Metagenome / Metatranscriptome Family F051062

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F051062
Family Type	Metagenome / Metatranscriptome
Number of Sequences	144
Average Sequence Length	111 residues
Representative Sequence	MAILSGSIEADVPIAFADREWTEFVFRNLYGNYAKGFEDVAASINETDADSGTVQFETEGERLVKVSVELEYTPHGGDAKAEVARAQARLNADLEKYRTFLLKRCEQESCRPS
Number of Associated Samples	93
Number of Associated Scaffolds	144

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	71.43 %
% of genes near scaffold ends (potentially truncated)	35.42 %
% of genes from short scaffolds (< 2000 bps)	78.47 %
Associated GOLD sequencing projects	86
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.73

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Unclassified (55.556 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen (22.222 % of family members)
Environment Ontology (ENVO)	Unclassified (55.556 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (48.611 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 35.46% β-sheet: 21.28% Coil/Unstructured: 43.26%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.73
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.73
Powered by PDBe Molstar

SCOP family	SCOP domain	Representative PDB	TM-score
d.129.3.6: oligoketide cyclase/dehydrase-like	d3tvqa_	3tvq	0.80498
d.129.3.6: oligoketide cyclase/dehydrase-like	d2d4ra1	2d4r	0.80036
d.129.3.2: STAR domain	d5i9ja_	5i9j	0.77304
d.129.3.4: Phoshatidylinositol transfer protein, PITP	d1kcma_	1kcm	0.74687
d.129.3.1: Pathogenesis-related protein 10 (PR10)-like	d4a8ua_	4a8u	0.74426

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 144 Family Scaffolds
PF00753	Lactamase_B	3.47
PF13396	PLDc_N	2.78
PF12680	SnoaL_2	2.08
PF13581	HATPase_c_2	2.08
PF05368	NmrA	1.39
PF01904	DUF72	1.39
PF03699	UPF0182	1.39
PF04545	Sigma70_r4	1.39
PF12769	PNTB_4TM	0.69
PF04248	NTP_transf_9	0.69
PF13376	OmdA	0.69
PF13474	SnoaL_3	0.69
PF13412	HTH_24	0.69
PF08220	HTH_DeoR	0.69
PF13439	Glyco_transf_4	0.69
PF00903	Glyoxalase	0.69
PF13239	2TM	0.69
PF04060	FeS	0.69
PF00892	EamA	0.69
PF07681	DoxX	0.69
PF01243	Putative_PNPOx	0.69
PF07992	Pyr_redox_2	0.69
PF01040	UbiA	0.69
PF02698	DUF218	0.69
PF01609	DDE_Tnp_1	0.69
PF02233	PNTB	0.69
PF09335	SNARE_assoc	0.69
PF01740	STAS	0.69
PF03992	ABM	0.69
PF01061	ABC2_membrane	0.69
PF00313	CSD	0.69
PF13692	Glyco_trans_1_4	0.69
PF03358	FMN_red	0.69
PF00990	GGDEF	0.69
PF12681	Glyoxalase_2	0.69
PF09594	GT87	0.69
PF02325	YGGT	0.69
PF00857	Isochorismatase	0.69
PF13353	Fer4_12	0.69
PF13365	Trypsin_2	0.69
PF13185	GAF_2	0.69

COG ID	Name	Functional Category	% Frequency in 144 Family Scaffolds
COG1615	Uncharacterized membrane protein, UPF0182 family	Function unknown [S]	1.39
COG1801	Sugar isomerase-related protein YecE, UPF0759/DUF72 family	General function prediction only [R]	1.39
COG0398	Uncharacterized membrane protein YdjX, related to fungal oxalate transporter, TVP38/TMEM64 family	Function unknown [S]	0.69
COG0586	Membrane integrity protein DedA, putative transporter, DedA/Tvp38 family	Cell wall/membrane/envelope biogenesis [M]	0.69
COG0762	Cytochrome b6 maturation protein CCB3/Ycf19 and related maturases, YggT family	Posttranslational modification, protein turnover, chaperones [O]	0.69
COG1238	Uncharacterized membrane protein YqaA, VTT domain	Function unknown [S]	0.69
COG1282	NAD/NADP transhydrogenase beta subunit	Energy production and conversion [C]	0.69
COG1335	Nicotinamidase-related amidase	Coenzyme transport and metabolism [H]	0.69
COG1434	Lipid carrier protein ElyC involved in cell wall biogenesis, DUF218 family	Cell wall/membrane/envelope biogenesis [M]	0.69
COG1535	Isochorismate hydrolase	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.69
COG2259	Uncharacterized membrane protein YphA, DoxX/SURF4 family	Function unknown [S]	0.69
COG2343	Uncharacterized conserved protein, DUF427 family	Function unknown [S]	0.69
COG2949	Uncharacterized periplasmic protein SanA, affects membrane permeability for vancomycin	Cell wall/membrane/envelope biogenesis [M]	0.69
COG3039	Transposase and inactivated derivatives, IS5 family	Mobilome: prophages, transposons [X]	0.69
COG3293	Transposase	Mobilome: prophages, transposons [X]	0.69
COG3385	IS4 transposase InsG	Mobilome: prophages, transposons [X]	0.69
COG4270	Uncharacterized membrane protein	Function unknown [S]	0.69
COG5421	Transposase	Mobilome: prophages, transposons [X]	0.69
COG5433	Predicted transposase YbfD/YdcC associated with H repeats	Mobilome: prophages, transposons [X]	0.69
COG5659	SRSO17 transposase	Mobilome: prophages, transposons [X]	0.69

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.56 %
All Organisms	root	All Organisms	44.44 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.56 %
cellular organisms	root	All Organisms → cellular organisms	44.44 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.56 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	42.36 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	2.08 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.56 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	24.31 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	2.08 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	1.39 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.56 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	20.14 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	2.08 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	1.39 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.56 %
unclassified Actinobacteria	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria	11.11 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4.86 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	2.08 %
unclassified Planctomycetota	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota	1.39 %
Candidatus Dadabacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Dadabacteria	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.56 %
Actinobacteria bacterium ADurb.BinA094	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium ADurb.BinA094	11.11 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	3.47 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	2.08 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	1.39 %
Frankiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales	0.69 %
Candidatus Dadabacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Dadabacteria → Candidatus Dadabacteria bacterium	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.56 %
Actinobacteria bacterium ADurb.BinA094	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium ADurb.BinA094	11.11 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3.47 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	2.08 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	1.39 %
Frankiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae	0.69 %
Candidatus Dadabacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Dadabacteria → Candidatus Dadabacteria bacterium	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.56 %
Actinobacteria bacterium ADurb.BinA094	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium ADurb.BinA094	11.11 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3.47 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	2.08 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	1.39 %
Frankia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia	0.69 %
Candidatus Dadabacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Dadabacteria → Candidatus Dadabacteria bacterium	0.69 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2088090004\|P1_DRAFT_NODE_31605_len_1910_cov_9_160210	Not Available	1960	Open in IMG/M
2124908028\|beta3_all_NODE_161909_len_738_cov_10_761518	All Organisms → cellular organisms → Bacteria → Terrabacteria group	788	Open in IMG/M
2124908035\|B3_GZOS_CLC_ConsensusfromContig85392	Not Available	624	Open in IMG/M
3300001213\|JGIcombinedJ13530_100270167	Not Available	1262	Open in IMG/M
3300001213\|JGIcombinedJ13530_100729963	Not Available	582	Open in IMG/M
3300002071\|JGIcombinedJ21915_10115497	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1051	Open in IMG/M
3300002071\|JGIcombinedJ21915_10247687	Not Available	618	Open in IMG/M
3300002549\|JGI24130J36418_10123896	Not Available	571	Open in IMG/M
3300002569\|JGI24136J36422_10185581	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	527	Open in IMG/M
3300005144\|Ga0068711_1002433	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	9302	Open in IMG/M
3300006052\|Ga0075029_101308919	Not Available	509	Open in IMG/M
3300006102\|Ga0075015_100069515	Not Available	1711	Open in IMG/M
3300006642\|Ga0075521_10553796	Not Available	565	Open in IMG/M
3300006795\|Ga0075520_1002468	All Organisms → cellular organisms → Bacteria	9221	Open in IMG/M
3300006795\|Ga0075520_1066800	Not Available	1688	Open in IMG/M
3300006795\|Ga0075520_1340424	Not Available	612	Open in IMG/M
3300006950\|Ga0075524_10073517	All Organisms → cellular organisms → Bacteria	1440	Open in IMG/M
3300009548\|Ga0116107_1197358	Not Available	530	Open in IMG/M
3300011997\|Ga0120162_1031412	Not Available	1480	Open in IMG/M
3300013427\|Ga0120106_1024448	Not Available	1230	Open in IMG/M
3300014160\|Ga0181517_10011178	All Organisms → cellular organisms → Bacteria	6938	Open in IMG/M
3300014160\|Ga0181517_10090919	Not Available	1790	Open in IMG/M
3300014160\|Ga0181517_10333342	All Organisms → cellular organisms → Archaea	790	Open in IMG/M
3300014160\|Ga0181517_10550128	Not Available	581	Open in IMG/M
3300014161\|Ga0181529_10005168	All Organisms → cellular organisms → Bacteria	13749	Open in IMG/M
3300014161\|Ga0181529_10054796	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium ADurb.BinA094	2776	Open in IMG/M
3300014161\|Ga0181529_10253529	Not Available	1003	Open in IMG/M
3300014161\|Ga0181529_10405541	Not Available	736	Open in IMG/M
3300014161\|Ga0181529_10733069	Not Available	508	Open in IMG/M
3300014490\|Ga0182010_10184027	Not Available	1089	Open in IMG/M
3300014491\|Ga0182014_10004486	All Organisms → cellular organisms → Bacteria	15971	Open in IMG/M
3300014492\|Ga0182013_10467771	Not Available	663	Open in IMG/M
3300014498\|Ga0182019_10518234	Not Available	828	Open in IMG/M
3300014502\|Ga0182021_11537307	All Organisms → cellular organisms → Bacteria	801	Open in IMG/M
3300014502\|Ga0182021_12394461	Not Available	635	Open in IMG/M
3300014502\|Ga0182021_12583175	Not Available	611	Open in IMG/M
3300014658\|Ga0181519_10359287	Not Available	901	Open in IMG/M
3300014658\|Ga0181519_10771364	Not Available	594	Open in IMG/M
3300014838\|Ga0182030_10114841	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3622	Open in IMG/M
3300017931\|Ga0187877_1241221	Not Available	699	Open in IMG/M
3300017946\|Ga0187879_10682345	Not Available	572	Open in IMG/M
3300017948\|Ga0187847_10439304	Not Available	720	Open in IMG/M
3300017948\|Ga0187847_10638862	Not Available	596	Open in IMG/M
3300017959\|Ga0187779_10094401	All Organisms → cellular organisms → Bacteria	1795	Open in IMG/M
3300017959\|Ga0187779_10818689	Not Available	636	Open in IMG/M
3300017974\|Ga0187777_11450958	Not Available	508	Open in IMG/M
3300017988\|Ga0181520_10051616	All Organisms → cellular organisms → Archaea	3906	Open in IMG/M
3300017988\|Ga0181520_10108778	Not Available	2352	Open in IMG/M
3300017988\|Ga0181520_10184134	Not Available	1658	Open in IMG/M
3300017988\|Ga0181520_10271341	Not Available	1285	Open in IMG/M
3300017988\|Ga0181520_10323413	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium ADurb.BinA094	1145	Open in IMG/M
3300017988\|Ga0181520_10358141	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	1071	Open in IMG/M
3300018033\|Ga0187867_10150386	All Organisms → cellular organisms → Archaea	1339	Open in IMG/M
3300018033\|Ga0187867_10339292	Not Available	837	Open in IMG/M
3300018035\|Ga0187875_10742534	Not Available	515	Open in IMG/M
3300018037\|Ga0187883_10273520	Not Available	863	Open in IMG/M
3300018043\|Ga0187887_10280366	All Organisms → cellular organisms → Bacteria → Terrabacteria group	985	Open in IMG/M
3300018043\|Ga0187887_10925450	Not Available	516	Open in IMG/M
3300018046\|Ga0187851_10081925	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2033	Open in IMG/M
3300018046\|Ga0187851_10086857	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1962	Open in IMG/M
3300018058\|Ga0187766_10553194	Not Available	781	Open in IMG/M
3300021861\|Ga0213853_10854654	Not Available	653	Open in IMG/M
3300023088\|Ga0224555_1101714	All Organisms → cellular organisms → Bacteria → Terrabacteria group	899	Open in IMG/M
3300025650\|Ga0209385_1024856	All Organisms → cellular organisms → Bacteria	2381	Open in IMG/M
3300025692\|Ga0209744_1103835	Not Available	973	Open in IMG/M
3300025725\|Ga0209638_1131303	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	835	Open in IMG/M
3300025739\|Ga0209745_1136331	Not Available	780	Open in IMG/M
3300025750\|Ga0209747_1142840	Not Available	768	Open in IMG/M
3300025764\|Ga0209539_1104936	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Dadabacteria → Candidatus Dadabacteria bacterium	1137	Open in IMG/M
3300025764\|Ga0209539_1238067	Not Available	652	Open in IMG/M
3300025764\|Ga0209539_1301272	Not Available	548	Open in IMG/M
3300025857\|Ga0209014_10140275	Not Available	896	Open in IMG/M
3300025857\|Ga0209014_10148460	Not Available	861	Open in IMG/M
3300025865\|Ga0209226_10045204	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1998	Open in IMG/M
3300025865\|Ga0209226_10096892	Not Available	1343	Open in IMG/M
3300025865\|Ga0209226_10153249	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1030	Open in IMG/M
3300025865\|Ga0209226_10445313	Not Available	515	Open in IMG/M
3300025878\|Ga0209584_10397463	Not Available	532	Open in IMG/M
3300025888\|Ga0209540_10235273	Not Available	1069	Open in IMG/M
3300027051\|Ga0209269_1000007	All Organisms → cellular organisms → Bacteria	550542	Open in IMG/M
3300028678\|Ga0302165_10175338	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium ADurb.BinA094	587	Open in IMG/M
3300028732\|Ga0302264_1038352	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium ADurb.BinA094	1109	Open in IMG/M
3300028733\|Ga0302261_1103582	Not Available	673	Open in IMG/M
3300028743\|Ga0302262_10010365	All Organisms → cellular organisms → Bacteria → Terrabacteria group	3366	Open in IMG/M
3300028743\|Ga0302262_10040723	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium ADurb.BinA094	1610	Open in IMG/M
3300028770\|Ga0302258_1044851	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium ADurb.BinA094	1036	Open in IMG/M
3300028777\|Ga0302290_10187903	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium ADurb.BinA094	551	Open in IMG/M
3300028813\|Ga0302157_10081533	Not Available	2102	Open in IMG/M
3300028869\|Ga0302263_10024517	All Organisms → cellular organisms → Bacteria	2349	Open in IMG/M
3300028870\|Ga0302254_10059779	All Organisms → cellular organisms → Bacteria	1377	Open in IMG/M
3300029952\|Ga0311346_10699746	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	879	Open in IMG/M
3300029984\|Ga0311332_11040999	Not Available	657	Open in IMG/M
3300029984\|Ga0311332_11104278	Not Available	638	Open in IMG/M
3300029987\|Ga0311334_11126142	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium ADurb.BinA094	656	Open in IMG/M
3300029988\|Ga0302190_10200379	Not Available	822	Open in IMG/M
3300029989\|Ga0311365_10472593	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1086	Open in IMG/M
3300029989\|Ga0311365_11636296	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium ADurb.BinA094	552	Open in IMG/M
3300030000\|Ga0311337_10048527	All Organisms → cellular organisms → Bacteria	3300	Open in IMG/M
3300030002\|Ga0311350_10086293	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium ADurb.BinA094	2750	Open in IMG/M
3300030002\|Ga0311350_10259900	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1547	Open in IMG/M
3300030003\|Ga0302172_10009812	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia	2738	Open in IMG/M
3300030014\|Ga0302175_10053147	All Organisms → cellular organisms → Bacteria → Terrabacteria group	880	Open in IMG/M
3300030114\|Ga0311333_10034779	All Organisms → cellular organisms → Bacteria	3544	Open in IMG/M
3300030114\|Ga0311333_11608356	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium ADurb.BinA094	562	Open in IMG/M
3300030491\|Ga0302211_10166466	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium ADurb.BinA094	648	Open in IMG/M
3300030491\|Ga0302211_10273772	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium ADurb.BinA094	502	Open in IMG/M
3300030943\|Ga0311366_10609459	All Organisms → cellular organisms → Bacteria	950	Open in IMG/M
3300031232\|Ga0302323_101253950	Not Available	830	Open in IMG/M
3300031344\|Ga0265316_10318021	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1131	Open in IMG/M
3300031344\|Ga0265316_10967447	Not Available	593	Open in IMG/M
3300031344\|Ga0265316_11045012	Not Available	567	Open in IMG/M
3300031521\|Ga0311364_10274871	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium ADurb.BinA094	1719	Open in IMG/M
3300031722\|Ga0311351_10612033	All Organisms → cellular organisms → Bacteria	829	Open in IMG/M
3300031726\|Ga0302321_100667125	All Organisms → cellular organisms → Bacteria	1164	Open in IMG/M
3300031902\|Ga0302322_101068237	Not Available	975	Open in IMG/M
3300031918\|Ga0311367_11131626	Not Available	779	Open in IMG/M
3300032018\|Ga0315272_10001871	All Organisms → cellular organisms → Bacteria	10380	Open in IMG/M
3300032256\|Ga0315271_10032324	All Organisms → cellular organisms → Bacteria	3675	Open in IMG/M
3300032828\|Ga0335080_12249861	Not Available	523	Open in IMG/M
3300032829\|Ga0335070_11657227	Not Available	581	Open in IMG/M
3300032893\|Ga0335069_10118912	All Organisms → cellular organisms → Bacteria	3313	Open in IMG/M
3300032897\|Ga0335071_10034613	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	5013	Open in IMG/M
3300032897\|Ga0335071_11863896	Not Available	545	Open in IMG/M
3300033402\|Ga0326728_10176461	Not Available	2225	Open in IMG/M
3300033405\|Ga0326727_10124479	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium ADurb.BinA094	3207	Open in IMG/M
3300033405\|Ga0326727_10231116	Not Available	1950	Open in IMG/M
3300033405\|Ga0326727_10250778	All Organisms → cellular organisms → Bacteria	1828	Open in IMG/M
3300033405\|Ga0326727_10532199	Not Available	1008	Open in IMG/M
3300033405\|Ga0326727_10623958	Not Available	889	Open in IMG/M
3300033755\|Ga0371489_0005908	All Organisms → cellular organisms → Bacteria	12928	Open in IMG/M
3300033755\|Ga0371489_0029568	All Organisms → cellular organisms → Bacteria	4102	Open in IMG/M
3300033827\|Ga0334848_050524	Not Available	760	Open in IMG/M
3300033982\|Ga0371487_0189456	Not Available	992	Open in IMG/M
3300033982\|Ga0371487_0306034	Not Available	713	Open in IMG/M
3300034091\|Ga0326724_0421551	Not Available	702	Open in IMG/M
3300034129\|Ga0370493_0262233	Not Available	587	Open in IMG/M
3300034195\|Ga0370501_0037835	Not Available	1495	Open in IMG/M
3300034195\|Ga0370501_0286100	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium ADurb.BinA094	592	Open in IMG/M
3300034195\|Ga0370501_0294446	Not Available	584	Open in IMG/M
3300034195\|Ga0370501_0302267	All Organisms → cellular organisms → Bacteria	577	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	96.53%
Host-Associated	Host-Associated	2.08%
Engineered	Engineered	1.39%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	70.14%
Aquatic	Environmental → Aquatic	26.39%
Plants	Host-Associated → Plants	2.08%
Lab Enrichment	Engineered → Lab Enrichment	1.39%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	36.81%
Peat	Environmental → Terrestrial → Peat	33.33%
Freshwater	Environmental → Aquatic → Freshwater	23.61%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.08%
Marine	Environmental → Aquatic → Marine	1.39%
Sediment	Environmental → Aquatic → Sediment	1.39%
Defined Media	Engineered → Lab Enrichment → Defined Media	1.39%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Peat → Unclassified	33.33%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	21.53%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	21.53%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	15.28%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.08%
Lake	Environmental → Aquatic → Freshwater → Lake	1.39%
Wetlands	Environmental → Aquatic → Marine → Wetlands	1.39%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.39%
Anaerobic Media	Engineered → Lab Enrichment → Defined Media → Anaerobic Media	1.39%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.69%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	33.33%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	21.53%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	20.83%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	9.72%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	5.56%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.08%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	1.39%
Sediment	Environmental → Aquatic → Marine → Wetlands → Sediment	1.39%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.39%
Unclassified	Engineered → Lab Enrichment → Defined Media → Anaerobic Media → Unclassified	1.39%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.69%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.69%

Habitat	Taxonomy	Distribution
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	22.22%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	18.06%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	11.81%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	9.03%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	7.64%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	3.47%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	3.47%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	3.47%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	2.78%
Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Soil	2.08%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	2.08%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	2.08%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	2.08%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	1.39%
Wetland	Environmental → Aquatic → Marine → Wetlands → Sediment → Wetland	1.39%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.39%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	1.39%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	1.39%
Enrichment Culture	Engineered → Lab Enrichment → Defined Media → Anaerobic Media → Unclassified → Enrichment Culture	1.39%
Watersheds	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Watersheds	0.69%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	0.69%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2088090004	Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Permafrost Layer P1	Environmental	Open in IMG/M
2124908028	Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Bog Site B3	Environmental	Open in IMG/M
2124908035	Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Bog Site B3	Environmental	Open in IMG/M
3300001213	Combined assembly of wetland microbial communities from Twitchell Island in the Sacramento Delta (Jan 2013 JGI Velvet Assembly)	Environmental	Open in IMG/M
3300002071	Barrow Graham LP Ref core NGADG0011-312 (Barrow Graham LP Ref core NGADG0011-312,NGADG0011-212, ASSEMBLY_DATE=20131010)	Environmental	Open in IMG/M
3300002549	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Ref core NGADG0002-212	Environmental	Open in IMG/M
3300002569	Arctic peat soil from Barrow, Alaska, USA - Barrow Graham LP Ref core NGADG0011-212	Environmental	Open in IMG/M
3300005144	Enrichment culture microbial communities from Arthur Kill intertidal strait, New Jersey, USA, that are MTBE-degrading - MTBE-AKM (Arthur Kill Methanogenic) MetaG	Engineered	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006102	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2013	Environmental	Open in IMG/M
3300006642	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-D	Environmental	Open in IMG/M
3300006795	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-B	Environmental	Open in IMG/M
3300006950	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE Permafrost154B-one	Environmental	Open in IMG/M
3300009548	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_100	Environmental	Open in IMG/M
3300011997	Permafrost microbial communities from Nunavut, Canada - A15_80cm_18M	Environmental	Open in IMG/M
3300013427	Permafrost microbial communities from Nunavut, Canada - A15_35cm_18M	Environmental	Open in IMG/M
3300014160	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_30_metaG	Environmental	Open in IMG/M
3300014161	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_30_metaG	Environmental	Open in IMG/M
3300014490	Permafrost microbial communities from Stordalen Mire, Sweden - 611E1M metaG	Environmental	Open in IMG/M
3300014491	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2D metaG	Environmental	Open in IMG/M
3300014492	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2M metaG	Environmental	Open in IMG/M
3300014498	Permafrost microbial communities from Stordalen Mire, Sweden - 812E2M metaG	Environmental	Open in IMG/M
3300014502	Permafrost microbial communities from Stordalen Mire, Sweden - 612E3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014658	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_10_metaG	Environmental	Open in IMG/M
3300014838	Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300017931	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_100	Environmental	Open in IMG/M
3300017946	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10	Environmental	Open in IMG/M
3300017948	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_10	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300017988	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_30_metaG	Environmental	Open in IMG/M
3300018033	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_10	Environmental	Open in IMG/M
3300018035	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_10	Environmental	Open in IMG/M
3300018037	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_10	Environmental	Open in IMG/M
3300018043	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_10	Environmental	Open in IMG/M
3300018046	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_10	Environmental	Open in IMG/M
3300018058	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MG	Environmental	Open in IMG/M
3300021861	Metatranscriptome of freshwater sediment microbial communities from post-fracked creek in Pennsylvania, United States - ABR_2016 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300023088	Peat soil microbial communities from Stordalen Mire, Sweden - 717 S2 30-34	Environmental	Open in IMG/M
3300025650	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-B (SPAdes)	Environmental	Open in IMG/M
3300025692	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Ref core NGADG0004-311 (SPAdes)	Environmental	Open in IMG/M
3300025725	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Ref core NGADG0002-211 (SPAdes)	Environmental	Open in IMG/M
3300025739	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Ref core NGADG0004-312 (SPAdes)	Environmental	Open in IMG/M
3300025750	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Ref core NGADG0011-311 (SPAdes)	Environmental	Open in IMG/M
3300025764	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Ref core NGADG0011-312 (SPAdes)	Environmental	Open in IMG/M
3300025857	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Ref core NGADG0002-212 (SPAdes)	Environmental	Open in IMG/M
3300025865	Arctic peat soil from Barrow, Alaska, USA - Barrow Graham LP Ref core NGADG0011-212 (SPAdes)	Environmental	Open in IMG/M
3300025878	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-D (SPAdes)	Environmental	Open in IMG/M
3300025888	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Incubations 011-21A (SPAdes)	Environmental	Open in IMG/M
3300027051	Enrichment culture microbial communities from Arthur Kill intertidal strait, New Jersey, USA, that are MTBE-degrading - MTBE-AKM (Arthur Kill Methanogenic) MetaG (SPAdes)	Engineered	Open in IMG/M
3300028678	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_E3_2	Environmental	Open in IMG/M
3300028732	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Fen_N3_4	Environmental	Open in IMG/M
3300028733	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Fen_E2_4	Environmental	Open in IMG/M
3300028743	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Fen_E3_4	Environmental	Open in IMG/M
3300028770	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_N2_4	Environmental	Open in IMG/M
3300028777	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Fen_N1_3	Environmental	Open in IMG/M
3300028813	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N3_3	Environmental	Open in IMG/M
3300028869	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Fen_N1_4	Environmental	Open in IMG/M
3300028870	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_E1_4	Environmental	Open in IMG/M
3300029952	II_Bog_N3 coassembly	Environmental	Open in IMG/M
3300029984	I_Fen_E1 coassembly	Environmental	Open in IMG/M
3300029987	I_Fen_E3 coassembly	Environmental	Open in IMG/M
3300029988	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_E2_3	Environmental	Open in IMG/M
3300029989	III_Fen_N1 coassembly	Environmental	Open in IMG/M
3300030000	I_Fen_N3 coassembly	Environmental	Open in IMG/M
3300030002	II_Fen_N1 coassembly	Environmental	Open in IMG/M
3300030003	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_N2_3	Environmental	Open in IMG/M
3300030014	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_N3_3	Environmental	Open in IMG/M
3300030114	I_Fen_E2 coassembly	Environmental	Open in IMG/M
3300030491	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Fen_E3_3	Environmental	Open in IMG/M
3300030838	I_Fen_N1 coassembly	Environmental	Open in IMG/M
3300030943	III_Fen_N2 coassembly	Environmental	Open in IMG/M
3300031232	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_3	Environmental	Open in IMG/M
3300031344	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG	Host-Associated	Open in IMG/M
3300031521	III_Fen_E2 coassembly	Environmental	Open in IMG/M
3300031722	II_Fen_N3 coassembly	Environmental	Open in IMG/M
3300031726	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_1	Environmental	Open in IMG/M
3300031902	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_2	Environmental	Open in IMG/M
3300031918	III_Fen_N3 coassembly	Environmental	Open in IMG/M
3300032018	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C3_middle	Environmental	Open in IMG/M
3300032256	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C3_top	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300032829	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.3	Environmental	Open in IMG/M
3300032893	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1	Environmental	Open in IMG/M
3300032897	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.5	Environmental	Open in IMG/M
3300033402	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB31MN	Environmental	Open in IMG/M
3300033405	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB29MY	Environmental	Open in IMG/M
3300033755	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB26FY SIP fraction	Environmental	Open in IMG/M
3300033827	Peat soil microbial communities from Stordalen Mire, Sweden - 714 E2 5-9	Environmental	Open in IMG/M
3300033982	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB22AY SIP fraction	Environmental	Open in IMG/M
3300034091	Peat soil microbial communities from McLean, Ithaca, NY, United States - MB00N	Environmental	Open in IMG/M
3300034129	Peat soil microbial communities from wetlands in Alaska, United States - Sheep_creek_fen_01D_16	Environmental	Open in IMG/M
3300034195	Peat soil microbial communities from wetlands in Alaska, United States - Sheep_creek_fen_01D_17	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
P1_DRAFT_00191560	2088090004	Soil	MALLSGSVEADVPIQFADREWSEFVWRSLYGSYAKGFDDVAASLSETDADSGTVTFETEGDRLVKVSVEVEYSPRAGGDAAAEVAQAQARLERDLKKYRIFLLRRCEQESCRPS
beta3_all_00575590	2124908028	Soil	MAILSGSVEADVPIQFADREWSEFVWRSLYGNFAKGFAEYSSSITETDADSGTVKFETEGERLVRVTVEVDYTPRSQSDPQAEVLLAQARLDRDLAKYRDFLVHRCEQEDCRPGRLSA
B3_GZOS_CLC_00796220	2124908035	Soil	MAILSGSVEADVPIQFADREWSEFVWRSLYGNFAKGFGEYSSSITETDADSGTVKFETEGERLVRVTVEVDYTPRSQSDPQAEVLLAQARLERDLAKYRDFLVHRCEQESCRPGTLSA
JGIcombinedJ13530_1002701672	3300001213	Wetland	MAVIKGSVEADVPVAFADEEWTEFVFRSLYGNYEKGFEDVAASLAEIDADAGTVTFETEPDGRVRIAVEAQYTPRGADPSADVAHAQSWLEHDLEKYRVFLLRRCEQESCRSN*
JGIcombinedJ13530_1007299633	3300001213	Wetland	MAVLRGAVEADVPIQFADREWTEFVFRSLYGSYAKGFEDVAVDLADVDADSGKVTFETEGDRLVKVSVEVEYTPRRGADATAEVAAAQARLDRDLEKYRVFLIRRCE
JGIcombinedJ21915_101154971	3300002071	Arctic Peat Soil	MLPNEGIAWIARERDVPVAFADREWTEFVFRSLYGSYAKGFSDVATSLSETDADSGSVTFETEGDRLVKVSVEIEYTPHSGGDPAAEVAQAQARLKRDL
JGIcombinedJ21915_102476871	3300002071	Arctic Peat Soil	MSLLKGSVEADVPIQFADREWSEFVWRSLYGSYAKGFEDVATALSETDADSGTVTFETEGDRLVKVSVEVEYTPRAGGDAVAEVAQAQARLERDLEKYRVFLLRRCEQESCRPS*
JGI24130J36418_101238962	3300002549	Arctic Peat Soil	MAVLRGTVEADVPIAFADKEWTEFVFRSLYGNYAKGFEDVAASVNETDADSGTVTFETEGDRLVKVSIEVEYTPHSGGDPTVEVAHAQAQLERDLEKYRVFLLRRCEQETCRPD*
JGI24136J36422_101855812	3300002569	Arctic Peat Soil	ARARQTVSQGDDVALLKGSVEADVXIQXADKVWSEFIRRSLYGSCAKGFDDVAASLSEIDADDGTVTFEMAGDRLVKVSVELEYTPRATGDAAAEVAQAQARLERDLEKYRVFLLRRCDQESRRPT*
Ga0068711_10024337	3300005144	Enrichment Culture	VPVRFADQEWTEFVFRALYGSYAKGFAEVASSINETDADSGTVTFEAEGDRLVRVLVEAEYTPRRGTGAYEEVATAQEHLEHDLEKYRIFVLKRCEQESCRAS*
Ga0075029_1013089192	3300006052	Watersheds	PIAFADKEWTEFVFRSLYGNYAKGFEDVVASVSETDADSGTVTFETEGDRLVKVSVEVEYTPRRGADAATEVAAAQARLERDLEKYRVFLLRRCEQESCRTD*
Ga0075015_1000695152	3300006102	Watersheds	DVPIAFADKEWTEFVFRSLYGNYAKGFEDVAASVSETDADSGSVTFETEGDRVVRVSVEVEYTPHTGGDPSAEVAHAQAQLERDLEKYRVFLLRRCEQESCRPA*
Ga0075521_105537962	3300006642	Arctic Peat Soil	MAVLSGTVEADVPIQFADKEWTEFVFRSLYGNYAKGFEDVAASVSETDADSGTVTFETEGDRLVKVSVEVEYTPRASGDAAAAEVSHAQTRLEHDLEKYRVFLLRRCE
Ga0075520_100246811	3300006795	Arctic Peat Soil	MAVLSGTVEADVPIQFADKEWTEFVFRSLYGNYAKGFEDVAASVSETDADSGTVTFETEGDRLVKVSVEVEYTPRASGDAAAAEVSHAQTRLEHDLEKYRVFLLRRCEQESCR
Ga0075520_10668002	3300006795	Arctic Peat Soil	MAVLSGSIEADVPIAFADREWTEFVFRSLYGNFAQGFSGEVSSINETDADSGTVKFETEGDRLVKVSVEVEYTPRSKDSADAEVAQAQARLNRDLVKYRAFLLKRCEQESCRTS*
Ga0075520_13404242	3300006795	Arctic Peat Soil	MAILSGSVEADVPIQFADREWSEFVWRSLYGNFAKGFAEYSSSITETDADSGTVKFETEGERLVRVTVEVDYTPRSQSDPQAEVLLAQARLDRDLAKYRDFLVHRCEQESCRPGRLSD*
Ga0075524_100735173	3300006950	Arctic Peat Soil	MALLSGSVEADVPIQFADREWSEFVWRSLYGSYAKGFDDVAASLSETDADSGTVTFETEGDRLVKVSVEVEYSPRAGGDAAAEVAQAQARLERDLKKYRIFLLRRCEQESCRPS*
Ga0116107_11973581	3300009548	Peatland	TQILTLAPIADGNTPNAHSRGDHAGQSRIEGDIMAILSGSIEADVPIAFADREWTEFVFRNLYGNYAKGFADVAASINETDADSRTVKFETEGDRLVKVSVELEYTPRAGGETGEEVARAQARLNRDLEKYRTFLLRRCEQESCRTA*
Ga0120162_10314123	3300011997	Permafrost	MAVLSGTVEAEVPIQFADKEWTEFVFRSLYGNYAKGFEDVAASVNEIDADSGTVTFETEGDRLVKVSVAVEYTPHSGGDPTAEVAHAQAQLERDLEKYRVFLLRRCEQESCRTD*
Ga0120106_10244481	3300013427	Permafrost	MAVLSGTVEAEVPIQFADKEWTEFVFRSLYGNYAKGFEDVAASVNEIDADSGTVTFETEGDRLVKVSVAVEYTPHSGGDPTAEVAHAQAQLE
Ga0181517_100111783	3300014160	Bog	MAILSGSIEADVPIAFADREWTEFVFRNLFGNYAKGFEDIAASINETDADSGTVKFETEGDRLVKVSVELQYTPRAGGDPDEEVVRAQAHLERDLEKYRAFLVKRCEQESCRAA*
Ga0181517_100909192	3300014160	Bog	MAILSGSIEADVPIAFADREWTEFVFRNLYGNYAKGFEEVAASINETDADSGTVQFETEGDRLVKVSVELEYTPHSGGDANAEVARAQARLNGDLEKYRTFLLKRCEQESCRPS*
Ga0181517_103333421	3300014160	Bog	VPIAFADREWTEFVFRNLYGNYAKGFEDVATSINETDADSGTVHFETEGERLVKVSVELEYTPHGGGDAKAEVARAQARLNGDLEKYRTFLLKRCEQESCRPS*
Ga0181517_105501281	3300014160	Bog	MAILKGSIEADVPITFADREWSEFMWRSLYGSFAKGFTDVADASVSAIDADSGTVTFETEGERLVKVSVEVKFTPRADADRDRQIAHAQAQLERDLEKYRTFLLRRCE
Ga0181529_100051681	3300014161	Bog	MAILSGSIEADVPIAFADREWTEFVFRNLFGNYAKGFEDIAASINETDADSGTVKFETEGDRLVKVSVELQYTPRAGGDPDEEVVRAQAHLERDLEKYRAFLVKR
Ga0181529_100547962	3300014161	Bog	MATLKGSIEADVPITFADREWSEFMWRSLYGSFAKGFAEVADASVSAIDAESGTVTFETEGERLVKVTVEVKFVPRADADRDQEIVRAQAQLERDLEKYRTFLLKRCEQESCRADAAL*
Ga0181529_102535292	3300014161	Bog	MAILKGSIEADVPITFADREWSEFMWRSLYGSFAKGFTDVADASVSEIDADSGTVTFETEGERLVKVSVEVKFIPRADADRDQEIARAQAQLERDLDKYRTFLLKRCEQEDCRVDSAP*
Ga0181529_104055411	3300014161	Bog	MAILSGSIEADVPIAFADREWTEFVFRNLYGNYAKGFEDVATSINETDADSGTVQFETEGDRLVKVSVELEYTPHSGGDANAEVARAQARLNGDLEKYRTFLLKRCEQESCRPS*
Ga0181529_107330691	3300014161	Bog	MAILKGSIEADVPITFADREWSEFMWRSLYGNFAKGFTDVADVSASAIDADSGTVTFETEGERLVKVSVEVKYVPREGADRDAEIARAQAQLDGDLEKYRHFLLKRCEQE
Ga0182010_101840271	3300014490	Fen	SGSIEADVPIAFADREWTEFVFRNLYGNYAKGFADVAASINESDADSGTVKFETEGERLVKVSVELEYTARAGGDPGEEVSRAQARLDRDLERYRTFLLKRCEQESCRTS*
Ga0182014_100044867	3300014491	Bog	MGTLWESHRLATERGGAQPKGDIMAILSGSIEADVPIAFADREWTEFVFRNLYGNYAKGFADVAASINESDADSGTVKFETEGERLVKVSVELEYTARAGGDPGEEVSRAQARLDRDLERYRTFLLKRCEQESCRTS*
Ga0182013_104677712	3300014492	Bog	ATERGGAQPKGDIMAILSGSIEADVPIAFADREWTEFVFRNLYGNYAKGFADVAASINESDADSGTVKFETEGERLVKVSVELEYTARAGGDPGEEVSRAQARLDRDLERYRTFLLKRCEQESCRTS*
Ga0182019_105182341	3300014498	Fen	MTVLKGSVEADVPIAFADKEWTEFVFRSLYGNYAKGFEDVATSVNETDADAGSVTFETEGDRLVKVSVSVEYTPHSGSDPAAEVAHAQAQLERDLEKYRVFLVRRCEQESCRPA*
Ga0182021_115373072	3300014502	Fen	MAVLKGSVEAEVPAAFADQEWTEFVFRSLYGSYERGFEDVATSLAETDAESGTVTFETEGERLVKIAVEVEYTPRGGDPSADIARAQERLERDLDKYRTFVLRRCDQESCRAN*
Ga0182021_123944611	3300014502	Fen	MAVLKGSVEADVPIKFADKEWTEYMLRSLYGSYTTGSADVAASLSELDADSGTVTFRSEGDQQVRVSVELEYTPRGRADASEDVIKAQKELDRDLEKYRTFLLRRCEQEHCRAA*
Ga0182021_125831751	3300014502	Fen	TVVEGAIMAVLSGSIEADVPIAFADREWTEFVFRSLYGNFAQGFSGEVSSINETDADSGTVKFETEGDRLVKVSVEVEYTPRSKDSADAEIAQAQARLNRDLVKYRAFLLKRCEQESCRTS*
Ga0181519_103592871	3300014658	Bog	MAILKGSIEADVPITFADREWSEFMWRSLYGSFAKGFTDVADASVSAIDADSGTVTFETEGERLVKVTVEVKFVPRADADRDQEIVRAQAQLERDLEKYRTFLLKRCEQESCRADAAL*
Ga0181519_107713641	3300014658	Bog	MAILSGSIEADVPIAFADREWTEFVFRNLYGNYAKGFEDVATSINETDADSGTVHFETEGERLVKVSVELEYTPHGGGDAKAEVARAQARLNGDLEKYRTFLLKRCEQESCRPS*
Ga0182030_101148415	3300014838	Bog	VVATQFCYRRESMATLKGSIEADVPITFADREWSEFMWRSLYGSFAKGFAEVADASVSAIDAESGTVTFETEGERLVKVTVEVKFVPRADADRDQEIVRAQAQLERDLEKYRTFLLKRCEQESCRADAAL*
Ga0187877_12412211	3300017931	Peatland	MAILSGSIEADVPIAFADREWTEFVFRNLYGNYAKGFEDVATSINETDADSGTVHFETEGERLVKVSVELEYTPHGGGDAKAEVARAQARLNVDLEKYRTFLLKRCEQESCRPS
Ga0187879_106823452	3300017946	Peatland	MAILSGSIEADVPIAFADREWTEFVFRNLYGNYAKGFEEVSSSVTESEADSGTVKLETEGERLIKVSVELEYTPHGGGDADAEIAQAQARLEHDLKRYRTFLLKRCEQESCRPS
Ga0187847_104393041	3300017948	Peatland	MAILKGSIEADVPITFADREWSEFMWRSLYGSFAKGFTDVADASVSEIDADSGTVTFETEGERLVKVSVEVKFVPRADADRDLEIARAQAQLERDLDKYRTFLLKRCEQEDCRVDSAP
Ga0187847_106388621	3300017948	Peatland	MAILSGSIEADVPIAFADREWTEFVFRNLYGNYAQGFDDVAASLNETDADSGTVKFETEGDRLVRVSVEVTYTPRTQADASEEVVRAQARLNRDLEKYRTFLLRRCEQENCRPS
Ga0187779_100944013	3300017959	Tropical Peatland	MSMLRGSIEADVPIQFADREWSEFVWRSLYGSFSRELSGDASNINETDADSGTVTFETKGDQLVKVSVEIEYTPHHGGDPAVETARAKARLDRDLQKYRDFLLKRCEQESCRTN
Ga0187779_108186891	3300017959	Tropical Peatland	GSIEADVPIAFADREWTEFVFRNLYGNYAKGFDDVAASINETDADSGTVKFETEGDRLIKVSVELEYTPRARDNPDEDVARAQARLNHDLEKYRIFLLRRCEQESCRPTEAA
Ga0187777_114509581	3300017974	Tropical Peatland	LARLNVIDRCGTTKADREWTEFVFRNLYGNYAKGFDDVAASINETDADSGTVKFETEGDRLIKVSVELEYTPRARDNPDEDVARAQARLNHDLEKYRIFLLRRCEQESCRPTEAA
Ga0181520_100516162	3300017988	Bog	MAILSGSIEADVPIAFADREWTEFVFRNLYGNYAKGFEEVAASINETDADSGTVQFETEGDRLVKVSVELEYTPHSGGDANAEVARAQARLNGDLEKYRTFLLKRCEQESCRPS
Ga0181520_101087783	3300017988	Bog	MAILSGSIEADVPIAFADREWTEFVFRNLYGNYAKGFEDVATSINETDADSGTVHFETEGERLVKVSVELEYTPHGGGDAKAEVARAQARLNGDLEKYRTFLLKRCEQESCRPS
Ga0181520_101841343	3300017988	Bog	MATLKGSIEADVPITFADREWSEFMWRSLYGSFAKGFAEVADASVSAIDAESGTVTFETEGERLVKVTVEVKFVPRADADRDQEIVRAQAQLERDLEKYRTFLLKRCEQESCRADAAL
Ga0181520_102713412	3300017988	Bog	MAILKGSIEADVPITFADREWSEFMWRSLYGSFAKGFTDVADASVSAIDADSGTVTFETEGERLVKVSVEVKFIPRADADRDQEIARAQAQLERDLDKYRTFLLKRCEQEDCRVDSAP
Ga0181520_103234131	3300017988	Bog	MAILKGSIEADVPITFADREWSEFMWRSLYGNFAKGFTDVADVSASAIDADSGTVTFETEGERLVKVSVEVKYVPREGADRDAEIARAQAQLDGDLEKYRHFLLKRCEQENCRRVDSPS
Ga0181520_103581413	3300017988	Bog	MAILSGSIEADVPIAFADREWTEFVFRNLFGNYAKGFEDIAASINETDADSGTVKFETEGDRLVKVSVELQYTPRAGGDPDEEVVRAQAHLERDLEKYRAFLVKRCEQESCRAA
Ga0187867_101503862	3300018033	Peatland	MAILSGSIEADVPIAFADREWTEFVFRNLYGNYAKVFEDVATSINETDADSGTVQFETEGDRLVKVSIELEYTPHSGGDAKAEVARAQVRLNGDLEKYRTFLLKRCEQESCRPS
Ga0187867_103392922	3300018033	Peatland	MAILSGSIEADVPIAFADREWTEFVFRNLYGNYAKGFEDVAASINETDADSGTVQFETEGDRLVKVAVELEYTPHGGGDAKAEIARAQARLNGDLEKYRTFLLKRCEQESCRPS
Ga0187875_107425341	3300018035	Peatland	MAVLSGSIEADVPIAFADREWTEFVFRNLYGNYAKGFAEVDSSVSESDADSGTVRLETKGERLVEVSVELQYTPHTGGDAGDEIARAQARLDHDLERYRAFLLKRCEQESCRAA
Ga0187883_102735201	3300018037	Peatland	MAILSGSIEADVPIAFADREWTEFVFRNLYGNYAKGFEDVATSINETDADSGTVQFETEGERLVKVSVELEYTPHGGGDAKAEVARAQARLDGDLEKYRTFLLKRCEQESCRPS
Ga0187887_102803662	3300018043	Peatland	MATLKGSIEADVPITYADREWSEFMWRSLYGSFAKGFTDVADASVSAIDADSGTVTFETEGERLVKVSVEVKFVPREDANRDQEIARAQAQMERDLEKYRTFLLRRCEQDSCRTEVSQDAGRGE
Ga0187887_109254501	3300018043	Peatland	MAILSGSIEADVPIAFADREWTEFVFRNLYGNYAKGFEDVATSINETDADSGTVQFETEGERLVKVSVELEYTPHGGGDAKAEVARAQARLNGDLEKYRTFLLKRCEQESCRPS
Ga0187851_100791235	3300018046	Peatland	MAILSGSIEADVPIAFADREWTEFVFRNLYGNYAKGFEEVAASINETDADSGTVQFETEGDRLVKVSVELEYTPHSGGDANAEVARAQARLN
Ga0187851_100819251	3300018046	Peatland	MAILSGSIEADVPIAFADREWTEFVFRNLFGNYAKGFEDIAASINETDADSGTVKFETEGDRLVKVSVELQYTPRAGGDPDEEVVRAQAHLERDLEKYRAF
Ga0187851_100868571	3300018046	Peatland	DVPITFADREWSEFMWRSLYGSFARGFTEVADASVSAIDADSGTVTFETEGERLVKVSVEVKFVPREDANRDQEIARAQAQMERDLEKYRTFLLRRCEQDSCRTEVSQDAGRGE
Ga0187766_105531941	3300018058	Tropical Peatland	EHNRSRGDVMAILSGSIEADVPIAFADREWTEFVFRNLYGNYAKGFDDVAASINETDADSGTVKFETEGDRLIKVSVELEYTPRARDNPDEDVARAQARLNHDLEKYRIFLLRRCEQESCRPTEAA
Ga0213853_108546542	3300021861	Watersheds	MAVLRGSVEADVPIQFADREWSEFVWRSLYGNYAKGFDDVASSINETDADSGTVMFQTEGDRLVKVSVELEYTPRSRSNPDGEVAQAQARLDRDLQKYHAFLLRRCEQESCRVS
Ga0224555_11017142	3300023088	Soil	MAILCGSVEADVPIQFADREWSEFVWRSLYGNFAKGFGEYSSSITETDADSGTVKFETEGDRLVRVTVEVDYTPRSQSDPQAEVRLAQTRLDRDLAKYRDFLVHRCEQESCRPSQPSA
Ga0209385_10103173	3300025650	Arctic Peat Soil	VEADVPIAFADKEWTEFVFRSLYGNCAKGFEDLAVSVSETDADPGTVNLETDGDRLVTVSVEVEYKPRASGEAAAAEVAQAQTRLGRDLE
Ga0209385_10248563	3300025650	Arctic Peat Soil	MAVLSGTVEADVPIQFADKEWTEFVFRSLYGNYAKGFEDVAASVSETDADSGTVTFETEGDRLVKVSVEVEYTPRASGDAAAAEVSHAQTRLEHDLEKYRVFLLRRCEQESCRTD
Ga0209744_11038351	3300025692	Arctic Peat Soil	MAVLSGAVEADVPIQFADQEWTEFMFRSLYGSYAKGFEDVAADLADVDADSGKVTFETEGDRLVKVSVEVEYTPRRGADAANEVAAAQARLERDLEKYRVFLLRRCEQESCRTD
Ga0209638_11313031	3300025725	Arctic Peat Soil	MAVLRGTVEADVPIAFADKEWTEFVFRSLYGNYAKGFEDVAASVNETDADSGTVTFETEGDRLVKVSIEVEYTPHSGGDPTVEVAHAQAQLERDLEKYRVFLLRRCEQETCRPD
Ga0209745_11363311	3300025739	Arctic Peat Soil	VSQGDDVALLKGSVEADASIQFADKVWSEFIRRSLYGSCAKGFDDVAASLSEIDADDGTVTFETAGDRLVKVSVELEYTPRATGDAAAEVAQAQARLERDLEKYRVFLLRRCDQESRRPT
Ga0209747_11428401	3300025750	Arctic Peat Soil	MAVLSGTVEADVPIQFADKEWTEFVFRSLYGNYAKGFEDVAASVSETDADSGTVTFETEGDRLVKVSVEVEYTPRASGEAGAAEVKHAQTRLEHDLEKYRVFLLRRCEQESCRPS
Ga0209539_11049361	3300025764	Arctic Peat Soil	QFADRVWNEFIRRSMYGGYAKGFEDVAASLSEIDADSGTVTFETAVGQPVKVSVELEYTPRAGGDAARNIAQAQTRLERDLEKYRVFLLRRCEQESCRPT
Ga0209539_12380671	3300025764	Arctic Peat Soil	PTTASLGSHVDGDSVSWTSHDERARPTASQGDDMSLLKGSVEADVPIQFADREWSEFVWRSLYGSYAKGFEDVATALSETDADSGTVTFETEGDRLVKVSVEVEYTPRAGGDAVAEVAQAQARLERDLEKYRVFLLRRCEQESCRPS
Ga0209539_13012721	3300025764	Arctic Peat Soil	MAVLSGTVEADVPIQFADKEWTEFVFRSLYGNYAKGFEDVAASVSETDADSGTVTFETEGDRLVKVSVEVEYTPRASGEAGAAEVKHAQTRLEHDLEKYRVFLVRRCEQESCRPT
Ga0209014_101402751	3300025857	Arctic Peat Soil	MALLRGSVEADVPIQFADREWSEFVWRSLYGSYAKGFEDVVASLSETDADSGTVTVEIEYSPRAGGDATAEVAQAQARLERDLEKYRVFLVRRCEQESCRPS
Ga0209014_101484602	3300025857	Arctic Peat Soil	MAVLKGAVEADVPIQFADKEWTEFMFRSLYGSYAKGFEDVAASLSETDADSGSVTFETEGDRLVKVSVEIEYTPRKGADATAEVAAAQARLERDLEKYRVFLVRRCEQESCRTD
Ga0209226_100452042	3300025865	Arctic Peat Soil	VSQGDDVALLKGSVEADVPIQFADKVWSEFIRRSLYGSCAKGFDDVAASLSEIDADDGTVTFEMAGDRLVKVSVELEYTPRATGDAAAEVAQAQARLERDLEKYRVFLLRRCDQESLRPT
Ga0209226_100968921	3300025865	Arctic Peat Soil	MAVLSGAVEADVPIQFADREWTEFIFRSLYGSYAKGFEDVAADLADVDADSGKVTFETEGDRLVKVSVEVEYTPRRGAGADAEVAAAQARLERDLEKYRVFLLRRCEQESCRTD
Ga0209226_101532491	3300025865	Arctic Peat Soil	MLPNEGIAWIARERDVPVAFADREWTEFVFRSLYGSYAKGFSDVATSLSETDADSGSVTFETEGDRLVKVSVEIEYTPHSGGDPAAEVAQAQARLKRDLEKYRVFLLRRCEQESCRPS
Ga0209226_104453131	3300025865	Arctic Peat Soil	HVDGDSVSWTSHDERARPTASQGDDMSLLKGSVEADVPIQFADREWSEFVWRSLYGSYAKGFEDVATALSETDADSGTVTFETEGDRLVKVSVEVEYTPRAGGDAVAEVAQAQARLERDLEKYRVFLLRRCEQESCRPS
Ga0209584_103974631	3300025878	Arctic Peat Soil	MAVLSGTVEADVPIQFADKEWTEFVFRSLYGNYAKGFEDVAASVSETDADSGTVTFETEGDRLVKVSVEVEYTPRASGEAVAAEVKHAQTRLEHDLEKYRVFLLRRCE
Ga0209540_102352731	3300025888	Arctic Peat Soil	MSLLKGSVEADVPIQFADREWSEFVWRSLYGSYAKGFEDVATALSETDADSGTVTFETEGDRLVKVSVEVEYTPRAGGDAVAEVAQAQARLERDLEKYRVFLLRRCEQESCRPS
Ga0209269_1000007221	3300027051	Enrichment Culture	VPVRFADQEWTEFVFRALYGSYAKGFAEVASSINETDADSGTVTFEAEGDRLVRVLVEAEYTPRRGTGAYEEVATAQEHLEHDLEKYRIFVLKRCEQESCRAS
Ga0302165_101753381	3300028678	Fen	EFVFRSLYGSYERGFEDVATSLAETDAESATVTFETEGERLVKIAVEVEYTPRGSDLSADVARAQARLERDLDKYRTFVLRRCDQESCRSN
Ga0302264_10383521	3300028732	Fen	TEFVFRSLYGSYERGFEDVATSLAETDAESATVTFETEGERLVKIAVEVEYTPRGSDLSADVARAQARLERDLDKYRTFVLRRCDQESCRSN
Ga0302261_11035821	3300028733	Fen	MAVLKGSVEADVPAAFADQEWTEFVFRSLYGSYERGFEDVATSLAETDAESATVTFETEGERLVKIAVEVEYTPRGSDLSADVARAQARLERDLDKYRTFVLRRCDQESCRSN
Ga0302262_100103651	3300028743	Fen	MAVLKGSVEADVPVAFADQEWTEFVFRSLYGNYARGFEDVATSLAETDAESGTVTFETEGERLVKIAVEVEYTPRGGDPSADIARAQERLERDLDKYRTFVLRRCDQE
Ga0302262_100407232	3300028743	Fen	ADVPAAFADQEWTEFVFRSLYGSYERGFEDVATSLAETDAESATVTFETEGERLVKIAVEVEYTPRGSDLSADVARAQARLERDLDKYRTFVLRRCDQESCRSN
Ga0302258_10448512	3300028770	Fen	MAVLKGSVEADVPVAFADQEWTEFVFRSLYGNYARGFEDVATSLAETDAESGTVTFETEGERLVKIAVEVEYTPRGSDLSADVARAQARLERNLDKYRTFVLRRCDQESCRSN
Ga0302290_101879032	3300028777	Fen	MAVLKGSVEADVPVAFADQEWTEFVFRSLYGNYARGFEDVATSLAETDAESGTVTFETEGERLVKIAVEVEYTPRGGDPSADIARAQERLERDLDKYRTFVLRRCDQESCRAN
Ga0302157_100815331	3300028813	Bog	WSEFMWRSLYGSFAKGFAEVADASVSAIDAESGTVTFETEGERLVKVTVEVKFVPRADADRDQEIVRAQAQLERDLEKYRTFLLKRCEQESCRADAAL
Ga0302263_100245173	3300028869	Fen	MAVLKGSVEADVPAAFADQEWTEFVFRSLYGSYERGFEDVATSLAETDAESGTVTFETEGERLVKIAVEVEYTPRGSDLSADVARAQARLERDLDKYRTFVLRRCDQESCRSN
Ga0302254_100597792	3300028870	Fen	MAVLKGSVEADVPIKFADKEWTEYMLRSLYGSYTTGSADVAASLSELDADSGTVTFRSEGDQQVRVSVELEYTPRGRADASEDVIKAQKELDRDLEKYRTFLLRRCEQEHCRAA
Ga0311346_106997461	3300029952	Bog	TMAILSGSIEADVPIAFADREWTEFVFRNLFGNYAKGFEDIAASINETDADSGTVKFETEGDRLVKVSVELQYTPRAGGDPDEEVVRAQAHLERDLEKYRAFLVKRCEQESCRAA
Ga0311332_110409991	3300029984	Fen	MAVLSGSVEADVPIQFADQEWTEFMFRSLYGSYAKGFEDVAADLADVDADSGKVTFETEGDRLVKVSVEVEYTPRRGADAATEVAAAQARLERDLEKYRVFLLRRCEQESCRTD
Ga0311332_111042781	3300029984	Fen	MAVLSGTVEADVPIQFADKEWTEFVFRSLYGNYAKGFEDVAASVSETDADSGTVTFETEADRLVKVSVEVEYTPRASGEAGAAEVTQAQARLEHDLEKYRVFLLRRCEQENCRPK
Ga0311334_111261421	3300029987	Fen	KGSVEADVPVAFADQEWTEFVFRSLYGNYARGFEDVATSLAETDAESGTVTFETEGERLVKIAVEVEYTPRGGDPSADIARAQERLERDLDKYRTFVLRRCDQESCRAN
Ga0302190_102003792	3300029988	Bog	EWSEFMWRSLYGSFAKGFAEVADASVSAIDAESGTVTFETEGERLVKVTVEVKFVPRADADRDQEIVRAQAQLERDLEKYRTFLLKRCEQESCRADAAL
Ga0311365_104725931	3300029989	Fen	MAVLKGSVEADVPIKFADKEWTEYMLRSLYGSYTTGSADVAASLSELDADSGTVTFRSEGDQQVRVSVELEYTPRDRADASEDVIKAQKELDRDLEKYRTFLLRRCEQEHCRAA
Ga0311365_116362962	3300029989	Fen	VLKGSVEADVPVAFADQEWTEFVFRSLYGSYERGFEDVATSLAEMDADSGTVAFETEGERLVKVAVEVEYTPRGGDPSADIARAQARLERDLDKYRTFVLRRCDQESCRAN
Ga0311337_100485273	3300030000	Fen	MAVLKGSVEADVPAAFADQEWTEFVFRSLYGSYERGFEDVATSLAETDAESATVTFETEGERLVKIAVEVDYTPRGSDLSADVARAQARLERDLDKYRTFVLRRCDQESCRSN
Ga0311350_100103461	3300030002	Fen	VFRSLYGSYERGFEDVATSLAETDAESATVTFETEGERLVKIAVEVEYTPRGSDLSADVARAQARLERDLDKYRTFVLRRCDQESCRSN
Ga0311350_100862934	3300030002	Fen	MAVLKGSVEADVPVAFADQEWTEFVFRSLYGSYERGFEDVATSLAEMDADSGTVAFETEGERLVKVAVEVEYTPRGGDPSADIARAQARLERDLDKYRTFVLRRCDQESCRAN
Ga0311350_102599001	3300030002	Fen	MAVLSGTVEADVPIQFADKEWTEFVFRSLYGNYAKGFEDVAASVSETDADSGTVTFETEADRLVKVSVEVEYTPRASGEAGAAEVTQAQVRLEHDLEK
Ga0302172_100098125	3300030003	Fen	MAVLKGSVEADVPVAFADQEWTEFVFRSLYGNYARGFEDVATSLAETDAESGTVTFETEGERLVKIAVEVEYTPRGGDPSADIARAQERLER
Ga0302175_100531471	3300030014	Fen	MAVLKGSVEADVPVAFADQEWTEFVFRSLYGNYARGFEDVATSLAETDAESGTVTFETEGERLVKIAVEVEYTPRGSDLSADVARAQARLERDLDKYRTFVLRRCDQESCRSN
Ga0311333_100347791	3300030114	Fen	MAVLKGSVEADVPAAFADQEWTEFVFRSLYGSYERGFEDVATSLAETDAESATVTFETEGERLVKIAVEVEYTPRGSDPSADVARAQARLERDLDKYRTFVLRRCDQESCRSN
Ga0311333_116083561	3300030114	Fen	MAVLKGSVEADVPVAFADQEWTEFVFRSLYGSYERGFEDVATSLAEMDADSGTVTFETEGERLVKVAVEVEYTPRGGDPSADIARAQARLERDLDKYRTFVLRRCDQESCRAN
Ga0302211_101664662	3300030491	Fen	MAVLKGAVEADVPVAFADQEWTEFVFRSLYGNYARGFEDVATSLAETDAESGTVTFETEGERLVKIAVEVEYTPRGGDPSADIARAQERLERDLDKYRTFVLRRCDQESCRAN
Ga0302211_102737721	3300030491	Fen	VDMAVLKGSVEADVPAAFADQEWTEFVFRSLYGSYERGFEDVATSLAETDAESATVTFETEGERLVKIAVEVEYTPRGSDLSADVARAQARLERDLDKYRTFVLRRCDQESCRSN
Ga0311335_100126387	3300030838	Fen	RSLYGSYERGFEDVATSLAETDAESGTVTFETEGERLVKIAVEVEYTPRGGDPSADIARAQERLERDLDKYRTFVLRRCDQESCRAN
Ga0311366_106094592	3300030943	Fen	MAVLKGSVEADVPPAFADQEWTEFVFRSLYGSYERGFEDVATSLAETDAESGSVTFEAEDESLVKIAVEVEYAPRGVDPAADVARAQARLERDLDKYRTFVLRRCDQESCRSN
Ga0302323_1012539502	3300031232	Fen	MAVLSGAVEADVPIQFADREWTEFMFRSLYGSYAKGFEDVAASLSETDADSGKVTFETEGDRLVKVSVELEYTPRRGADAATEVAAAQARLERDLEKYRVFLLRRCEQESCRTD
Ga0265316_103180212	3300031344	Rhizosphere	MATLSGSIEADVPLTFADLEWSEFMWRSLYGSFAKGFTDVADASVSAIDADSGTVTFETEGERLIKVSVEVKFTPRAGGDRAQEIARAQAQLEGDLEKYRTFLLKRCEQESCRVVSAA
Ga0265316_109674471	3300031344	Rhizosphere	MAILSGSVEADEPIQFADREWSEFVWRSLYGNFAKGFGEYSSSITETDADSGTVKFETEGERLVRVTVEVDYTPRSQSDPQAEVLLAQARLERDLAKYRDFLVHRCEQESCRPGTLSA
Ga0265316_110450121	3300031344	Rhizosphere	GSIEADVPIQFADREWSEFVWRSLYGNFAKGFGEYSSSITETDADSGTVKFETEGERLVKVTVEVDYTPRSKSDPQAEIRLAQARLERDLAKYRDFLVRRCEQESCRTDAQPV
Ga0311364_102748711	3300031521	Fen	MAVLKGSVVADVPVAFADQEWTEFVFRSLYGSYERGFEDVATSLAEMDADSGTVAFETEGERLVKVAVEVEYTPRGGDPSADIARAQARLERDLDKYRTFVLRRCDQESCRAN
Ga0311351_106120333	3300031722	Fen	MAVLKGSVEADVPIKFADKEWTEYMLRSLYGSYTTGSADVAASLSELDADSGTVTFRSEGDQQVRVSVELEYTPRGRADASEDVIKAQKELDR
Ga0302321_1006671252	3300031726	Fen	MAVLKGSVEADVPPAFADQEWTEFVFRSLYGSYERGFEDVATSLAETDAESGSVTFEAEGDSLVKIAVEVEYAPRGVDPAADVARAQARLERDLDKYRTFVLRRCDQESCRSN
Ga0302322_1010682371	3300031902	Fen	MAVLSGSIEADVPIKYADKEWSEFVWRSLYGSMARGFADDSAPITDTDADSGTVEFETEGDRLVKVSVELKYTPHGHGEPNDEIAKAQARLDADLEKYRKFLLWRCEQDNC
Ga0311367_111316261	3300031918	Fen	DQEWTEFMFRSLYGSYAKGFEDVAADLADVDADSGKVTFETEGDRLVKVSVEVEYTPRRGADAATEVAAAQARLERDLEKYRVFLLRRCEQESCRTD
Ga0315272_100018712	3300032018	Sediment	MAVLKSSVEADVPVAFANEEWTEFVYRSLYGNYQRGFEDVAVSLSDIDADSGTVTFETEPNGCVRIAVEAEYTPHGRDASADVARAQSSLQEDLAKYRVFLLRRCDQVSCRSN
Ga0315271_100323242	3300032256	Sediment	MTILRGSIEANVPLQFADREWSEFVFESLYGNYAKGFADSASLIDETDIDAGGVTFETEGDHLVRISVAVEYTPHSTVDAEKEIALAQANLERDLEKYRTFLLKRCEQESCR
Ga0335080_122498611	3300032828	Soil	MATLSGSIEADVPLAFADREWTEFVFRNLYGNYAKGFEDVAASINETDADSGTVRFETEGERLVRVSVDLEYTPRRGGDAKAEIAQAQARLERDLEKYRTFLL
Ga0335070_116572271	3300032829	Soil	MATLTGSVEADVPIQFADREWSEFVWRSLYGSFSRELSGDASSINETDADAGTVTFQTEGDRLVKVTVELEYTPHHGGDPAVEIARAQARLDRDL
Ga0335069_101189122	3300032893	Soil	MATLTGSVEADVPIQFADREWSEFVWRSLYGSFSRELSGDASSINETDADAGTVTFQTEGDRLVKVSVELEYTPHHGGDPAVEIARAQARLDRDLEKYRDFLLKRCEQESCRTA
Ga0335071_100346133	3300032897	Soil	MATLKGSIEADVPITFADREWSEFMWRSLYGSFAKGFADVADASPSAIDADSGTVTFETEGERLVKVSVEVKYTPHEAADSTAEVAHAQAQLDRDLEKYRIFLLRRCEQENCRTSPA
Ga0335071_118638961	3300032897	Soil	MATLSGSIEADVPLAFADREWTEFVFRNLYGNYAKGFEDVAASINETDADSGTVRFETEGERLVRVSVDLEYTPRRGGDAKAEIAQAQARLERDLEKYRTFLLRRCEQESCRAA
Ga0326728_101764612	3300033402	Peat Soil	MAILSGSIEADVPIAFADREWTEFVFRNLYGNYAKGFEDVAASINETDADSGTVQFETEGERLVKVSVELEYTPHGGDAKAEVARAQARLNADLEKYRTFLLKRCEQESCRPS
Ga0326727_101244794	3300033405	Peat Soil	MAVLSGSIQADVPIAFADREWTEFVFRNLYGNYAKGFADVATSINETDADSGTVQFETEGERPVKVSVELEYTPHGGGDAEAEVARAQARLSADLEKYRTFLLKRCEQESCRPS
Ga0326727_102311162	3300033405	Peat Soil	MAVLSGSIQADVPIAFADREWTEFVFRNLYGNYAKGFEDVAASINETDADSGTVQFETEGERLVKVSVELEYTPHGGDAKAEVARAQARLNADLEKYRTFLLKRCEQESCRPS
Ga0326727_102507784	3300033405	Peat Soil	MATLKGSIEADVPISFADREWSEFMWRSLYGSFAKGFSDVADASVSAIDADSGTVTFETEGERLVKVSVEVKYIPRPDADRTKDIARAQAQLERDLEKYRTFLLRRCGQESCR
Ga0326727_105321991	3300033405	Peat Soil	MAVLTGSVEADVPIRFADKEWSEFIWRSLYGSWVKGFDPASTITETDAEAGTVQFATEGDRLVKVTVNLDFTPPSGADPDQEVRRAQARLQRDLEKYRAFLLRRCDEQSCRAK
Ga0326727_106239581	3300033405	Peat Soil	MATLKGSIEADVPISFADREWSEFMWRSLYGSFAKGFSDVADASLSAIDADSGTVTFETEGERLVKVSVEVKYIPRPDADRAKDIARAQAQLERDLQKYRTFLLRRCEQESCRTD
Ga0371489_0005908_5380_5727	3300033755	Peat Soil	MATLKGSIEADVPISFADREWSEFMWRSLYGSFAKGFSDVADASLSAIDADSGTVTFETEGERLVKVSVEVKYIPRPDADRAKDIARAQAQLERDLQKYRTFLLRRCEQESCRTT
Ga0371489_0029568_2040_2387	3300033755	Peat Soil	MATLKGSIEADVPISFADREWSEFMWRSLYGSFAKGFSDVADASVSAIDADSGTVTFETEGERLVKVSVEVKYIPRPDADRTKDIARAQAQLERDLEKYRTFLLRRCGQESCRTN
Ga0334848_050524_3_368	3300033827	Soil	MGTLWESHRLATERGGAQPKGDIMAILSGSIEADVPIAFADREWTEFVFRNLYGNYAKGFADVAASINESDADSGTVKFETEGERLVKVSVELEYTARAGGDPGEEVSRAQARLDRDLERYR
Ga0371487_0189456_639_983	3300033982	Peat Soil	VATLSGSIEADVPIAFADREWTEFVFRNLYGNYAKGFEEVAASINETDADSGTVHFETEGDRLVKVSVALEYTPHSGGDAKTEIARAQARLNADLEKYRVFLLKRCEQESCRPN
Ga0371487_0306034_375_713	3300033982	Peat Soil	LKGSIEADVPISFADREWSEFMWRSLYGSFAKGFSDVADASVSAIDADSGTVTFETEGERLVKVSVEVKYIPRPDADRTKDIARAQAQLERDLEKYRTFLLRRCGQESCRTN
Ga0326724_0421551_455_700	3300034091	Peat Soil	KGFSDVADASLSAIDADSGTVTFETEGERLVKVSVEVKYIPRPDADRAKDIARAQAQLERDLQKYRTFLLRRCEQESCRTT
Ga0370493_0262233_288_587	3300034129	Untreated Peat Soil	MAVLKGSVEADVPVAFADQEWTEFVFRSLYGNYARGFEDVATSLAETDAESGTVTFETEGENLVKVAVEVEYAPRGIDPDADVARAQARLERDLDKYRTF
Ga0370501_0037835_1017_1373	3300034195	Untreated Peat Soil	MAILSGSIEADVPIQFADREWSEFVWRSLYGNFAKGFGEYSSSITETDADSGTVKFETEGERLVKVTVEVDYTPRSKSDPQAEIRLAQARLERDLAKYRDFLVRRCEQESCRTDAQPV
Ga0370501_0286100_2_277	3300034195	Untreated Peat Soil	EFVFRSLYGSYERGFEDVATSLAETDAESGTVTFETEGENLVKVAVEVEYAPRGIDPDADVARAQARLERDLDKYRTFVLRRCEQESCRSN
Ga0370501_0294446_101_445	3300034195	Untreated Peat Soil	MAVLSGSIEADVPIAFADREWTEFVFRSLYGNFAQGFSGEVSSINETDADSGTVRFETEGDRLVKVSVDVEYTPRAKGPADAEIAQAQARLDRDLKKYRAFLLKRCDQESCRPE
Ga0370501_0302267_2_295	3300034195	Untreated Peat Soil	KEWTEFVFRSLYGNYAKGFEDVAAAVSETDADSGTVTFETEADRLVKVSVEVEYTPRASGEAGAAEVTQAQARLEHDLEKYRVFLLRRCEQESCRPK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F051062

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences