.45
PF00011	HSP20	2.07
PF13502	AsmA_2	2.07
PF00072	Response_reg	1.38
PF00196	GerE	1.38
PF01740	STAS	1.38
PF00115	COX1	1.38
PF00691	OmpA	1.38
PF13442	Cytochrome_CBB3	1.38
PF00083	Sugar_tr	1.38
PF08447	PAS_3	1.38
PF14690	zf-ISL3	0.69
PF01979	Amidohydro_1	0.69
PF07228	SpoIIE	0.69
PF00903	Glyoxalase	0.69
PF05170	AsmA	0.69
PF01227	GTP_cyclohydroI	0.69
PF00589	Phage_integrase	0.69
PF00355	Rieske	0.69
PF16360	GTP-bdg_M	0.69
PF01087	GalP_UDP_transf	0.69
PF00265	TK	0.69
PF13683	rve_3	0.69
PF04095	NAPRTase	0.69
PF01370	Epimerase	0.69
PF03450	CO_deh_flav_C	0.69
PF13282	DUF4070	0.69

COG ID	Name	Functional Category	% Frequency in 145 Family Scaffolds
COG0459	Chaperonin GroEL (HSP60 family)	Posttranslational modification, protein turnover, chaperones [O]	7.59
COG0071	Small heat shock protein IbpA, HSP20 family	Posttranslational modification, protein turnover, chaperones [O]	2.07
COG1435	Thymidine kinase	Nucleotide transport and metabolism [F]	0.69
COG1488	Nicotinic acid phosphoribosyltransferase	Coenzyme transport and metabolism [H]	0.69
COG2982	Uncharacterized conserved protein AsmA involved in outer membrane biogenesis	Cell wall/membrane/envelope biogenesis [M]	0.69

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	97.93 %
Unclassified	root	N/A	2.07 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	97.93 %
Unclassified	root	N/A	2.07 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	97.93 %
Unclassified	root	N/A	2.07 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	83.45 %
Unclassified	root	N/A	2.07 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	0.69 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.69 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	71.03 %
Unclassified	root	N/A	2.07 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	1.38 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.69 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.69 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	70.34 %
Unclassified	root	N/A	2.07 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	1.38 %
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	0.69 %
Acidobacteria bacterium 13_2_20CM_57_17	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_2_20CM_57_17	0.69 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.69 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	70.34 %
Unclassified	root	N/A	2.07 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1.38 %
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	0.69 %
Acidobacteria bacterium 13_2_20CM_57_17	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_2_20CM_57_17	0.69 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.69 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	70.34 %
Unclassified	root	N/A	2.07 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1.38 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.69 %
Acidobacteria bacterium 13_2_20CM_57_17	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_2_20CM_57_17	0.69 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.69 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459024\|GZRSKLJ02FYYC9	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	517	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_101259201	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	604	Open in IMG/M
3300001431\|F14TB_102899583	All Organisms → cellular organisms → Bacteria	1122	Open in IMG/M
3300001593\|JGI12635J15846_10035074	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3970	Open in IMG/M
3300002906\|JGI25614J43888_10037841	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1505	Open in IMG/M
3300004103\|Ga0058903_1461977	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	666	Open in IMG/M
3300004136\|Ga0058889_1433692	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	587	Open in IMG/M
3300004137\|Ga0058883_1543024	All Organisms → cellular organisms → Bacteria	940	Open in IMG/M
3300004157\|Ga0062590_100000847	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	8820	Open in IMG/M
3300004631\|Ga0058899_12304389	All Organisms → cellular organisms → Bacteria → Acidobacteria	2016	Open in IMG/M
3300005167\|Ga0066672_10880126	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	556	Open in IMG/M
3300005172\|Ga0066683_10032635	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3009	Open in IMG/M
3300005174\|Ga0066680_10021135	All Organisms → cellular organisms → Bacteria	3563	Open in IMG/M
3300005176\|Ga0066679_10057829	All Organisms → cellular organisms → Bacteria	2256	Open in IMG/M
3300005184\|Ga0066671_10070126	All Organisms → cellular organisms → Bacteria	1850	Open in IMG/M
3300005340\|Ga0070689_100977449	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	752	Open in IMG/M
3300005439\|Ga0070711_101633057	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	564	Open in IMG/M
3300005447\|Ga0066689_10824161	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	576	Open in IMG/M
3300005518\|Ga0070699_100179266	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1880	Open in IMG/M
3300005530\|Ga0070679_100081464	All Organisms → cellular organisms → Bacteria	3226	Open in IMG/M
3300005536\|Ga0070697_100007280	All Organisms → cellular organisms → Bacteria	8607	Open in IMG/M
3300005554\|Ga0066661_10084337	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1877	Open in IMG/M
3300005618\|Ga0068864_102245339	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	552	Open in IMG/M
3300006163\|Ga0070715_10752986	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	587	Open in IMG/M
3300006175\|Ga0070712_100325148	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1252	Open in IMG/M
3300006175\|Ga0070712_100415489	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1114	Open in IMG/M
3300006175\|Ga0070712_101573864	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	575	Open in IMG/M
3300006176\|Ga0070765_100202044	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1803	Open in IMG/M
3300006852\|Ga0075433_10695308	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	891	Open in IMG/M
3300006871\|Ga0075434_101423983	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	703	Open in IMG/M
3300006893\|Ga0073928_10019876	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	6957	Open in IMG/M
3300006893\|Ga0073928_10457011	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	923	Open in IMG/M
3300006914\|Ga0075436_100047580	All Organisms → cellular organisms → Bacteria	2958	Open in IMG/M
3300006914\|Ga0075436_100750575	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	725	Open in IMG/M
3300006954\|Ga0079219_11075983	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	678	Open in IMG/M
3300007258\|Ga0099793_10076172	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1524	Open in IMG/M
3300007265\|Ga0099794_10020993	All Organisms → cellular organisms → Bacteria → Acidobacteria	2963	Open in IMG/M
3300007265\|Ga0099794_10370491	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	746	Open in IMG/M
3300007265\|Ga0099794_10499346	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	640	Open in IMG/M
3300007788\|Ga0099795_10068475	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1334	Open in IMG/M
3300009012\|Ga0066710_102657404	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	717	Open in IMG/M
3300009038\|Ga0099829_10321741	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1270	Open in IMG/M
3300009088\|Ga0099830_10740384	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	810	Open in IMG/M
3300009101\|Ga0105247_10743203	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	743	Open in IMG/M
3300009137\|Ga0066709_102172784	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	766	Open in IMG/M
3300010335\|Ga0134063_10213392	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	911	Open in IMG/M
3300011120\|Ga0150983_11004733	All Organisms → cellular organisms → Bacteria → Acidobacteria	1244	Open in IMG/M
3300011120\|Ga0150983_11145273	All Organisms → cellular organisms → Bacteria → Acidobacteria	708	Open in IMG/M
3300011120\|Ga0150983_12426626	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	935	Open in IMG/M
3300011120\|Ga0150983_13170849	All Organisms → cellular organisms → Bacteria → Acidobacteria	508	Open in IMG/M
3300011120\|Ga0150983_16350119	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	643	Open in IMG/M
3300011269\|Ga0137392_10961675	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	702	Open in IMG/M
3300011271\|Ga0137393_11357701	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	600	Open in IMG/M
3300011271\|Ga0137393_11667449	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	526	Open in IMG/M
3300012096\|Ga0137389_10056568	All Organisms → cellular organisms → Bacteria	2984	Open in IMG/M
3300012096\|Ga0137389_10836041	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	790	Open in IMG/M
3300012205\|Ga0137362_11418683	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	580	Open in IMG/M
3300012211\|Ga0137377_11945109	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	505	Open in IMG/M
3300012362\|Ga0137361_10315346	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1432	Open in IMG/M
3300012362\|Ga0137361_10684246	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	938	Open in IMG/M
3300012918\|Ga0137396_10156181	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1664	Open in IMG/M
3300012922\|Ga0137394_10086732	All Organisms → cellular organisms → Bacteria	2623	Open in IMG/M
3300012927\|Ga0137416_10246742	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1457	Open in IMG/M
3300012989\|Ga0164305_11592803	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	583	Open in IMG/M
3300013306\|Ga0163162_10158540	All Organisms → cellular organisms → Bacteria → Acidobacteria	2384	Open in IMG/M
3300013306\|Ga0163162_12178298	All Organisms → cellular organisms → Bacteria → Acidobacteria	636	Open in IMG/M
3300014150\|Ga0134081_10110358	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	874	Open in IMG/M
3300015245\|Ga0137409_10045819	All Organisms → cellular organisms → Bacteria	4174	Open in IMG/M
3300015264\|Ga0137403_10049968	All Organisms → cellular organisms → Bacteria → Acidobacteria	4316	Open in IMG/M
3300015372\|Ga0132256_100453308	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1390	Open in IMG/M
3300015374\|Ga0132255_100387663	All Organisms → cellular organisms → Bacteria → Acidobacteria	2031	Open in IMG/M
3300015374\|Ga0132255_100453697	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1877	Open in IMG/M
3300016702\|Ga0181511_1040393	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	637	Open in IMG/M
3300017822\|Ga0187802_10180650	All Organisms → cellular organisms → Bacteria	809	Open in IMG/M
3300017822\|Ga0187802_10431395	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	523	Open in IMG/M
3300017930\|Ga0187825_10037361	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1640	Open in IMG/M
3300017933\|Ga0187801_10027780	All Organisms → cellular organisms → Bacteria → Acidobacteria	1968	Open in IMG/M
3300017933\|Ga0187801_10108933	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1056	Open in IMG/M
3300017942\|Ga0187808_10094389	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1297	Open in IMG/M
3300017943\|Ga0187819_10252490	All Organisms → cellular organisms → Bacteria	1032	Open in IMG/M
3300017995\|Ga0187816_10316202	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	686	Open in IMG/M
3300019882\|Ga0193713_1042834	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1309	Open in IMG/M
3300019882\|Ga0193713_1185389	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	539	Open in IMG/M
3300019887\|Ga0193729_1037808	All Organisms → cellular organisms → Bacteria → Proteobacteria	2007	Open in IMG/M
3300019888\|Ga0193751_1004743	All Organisms → cellular organisms → Bacteria	7725	Open in IMG/M
3300020010\|Ga0193749_1074308	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	631	Open in IMG/M
3300020170\|Ga0179594_10401889	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_2_20CM_57_17	520	Open in IMG/M
3300020581\|Ga0210399_10478287	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1036	Open in IMG/M
3300021046\|Ga0215015_10209274	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1056	Open in IMG/M
3300021170\|Ga0210400_10000083	All Organisms → cellular organisms → Bacteria	127381	Open in IMG/M
3300021181\|Ga0210388_11562798	All Organisms → cellular organisms → Bacteria → Acidobacteria	549	Open in IMG/M
3300021474\|Ga0210390_10178896	All Organisms → cellular organisms → Bacteria → Acidobacteria	1791	Open in IMG/M
3300022530\|Ga0242658_1108409	All Organisms → cellular organisms → Bacteria → Acidobacteria	674	Open in IMG/M
3300024179\|Ga0247695_1002031	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2953	Open in IMG/M
3300024290\|Ga0247667_1004011	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3244	Open in IMG/M
3300024330\|Ga0137417_1060229	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	971	Open in IMG/M
3300024330\|Ga0137417_1308266	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1775	Open in IMG/M
3300024347\|Ga0179591_1085854	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2780	Open in IMG/M
3300025905\|Ga0207685_10673750	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	561	Open in IMG/M
3300025914\|Ga0207671_11392600	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	544	Open in IMG/M
3300025928\|Ga0207700_10557684	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1017	Open in IMG/M
3300026285\|Ga0209438_1119228	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	745	Open in IMG/M
3300026317\|Ga0209154_1006793	All Organisms → cellular organisms → Bacteria	5796	Open in IMG/M
3300026317\|Ga0209154_1061291	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1655	Open in IMG/M
3300026325\|Ga0209152_10005449	All Organisms → cellular organisms → Bacteria → Acidobacteria	4630	Open in IMG/M
3300026482\|Ga0257172_1041671	Not Available	836	Open in IMG/M
3300026490\|Ga0257153_1069936	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	708	Open in IMG/M
3300026515\|Ga0257158_1040159	Not Available	845	Open in IMG/M
3300026524\|Ga0209690_1226238	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	588	Open in IMG/M
3300026529\|Ga0209806_1016636	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3834	Open in IMG/M
3300026557\|Ga0179587_11117549	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	519	Open in IMG/M
3300027671\|Ga0209588_1041560	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1484	Open in IMG/M
3300027671\|Ga0209588_1163629	All Organisms → cellular organisms → Bacteria → Acidobacteria	702	Open in IMG/M
3300027846\|Ga0209180_10266999	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	983	Open in IMG/M
3300027862\|Ga0209701_10140002	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1484	Open in IMG/M
3300027875\|Ga0209283_10133937	All Organisms → cellular organisms → Bacteria → Acidobacteria	1638	Open in IMG/M
3300028536\|Ga0137415_10240506	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1620	Open in IMG/M
3300030854\|Ga0075385_11717158	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	645	Open in IMG/M
3300030916\|Ga0075386_11627738	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	608	Open in IMG/M
3300030991\|Ga0073994_10008175	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1733	Open in IMG/M
3300031057\|Ga0170834_104893200	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	528	Open in IMG/M
3300031057\|Ga0170834_110140088	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	754	Open in IMG/M
3300031057\|Ga0170834_110720568	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	536	Open in IMG/M
3300031128\|Ga0170823_10579944	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	529	Open in IMG/M
3300031231\|Ga0170824_104024782	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	920	Open in IMG/M
3300031231\|Ga0170824_112202075	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	621	Open in IMG/M
3300031446\|Ga0170820_10210871	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	652	Open in IMG/M
3300031446\|Ga0170820_10691070	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	652	Open in IMG/M
3300031446\|Ga0170820_11864738	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	670	Open in IMG/M
3300031446\|Ga0170820_11947953	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	855	Open in IMG/M
3300031474\|Ga0170818_113171453	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1222	Open in IMG/M
3300031708\|Ga0310686_113474816	All Organisms → cellular organisms → Bacteria	7025	Open in IMG/M
3300031715\|Ga0307476_10095076	All Organisms → cellular organisms → Bacteria	2097	Open in IMG/M
3300031716\|Ga0310813_12242043	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	517	Open in IMG/M
3300031720\|Ga0307469_11740673	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	601	Open in IMG/M
3300031754\|Ga0307475_10067621	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2723	Open in IMG/M
3300031754\|Ga0307475_10133055	All Organisms → cellular organisms → Bacteria	1965	Open in IMG/M
3300031962\|Ga0307479_10047034	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4146	Open in IMG/M
3300031962\|Ga0307479_10068418	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3426	Open in IMG/M
3300032119\|Ga0316051_1003319	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1111	Open in IMG/M
3300032120\|Ga0316053_102284	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1080	Open in IMG/M
3300032174\|Ga0307470_10896970	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	696	Open in IMG/M
3300032180\|Ga0307471_100788913	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1117	Open in IMG/M
3300032205\|Ga0307472_100905425	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	817	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	91.72%
Host-Associated	Host-Associated	8.28%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	84.14%
Plants	Host-Associated → Plants	8.28%
Aquatic	Environmental → Aquatic	7.59%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	84.14%
Freshwater	Environmental → Aquatic → Freshwater	6.21%
Rhizosphere	Host-Associated → Plants → Rhizosphere	4.83%
Rhizoplane	Host-Associated → Plants → Rhizoplane	3.45%
Thermal Springs	Environmental → Aquatic → Thermal Springs	1.38%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	67.59%
Loam	Environmental → Terrestrial → Soil → Loam	16.55%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	6.21%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	4.14%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.07%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	1.38%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.38%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.69%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	31.72%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	22.76%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	11.72%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	8.28%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	7.59%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	5.52%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	4.14%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.07%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	1.38%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.38%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.38%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	0.69%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.69%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.69%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	22.07%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	8.97%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	8.97%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	7.59%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	7.59%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	7.59%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	6.21%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	6.21%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	5.52%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.76%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.76%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	1.38%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.38%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.38%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.38%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	0.69%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grass Soil	0.69%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.69%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.69%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.69%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.69%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.69%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.69%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.69%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.69%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.69%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.69%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459024	Grass soil microbial communities from Rothamsted Park, UK - FD1 (NaCl 300g/L 5ml)	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300001431	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.4TB clc assemly	Environmental	Open in IMG/M
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300002906	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_60cm	Environmental	Open in IMG/M
3300004103	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF242 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004136	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF214 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004137	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF202 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004631	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF234 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005184	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120	Environmental	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005530	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300007788	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300010335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300014150	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016702	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_30_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300017822	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2	Environmental	Open in IMG/M
3300017930	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_5	Environmental	Open in IMG/M
3300017933	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_1	Environmental	Open in IMG/M
3300017942	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_3	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300017995	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_1	Environmental	Open in IMG/M
3300019882	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H3a2	Environmental	Open in IMG/M
3300019887	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c2	Environmental	Open in IMG/M
3300019888	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1c2	Environmental	Open in IMG/M
3300020010	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1s2	Environmental	Open in IMG/M
3300020170	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021046	Soil microbial communities from Shale Hills CZO, Pennsylvania, United States - 90cm depth	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300022530	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300024179	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK36	Environmental	Open in IMG/M
3300024290	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK08	Environmental	Open in IMG/M
3300024330	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300024347	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300025905	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025914	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026285	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_20cm (SPAdes)	Environmental	Open in IMG/M
3300026317	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121 (SPAdes)	Environmental	Open in IMG/M
3300026325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107 (SPAdes)	Environmental	Open in IMG/M
3300026482	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-16-B	Environmental	Open in IMG/M
3300026490	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-10-A	Environmental	Open in IMG/M
3300026515	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-03-A	Environmental	Open in IMG/M
3300026524	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150 (SPAdes)	Environmental	Open in IMG/M
3300026529	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152 (SPAdes)	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027671	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027862	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300030854	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - OB2 SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030916	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA12 EcM (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030991	Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Soil GP-1A (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031128	Oak Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032119	Metatranscriptome of soil microbial communities from Bohemian Forest, Czech Republic ? CSE5 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300032120	Metatranscriptome of spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZA5 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
FD1_03409330	2170459024	Grass Soil	DGYYTLLGMPNHTYSVEEPGVNTVKCSGHDHWLYRRESIDAEPGVRWCCGVEGCDYGYDANTKGDWVRT
INPhiseqgaiiFebDRAFT_1012592012	3300000364	Soil	DHASYHCRNSGCSVRFNSTDGYYMLMGMPGHTYAVEEPGANTEKCPMHDRWLYRRQNIDVEPGVRWCCGAEGCDYGYDAKTKGDWVRT*
F14TB_1028995832	3300001431	Soil	MLIGMPSHAYSVDEPGVNTMKCPIHGRWMYRRKNIDAEPRIRWFCSVEDCHYGYAAQKMRPSNPTR*
JGI12635J15846_100350744	3300001593	Forest Soil	MLIGMPNHANPVDEPGVNTVKCPRHDHGLYRRENIDAEPGVRWCCGVEGCAYGYDSNTKGDWVRT*
JGI25614J43888_100378412	3300002906	Grasslands Soil	DGYYMLIGMPGHANPVDEPGVNIAKCPRHDHWLYRRRNIDLGPGFGWCCGVEGCDYRHNTN*
Ga0058903_14619771	3300004103	Forest Soil	IGMPDHANPVDEPGVNTTKCPKHGYWLYRRQNIDRETGVDWCCGVKDCDYPNAANTNTAELRTQ*
Ga0058889_14336922	3300004136	Forest Soil	QASYHCGFEGCSVRYDGTDGYYMLIGMPEHANPVDEPGVNLAKCPRHGRWLYRRENAKVGTGFGWFCGVEGCDYRYDAT*
Ga0058883_15430243	3300004137	Forest Soil	CGFEGCSVRYDGTDGYYMLIGMPEHANPVDEPGVNLAKCPRHGRWLYRRENAKVGPGFGWFCGVEGCDYRYDAT*
Ga0062590_1000008479	3300004157	Soil	AGFKANLGDQASYHCGFEGCSVRYDAIDGYYMLIGMPGHANTVDEPGVNTLKCPVHGRWLYRQQNIETEPGVGWRCGVEDCRYSYTADSKGDWVRT*
Ga0058899_115144791	3300004631	Forest Soil	CGFEGCSVRYDATDGYHMLIGMPDHANPVDEPGINTAKCPSHNRWLYRRENIHSEPGVDWRCSVGGCDYRYSGSVRGDSVRT*
Ga0058899_123043892	3300004631	Forest Soil	MKYESRRSRSNAENQASYHCGFEGCSVRYDSTNGYYMLIGMPDHANPVDEPGVNIVKCPRHNHWLYRRQNAGAQTGVRWCCGVEGCDYAYNAQAKGHRIKLQQSV*
Ga0066672_108801261	3300005167	Soil	SRSNAGHQASCHCGFEGCSVRYDPTDGYYMLIGMPNHANPVDEPGANTVKCRRHDHWLYRRENIHAEPGVGWSCGVEGCDYGHYANTKGDWVRT*
Ga0066683_100326355	3300005172	Soil	MLIGMPDHANAVDEPGVNTARCPIHGRWLYRREDIEAQAGVRWLCGVEGCDYRYSANTKADWVRT*
Ga0066680_100211353	3300005174	Soil	MLIGMPGHAYAVDEPGVNTMKCPIHGRWLYRRENIDAEPRVRWFCGVEDCHYGYLADTKGDWVRT*
Ga0066679_100578293	3300005176	Soil	MLIGMPNHANPVDEPGANTVKCRRHDHWLYRRENIHAEPGVGWSCGVEGCDYGHYANTKGDWVRT*
Ga0066671_100701261	3300005184	Soil	TDGYYMLIGMPDHANAVDEPGVNTARCPIHGRWLYRRENIEAEAGVRWLCGVEGCDYRYSANTKAEWVRT*
Ga0070689_1009774492	3300005340	Switchgrass Rhizosphere	NSGNLASYHCGSVGCSVRYNSTAGYYMLMGMSGHAYALDEPGVNTVKCPIHGRWLYRRENIGAEPRVRWFCGVEGCHHGYIADTMGDWVRT*
Ga0070711_1016330572	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	GCSVRYNSTAGYYMLIGMPDHACVVDEPGVNTMKCPIHGRWLYRRKNTDAESRVRWFCSVEDCHYGYLADTKGIGSELKLNSRP*
Ga0066689_108241611	3300005447	Soil	YMLIRMPDHANPVDEPGVNTMTCPRHGCWLYLRENVAAKPGAVWCCGVEGCDYCYHANTKGDWLRA*
Ga0070699_1001792661	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	GGSRANTGHFASYHCGSAGCSVRYNSTAGYHVLFGMPGHAYAVDEPGVNTVKCPIHGRWLYRRKNIDAEPRVRWFCGVEDCRYGYIANTKYEWVRA*
Ga0070679_1000814641	3300005530	Corn Rhizosphere	LIGMPDHANAVDEPGVNTMTCPRHSCWLYRRENVAAKPGAVWCCGVEGCDYRYQANTKGDWLRA*
Ga0070697_1000072801	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	SNKAGNQAAYHCGFMGCSVRYNLVDGYYMLIGMPDHANAVDEPGVNTMTCPRHSCWLYRRENVAAKPGAVWCCGVEGCDYRYQANTKGDWLRA*
Ga0066661_100843373	3300005554	Soil	MLIGMPNHANPVDEPGVNTVKCPRHDHWLYRRENIHAEPGVGWSCGVEGCDYGHYANTKGDWVRT*
Ga0068864_1022453391	3300005618	Switchgrass Rhizosphere	ANTVDEPGVNTLKCPIHGRWLYRQQNIETEAGVGWRCGVEDCHYSYTADSKGDWVRT*
Ga0070715_107529861	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	RANIGRLASYHCGSVGCSVRYNSTDGYYMLFGMPNHTYSVEEPGVNTVKCSRHDHWLYRRENIDAEPGVRWCCGVEGCDYGYDANTKGDWVRT*
Ga0070712_1003251483	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	STAGYHMLFGMPGHAYAVDEPGVNTMKCPTHGHWLYRRKNIDAEPRIRWFCGVEDCHYRYIANSKYEWGRV*
Ga0070712_1004154892	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	KANTGDQASYHCGFGGCSVRYDATDGYYMLIGMPGHANTVDEPGVNTLKCPIHNRWLYRQQNIETEPGVGWRCGVESCHYSYIADSKGDWLRT*
Ga0070712_1015738641	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	GAAFDITQPLDNMLIGMPDHACVVDEPGVNTMKCPIHGRWLYRRKNTDAESRVRWFCSVEDCHYGYLADTKGIGSELKLNSRP*
Ga0070765_1002020443	3300006176	Soil	MLMGRPGHTYAVDEPGVNTVKCPRHNYWLYRRENIDAEPGVRWCCGVEGCDYGYDANTKGDWVRT*
Ga0075433_106953082	3300006852	Populus Rhizosphere	VRYDATDGYYMLIGMPGHANAVDEPGVNTLKCPVHGRWLYRQQNIETEPGVGWRCGVEGCHYSYIADSKGNWVRT*
Ga0075434_1014239831	3300006871	Populus Rhizosphere	YDATDGYYMLIGMPGHANAVDEPGVNTLKCPVHGRWLYRQQNIETEPGVGWRCGVEGCHYSYIADSKGNWVRT*
Ga0073928_100198762	3300006893	Iron-Sulfur Acid Spring	MLIGMAGHAYAVDEPGVNTVKCPKHGRWLYRRENIDAEARVRWFCGVEGCRYGYLANTKGDWVRT*
Ga0073928_104570112	3300006893	Iron-Sulfur Acid Spring	MLIGMPDHANAVDEPGVNTVKCPIHGRWLYRRENIEAEPGVRWFCGVEGCDYGYNANTKGDWVWT*
Ga0075436_1000475802	3300006914	Populus Rhizosphere	MLIGMPDHACVVDEPGVNTMKCPIHGRWLYRRKNTDAESRVRWFCGVEDCHYGYLADAKAIRSGPKVDFRP*
Ga0075436_1007505751	3300006914	Populus Rhizosphere	SAGFKANTGDQASYHCGFEGCSVRYDATDGYYMLIGMPGHANAVDEPGVNTLKCPVHGRWLYRQQNIETEPGVGWRCGVEGCHYSYIADSKGNWVRT*
Ga0079219_110759831	3300006954	Agricultural Soil	SSTDGYYMLIGMPDHANAVDEPGVNTARCPVHGRWLYRREDLGAEVGIRWLCGVAGCDYRYRANTKAEWVRT*
Ga0099793_100761722	3300007258	Vadose Zone Soil	MLIGMPGHANTVDEPGVNTVKCPRHDHWLYRRQKIDAERGVRWSCGVEGCDYGYDGDTKGDWVRTW*
Ga0099794_100209931	3300007265	Vadose Zone Soil	IDGYYMLIGMPGHANPVDEPGVNIAKCPRHDHWLYRRRNIDLGPGFGWCCGVEGCDYRHNTN*
Ga0099794_103704911	3300007265	Vadose Zone Soil	STDGYYMLIGMPGHANPVDEPGVNTVKCPRHDHWLYRRQKIDAERGVRWSCGVEGCDYGYDADTKGDWVRT*
Ga0099794_104993461	3300007265	Vadose Zone Soil	IGMPNHANPVDEPGVNTVKCPRHDHWLYRRENIDAEPGVRWCCGVEGCAYGYDANTKGDWVRT*
Ga0099795_100684752	3300007788	Vadose Zone Soil	MLIGMRGHANPVDEPGVNTVKCPRHDHWLYRRQKIDAERGVRWSCGVEGCDYGYDANTKGDLVRT*
Ga0066710_1026574042	3300009012	Grasslands Soil	ANTGHLASYHCGSAGCSVRYNSTAGYYMLFGMPGHAYAVDEPGVNTMKCPTHDRWLYRRKNIDAEPRVRWFCGVEDCHYGYIGRPLLH
Ga0099829_103217412	3300009038	Vadose Zone Soil	GSWSNAENQASYHCGFEGCSVRYNSTDGYYMLIGMPNHANPVDEPGVNTVKCPRHDHWLYRRQKIDAEPGVDWWCGVEGCDYGYNANTKGDWVRT*
Ga0099830_107403841	3300009088	Vadose Zone Soil	WSNAENQASYHCGFEGCSVRYNSTDGYYMLIGMPGHANPVDEPGVNTVKCPRHDHWLYRRQKIDAERGVRWSCGVEGCDYGYDADTKGNWVRT*
Ga0105247_107432032	3300009101	Switchgrass Rhizosphere	GSVGCSVRYNSTAGYYMLMGMPGHAYALDEPGVNTMKCPIHGRWLYRQENIGAEPRVRWFCGVEGCHHGYIANTKGDWVRT*
Ga0066709_1021727841	3300009137	Grasslands Soil	MKYESGDSRANTGDHASYHCGYIGCSLRYDATDGYYTLMGTPDHTYAVDEPGVNTFKCPKHGHWLYRRVDIDAEAGVRWCCGVK
Ga0134063_102133921	3300010335	Grasslands Soil	ATAGYYMLFGMPGHAYAVDEPGVNTMKCPIHGRWLYRRKNIDAEPRVRWFCGVEDCRYGYIANTKYEWVRG*
Ga0150983_110047333	3300011120	Forest Soil	DATDGYYMLIGMPDHANPVDEPGVNTAKCPNHGHWLYRRKKAARETGIDWCCGVEGCDYRNNANTESAGPRV*
Ga0150983_111452732	3300011120	Forest Soil	LIGMPKHANPIDEPGVNVAQCPRHGRWLYRRKNVEPGPAFNWCCGVEGCDYRSAAA*
Ga0150983_124266261	3300011120	Forest Soil	HCGFEGCSVRYDSTNGYYMLIGMPDHANPVDEPGVNMVKCPRHNHWLYRRQNAGAQTGVRWCCGVEGCDYAYNAQAKGHRIKLQQSV*
Ga0150983_131708491	3300011120	Forest Soil	GYYMLIGMPEHANPVDEPGVNVAKCPRHGRWLYRRENAELGPGFGWCCSVEGCDYRYHAT
Ga0150983_163501191	3300011120	Forest Soil	NQASYHCGFEGCSVRYDGTDGYYMLIGMPEHANPVDEPGVNLAKCPRHGRWLYRRENAKLGPGFGWFCGVEGCDYRYDAT*
Ga0137392_109616751	3300011269	Vadose Zone Soil	NSTDGYYMLIGMPNHANPVDEPGVNTVKCPRHDHWLYRRQKIDAEPGVDWWCGVEGCDYGYNANTKGDWVRT*
Ga0137393_113577011	3300011271	Vadose Zone Soil	GCSVRYNSTDGYYMLIGMPGHANPVDEPGVNTVKCPRHDHWLYRREKVDAERGVRWSCGVEGCDYGYDADTKGDWVRT*
Ga0137393_116674491	3300011271	Vadose Zone Soil	SVRYNSTDGYYMLIGMPGHANPVDEPGVNTVKCPRHDHWLYRRQKIDAEPGVDWWCGVEGCDYGYNANTKGDWVRT*
Ga0137389_100565682	3300012096	Vadose Zone Soil	MLVGMPDHANAVDEPGVNTVKCPIHGRWLYRRENVEGEPGVRWFCGVEGCDYGYIANTKGDWVRT*
Ga0137389_108360411	3300012096	Vadose Zone Soil	PGHANPVDEAGVNAVKCPRDDHWLYRRQKIDAEPGVDWWCGVEGCDYGYNANTKGDWVRT
Ga0137362_114186831	3300012205	Vadose Zone Soil	ENQASYHCGFEGCSVRYNSTDGYYMLIGMPGHANTVDEPGVNTVKCPRHDHWLYRRQKIDAERGVRWSCGVEGCDYGYDGDTKGDWVRTW*
Ga0137377_119451091	3300012211	Vadose Zone Soil	CSVRYNSTDGYYMLIGMPGHAYAVDEPGVNTMKCPIHGRWLYRRENIDAEPRVRWFCGVEDCHYGYLADTKGDWVRT*
Ga0137361_103153462	3300012362	Vadose Zone Soil	ATDGYYMLIGMPGHANPVDEPGVNIAKCPRHDHWLYRRRNIDLGPGFGWCCGVEGCDYRHNTN*
Ga0137361_106842463	3300012362	Vadose Zone Soil	SVRYNSTDGYYMLIGMPGHANPVDEPGVNTVKCPRHDHWLYRRQKIDAERGVRWSCGVEGCDYGYDADTKGNWVRT*
Ga0137396_101561813	3300012918	Vadose Zone Soil	MLIGMPGHANTVDEPGVNTVKCPRHDHWLYRRQKIDAERGVRWSCGVEGCDYGYDADTKGDWVRTW*
Ga0137394_100867322	3300012922	Vadose Zone Soil	MLIGMPDHAYAVDEPGVNTMKRPIHGRWLYRRKNTDAESRVRWFCSVKDCHYGYVTNTKAIGSGPKVNSRP*
Ga0137416_102467422	3300012927	Vadose Zone Soil	MLIGMPGHANTVDEPGVNTVKCPRHDHWLYRRQKIDAERGVRWSCGVEGCDYGY
Ga0164305_115928031	3300012989	Soil	GWIGCSVRYDSTDGYYMLVGMLDHANAVDEPGVNTVKCPIHSRWLYRRENIEAEPGVRWFCGVEGCDYSYIANTKGDWVRT*
Ga0163162_101585403	3300013306	Switchgrass Rhizosphere	MLMGMSGHAYALDEPGVNTVKCPIHGRWLYRRENIGAEPRVRWFCGVEGCHHGYIADTMGDWVRT*
Ga0163162_121782982	3300013306	Switchgrass Rhizosphere	GYYMLIGMPGHANTVDEPGVNTLKCPIHGRWLYRQQNIETEAGVGWRCGVESCDYIYFADSKGDWVRT*
Ga0134081_101103582	3300014150	Grasslands Soil	VDEPGVNTARCPIHGRWLYRREDIEAQAGVRWLCGVEGCDYRYSANTKADWVRT*
Ga0137409_100458192	3300015245	Vadose Zone Soil	MLIGMPDHAYAVDEPGVNTMKCPIHGRWLYRRKNTDAESRVRWFCSVKDCHYGYVTNTKAIGSGPKVNSRS*
Ga0137403_100499681	3300015264	Vadose Zone Soil	MLFGMPGHAYAVDEPGVNIMKCPIHGHWLYRRKNIDAEPHVRWFCGVEDCRYGYIANTKYEWVRA*
Ga0132256_1004533082	3300015372	Arabidopsis Rhizosphere	MLIGMPGHANTVDEPGVNTLKCPIHGRWLYRQQNIETEAGVGWRCGVESCDYIYFADSKGDWVRT*
Ga0132255_1003876633	3300015374	Arabidopsis Rhizosphere	VRYNSTAGYYMLMGMSGHAYALDEPGVNTVKCPIHGRWLYRRENIGAEPRVRWFCGVEGCHHGYIADTMGDWVRT*
Ga0132255_1004536973	3300015374	Arabidopsis Rhizosphere	MKYESAGVKANTGDQASYHCGFGGCSVRYDATDGYYMLIGMPGHANTVDEPGVNTLKCPIHNRWLYRQQNIETEPGVGWRCGVESCHYSYIADSKGDW
Ga0181511_10403931	3300016702	Peatland	MGMPGQTYTIEEPGVNTLQCPIHGRWLYRQKNVDADRGARWSCGIQGCDYGYDAKTKGDWVRT
Ga0187802_101806502	3300017822	Freshwater Sediment	GYYMLMGIPNHTYAIDEPGINTLKCPRHGHWLYRQKNIDAEPGVSWCCNVEGCDYTMRG
Ga0187802_104313951	3300017822	Freshwater Sediment	GSRANTGDLASYHCGYVGCSVRYNSTDGYYTLMGMPGHTYTVEEPGVNTVKCPIHGRWLDRRQNMDAERGVQQWSCAVEGCE
Ga0187825_100373611	3300017930	Freshwater Sediment	PRENHVMKYESSHSRSNPGDEASYHCGLEGCSVRYNSTDGYYMLIGMPDHVNLVDEPGANILMCPRHHQWMYRRVIDAEPGVCWFCGVGSCDYRMRG
Ga0187801_100277801	3300017933	Freshwater Sediment	MLMGMPGHTYAVDEPGVNTLKCPIHGRWLYRQQNIDTEPGVRWCCSVEGCDYGYDAKTKGDWVRT
Ga0187801_101089332	3300017933	Freshwater Sediment	VRYNSSDGYYTLMGMPGHTYTVDEPGVNTVKCPRHNHWLYRRENIDAEPGVRWCCGVEGCDFGYDANTKGDWVRT
Ga0187808_100943892	3300017942	Freshwater Sediment	KYESGGSRANTGDRASYHCGYVGCSVRYNSTAGYYMLMGNPNHTYAVEEPGTNTLKCPIHDDWLYRRKNIVAEPGVVWCCGVEGCDYRMRG
Ga0187819_102524902	3300017943	Freshwater Sediment	YNSFDGYYTLMGIAGHTYTVDEPGVNTVTCPRHGYWLYRVNIKAEAGVRWGCGVQGCDYR
Ga0187816_103162022	3300017995	Freshwater Sediment	VGCSVRYNSTDGYYTLMGMPGHTYTVEEPGVNTVKCPRHNQWLYRRENIDAEPGVRWCCGVEGCDYGYDAKTKGNWVPD
Ga0193713_10428343	3300019882	Soil	MLIGMAGHAYAVDEPGVNTVKCPKHGRWLYRRENIDAEARVRWFCGVEDCRYGYLADTKG
Ga0193713_11853891	3300019882	Soil	MLVGMPDHANAVDEPGVNTVKCPIHGRWLYRRENIETEPGVRWFCGVEGCDYGYITNTKGDWVRT
Ga0193729_10378082	3300019887	Soil	MLIGMAGHAYAVDEPGVNTVKCPKHGRWLYRRENIDAEARVRWFCGVEGCRYGYLANTKGDWVRT
Ga0193751_10047434	3300019888	Soil	MLIGMPDHANAVDDPGVNTVKCPIHGRWLYRRENIEAEPGVRWFCGVEGCDYGYNANTKGDWVWT
Ga0193749_10743082	3300020010	Soil	VRYNSTDGYYMLIGMAGHAYAVDEPGVNTVKCPKHGRWLYRRENIDAEARVRWFCGVEGCRYGYLANTKGDWVRT
Ga0179594_104018892	3300020170	Vadose Zone Soil	AYGVDEPGANTMKCPIHGRWLYRRKNTDVGLRIRWFCGVEDCYYGYFANTKDDWIRS
Ga0210399_104782873	3300020581	Soil	TDGYYTLLGMPNHTYSVEEPGVNTLKCSGHDHWLYRRVNIDAEPGVRWCCGVEGCDYGYDANTKGDWVRT
Ga0215015_102092741	3300021046	Soil	MLIGMSGHAYAVDEPGVNTMKCPIHGRWLYRRKNIDAEPRVRWFCGVEDCHYGYIADTNGDWGRT
Ga0210400_1000008390	3300021170	Soil	MLIGMPDHAHSVDEPGVNTMKCPIHGRWLYRRKNTDAEPRVRWFCSIEDCHYGYLADIKAIRSGPRANSRP
Ga0210388_115627982	3300021181	Soil	MGMPGHTYAVEESGVNTEKCPIHDRWLYRRHSIDVEPGVRWCCGVEGCDYGYDGKTKGDWIRT
Ga0210390_101788962	3300021474	Soil	MGVPGHTYAVDEPGVNTVKCPRHNYWLYRRENIDAEPGVRWCCGVEGCDHGYDANTKGDWVRT
Ga0242658_11084091	3300022530	Soil	YYMLMGMPGHTYVVEEPGVNTEKCPIHDRWLYRRHSIDVEPGVRWCCGVEGCDYGYDGKTKGDWIRT
Ga0247695_10020312	3300024179	Soil	MLIGMPDHACVVDEPGVNTMKCPIHGRWLYRRKNTDAESRVRWFCSVEDCHYGYLADTKGVGSELKVNSRP
Ga0247667_10040111	3300024290	Soil	TAGYYMLIGMPDHACVVDEPGVNTMKCPIHGRWLYRRKNTDAESRVRWFCSVEDCHYGYLADTKGVGSELKVNSRP
Ga0137417_10602293	3300024330	Vadose Zone Soil	GCSVRYNSTDGYYMLIGMPGHANPVDEPGVNTVRCPRHDHWLYRRQKIDAERGVRWSCGVEGCDYGYDADTKGDWVRT
Ga0137417_13082661	3300024330	Vadose Zone Soil	FEGCSVRYNSTDGYYMLIGMPGHANPVDEPGVNTVRCPRHDHWLYRRQKIDAERGVRWSCGVEGCDYGYDADTKGDWVRT
Ga0179591_10858546	3300024347	Vadose Zone Soil	MLIGMPGHAYAVDEPGVNTVKCPIHGRWLYRQKNIDAEPRVRWFCGVEGCHYGYTVNTKGDWVRT
Ga0207685_106737501	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	GGCSVRYNSTDGYYTLLGMPNHTYSVEEPGVNTVKCSGHDHWLYRRENIDAEPGVRWCCGVEGCDYGYDANTKGDWVRT
Ga0207671_113926002	3300025914	Corn Rhizosphere	YDATDGYYMLIGMPGHANTVDEPGVNTLKCPIHGRWLYRQQSIQTEPGVGWRCGVEDCHYSYTADSKGDWVRT
Ga0207700_105576841	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MLIGMPDHACVVDEPGVNTMKCPIHGRWLYRRKNTDAESRVRWFCSVEDCHYGYL
Ga0209438_11192283	3300026285	Grasslands Soil	VGCSVRYNSTAGYYMLIGMPDHAYAVDEPGVNTMKCPIHGRWLYRRENTDAESRVRWFCSVKDCHYGYVTSTKAIGSGPKVNSRP
Ga0209154_10067931	3300026317	Soil	QAAYHCGFMGCSVRYNLVDGYYMLIGMPDHANPVDEPGVNTRTCPRHGCWLYRRENVTAKPGALWCCGVEGCDYRYQANTKGDWVRT
Ga0209154_10612911	3300026317	Soil	MLIGMPNHANPVDEPGANTVKCRRHDHWLYRRENIHAEPGVGWSCGVEGCDYGHYANTKGDWVRT
Ga0209152_100054491	3300026325	Soil	YNLVDGYYMLIGMPDHANPVDEPGVNTRTCPRHGCWLYRRENVTAKPGALWCCGVEGCDYRYQANTKGDWVRT
Ga0257172_10416711	3300026482	Soil	VDEPGVNTVKCPRHDHWLYRRENIDAEPGVRWCCGVEGCAYGYDANTKGDWVRT
Ga0257153_10699361	3300026490	Soil	MADHANAVDEPGVNTVKCPIHGRWLYRRENVEGEPGVRWFCGVEGCDYGYIANTKGDWVR
Ga0257158_10401591	3300026515	Soil	YYMLIGMPNHANPVDEPGVNTVKCPRHDHWLYRRENIDAEPGVRWRRGVEGCGYGYDANTKGDWVRT
Ga0209690_12262381	3300026524	Soil	LIGMPGHAYAVDEPGVNTMKCPIHGRWLYRRENIDAEPRVRWFCGVEDCHYGYLADTKGDWVRT
Ga0209806_10166361	3300026529	Soil	SSRSNAGHQASCHCGFEGCSVRYDPTDGYYMLIGMPNHANPVDEPGANTVKCRRHDHWLYRRENIHAEPGVGWSCGVEGCDYGHYANTKGDWVRT
Ga0179587_111175492	3300026557	Vadose Zone Soil	MLVGMPDHANAVDEPGVNTVKCPIHGRWLYRRKNIDAEPRVRWFCGVEDCHYRYIANSKYEWVRA
Ga0209588_10415601	3300027671	Vadose Zone Soil	IDGYYMLIGMPGHANPVDEPGVNIAKCPRHDHWLYRRRNIDLGPGFGWCCGVEGCDYRHNTN
Ga0209588_11636292	3300027671	Vadose Zone Soil	YMLIGMPDHANPVDEPGVNIAKCPRHGRWLYRRRNVDSESGVGWSCGVEGCDYRYGANTNGDRFKTS
Ga0209180_102669992	3300027846	Vadose Zone Soil	SNAENQASYHCGFEGCSVRYNSTDGYYMLIGMPNHANPVDEPGVNTVKCPRHDHWLYRRQKIDAEPGVDWWCGVEGCDYGYNANTKGDWVRT
Ga0209701_101400021	3300027862	Vadose Zone Soil	ASYHCGFEGCSVRYNSTDGYYMLIGMPGHANPVDEPGVNTVKCPRHDHWLYRRQKIDAERGVRWSCGVEGCDYGYDADTKGNWVRT
Ga0209283_101339374	3300027875	Vadose Zone Soil	PVDEPGVNTVKCPRHDHWLYRRQKIDAEPGVDWWCGVEGCDYGYNANTKGDWVRT
Ga0137415_102405062	3300028536	Vadose Zone Soil	MLIGMPGHANPVDEPGVNTVKCPRHDHWLYRRQKIDAERGVRWSCGVEGCDYGYDADTKGNWVRT
Ga0075385_117171581	3300030854	Soil	MLIGMPGHAYAVDEPGVNTVKCPTHGRWLYRRENIDAEPQVRWFCGVEGCRYGYLANTKGDWVRT
Ga0075386_116277382	3300030916	Soil	YESRGSRAKTGDHASYHCGCSGCSVRFNSTDGYYMLMGMPGHTYAVEEPGVNTEKCPIHDRWLYRRHNIDVEPGVRWCCGVEGCDYGYDAKTKGDWIRT
Ga0073994_100081752	3300030991	Soil	MLIGMPNHANPVDEPGVNTVKCPRHDHWLYRRENIDAEPGVRWCCGVEGCAYGYDANTKGDWVRT
Ga0170834_1048932002	3300031057	Forest Soil	YMLMGMPGHTYAVEEPGVNTEKCPIHDRWLYRRHSIDVEPGVRWCCGVEGCDYGYDAKTKGDWIRI
Ga0170834_1101400882	3300031057	Forest Soil	YHCGSGGCSVRYNSTDGYYTLLGMPNHTYSVEEPGVNTVKCSGHDHWLYRRENIDAEPGVRWCCGVEGCDYGYDANTKGDWVRT
Ga0170834_1107205681	3300031057	Forest Soil	DGYYMLMGMPGHTYAVEEPGVNTEKCPIHDRWLYRRHNIDVEPGVRWCCGVEGCDYGYDAKTKGDWVRT
Ga0170823_105799442	3300031128	Forest Soil	YNSTDGYFMLIGIAGHAYAVDEPGVNTVKCPTHGRWLYRRENIDAEPQVRWFCGVEGCRYGYLANTKGDWVRT
Ga0170824_1040247821	3300031231	Forest Soil	ADGYFMLMGMPDHTYALDEPGVNTLKCPIHGRWLYRRENIDAEPRVRWFCSVEGCKFGYAANSKW
Ga0170824_1122020752	3300031231	Forest Soil	MLMGMPGHTYAVEEPGVNTEKCPIHDRCLYRRHSIDVEPGVRWCCGVEGCDYGYDAKTKGDWIR
Ga0170820_102108712	3300031446	Forest Soil	ASYHCASTGCSVRYNATDGYYMLMGMPVHPYAVDEPGVNTVTCPIHGRWLYRQQNIDAEPGVHWSCGVEGCDYGYDANTKGDWVRT
Ga0170820_106910701	3300031446	Forest Soil	HCGSGGCSVRYNSTDGYYTLLGMPNHTYSVEEPGVNTVKCSRHDHWLYRRENIDAEPGARWCCGVEGCDYGYDANTKGDWVRT
Ga0170820_118647381	3300031446	Forest Soil	ADGYFMLMGMPDHTYALDEPGVNTLKCPIHGRWLYRRENIDAEPRVRWFCSVEGCEFGYAANSKG
Ga0170820_119479532	3300031446	Forest Soil	MLMGMPGHTYAVEEPGVNTEKCPIHDRWLYRRHNIDVEPGVRWCCGVEGCDYGYDAKTKGDWVRT
Ga0170818_1131714533	3300031474	Forest Soil	VRYNPADGYFMLMGMPDHTYALDEPGVNTLKCPIHGRWLYRRENIDAEPRVRWFCSVEGCEFGYAANSKG
Ga0310686_1134748168	3300031708	Soil	AYHCGFMDCSVRYNLVDGYYMLIGMPDHANPVDEPGVNTRTCPRHGCWLYRRENVAAQPGALWCCGVEGCDYRYQANTKGDWIRT
Ga0307476_100950761	3300031715	Hardwood Forest Soil	AGYYMLIGTSGHAYAVDEPGVNTMMCPIHGRWLYRRKSIDAEPRVRWFCGVEDCHYGYISDTNPENS
Ga0310813_122420431	3300031716	Soil	VRYNLVDGYYMLIGMPDHANPVDEPGVNTMTCPRHSCWLYRRENVAAKPGAVWCCGVEGCDYRYQANTKGDWLRA
Ga0307469_117406732	3300031720	Hardwood Forest Soil	VRYDGTDGYYMLIGMPEHANPVDEPGVNVAKCPRHGRWLYRRRNIELGPGFGWCCGVDGCDYRYAANKKEDQVRIH
Ga0307475_100676213	3300031754	Hardwood Forest Soil	MLIGMPDHANAVDEPGVNTVKCPIHGRWLYRRENIKAEPGVRWFCAVEGCDYGYNANTKGHWVGSGGFALIRH
Ga0307475_101330551	3300031754	Hardwood Forest Soil	GHAYAVDEPGVNTMMCPIHGRWLYRRKSIDAEPRVRWFCGVEDCHYGYIADTNPENS
Ga0307479_100470343	3300031962	Hardwood Forest Soil	MLIGMPDHANPLDEPGVNTMRCPRHDHWLYRRENIHAEPGIDWCCGVEGCDYRFLAGREKSGNAATNR
Ga0307479_100684184	3300031962	Hardwood Forest Soil	MLVGMTDHTYAVDEPGVNTMRCPTHGRWLYRRENIDAEPGVRWCCGVEGCDYGYDAKTKGDWVRT
Ga0316051_10033191	3300032119	Soil	MLMGMPGDAYGVDEPGVNTVKCPIHGGWLYRRQNIDAEPGVHWSRSVGGCDYGYDANTKGNWVRT
Ga0316053_1022842	3300032120	Soil	MLMGMPGDAYGVDEPGVNTVKCPIHGGWLYRRQNIDAEPGVHWSRSVGGCDYGYDANTKGDWVRT
Ga0307470_108969701	3300032174	Hardwood Forest Soil	SYHCGSSGCSVRYNSTVGYHMLFGMPGHAYAVDEPGVNTVKCPIHGHWLYRRKNIDAEPRIRWFCGVEDCHYRYIANSKYEWVRV
Ga0307471_1007889131	3300032180	Hardwood Forest Soil	VRYNSTVGYHMLFGMPGHAYAVDEPGVNTVKCPIHGHWLYRRKNIDAEPRVRWFCGVEDCRYSYIADTKYKWVRA
Ga0307472_1009054252	3300032205	Hardwood Forest Soil	GRSRSNTGNQASYHCGSGGCSVRYNSTDGYYTLLGMPNHTYSVEEPGVNTVKCSGHDHWLYRRENIDAEPGVRWCCGVEGCDYGYDANTKGDWVRT

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F050698

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences