Metagenome / Metatranscriptome Family F050832

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F050832
Family Type	Metagenome / Metatranscriptome
Number of Sequences	144
Average Sequence Length	37 residues
Representative Sequence	MVMDAAAADRTNLMKKKKDGPSRAMLRSILLSVLHV
Number of Associated Samples	42
Number of Associated Scaffolds	144

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	16.08 %
% of genes near scaffold ends (potentially truncated)	27.08 %
% of genes from short scaffolds (< 2000 bps)	97.22 %
Associated GOLD sequencing projects	40
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.30

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (95.139 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (84.722 % of family members)
Environment Ontology (ENVO)	Unclassified (84.028 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (81.250 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 48.44% β-sheet: 0.00% Coil/Unstructured: 51.56%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.30
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.30
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 144 Family Scaffolds
PF03732	Retrotrans_gag	1.39
PF14223	Retrotran_gag_2	0.69
PF07727	RVT_2	0.69
PF14111	DUF4283	0.69

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	95.14 %
All Organisms	root	All Organisms	4.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	95.14 %
cellular organisms	root	All Organisms → cellular organisms	4.17 %
Viruses	superkingdom	All Organisms → Viruses	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	95.14 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	3.47 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.69 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	95.14 %
Viridiplantae	kingdom	All Organisms → cellular organisms → Eukaryota → Viridiplantae	3.47 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.69 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	95.14 %
Streptophyta	phylum	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta	3.47 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.69 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	95.14 %
Streptophytina	subphylum	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina	3.47 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.69 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	95.14 %
Embryophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	3.47 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.69 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	95.14 %
Tracheophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta	2.08 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.69 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	95.14 %
Euphyllophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta	2.08 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.69 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	95.14 %
Spermatophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta	2.08 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.69 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	95.14 %
Acrogymnospermae	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Acrogymnospermae	2.08 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.69 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	95.14 %
Pinopsida	class	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Acrogymnospermae → Pinopsida	2.08 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.69 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	95.14 %
Pinidae	subclass	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Acrogymnospermae → Pinopsida → Pinidae	2.08 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.69 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	95.14 %
Conifers I	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Acrogymnospermae → Pinopsida → Pinidae → Conifers I	2.08 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.69 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	95.14 %
Pinales	order	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Acrogymnospermae → Pinopsida → Pinidae → Conifers I → Pinales	2.08 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.69 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	95.14 %
Pinaceae	family	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Acrogymnospermae → Pinopsida → Pinidae → Conifers I → Pinales → Pinaceae	2.08 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.69 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	95.14 %
Picea	genus	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Acrogymnospermae → Pinopsida → Pinidae → Conifers I → Pinales → Pinaceae → Picea	2.08 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.69 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	95.14 %
Picea sitchensis	species	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Acrogymnospermae → Pinopsida → Pinidae → Conifers I → Pinales → Pinaceae → Picea → Picea sitchensis	1.39 %
Picea glauca	species	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Acrogymnospermae → Pinopsida → Pinidae → Conifers I → Pinales → Pinaceae → Picea → Picea glauca	0.69 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.69 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.69 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300009633\|Ga0116129_1174481	Not Available	611	Open in IMG/M
3300009633\|Ga0116129_1187010	Not Available	588	Open in IMG/M
3300010855\|Ga0126355_1024688	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	505	Open in IMG/M
3300019157\|Ga0184573_101246	Not Available	601	Open in IMG/M
3300019170\|Ga0184570_109080	Not Available	593	Open in IMG/M
3300019185\|Ga0184587_139967	Not Available	825	Open in IMG/M
3300022727\|Ga0224567_100993	Not Available	790	Open in IMG/M
3300023017\|Ga0224574_102722	Not Available	938	Open in IMG/M
3300023017\|Ga0224574_106643	Not Available	641	Open in IMG/M
3300023224\|Ga0224575_106773	Not Available	625	Open in IMG/M
3300023557\|Ga0247521_116178	Not Available	571	Open in IMG/M
3300023557\|Ga0247521_118737	Not Available	510	Open in IMG/M
3300023559\|Ga0247529_111016	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Acrogymnospermae → Pinopsida → Pinidae → Conifers I → Pinales → Pinaceae → Picea → Picea sitchensis	805	Open in IMG/M
3300023559\|Ga0247529_117309	Not Available	577	Open in IMG/M
3300023564\|Ga0247515_118934	Not Available	610	Open in IMG/M
3300023664\|Ga0247527_113951	Not Available	532	Open in IMG/M
3300023666\|Ga0247531_113942	Not Available	603	Open in IMG/M
3300023668\|Ga0247525_115207	Not Available	604	Open in IMG/M
3300023678\|Ga0247538_107528	Not Available	520	Open in IMG/M
3300024123\|Ga0228600_1025378	Not Available	511	Open in IMG/M
3300028019\|Ga0224573_1000917	Not Available	2723	Open in IMG/M
3300030760\|Ga0265762_1127032	Not Available	588	Open in IMG/M
3300030813\|Ga0265750_1077881	Not Available	547	Open in IMG/M
3300030833\|Ga0265736_101222	Not Available	830	Open in IMG/M
3300030872\|Ga0265723_1033037	Not Available	509	Open in IMG/M
3300030873\|Ga0265751_108790	Not Available	624	Open in IMG/M
3300030879\|Ga0265765_1062775	Not Available	527	Open in IMG/M
3300030977\|Ga0265721_1014806	Not Available	540	Open in IMG/M
3300030977\|Ga0265721_1016679	Not Available	526	Open in IMG/M
3300031011\|Ga0265774_104767	Not Available	578	Open in IMG/M
3300031040\|Ga0265754_1028092	Not Available	565	Open in IMG/M
3300031090\|Ga0265760_10162026	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Acrogymnospermae → Pinopsida → Pinidae → Conifers I → Pinales → Pinaceae → Picea → Picea glauca	739	Open in IMG/M
3300031090\|Ga0265760_10174737	Not Available	715	Open in IMG/M
3300031090\|Ga0265760_10364851	Not Available	518	Open in IMG/M
3300031615\|Ga0310107_120560	Not Available	790	Open in IMG/M
3300031615\|Ga0310107_132139	Not Available	578	Open in IMG/M
3300031633\|Ga0310108_125952	Not Available	510	Open in IMG/M
3300031634\|Ga0310106_109405	Not Available	730	Open in IMG/M
3300031686\|Ga0310119_126206	Not Available	613	Open in IMG/M
3300031708\|Ga0310686_100333107	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Acrogymnospermae → Pinopsida → Pinidae → Conifers I → Pinales → Pinaceae → Picea → Picea sitchensis	1038	Open in IMG/M
3300031708\|Ga0310686_100437927	Not Available	793	Open in IMG/M
3300031708\|Ga0310686_100965996	Not Available	611	Open in IMG/M
3300031708\|Ga0310686_101051747	Not Available	892	Open in IMG/M
3300031708\|Ga0310686_101728973	Not Available	658	Open in IMG/M
3300031708\|Ga0310686_101782075	Not Available	625	Open in IMG/M
3300031708\|Ga0310686_102614462	Not Available	806	Open in IMG/M
3300031708\|Ga0310686_102734733	Not Available	573	Open in IMG/M
3300031708\|Ga0310686_102845321	Not Available	554	Open in IMG/M
3300031708\|Ga0310686_102850169	Not Available	885	Open in IMG/M
3300031708\|Ga0310686_102974363	Not Available	779	Open in IMG/M
3300031708\|Ga0310686_103230718	Not Available	578	Open in IMG/M
3300031708\|Ga0310686_103563168	Not Available	601	Open in IMG/M
3300031708\|Ga0310686_104115363	Not Available	502	Open in IMG/M
3300031708\|Ga0310686_104255835	Not Available	588	Open in IMG/M
3300031708\|Ga0310686_104693462	Not Available	721	Open in IMG/M
3300031708\|Ga0310686_105433125	Not Available	503	Open in IMG/M
3300031708\|Ga0310686_105639867	Not Available	651	Open in IMG/M
3300031708\|Ga0310686_105649659	Not Available	2531	Open in IMG/M
3300031708\|Ga0310686_105719302	Not Available	642	Open in IMG/M
3300031708\|Ga0310686_105847935	Not Available	694	Open in IMG/M
3300031708\|Ga0310686_106534040	Not Available	551	Open in IMG/M
3300031708\|Ga0310686_106958495	Not Available	674	Open in IMG/M
3300031708\|Ga0310686_107313183	Not Available	519	Open in IMG/M
3300031708\|Ga0310686_107378881	Not Available	673	Open in IMG/M
3300031708\|Ga0310686_107464454	Not Available	761	Open in IMG/M
3300031708\|Ga0310686_107639505	Not Available	692	Open in IMG/M
3300031708\|Ga0310686_107692998	Not Available	569	Open in IMG/M
3300031708\|Ga0310686_108274428	Not Available	1003	Open in IMG/M
3300031708\|Ga0310686_108341679	Not Available	664	Open in IMG/M
3300031708\|Ga0310686_108377425	Not Available	2120	Open in IMG/M
3300031708\|Ga0310686_108464409	Not Available	723	Open in IMG/M
3300031708\|Ga0310686_108512715	Not Available	662	Open in IMG/M
3300031708\|Ga0310686_108578805	Not Available	880	Open in IMG/M
3300031708\|Ga0310686_108785371	Not Available	697	Open in IMG/M
3300031708\|Ga0310686_109025667	Not Available	916	Open in IMG/M
3300031708\|Ga0310686_109034305	Not Available	832	Open in IMG/M
3300031708\|Ga0310686_109716323	Not Available	683	Open in IMG/M
3300031708\|Ga0310686_109760915	Not Available	1251	Open in IMG/M
3300031708\|Ga0310686_109807088	Not Available	927	Open in IMG/M
3300031708\|Ga0310686_109990643	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	1222	Open in IMG/M
3300031708\|Ga0310686_109993140	Not Available	628	Open in IMG/M
3300031708\|Ga0310686_110180837	Not Available	708	Open in IMG/M
3300031708\|Ga0310686_110210369	Not Available	590	Open in IMG/M
3300031708\|Ga0310686_110308190	Not Available	616	Open in IMG/M
3300031708\|Ga0310686_110571584	Not Available	806	Open in IMG/M
3300031708\|Ga0310686_110676382	Not Available	576	Open in IMG/M
3300031708\|Ga0310686_110820271	Not Available	675	Open in IMG/M
3300031708\|Ga0310686_110875291	Not Available	664	Open in IMG/M
3300031708\|Ga0310686_110919199	Not Available	522	Open in IMG/M
3300031708\|Ga0310686_110961538	Not Available	809	Open in IMG/M
3300031708\|Ga0310686_111198722	Not Available	583	Open in IMG/M
3300031708\|Ga0310686_111213946	Not Available	656	Open in IMG/M
3300031708\|Ga0310686_111214753	Not Available	715	Open in IMG/M
3300031708\|Ga0310686_111437689	Not Available	689	Open in IMG/M
3300031708\|Ga0310686_111457956	Not Available	538	Open in IMG/M
3300031708\|Ga0310686_111689869	Not Available	545	Open in IMG/M
3300031708\|Ga0310686_111961940	Not Available	790	Open in IMG/M
3300031708\|Ga0310686_112106554	Not Available	643	Open in IMG/M
3300031708\|Ga0310686_112483506	Not Available	584	Open in IMG/M
3300031708\|Ga0310686_112559880	Not Available	617	Open in IMG/M
3300031708\|Ga0310686_112646640	Not Available	1069	Open in IMG/M
3300031708\|Ga0310686_113481864	Not Available	852	Open in IMG/M
3300031708\|Ga0310686_113826684	Not Available	989	Open in IMG/M
3300031708\|Ga0310686_113828212	Not Available	1023	Open in IMG/M
3300031708\|Ga0310686_114444679	Not Available	528	Open in IMG/M
3300031708\|Ga0310686_114817734	Not Available	502	Open in IMG/M
3300031708\|Ga0310686_114888225	Not Available	528	Open in IMG/M
3300031708\|Ga0310686_114942578	Not Available	631	Open in IMG/M
3300031708\|Ga0310686_115416852	Not Available	671	Open in IMG/M
3300031708\|Ga0310686_115506281	Not Available	770	Open in IMG/M
3300031708\|Ga0310686_115687407	Not Available	731	Open in IMG/M
3300031708\|Ga0310686_116017484	Not Available	851	Open in IMG/M
3300031708\|Ga0310686_116215455	Not Available	765	Open in IMG/M
3300031708\|Ga0310686_116325580	Not Available	696	Open in IMG/M
3300031708\|Ga0310686_116454086	Not Available	696	Open in IMG/M
3300031708\|Ga0310686_116707117	All Organisms → Viruses → Predicted Viral	1560	Open in IMG/M
3300031708\|Ga0310686_116921431	Not Available	719	Open in IMG/M
3300031708\|Ga0310686_117636099	Not Available	741	Open in IMG/M
3300031708\|Ga0310686_117836117	Not Available	901	Open in IMG/M
3300031708\|Ga0310686_119001934	Not Available	922	Open in IMG/M
3300031708\|Ga0310686_119396255	Not Available	1336	Open in IMG/M
3300031708\|Ga0310686_119658415	Not Available	560	Open in IMG/M
3300031708\|Ga0310686_119936838	All Organisms → cellular organisms → Bacteria → Proteobacteria	689	Open in IMG/M
3300031708\|Ga0310686_119938182	Not Available	555	Open in IMG/M
3300031808\|Ga0316037_107029	Not Available	738	Open in IMG/M
3300031810\|Ga0316044_129645	Not Available	527	Open in IMG/M
3300031815\|Ga0316045_119998	Not Available	645	Open in IMG/M
3300031815\|Ga0316045_124867	Not Available	546	Open in IMG/M
3300031828\|Ga0316043_122850	Not Available	677	Open in IMG/M
3300031891\|Ga0316039_110245	Not Available	631	Open in IMG/M
3300032515\|Ga0348332_10030349	Not Available	525	Open in IMG/M
3300032515\|Ga0348332_10222327	Not Available	507	Open in IMG/M
3300032515\|Ga0348332_10772556	Not Available	895	Open in IMG/M
3300032515\|Ga0348332_11434270	Not Available	584	Open in IMG/M
3300032515\|Ga0348332_12655605	Not Available	678	Open in IMG/M
3300032515\|Ga0348332_12663667	Not Available	778	Open in IMG/M
3300033544\|Ga0316215_1013693	Not Available	810	Open in IMG/M
3300033544\|Ga0316215_1025966	Not Available	603	Open in IMG/M
3300033545\|Ga0316214_1051207	Not Available	599	Open in IMG/M
3300033547\|Ga0316212_1013997	Not Available	1139	Open in IMG/M
3300033547\|Ga0316212_1062156	Not Available	539	Open in IMG/M
3300033548\|Ga0316216_1008866	Not Available	767	Open in IMG/M
3300033548\|Ga0316216_1016102	Not Available	604	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	91.67%
Host-Associated	Host-Associated	8.33%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	90.28%
Plants	Host-Associated → Plants	8.33%
Aquatic	Environmental → Aquatic	1.39%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	85.42%
Roots	Host-Associated → Plants → Roots	8.33%
Plant Litter	Environmental → Terrestrial → Plant Litter	4.86%
Freshwater	Environmental → Aquatic → Freshwater	1.39%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	85.42%
Unclassified	Host-Associated → Plants → Roots → Unclassified	8.33%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	4.86%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	1.39%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	85.42%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	8.33%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	4.86%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	1.39%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	84.72%
Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Roots	8.33%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	4.17%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	1.39%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.69%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	0.69%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300009633	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_10	Environmental	Open in IMG/M
3300010855	Boreal forest soil eukaryotic communities from Alaska, USA - W1-5 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300019157	Spruce litter microbial communities from Bohemian Forest, Czech Republic ? CLU3 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019170	Spruce litter microbial communities from Bohemian Forest, Czech Republic ? CLI3 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019185	Soil microbial communities from Bohemian Forest, Czech Republic ? CSE2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022727	Spruce litter microbial communities from Bohemian Forest, Czech Republic ? CLU3	Environmental	Open in IMG/M
3300023017	Spruce roots microbial communities from Bohemian Forest, Czech Republic ? CRU3	Host-Associated	Open in IMG/M
3300023224	Spruce roots microbial communities from Bohemian Forest, Czech Republic ? CRU4	Host-Associated	Open in IMG/M
3300023557	Metatranscriptome of spruce roots microbial communities from Bohemian Forest, Czech Republic - CRU5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300023559	Metatranscriptome of spruce roots microbial communities from Bohemian Forest, Czech Republic - CRA3 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300023564	Metatranscriptome of spruce roots microbial communities from Bohemian Forest, Czech Republic - CRI4 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300023664	Metatranscriptome of spruce roots microbial communities from Bohemian Forest, Czech Republic - CRA1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300023666	Metatranscriptome of spruce roots microbial communities from Bohemian Forest, Czech Republic - CRA5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300023668	Metatranscriptome of spruce roots microbial communities from Bohemian Forest, Czech Republic - CRE4 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300023678	Metatranscriptome of spruce litter microbial communities from Bohemian Forest, Czech Republic - CLA4 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300024123	Spruce roots microbial communities from Bohemian Forest, Czech Republic - CRU5	Host-Associated	Open in IMG/M
3300028019	Spruce roots microbial communities from Bohemian Forest, Czech Republic ? CRU1	Host-Associated	Open in IMG/M
3300030760	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI4 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030813	Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSE1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030833	Metatranscriptome of plant litter microbial communities from Maridalen valley, Oslo, Norway - NLA2 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030872	Metatranscriptome of plant litter microbial communities from Maridalen valley, Oslo, Norway - NLI5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030873	Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSE2 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030879	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZU1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030977	Metatranscriptome of plant litter microbial communities from Maridalen valley, Oslo, Norway - NLI2 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031011	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE6 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031040	Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSE6 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031090	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031615	Metatranscriptome of spruce roots microbial communities from Maridalen valley, Oslo, Norway - NRU2 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031633	Metatranscriptome of spruce roots microbial communities from Maridalen valley, Oslo, Norway - NRU4 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031634	Metatranscriptome of spruce roots microbial communities from Maridalen valley, Oslo, Norway - NRU1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031686	Metatranscriptome of spruce roots microbial communities from Maridalen valley, Oslo, Norway - NRA6 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031808	Spruce litter microbial communities from Bohemian Forest, Czech Republic ? CLE3 metaT (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300031810	Metatranscriptome of spruce roots microbial communities from Bohemian Forest, Czech Republic - CRA1 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300031815	Metatranscriptome of spruce roots microbial communities from Bohemian Forest, Czech Republic - CRA2 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300031828	Metatranscriptome of spruce roots microbial communities from Bohemian Forest, Czech Republic - CRU3 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300031891	Spruce litter microbial communities from Bohemian Forest, Czech Republic ? CLA3 metaT (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300032515	FICUS49499 Metatranscriptome Czech Republic combined assembly (additional data)	Environmental	Open in IMG/M
3300033544	Spruce roots microbial communities from Maridalen valley, Oslo, Norway - NRE5	Host-Associated	Open in IMG/M
3300033545	Spruce roots microbial communities from Maridalen valley, Oslo, Norway - NRE4	Host-Associated	Open in IMG/M
3300033547	Spruce roots microbial communities from Maridalen valley, Oslo, Norway - NRE1	Host-Associated	Open in IMG/M
3300033548	Spruce roots microbial communities from Maridalen valley, Oslo, Norway - NRE6	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0116129_11744811	3300009633	Peatland	MVMDAAAADRIGLMKKKKDGPSRAMLRSILLSALH
Ga0116129_11870101	3300009633	Peatland	MVMDVAAADKIKLMEEEKDGPSRAMLRSILLSVLHV*
Ga0126355_10246882	3300010855	Boreal Forest Soil	MEAGTADKTKLAEKKKDGPSRAMLKSLLLSVLHV*
Ga0184573_1012461	3300019157	Soil	MVMDVVAADKTNLVKKKKDGPSRAMLRSILLSVLHV
Ga0184570_1090802	3300019170	Soil	MVMDVAAVDRTNLAKKKKDGPSRAMLRSILLSVLHV
Ga0184587_1399672	3300019185	Soil	MVMEAAAADRTNLAEKKKDGPSRAMLRSILLLVLHV
Ga0224567_1009932	3300022727	Plant Litter	MVMDALAADRTGLMKKKKDGPSRAMLRSILLSVLHV
Ga0224574_1027222	3300023017	Roots	MVMEAVAADRTSLAKKKKDGPSRAMLRSILLSALHV
Ga0224574_1066431	3300023017	Roots	MVMDAVAADKIKLMEEEKDGPSRAMLRSILLSILHV
Ga0224575_1067731	3300023224	Roots	MVMDVVVVDKTKLMKEGNDGPFRAMLRSILLSVLHV
Ga0247521_1161781	3300023557	Soil	MVMDAAAADKTKMMEEEKDGPSRAMLRSILLSVLHV
Ga0247521_1187371	3300023557	Soil	MVMDVAAADKTNLMKEEKDEPSRAMLRSILLSILHV
Ga0247529_1110161	3300023559	Soil	KSPLRCKPRPVVMEVATADRTSLAEKKKDGPSRAMLKAIPLSVLHV
Ga0247529_1173091	3300023559	Soil	CKAKPVVMEAGTADRTKLAEKKKDGPSRAMLKSLLLSLLHV
Ga0247515_1189341	3300023564	Soil	MVMDVAAADRTSLVKKKKDGPSRAMLRSMLLSVLHV
Ga0247527_1139511	3300023664	Soil	MVMEAAAADRTSLAKKKKDGPSRAMLRSILLSILHV
Ga0247531_1139421	3300023666	Soil	MVMDAAAADRTILAKKKKDGPSRAMFRSILLSVLHV
Ga0247525_1152072	3300023668	Soil	RYRPRPKVMDVVAVDRTSLMKKKKDGPSRAMLRSILLSVLHV
Ga0247538_1075281	3300023678	Soil	MVMDAVAADKIKLMEEEKDGPSRAMLRSILLSVLHV
Ga0228600_10253781	3300024123	Roots	LQCKPRPVVMEAVTADRTSLAEKKKDGPSRAMLKSLLLSVLHV
Ga0224573_10009171	3300028019	Roots	MVMEAVAADRTSLAKKKKKDGPSRAMLRSILLSALHV
Ga0265762_11270322	3300030760	Soil	MVMEAAAADRTSLAKKKKDGPSRAMLRSILLSVLHV
Ga0265750_10778811	3300030813	Soil	MVMDVAAAAKIKLMEEETDGLSSAMVRSILLLILHV
Ga0265736_1012221	3300030833	Soil	MEAGTADRTKLAEKKKDGPSRAMFKLLLLSVLHVQDHVGLET
Ga0265723_10330371	3300030872	Soil	MVMDVVVADKTKLMKEENDGPSRAMLRSILLSVLHV
Ga0265751_1087902	3300030873	Soil	MVMDAAAADRTNLMKKKKDGPSRAMLRSILLSVLHV
Ga0265765_10627751	3300030879	Soil	MVMDAAAAKKIKLMEEEKDGPSRAMLKSILLSVLHV
Ga0265721_10148061	3300030977	Soil	MVMEVAAADRTNLAKKKKDGPSRAMLRSILLSVLHV
Ga0265721_10166791	3300030977	Soil	MVMDVAVADKTKMMEEEKDGPSRAMLRSILLSILHV
Ga0265774_1047671	3300031011	Soil	SKSLLRCKPRPVVMETATADRTSLAEKKKDGPSRAMLKSLLLSVLHV
Ga0265754_10280921	3300031040	Soil	MVMDVVAADKTSLMKEKKYGPSRAMLRSILLSVLHV
Ga0265760_101620262	3300031090	Soil	MVMDATAADKKRMMEEEKGGPSRAMLRSILLSVLHV
Ga0265760_101747371	3300031090	Soil	MVMDAAAADRTNLVKKKKDGPARAMLRSILLSILHV
Ga0265760_103648511	3300031090	Soil	KPRPVVMEAATADRTSLAEKKKDGPSRAMLKSLLLSVLHV
Ga0310107_1205601	3300031615	Soil	MVMDVAATDRTNLAKKKKDGPSRAMLRSILLLVLHV
Ga0310107_1321391	3300031615	Soil	MVMDVVAADRTSLMKKKKDGPSKAMLRSILLSILHV
Ga0310108_1259521	3300031633	Soil	MVMEAAAANRTSLAKKKKDGPSKAKLRSILLSVLHV
Ga0310106_1094051	3300031634	Soil	MVMEAVAADRTNLAEKKKDGPSRAMLRSILLSVLHV
Ga0310119_1262061	3300031686	Soil	VMDAAAADKTNLTKEEKDGPSRAMLESILLSILHV
Ga0310686_1003331072	3300031708	Soil	MVMDVDAADRTNLVNNKKDGPSRAMLRSILLSVLHV
Ga0310686_1004379272	3300031708	Soil	MVMDAAALDKTKLMEEEKDGSSRAMLRSILLSALHV
Ga0310686_1009659961	3300031708	Soil	MVMDVAATDRINLVKKKKDGPSRAMLKSIPLSVLHVWDHVGLET
Ga0310686_1010517472	3300031708	Soil	MVMDAAAADRTNLAKKKKDGPSRAMLRSILLSILHV
Ga0310686_1017289732	3300031708	Soil	KSMVMEAAAVDRTSLAKKKKDGPSRAMLKSILLSVLHV
Ga0310686_1017820751	3300031708	Soil	YRTKPMVMDVTIADKTRMMKEEKGGPSRAMLRSILLSVLHV
Ga0310686_1026144622	3300031708	Soil	WSKSPLRYKPRPVVMETATADRTNLTKKKKDGPSRAMLKSILLSVVHV
Ga0310686_1027347332	3300031708	Soil	MVMEVVAADRTSLAKKKKDGPSRAMLRSILLSVLHV
Ga0310686_1028453211	3300031708	Soil	MLMDGVVADRTNMAKKKKDGPSRAMLRSILVLVLHV
Ga0310686_1028501693	3300031708	Soil	MVMDVVVVDKTKLMEEEKDGPYRSMVRSILLSVLHV
Ga0310686_1029743631	3300031708	Soil	MVMDVVTADKTKTMSEEKVGPSRAMLRSILFSVLHV
Ga0310686_1032307181	3300031708	Soil	MVMDVVVADRTSLVEKTKDGPSRAMLRSILLSVLHV
Ga0310686_1035631682	3300031708	Soil	MVMDVFVADKTNLMEEEEDGPSKAMLRSILLSVLHV
Ga0310686_1041153631	3300031708	Soil	MVIDVVAANKTSLMKEEKDGPSRAMLRSILLSVLHV
Ga0310686_1042558351	3300031708	Soil	MVMDVVAADKTNLMKEEKDGPSKAMLRSILLFVLHV
Ga0310686_1046934621	3300031708	Soil	KVMDIATANRTSLMKEKKGGPSKAMLKSILLSVLHV
Ga0310686_1054331251	3300031708	Soil	MVMNNVAADKTKLMEEENDGPSGAMLRSILLSLLHV
Ga0310686_1056398671	3300031708	Soil	MVIEVVAADRTNPAKKKKDGPPRAMLRSILLSVLHV
Ga0310686_1056496591	3300031708	Soil	MVVMEVATDDRTSMAEKKNDGPSRAMLKSFLLSVLHV
Ga0310686_1057193021	3300031708	Soil	PMVMEAVAANRTSLEKKKKDGPSRAMLRSILLSVLHV
Ga0310686_1058479352	3300031708	Soil	MVMDAAAVDRTSLMKKKKDGPSRAMLRSILLSVLHV
Ga0310686_1065340402	3300031708	Soil	LRNKSKPVVMEAAVADRTSLAEKKKDGPSRAMLRSILLSILHV
Ga0310686_1069584951	3300031708	Soil	MVMDVVVVDKSNMMEEERDGPSRAILRSILISVLHV
Ga0310686_1073131831	3300031708	Soil	WSKSPLRYKPRPVVVETATADRTNFTKKKKDGPSRAMLKSTLLSVLHV
Ga0310686_1073788812	3300031708	Soil	MVTDVVAADKMKLMEEEKDGPSRAMLKSILLSLLHV
Ga0310686_1074644541	3300031708	Soil	RPVVMEAATADRTNLAEKKKDGPSRAMLKSILLSVLHV
Ga0310686_1076395051	3300031708	Soil	MVMDAAAADKTKLMEEEKDGPSRAMLRSILLSVLHV
Ga0310686_1076929981	3300031708	Soil	MVMDVDVVAAEKIKLMEEEKDGPFKAILRSILLLVLHV
Ga0310686_1082744282	3300031708	Soil	MVMEAAAADRTNLAKKKKDGPSRAMLRSILLSSLHF
Ga0310686_1083416791	3300031708	Soil	PMVMDATAADKMNLMKEEKDGPSRAMLRSILLSVLRV
Ga0310686_1083774251	3300031708	Soil	KTKSMVMDPAAADKTKLMEEEKDGPSRAMLRSILLSVLHV
Ga0310686_1084644093	3300031708	Soil	MEVVAADRKNLAKKKDGPSRAMLRSILLSVLHVLDHVGLET
Ga0310686_1085127151	3300031708	Soil	NPMVMDATVADKTNLMKEEKDGPSRTMLKPILLSVLHV
Ga0310686_1085788051	3300031708	Soil	KPMVMEATAADRTSLVKKRKDGPPRAMLTSILLSALHV
Ga0310686_1087853711	3300031708	Soil	KSKPMVMEVVAADRTSLAKKKKDGPSRAMLRSILLSVLHV
Ga0310686_1090256671	3300031708	Soil	VVMETATADRTNLTKKKRDGPFRAMLKSIPLSVLHV
Ga0310686_1090343051	3300031708	Soil	MVMDVVAADRITLMKKKKDGPSRAMLRSILLSVLHV
Ga0310686_1097163231	3300031708	Soil	MTKPMVMDATAADKIKLMEEEKDGPSRAMLKSILLSVLHV
Ga0310686_1097609153	3300031708	Soil	MVMDATAADKTNLTKEEKDGPSRAVLKSILLSILHF
Ga0310686_1098070881	3300031708	Soil	MVMEVVAANRTSLAKKKKDGPSMAMLRSILLLVLHI
Ga0310686_1099906433	3300031708	Soil	RCKSKPVVMEVVAADKTNLAKKKKDGPSKAMLRSIVLSVLHV
Ga0310686_1099931401	3300031708	Soil	KTKSMVMDAVVANKTNLMKEEKDGPSRAIIRSILLSVLHV
Ga0310686_1101808371	3300031708	Soil	KSKPKVMDVAAVDRTSLMKKKKDGPSRAMLRSVLLSVLHV
Ga0310686_1102103691	3300031708	Soil	MVMEAIVADRTNMMKNKKDGPSRAMLRSILLSVLHV
Ga0310686_1103081902	3300031708	Soil	MVMDVVAADKIKLMEEEKDGPSRGMLRSILFSVLHV
Ga0310686_1105715841	3300031708	Soil	MVMDAAATDRTSLAKKKKEGPSRAMLRSILLSVLHV
Ga0310686_1106763821	3300031708	Soil	MVMEAAAADRTSLAKKKKNGPCRAMLRSILLPILHV
Ga0310686_1108202711	3300031708	Soil	MVMEAVAADRTNLAKKKRNGPSRAMLRSILLSVLHV
Ga0310686_1108752911	3300031708	Soil	LLRHKIKSMVTDDVATDKTNLMKEEKDGPSRAMLRSILLSVLHV
Ga0310686_1109191991	3300031708	Soil	MVMDVVAVDKTNLTKEEKDGPSRAMLRSILLSILHV
Ga0310686_1109615381	3300031708	Soil	MVMDAAAANKTNLMKEKKDGPSRAMLRSILLSVLHV
Ga0310686_1111987221	3300031708	Soil	SPLRCKPKPVVTEAAATDRTNLAKKKKDGPSRAMLKSILLLVLHV
Ga0310686_1112139461	3300031708	Soil	CKSKPMVMDDVAVDRTRLAKKEKDGPSRAMIRSILLSVLHV
Ga0310686_1112147531	3300031708	Soil	MVMEVGAADRTSQEKKKNGPSRAMLRSILLSVLHV
Ga0310686_1114376891	3300031708	Soil	MVMDVAAADRTNLMKKKKDGPSRTMLRSILLSVLHV
Ga0310686_1114579561	3300031708	Soil	KTKPMVMIVVVVDKMNLTKEEKDGPSRAMLRSIFLSVLHV
Ga0310686_1116898691	3300031708	Soil	MAMDVVVADEINLMEEENDGPSRAILRSILLSVLHV
Ga0310686_1119619401	3300031708	Soil	MVMDAAAADKTKMMEEEKDGPSRAVLRSILLSVLHV
Ga0310686_1121065541	3300031708	Soil	MVMDAVATDKTKLMEEEKDGPSRAMLRSFLLSVLHV
Ga0310686_1124835062	3300031708	Soil	MVMNAAAADKKNLMKKKKDGPSRAMLRSILLSVLHV
Ga0310686_1125598801	3300031708	Soil	RYKTRPMVMDVVATDKTILMKEKKDGPSRAILKSILLSVLHV
Ga0310686_1126466401	3300031708	Soil	MVMDVVTVDKIKMMEEEKDGPFRAMLRSILLSVLHV
Ga0310686_1134818642	3300031708	Soil	MVMDAAAANKTEVMEEEKDGPSRAMLRSILLSVLHV
Ga0310686_1138266842	3300031708	Soil	AMEAATADRTSLTEKKKAGPSRAMLKSTSLSVLHV
Ga0310686_1138282122	3300031708	Soil	MVMDVVATDKKKLMEEEKDGPSRSMLRSILPLVLHV
Ga0310686_1144446791	3300031708	Soil	MVMDFVAADKTTLMEEEKDGPSKAMLRSILLSVLHV
Ga0310686_1148177342	3300031708	Soil	MVMNAAATDRTNLVKKKKDGPSRAMLRSILLSVLHV
Ga0310686_1148882252	3300031708	Soil	PLRCRTRVVVKETATADRTNMTKKKDGPSRAMLKSIPLSVLHV
Ga0310686_1149425782	3300031708	Soil	MVMEVAAADRTSLAKKKKDGPSRAMLRSILLSVLHV
Ga0310686_1154168521	3300031708	Soil	MVMEVAAADRTSLAKKKKNGPSRAMLRSILLSVLHV
Ga0310686_1155062812	3300031708	Soil	MVMDVAVADKMNLTKEEKDGPSRAMLRSILLSVLHV
Ga0310686_1156874071	3300031708	Soil	MVMDVATAGKTSLMKEKKDGPSRAMLRAILLSVLHV
Ga0310686_1160174843	3300031708	Soil	MVMDAAVANRTNLAKKKKDGPSRAMLRSILLSVLHV
Ga0310686_1162154551	3300031708	Soil	MVMEAVAADRTNLAKKKKDGPCRAMLKSLMLSVLHV
Ga0310686_1163255802	3300031708	Soil	MVMDVVAANRTNLMKKKKDGPSRAMLRSILLSVLHV
Ga0310686_1164540861	3300031708	Soil	YKTKPMVMDVVAAEKIKLMEEEKDGPSRAMIRSISLSLLHV
Ga0310686_1167071175	3300031708	Soil	MVMDAAAVDKKNLMEEEKDSPSRVMLRSILLSVLHV
Ga0310686_1169214311	3300031708	Soil	MVMDIVAADKTNLMEEEKDRLSRVMLRSILFSVLHVQD
Ga0310686_1176360991	3300031708	Soil	MVMDAAAADRTSLAKKKKDGPSRAMLRSILLSALHV
Ga0310686_1178361171	3300031708	Soil	RPVVMEAATADRTSLAKKKKDGPSKAMLKSIPLSVLHV
Ga0310686_1190019341	3300031708	Soil	MVMDVAAADRKNLAKKKKDGPSRAMLRSILLSVLHV
Ga0310686_1193962552	3300031708	Soil	MVMDAVAAEKTSLTKEEKDGPSRAMLRLILLLVLHV
Ga0310686_1196584152	3300031708	Soil	MVMDAATADRTSLMKKKKDGPSRAMLRSILLSVFHV
Ga0310686_1199368381	3300031708	Soil	MVMEAVATDRTSMAKKKKDGPSRAMLRPILLSVLHV
Ga0310686_1199381822	3300031708	Soil	VMDAATADKIKLMEEEKDGPSRAMLRSILLSVLHV
Ga0316037_1070291	3300031808	Soil	MVMEAAAANRTSLAKKKKGGPSRAMLRSILLSVLHV
Ga0316044_1296451	3300031810	Soil	MVMDVAAADKTSLMKEKKDGPSRAMLRSILLSVLHI
Ga0316045_1155881	3300031815	Soil	MDVDVVAADKTSLMKEKKDGPSKAILKSIWLLVLHV
Ga0316045_1199981	3300031815	Soil	MVMDVATADRTILAKKKKDGPSKAMLRSILLSILHV
Ga0316045_1248671	3300031815	Soil	MVMDVAATDKTKLMEEEKDGPSRAMLKSILLSVLHV
Ga0316043_1228501	3300031828	Soil	MVMDAAAANKTNLMKEEKDGPSRAMLRSILLSVLHV
Ga0316039_1102451	3300031891	Soil	MVMDAAAADRTGLMKKKKDGPSRAMLKSILLSVLHV
Ga0348332_100303491	3300032515	Plant Litter	MVMDAIVVDKTKLMEDEKDGTSRAMLRSILLSILHV
Ga0348332_102223271	3300032515	Plant Litter	MMEAGIDDKTKLAEKKKDGPSRAMPRSLLLSVLHV
Ga0348332_107725561	3300032515	Plant Litter	MVMEAAAANRTSLAKKKKDGPSRAMLRSILLSVLHV
Ga0348332_114342701	3300032515	Plant Litter	QESSPSKARPIVMEAATADRTNLAEKKKDGPSRAMLRSILLLVLHV
Ga0348332_126556051	3300032515	Plant Litter	MVMDAAAADRTSLMKKKKDGPSRAMLRSILLLVLHV
Ga0348332_126636672	3300032515	Plant Litter	MVMEVGAADRTSLAKKKNGPSRAMLRLILLSVLHV
Ga0316215_10136931	3300033544	Roots	MVMDVVAADKTNLMEEEKDGPSRAMLRSILLSVLHV
Ga0316215_10259662	3300033544	Roots	MVMDAAAADKIKLMEEEKDGPSRAMLRSILLSILHV
Ga0316214_10512072	3300033545	Roots	MVMDAAAADRTNLTKKKKDGPSRAMLKSILLSVLHV
Ga0316212_10139971	3300033547	Roots	VMEAAAVDRTNLAKKKKDGPSRAMLRSILLSVLHV
Ga0316212_10621561	3300033547	Roots	MVMEAVAVDKTSLAKKKKDGPSRAMLRSILLSALHV
Ga0316216_10088661	3300033548	Roots	MVMDAAAADRTSLAKKKKDGLSGAMLRSILFSILHV
Ga0316216_10161021	3300033548	Roots	MVMDAAATDKIKLMEEEKDGPSTAMLRSILLLVLHV

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F050832

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences