Metagenome / Metatranscriptome Family F051250

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F051250
Family Type	Metagenome / Metatranscriptome
Number of Sequences	144
Average Sequence Length	85 residues
Representative Sequence	MTSPRFMWLVVAGRGHSSEQRGLTEDLDDAKANVNEHAERLRREGRTDWFGFVLDLDRPTVIAPPGSTPPMLGWERVYFIDGRD
Number of Associated Samples	119
Number of Associated Scaffolds	144

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	77.08 %
% of genes near scaffold ends (potentially truncated)	26.39 %
% of genes from short scaffolds (< 2000 bps)	77.08 %
Associated GOLD sequencing projects	109
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (65.278 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment (14.583 % of family members)
Environment Ontology (ENVO)	Unclassified (30.556 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Subsurface (non-saline) (31.944 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 25.00% β-sheet: 17.86% Coil/Unstructured: 57.14%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 144 Family Scaffolds
PF08281	Sigma70_r4_2	3.47
PF03795	YCII	2.78
PF00664	ABC_membrane	2.08
PF00005	ABC_tran	1.39
PF01833	TIG	1.39
PF07690	MFS_1	1.39
PF12229	PG_binding_4	0.69
PF00196	GerE	0.69
PF13183	Fer4_8	0.69
PF04542	Sigma70_r2	0.69
PF08003	Methyltransf_9	0.69
PF00392	GntR	0.69
PF13714	PEP_mutase	0.69
PF08029	HisG_C	0.69
PF00589	Phage_integrase	0.69
PF02656	DUF202	0.69
PF14219	DUF4328	0.69
PF06475	Glycolipid_bind	0.69
PF14329	DUF4386	0.69
PF00768	Peptidase_S11	0.69
PF02687	FtsX	0.69
PF00977	His_biosynth	0.69

COG ID	Name	Functional Category	% Frequency in 144 Family Scaffolds
COG2350	YciI superfamily enzyme, includes 5-CHQ dehydrochlorinase, contains active-site pHis	Secondary metabolites biosynthesis, transport and catabolism [Q]	2.78
COG0040	ATP phosphoribosyltransferase	Amino acid transport and metabolism [E]	0.69
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	0.69
COG1191	DNA-directed RNA polymerase specialized sigma subunit	Transcription [K]	0.69
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	0.69
COG1686	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	0.69
COG2149	Uncharacterized membrane protein YidH, DUF202 family	Function unknown [S]	0.69
COG3554	Uncharacterized conserved protein	Function unknown [S]	0.69
COG4941	Predicted RNA polymerase sigma factor, contains C-terminal TPR domain	Transcription [K]	0.69

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.28 %
All Organisms	root	All Organisms	34.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.28 %
cellular organisms	root	All Organisms → cellular organisms	33.33 %
Viruses	superkingdom	All Organisms → Viruses	1.39 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.28 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	33.33 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.39 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.28 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	27.78 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.39 %
unclassified Bacteria	no rank	All Organisms → cellular organisms → Bacteria → unclassified Bacteria	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.28 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	26.39 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.39 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.28 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	13.19 %
unclassified Actinobacteria	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria	8.33 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.39 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.28 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	9.03 %
Actinobacteria bacterium RBG_19FT_COMBO_70_19	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium RBG_19FT_COMBO_70_19	8.33 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	1.39 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.39 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.28 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	9.03 %
Actinobacteria bacterium RBG_19FT_COMBO_70_19	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium RBG_19FT_COMBO_70_19	8.33 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	1.39 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.39 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.28 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	9.03 %
Actinobacteria bacterium RBG_19FT_COMBO_70_19	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium RBG_19FT_COMBO_70_19	8.33 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	1.39 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.39 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.28 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	9.03 %
Actinobacteria bacterium RBG_19FT_COMBO_70_19	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium RBG_19FT_COMBO_70_19	8.33 %
unclassified Streptomyces	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces	1.39 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.39 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.28 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	9.03 %
Actinobacteria bacterium RBG_19FT_COMBO_70_19	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium RBG_19FT_COMBO_70_19	8.33 %
Streptomyces sp. NRRL S-813	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. NRRL S-813	1.39 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.39 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.69 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2088090015\|GPICI_9016803	Not Available	1201	Open in IMG/M
2088090015\|GPICI_9103526	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1477	Open in IMG/M
3300000754\|JGI11851J11668_1001717	Not Available	883	Open in IMG/M
3300000956\|JGI10216J12902_102426400	Not Available	860	Open in IMG/M
3300001431\|F14TB_100111927	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium RBG_19FT_COMBO_70_19	602	Open in IMG/M
3300001431\|F14TB_100111928	Not Available	1278	Open in IMG/M
3300004479\|Ga0062595_101476539	Not Available	625	Open in IMG/M
3300004643\|Ga0062591_102328024	Not Available	560	Open in IMG/M
3300005105\|Ga0066812_1001310	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium RBG_19FT_COMBO_70_19	1145	Open in IMG/M
3300005168\|Ga0066809_10170264	Not Available	575	Open in IMG/M
3300005169\|Ga0066810_10046373	Not Available	835	Open in IMG/M
3300005185\|Ga0066811_1002453	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1012	Open in IMG/M
3300005345\|Ga0070692_10160134	Not Available	1289	Open in IMG/M
3300005354\|Ga0070675_100156866	Not Available	1955	Open in IMG/M
3300005441\|Ga0070700_100435657	Not Available	994	Open in IMG/M
3300005444\|Ga0070694_100007101	All Organisms → cellular organisms → Bacteria	6820	Open in IMG/M
3300005577\|Ga0068857_100489090	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1154	Open in IMG/M
3300005844\|Ga0068862_100336007	Not Available	1398	Open in IMG/M
3300006049\|Ga0075417_10012466	All Organisms → cellular organisms → Bacteria	3201	Open in IMG/M
3300006196\|Ga0075422_10092210	Not Available	1153	Open in IMG/M
3300006572\|Ga0074051_11721103	Not Available	571	Open in IMG/M
3300006574\|Ga0074056_11263616	Not Available	535	Open in IMG/M
3300006576\|Ga0074047_10041132	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1582	Open in IMG/M
3300006576\|Ga0074047_11983443	Not Available	694	Open in IMG/M
3300006845\|Ga0075421_100770682	Not Available	1110	Open in IMG/M
3300006845\|Ga0075421_102036059	Not Available	611	Open in IMG/M
3300006846\|Ga0075430_100519167	Not Available	983	Open in IMG/M
3300006847\|Ga0075431_100314969	Not Available	1579	Open in IMG/M
3300006847\|Ga0075431_100848633	Not Available	885	Open in IMG/M
3300006847\|Ga0075431_101127496	Not Available	748	Open in IMG/M
3300006852\|Ga0075433_10204266	Not Available	1756	Open in IMG/M
3300006852\|Ga0075433_10471074	Not Available	1106	Open in IMG/M
3300006853\|Ga0075420_100470554	Not Available	1085	Open in IMG/M
3300006865\|Ga0073934_10699312	Not Available	584	Open in IMG/M
3300006871\|Ga0075434_100169606	Not Available	2202	Open in IMG/M
3300006904\|Ga0075424_101112550	Not Available	842	Open in IMG/M
3300009081\|Ga0105098_10284900	Not Available	789	Open in IMG/M
3300009094\|Ga0111539_10247138	Not Available	2077	Open in IMG/M
3300009157\|Ga0105092_10099665	Not Available	1593	Open in IMG/M
3300009157\|Ga0105092_10265929	Not Available	965	Open in IMG/M
3300009157\|Ga0105092_10306634	Not Available	896	Open in IMG/M
3300009157\|Ga0105092_10527049	Not Available	679	Open in IMG/M
3300009789\|Ga0126307_10002280	All Organisms → cellular organisms → Bacteria → Terrabacteria group	12911	Open in IMG/M
3300009801\|Ga0105056_1003823	Not Available	1463	Open in IMG/M
3300009809\|Ga0105089_1096652	Not Available	520	Open in IMG/M
3300009811\|Ga0105084_1032927	Not Available	889	Open in IMG/M
3300009815\|Ga0105070_1068184	Not Available	674	Open in IMG/M
3300009817\|Ga0105062_1134321	Not Available	509	Open in IMG/M
3300009818\|Ga0105072_1041989	Not Available	861	Open in IMG/M
3300009837\|Ga0105058_1052544	Not Available	913	Open in IMG/M
3300009840\|Ga0126313_11073490	Not Available	661	Open in IMG/M
3300010029\|Ga0105074_1010141	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1478	Open in IMG/M
3300010036\|Ga0126305_10055568	Not Available	2259	Open in IMG/M
3300010037\|Ga0126304_10000898	All Organisms → cellular organisms → Bacteria	13163	Open in IMG/M
3300010038\|Ga0126315_10111401	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. NRRL S-813	1582	Open in IMG/M
3300010038\|Ga0126315_10141273	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. NRRL S-813	1419	Open in IMG/M
3300010040\|Ga0126308_10027118	Not Available	3159	Open in IMG/M
3300010041\|Ga0126312_10019505	Not Available	4528	Open in IMG/M
3300010166\|Ga0126306_10062749	Not Available	2604	Open in IMG/M
3300010166\|Ga0126306_10200077	Not Available	1508	Open in IMG/M
3300010375\|Ga0105239_13017506	Not Available	549	Open in IMG/M
3300012021\|Ga0120192_10019612	All Organisms → Viruses → Predicted Viral	1055	Open in IMG/M
3300012204\|Ga0137374_10802488	Not Available	698	Open in IMG/M
3300012353\|Ga0137367_10063300	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium RBG_19FT_COMBO_70_19	2759	Open in IMG/M
3300012358\|Ga0137368_10434472	Not Available	856	Open in IMG/M
3300012532\|Ga0137373_10035575	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4782	Open in IMG/M
3300012941\|Ga0162652_100032388	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	790	Open in IMG/M
3300014487\|Ga0182000_10235896	Not Available	724	Open in IMG/M
3300014745\|Ga0157377_10129410	All Organisms → cellular organisms → Bacteria	1540	Open in IMG/M
3300014965\|Ga0120193_10009455	Not Available	901	Open in IMG/M
3300015374\|Ga0132255_100968415	Not Available	1275	Open in IMG/M
3300018028\|Ga0184608_10003813	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	4714	Open in IMG/M
3300018028\|Ga0184608_10048385	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium RBG_19FT_COMBO_70_19	1667	Open in IMG/M
3300018028\|Ga0184608_10062727	Not Available	1491	Open in IMG/M
3300018028\|Ga0184608_10267195	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	753	Open in IMG/M
3300018031\|Ga0184634_10010198	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3324	Open in IMG/M
3300018031\|Ga0184634_10198203	Not Available	914	Open in IMG/M
3300018051\|Ga0184620_10015014	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium RBG_19FT_COMBO_70_19	1834	Open in IMG/M
3300018053\|Ga0184626_10009534	Not Available	3782	Open in IMG/M
3300018054\|Ga0184621_10004897	All Organisms → cellular organisms → Bacteria	3647	Open in IMG/M
3300018067\|Ga0184611_1048527	Not Available	1410	Open in IMG/M
3300018067\|Ga0184611_1137028	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	864	Open in IMG/M
3300018071\|Ga0184618_10078563	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium RBG_19FT_COMBO_70_19	1258	Open in IMG/M
3300018072\|Ga0184635_10002036	All Organisms → cellular organisms → Bacteria	6051	Open in IMG/M
3300018072\|Ga0184635_10003553	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4875	Open in IMG/M
3300018075\|Ga0184632_10085443	All Organisms → Viruses → Predicted Viral	1379	Open in IMG/M
3300018075\|Ga0184632_10119014	Not Available	1162	Open in IMG/M
3300018077\|Ga0184633_10519232	Not Available	575	Open in IMG/M
3300018078\|Ga0184612_10026210	Not Available	3005	Open in IMG/M
3300018081\|Ga0184625_10008743	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4626	Open in IMG/M
3300018081\|Ga0184625_10534437	Not Available	586	Open in IMG/M
3300018082\|Ga0184639_10386682	Not Available	724	Open in IMG/M
3300018465\|Ga0190269_10548535	Not Available	766	Open in IMG/M
3300018469\|Ga0190270_11288196	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium RBG_19FT_COMBO_70_19	773	Open in IMG/M
3300018476\|Ga0190274_10006990	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	6873	Open in IMG/M
3300018481\|Ga0190271_13134656	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium RBG_19FT_COMBO_70_19	554	Open in IMG/M
3300019233\|Ga0184645_1192385	Not Available	507	Open in IMG/M
3300019767\|Ga0190267_10710851	Not Available	649	Open in IMG/M
3300019884\|Ga0193741_1074020	Not Available	875	Open in IMG/M
3300020003\|Ga0193739_1011657	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2308	Open in IMG/M
3300020005\|Ga0193697_1100543	Not Available	690	Open in IMG/M
3300020020\|Ga0193738_1016458	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2357	Open in IMG/M
3300021080\|Ga0210382_10115384	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium RBG_19FT_COMBO_70_19	1130	Open in IMG/M
3300021082\|Ga0210380_10206186	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium RBG_19FT_COMBO_70_19	889	Open in IMG/M
3300021510\|Ga0222621_1019652	Not Available	1350	Open in IMG/M
3300022195\|Ga0222625_1345192	Not Available	792	Open in IMG/M
3300022534\|Ga0224452_1009443	Not Available	2511	Open in IMG/M
3300025885\|Ga0207653_10001514	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	7521	Open in IMG/M
3300025925\|Ga0207650_10345336	Not Available	1223	Open in IMG/M
3300025926\|Ga0207659_10212785	Not Available	1550	Open in IMG/M
3300025932\|Ga0207690_10502947	Not Available	980	Open in IMG/M
3300025972\|Ga0207668_10892052	Not Available	791	Open in IMG/M
3300026116\|Ga0207674_10202830	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1933	Open in IMG/M
3300026878\|Ga0208891_1001046	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium RBG_19FT_COMBO_70_19	889	Open in IMG/M
3300026900\|Ga0207444_1000694	Not Available	2368	Open in IMG/M
3300026944\|Ga0207570_1013168	Not Available	620	Open in IMG/M
3300027163\|Ga0209878_1003484	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2285	Open in IMG/M
3300027379\|Ga0209842_1011758	All Organisms → cellular organisms → Bacteria	1730	Open in IMG/M
3300027379\|Ga0209842_1071132	Not Available	611	Open in IMG/M
3300027451\|Ga0207599_101472	Not Available	693	Open in IMG/M
3300027490\|Ga0209899_1106841	Not Available	530	Open in IMG/M
3300027523\|Ga0208890_1000321	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4506	Open in IMG/M
3300027523\|Ga0208890_1013661	Not Available	1108	Open in IMG/M
3300027577\|Ga0209874_1017321	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2073	Open in IMG/M
3300027577\|Ga0209874_1024709	Not Available	1679	Open in IMG/M
3300027722\|Ga0209819_10036055	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1679	Open in IMG/M
3300027722\|Ga0209819_10065952	Not Available	1250	Open in IMG/M
3300027873\|Ga0209814_10031596	Not Available	2180	Open in IMG/M
3300027909\|Ga0209382_11540755	Not Available	660	Open in IMG/M
3300027949\|Ga0209860_1009263	Not Available	1341	Open in IMG/M
3300028722\|Ga0307319_10111687	Not Available	878	Open in IMG/M
3300028755\|Ga0307316_10290488	Not Available	597	Open in IMG/M
3300028771\|Ga0307320_10012040	All Organisms → cellular organisms → Bacteria → Terrabacteria group	3096	Open in IMG/M
3300028791\|Ga0307290_10025635	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2075	Open in IMG/M
3300028791\|Ga0307290_10169743	Not Available	799	Open in IMG/M
3300028814\|Ga0307302_10465850	Not Available	626	Open in IMG/M
3300028828\|Ga0307312_10713642	Not Available	664	Open in IMG/M
3300028875\|Ga0307289_10490897	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium RBG_19FT_COMBO_70_19	504	Open in IMG/M
3300030606\|Ga0299906_10053544	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3219	Open in IMG/M
3300030620\|Ga0302046_11200539	Not Available	596	Open in IMG/M
3300031740\|Ga0307468_100082038	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1842	Open in IMG/M
3300032180\|Ga0307471_100295474	Not Available	1704	Open in IMG/M
3300033417\|Ga0214471_11338279	Not Available	541	Open in IMG/M
3300034354\|Ga0364943_0396866	Not Available	533	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	81.25%
Host-Associated	Host-Associated	18.75%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	56.94%
Aquatic	Environmental → Aquatic	24.31%
Plants	Host-Associated → Plants	18.75%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	55.56%
Sediment	Environmental → Aquatic → Sediment	15.97%
Rhizosphere	Host-Associated → Plants → Rhizosphere	15.97%
Freshwater	Environmental → Aquatic → Freshwater	7.64%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.78%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.69%
Floodplain	Environmental → Terrestrial → Floodplain	0.69%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	0.69%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	40.28%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	15.97%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	12.50%
Sand	Environmental → Terrestrial → Soil → Sand	10.42%
Sediment	Environmental → Aquatic → Freshwater → Sediment	7.64%
Loam	Environmental → Terrestrial → Soil → Loam	4.86%
Soil	Host-Associated → Plants → Rhizosphere → Soil	3.47%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.08%
Sediment	Environmental → Aquatic → Thermal Springs → Sediment	0.69%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.69%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	0.69%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.69%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	32.64%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	15.97%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	12.50%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	10.42%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	7.64%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.47%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	3.47%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.78%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.08%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	2.08%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.08%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	1.39%
Unclassified	Environmental → Aquatic → Thermal Springs → Sediment → Unclassified	0.69%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	0.69%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.69%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	0.69%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.69%

Habitat	Taxonomy	Distribution
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	14.58%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	13.19%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	11.11%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	10.42%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	8.33%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	6.94%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	4.86%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	3.47%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	2.78%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	2.78%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.78%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.08%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	2.08%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.39%
Terrestrial	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial	1.39%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.39%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.39%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.39%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.39%
Hot Spring Sediment	Environmental → Aquatic → Thermal Springs → Sediment → Unclassified → Hot Spring Sediment	0.69%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	0.69%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.69%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	0.69%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.69%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.69%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.69%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.69%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.69%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2088090015	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000754	Amended soil microbial communities from Kansas Great Prairies, USA - acetate Total DNA F2.4TB	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001431	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.4TB clc assemly	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005105	Soil and rhizosphere microbial communities from Laval, Canada - mgHPC	Environmental	Open in IMG/M
3300005168	Soil and rhizosphere microbial communities from Laval, Canada - mgLPC	Environmental	Open in IMG/M
3300005169	Soil and rhizosphere microbial communities from Laval, Canada - mgHPA	Environmental	Open in IMG/M
3300005185	Soil and rhizosphere microbial communities from Laval, Canada - mgHPB	Environmental	Open in IMG/M
3300005345	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG	Environmental	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006196	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1	Host-Associated	Open in IMG/M
3300006572	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHPB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006574	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHAA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006576	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006853	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4	Host-Associated	Open in IMG/M
3300006865	Hot spring sediment bacterial and archeal communities from British Columbia, Canada, to study Microbial Dark Matter (Phase II) - Larsen N4 metaG	Environmental	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300009081	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm May2015	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009157	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015	Environmental	Open in IMG/M
3300009789	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28	Environmental	Open in IMG/M
3300009801	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S2_20_30	Environmental	Open in IMG/M
3300009809	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S2_30_40	Environmental	Open in IMG/M
3300009811	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_20_30	Environmental	Open in IMG/M
3300009815	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_0_10	Environmental	Open in IMG/M
3300009817	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_10_20	Environmental	Open in IMG/M
3300009818	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_30_40	Environmental	Open in IMG/M
3300009837	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_20_30	Environmental	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010029	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_10_20	Environmental	Open in IMG/M
3300010036	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26	Environmental	Open in IMG/M
3300010037	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot25	Environmental	Open in IMG/M
3300010038	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106	Environmental	Open in IMG/M
3300010040	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55	Environmental	Open in IMG/M
3300010041	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104A	Environmental	Open in IMG/M
3300010166	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300012021	Terrestrial microbial communites from a soil warming plot in Okalahoma, USA - T1	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012358	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_100_16 metaG	Environmental	Open in IMG/M
3300012532	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaG	Environmental	Open in IMG/M
3300012941	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t4i015	Environmental	Open in IMG/M
3300014487	Bulk soil microbial communities from Mexico - Magueyal (Ma) metaG	Environmental	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300014965	Terrestrial microbial communites from a soil warming plot in Okalahoma, USA - T2	Environmental	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018031	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b1	Environmental	Open in IMG/M
3300018051	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_b1	Environmental	Open in IMG/M
3300018053	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_b1	Environmental	Open in IMG/M
3300018054	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1	Environmental	Open in IMG/M
3300018067	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_coex	Environmental	Open in IMG/M
3300018071	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1	Environmental	Open in IMG/M
3300018072	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b2	Environmental	Open in IMG/M
3300018075	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b1	Environmental	Open in IMG/M
3300018077	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b1	Environmental	Open in IMG/M
3300018078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_coex	Environmental	Open in IMG/M
3300018081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1	Environmental	Open in IMG/M
3300018082	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b2	Environmental	Open in IMG/M
3300018465	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 IS	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental	Open in IMG/M
3300019233	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019767	Populus adjacent soil microbial communities from riparian zone of Oak Creek, Arizona, USA - 239 T	Environmental	Open in IMG/M
3300019884	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2s2	Environmental	Open in IMG/M
3300020003	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2a2	Environmental	Open in IMG/M
3300020005	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3m2	Environmental	Open in IMG/M
3300020020	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2a1	Environmental	Open in IMG/M
3300021080	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redo	Environmental	Open in IMG/M
3300021082	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_coex redo	Environmental	Open in IMG/M
3300021510	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_coex	Environmental	Open in IMG/M
3300022195	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022534	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_b1	Environmental	Open in IMG/M
3300025885	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025925	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025932	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026116	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026878	Soil and rhizosphere microbial communities from Laval, Canada - mgHPC (SPAdes)	Environmental	Open in IMG/M
3300026900	Soil microbial communities from Kellog Biological Station, Michigan, USA - Nitrogen cycling UWRJ-G01K4-12 (SPAdes)	Environmental	Open in IMG/M
3300026944	Soil microbial communities from Kellog Biological Station, Michigan, USA - Nitrogen cycling UWRJ-G01K2-12 (SPAdes)	Environmental	Open in IMG/M
3300027163	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_40_50 (SPAdes)	Environmental	Open in IMG/M
3300027379	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_10_20 (SPAdes)	Environmental	Open in IMG/M
3300027451	Soil microbial communities from Kellog Biological Station, Michigan, USA - Nitrogen cycling UWRJ-G09K3-12 (SPAdes)	Environmental	Open in IMG/M
3300027490	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_0_10 (SPAdes)	Environmental	Open in IMG/M
3300027523	Soil and rhizosphere microbial communities from Laval, Canada - mgHPA (SPAdes)	Environmental	Open in IMG/M
3300027577	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_20_30 (SPAdes)	Environmental	Open in IMG/M
3300027722	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015 (SPAdes)	Environmental	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300027949	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S2_40_50 (SPAdes)	Environmental	Open in IMG/M
3300028722	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_368	Environmental	Open in IMG/M
3300028755	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_356	Environmental	Open in IMG/M
3300028771	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_369	Environmental	Open in IMG/M
3300028791	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_144	Environmental	Open in IMG/M
3300028814	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300028875	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_143	Environmental	Open in IMG/M
3300030606	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT145D125	Environmental	Open in IMG/M
3300030620	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT147D111	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300033417	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT142D155	Environmental	Open in IMG/M
3300034354	Sediment microbial communities from East River floodplain, Colorado, United States - 23_s17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GPICI_00915660	2088090015	Soil	MWLVVAGRGHSSEQRGLTEDLDDAKANVNEHAERLRREGRTDWFGFVLDLDRPTVIAPAGSTQPMLGWERAYFVDGRDRARSSPSS
GPICI_01970080	2088090015	Soil	MTSPRFMWLVVAGRGHSSEQRGLTEDLDDAKANVNEHAERLRREGRTDWFGFVLDLDRPTVIAPAGSTQPMLGWERAYFVDGRDRARSSPSS
JGI11851J11668_10017173	3300000754	Soil	MTSARFLWVVVAGRGHSSEPRGLTEDLGDAKAKVNGYTERLRRKGRTDWFGVVLDLDQPTVIASPGSTQPILGWERVYFVDGRD*
JGI10216J12902_1024264003	3300000956	Soil	MTAPKFMWAVVAGRGHSSDQLGRSFTEDLDDAKAKVNEYAERLRREGRTDWFGLVLDLDRPTIIAPPGSTQPMLGWERVYFVDGRD*
F14TB_1001119272	3300001431	Soil	MTSARFLWVVVEGRGHSSEPRGLTEDLGDAKAKVNGYTERLRRKGRTDWFGVVLDLDQPTVIASPGSTQPILGWERVYFVDGRD*
F14TB_1001119283	3300001431	Soil	MTSARFLWVVVAGRGHSSEPRGLTEDLGDAKAKVNGYTERLRRKGRTDWFGVVLDLDQPTVIAPPGSTQPILGWERVYFVDGRD*
Ga0062595_1014765392	3300004479	Soil	MTSARFLWVVVAGSGHSSEPRGLTEDLGDAMAKVNGYTERLRRKGRTDWFGVVLDLDQPTVIAPPGSTQPILGWERVYFVDGRD*
Ga0062591_1023280241	3300004643	Soil	MTSARFLWVVVAGSGHSSEPRGLTEDLGDAMAKVNGYTERLRRKGRTDWFGVVLDLDQPTVIAPPGSTQPILGWERVYFVDGRE*
Ga0066812_10013102	3300005105	Soil	MTSSRFMWLVVAGRGHSSEQRGFTENLDDSKAKVNEHAERLRREGRTDWFGFVLDLDRPTVIASPTPGTPPILGWERVYFADGRK*
Ga0066809_101702641	3300005168	Soil	MWLVVAGRGHSSEQRGFTEDLDHARARVNEHAERLRRKSRTDWFGFVLDLDRPTVIAPPGSTQPILGWERVHFVDGRD*
Ga0066810_100463731	3300005169	Soil	MTSARFMWLVVAGRGHSSEQRGFTEDLDHAMARVNEHAERLRRKSRTDWFGFVLDLDRPTVIAPPGSTQPILGWERVHFVDGRD*
Ga0066811_10024532	3300005185	Soil	MWLVVAGRGHSSEQRGFTENLDDSKAKVNEHAERLRREGRTDWFGFVLDLDRPTVIASPTPGTPPILGWERVYFADGRK*
Ga0070692_101601341	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	VVAGRGHSSEQRGFTEALYDAKAKVNEHAERLGRKGRTDWFGFVLDLDRPTVIAPPGSTQPILGWERVYFVDGRG*
Ga0070675_1001568665	3300005354	Miscanthus Rhizosphere	MWLVVAGRGHSSEQRGFTEALYDAKAKVNEHAERLGRKGRTDWFGFVLDLDRPTVIAPPGSTQPILGWERVYFVDGRG*
Ga0070700_1004356573	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	MTSSRFMWLVVAGRGHSSEQRGFTEALYDAKARVNEHAERLGRKGRTDWFGFVLDLDRPTVIAPPGSTQPILGWERVYFVDGRG*
Ga0070694_1000071018	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	MTSSRFMWLVVAGRGHSSEQRGFTEALYDAKAKVNEHAERLGRKGRTDWFGFVLDLDRPTVIAPPGSTQPILGWERVYFVDGRG*
Ga0068857_1004890903	3300005577	Corn Rhizosphere	MTSPRFMWLVVAGRGHSSEQRGLTEDLDDAKANVNEHAERLRREGRTDWFGFVLDLDRPTVIAPAGGTQPMLGWERVYFVAGRDRARSSPSS*
Ga0068862_1003360074	3300005844	Switchgrass Rhizosphere	LTMTSARFLWVVVAGSGHSSEPRGLTEDLGDAMAKVNGYTERLRRKGRTDWFGVVLDLDQPTVIAPPGSTQPILGWERVYFVDGRD*
Ga0075417_100124664	3300006049	Populus Rhizosphere	MTSSRFMWLVVAGRGHSSEQRGFTEDQDDAKAKVTEHAERLRRKGRTDWFGFVLDLDRPTVIGPPGSTPPMLGWERVYFVDGRY*
Ga0075422_100922101	3300006196	Populus Rhizosphere	AGRGHSSEQRGFTEDQDDAKAKVTEHAERLRRKGRTDWFGFVLDLDRPTVIGPPGSTPPMLGWERVYFVDGRY*
Ga0074051_117211031	3300006572	Soil	MTSARFMWLVVAGRGHSSEQRGFTEDLDHARARVNEHAERLRRKSRTDWFGFVLDLDRPTVIAPPGSTQPILGWERVHFVDGRD*
Ga0074056_112636161	3300006574	Soil	ARRDAARGRPLGSRPTMTSSRFMWLVVAGRGHSSEQRGFTENLDDSKAKVNEHAERLRREGRTDWFGFVLDLDRPTVIASPTPGTPPILGWERVYFADGRK*
Ga0074047_100411323	3300006576	Soil	MTASRFMWLVVAGRGHSSEQRSCTEDLEDAKAKVNEHAERLRREGRTDWFGFVLDLDRPTVIASPTPGTPPILGWERVYF
Ga0074047_119834431	3300006576	Soil	MMSSRFMWLVVAGRGHSSEQRGFTEDLDDAKAKVNRHAERLRREGRTDWFGFVLDLDRPTVIAPSGSTQPMLGWERVYFVDGRG*
Ga0075421_1007706822	3300006845	Populus Rhizosphere	MTSSRFLWLVVAGRGHSSEQRGLTEDLGDAKANVNEYGERLRRKGRTDWFGFVLDLDRPTVIAPTGSTQPILGWERVYFVDGRD*
Ga0075421_1020360592	3300006845	Populus Rhizosphere	MASPRFMWLVVAGRGHSSEQRGLTEDLDDAKANVNEHAERLRREGRTDWFGFVLDLDRPTVIAPAGSTQPMLGWERVYFVAGRDRHASRYQSSG*
Ga0075430_1005191671	3300006846	Populus Rhizosphere	WLVVAGRGHSSEQRGLTEDLGDAKANVNEYGERLRRKGRTDWFGFVLDLDRPTVIAPTGSTQPILGWERVYFVDGRD*
Ga0075431_1003149692	3300006847	Populus Rhizosphere	MTSSRFMWLVAAGRGHSSEQRGFTEDQDDAKAKVTEHAERLRRKGRTDWFGFILDLDRPTVIGPPGSTPPMLGWERVYFVDGRY*
Ga0075431_1008486331	3300006847	Populus Rhizosphere	MTASRFMWIVVAGRGHSSEQRGFSEDLADAEAKVNEHAGRLRREGRTDWFGVVLDLDRPTVISPPGGTPPMLGWERVYFVDGR
Ga0075431_1011274962	3300006847	Populus Rhizosphere	MTMTSSRFLWLVVAGRGHSSEQRGLTEDLGDAKANVNEYGERLRRKGRTDWFGFVLDLDRPTVIAPSGSTQPILGWERVYFVDGRD*
Ga0075433_102042662	3300006852	Populus Rhizosphere	MTSSRFMWLVVAGRGHSSEQRGFTEALYDAKAKVNEHAERLGRKGRTDWFGFVLDLDRPTVIGPPGSTPPMLGWERVYFVDGRY*
Ga0075433_104710744	3300006852	Populus Rhizosphere	MTSSRFMWLVVAGRGHSSEQRGFTEDQDDAKAKVTEHAERLRRKGRTDWFGFVLDLDRPTVIGPPGSTPPMLGWE
Ga0075420_1004705542	3300006853	Populus Rhizosphere	MTSSRFLWLVVAGRGHSSEQRGLTEDLGDAKANVNEYGERLRRKGRTDWFGFVLDLDRPTVIAPSGSTQPILGWERVYFVDGRD*
Ga0073934_106993121	3300006865	Hot Spring Sediment	RPTMTSSRFMWLVVAGRGHSSEQRGFTEDLDDAKANVNEHAERLRREGRTDWFGIVLALDQPTVISPHGSTPPMLGWERVYFVDGRD*
Ga0075434_1001696063	3300006871	Populus Rhizosphere	MTSSRFMWLVVAGRGHSSEQRGFTEDQDDAKAKVTEHAERLRRKGRTDWFGFILDLDRPTVIGPPGSTPPMLGWERVYFVDGRY*
Ga0075424_1011125502	3300006904	Populus Rhizosphere	MTSSRFMWLVVAGRGHSSEQRGFTEDQDDAKAKVTEHAERLRRKGRTDWFGFVLDLDRPTVIGPPGSTPPMLGCERVYFVDGRY*
Ga0105098_102849001	3300009081	Freshwater Sediment	IVVAGRGHSSEQRGFSEDLDDAEANVNEHAGQLRREGRTDWFGVVLDLDRPTVISPPGNTPPMLGWERVYFVDGRN*
Ga0111539_102471383	3300009094	Populus Rhizosphere	MWLVVAGRGHSSEQRGFTEDQDDAKAKVTEHAERLRRKGRTDWFGFVLDLDRPTVIGPPGSTPPMLGWERVYFVDGRY*
Ga0105092_100996652	3300009157	Freshwater Sediment	MTAYRFIWIVVAGRGHSSEQRGFSEDLDDAEANVNEHAGRLRREGRTDWFGVVLDLDQPTVISPPGNTPPMLGWERVYFVDGRN*
Ga0105092_102659292	3300009157	Freshwater Sediment	MWLVVAGRGHSSEQRGFTEDLDDAKANVNQYAERLRREGRTDWFGVVLDLDRPTVISPPGSTPPMLGWERVYFVDGRD*
Ga0105092_103066342	3300009157	Freshwater Sediment	MTASRFMWIVVAGRGHSSEQRGFTEDLDDAEAKVNEHAGRLRREGRTDWFGVVLDLDRPTVISPPGGTPPMLGWERVYFVDGRD*
Ga0105092_105270491	3300009157	Freshwater Sediment	AGRGHSSEQRGFTEDLDHARATVNEHAERLRRKSGTDWFGFVLDLDRPTVIAPPGSTPPMLGWERVYFVDGRH*
Ga0126307_1000228017	3300009789	Serpentine Soil	MTSSRFMWLVVAGRGHSSEQRGLTEDLDGAKANVNEHAERLRREGRTDWFGFVLDLDRPTVIAPPGSSQPMLGWERVFFVDGRD*
Ga0105056_10038232	3300009801	Groundwater Sand	MTSFRFMWLVVAGRGHSSEQRGLTEDLDDAKANVNEHAERLRREGRTDWFGFVLDLDRPTVIAPAGSTQPMLGWERVYFVAGRDRARSSPSS*
Ga0105089_10966521	3300009809	Groundwater Sand	MTSPRFMWLVVAGRGHSSEQRGLTEDLDDAKANVNEHAERLRREGRTDWFGFVLDLDRPTVIAPAGSTQPMLGWERVYFVAGRDRARSSPSS*
Ga0105084_10329271	3300009811	Groundwater Sand	MTSARFMWLVVAGRGHSSEQRGFTEDLDHARARVNEHAERLRRKSRTDWFGFVLDLNRPTVIAPPGSTQPILGWERVHFVDGRD*
Ga0105070_10681841	3300009815	Groundwater Sand	VVAGRGHSSEQRSFTEDLEDAKAKVHEHAERLRREGRTDWFGFVLDLDRPTVIAPSTPGTPPILGWERVYFVDGRN*
Ga0105062_11343211	3300009817	Groundwater Sand	MTSPRFMWLVVAGRGHSREQRGLTEDLDDAKANVNEHAERLRREGRTDWFGFVLDLDRPTVIAPAGSTQPMLGWERVYFVAGRDRARSSPSS*
Ga0105072_10419892	3300009818	Groundwater Sand	MWLVVAGRGHSSEQRGLTEDLDDAKANVNEHAERLRREGRTDWFGFVLDLDRPTVIAPAGSTQPMLGWERVYFVAGRDRARSSPSS*
Ga0105058_10525443	3300009837	Groundwater Sand	VVAGRGHSSEQRSFTEDLEDAKAKVHEHAERLRREGRTDWFGFVLDLDRPTVIAPSTPGTPPILGWERMYFV
Ga0126313_110734901	3300009840	Serpentine Soil	MTSSRFMWLVVAGRGHSSEQRGFTEDLDGAKAKVNEHAERLRREGRTDWFGFVLDLDRPTVIAPPGSTQPVLGWERVFFLDGRD*
Ga0105074_10101412	3300010029	Groundwater Sand	MTSSRFLWLVVAGRGHSSEQRGLTEDLGDAKANVNGYAERLRREGRTDWFGFVLDLDRPILIAPPGSTQPILGWERVYFVDGRD*
Ga0126305_100555684	3300010036	Serpentine Soil	MTSSRFMWLVVAGRGHSSEQRGLTEDLDGAKAKVNEHAERLRREGRTDWFGFVLDLDRPTVIAPPGSSQPMLGWERVFFVDGRD*
Ga0126304_1000089812	3300010037	Serpentine Soil	MWLVVAGRGHSSEQRGLTEDLDGAKANVNEHAERLRREGRTDWFGFVLDLDRPTVIAPPGSSQPMLGWERVFFVDGRD*
Ga0126315_101114012	3300010038	Serpentine Soil	MWLVVAGRGHSSEQRGLTEDLDGAKANVNEHAERLRREGRTDWFGFVLDLDRPTVIAPPGSTQPMLGWERVFFVDGRD*
Ga0126315_101412732	3300010038	Serpentine Soil	MWLVVAGRGHSSEQRGLTEDLDGAKAKVNEHAERLRREGRTDWFGFVLDLDRPTVIAPPGSTQPVLGWERVFFLDGRD*
Ga0126308_100271183	3300010040	Serpentine Soil	MMTSSRFMWLVVAGRGHSSEQRGLTEDLDGAKANVNEHAERLRREGRTDWFGFVLDLDRPTVIAPPGSSQPMLGWERVFFVDGRD*
Ga0126312_100195054	3300010041	Serpentine Soil	MWLVVAGRGHSSEQRGFTEDLDGAKAKVNEHAERLRREGRTDWFGFVLDLDRPTVIAPPGGTQPVLGWERVFFLDGRD*
Ga0126306_100627493	3300010166	Serpentine Soil	MWLVVAGRGHSSEQRGFTEDLDGAKAKVNEHAERLRREGRTDWFGFVLDLDRPTVIAPPGSTQPMLGWERVFFVDGRD*
Ga0126306_102000771	3300010166	Serpentine Soil	MTSSRFMWLVVAGRGHSSEQRGLTEDPDGAKANVNEHAERLRREGRTDWFGFVLDLDRPTVIAPPGSSQPMLGWERVFFVDGRD*
Ga0105239_130175061	3300010375	Corn Rhizosphere	MTSSRFMWLVVAGRGHSSEQRGFTEALYDAKAKVNEHAERLGRKGRTDWFGFVLDLDRPTVIAPAGSTQPMLGWERVYFVAGRG*
Ga0120192_100196122	3300012021	Terrestrial	MWLVVAGRGHSSEQRGFTEDLDDAKANVNEHAERLRREGRTDWFGFVLDLDRPTVIAPPGSTQPVLGWERVFFVDGRD*
Ga0137374_108024882	3300012204	Vadose Zone Soil	MTASNFMWEVVAGRGHSSEQLGRSFTEDLDAKAKVNEHAERLRGEGRTDWFGAVSDLNRPTVIAPPGSTHPMLGWERVYFV
Ga0137367_100633001	3300012353	Vadose Zone Soil	MWLVVAGRGHSSEQRGFTEDLDHAKAKVNEHAERLRRKGRTDWFGFVLDLDRPTVIAPPGSTPPMLGWERVYFIDGRD*
Ga0137368_104344721	3300012358	Vadose Zone Soil	MTASNFMWEVVAGRGHSSEQLGRSFTEDLDDAKAKVNEHAERLRGEGRTDWFGAVSDLNRPTVIAPPGSTHPMLGWERVYFVLR
Ga0137373_100355753	3300012532	Vadose Zone Soil	MWLVVAGRGHSSEQRGFTEDLDAAKANVNKHAERLRREGRTDWFGFVLDLDRPTVIAPPGSTQPMLGWERVYFVDGRG*
Ga0162652_1000323882	3300012941	Soil	MWLVVAGRGHSSEQRGLTEDLDDAKSNVNEHAERLRREGRTDWFGFVLDLDRPTVIAPPGSTQPMLGWERVYFVAGRDRARSSPSS*
Ga0182000_102358961	3300014487	Soil	MWLVVAGRGHSSEQRGLTEELDDAKANVNEHAERLRREGRTDWFGFVLDLDRPTVITPAGSTPLMLGWERVYFVAGRDRARSSPSS*
Ga0157377_101294102	3300014745	Miscanthus Rhizosphere	MWLVVAGRGHSSEQRGLTEDLDDAKANVNEHAERLRREGRTDWFGFVLDLDWPTVIAPPGSTQPMLGWERVYFVAGRDRARSSPSS*
Ga0120193_100094552	3300014965	Terrestrial	MWLVVAGRGHSSEQRGFTEDLDGAKAKVNEHAERLRREGRTDWFGFVLDLDRPTVIAPPGSTQPVLGWERVFFVDGRD*
Ga0132255_1009684151	3300015374	Arabidopsis Rhizosphere	MTSARFLWVVVAGSGHSSEPRGLTEDLGDAMAKVNGYTERLRRKGRTDVFGVVLDLDQPTVIAPPGSTQPILGWERVYFVDGRD*
Ga0184608_100038137	3300018028	Groundwater Sediment	MTSFRFMWLVVAGRGHSSEQRGFTEDLDEAKANVNEHAERLRRKGRTDWFGFVLDLDRPTVIAPPGSTPPMLGWERVYFIDGRD
Ga0184608_100483851	3300018028	Groundwater Sediment	MTSPRFMWLVVAGRGHSSEQRGLTEDLDDAKANVNEHAERLRREGRTDWFGFVLDLDRPTVIAPPGSTQPMLGWERVYFVAGRDRARSSPSS
Ga0184608_100627272	3300018028	Groundwater Sediment	MWLVVAGRGHSSEQRGFTEDLDHARARVNEHAERLRRKSRTDWFGFVLDLDRPTVIAPPGSTQPILGWERVHFVDGRD
Ga0184608_102671951	3300018028	Groundwater Sediment	MTSPRFMWLVVACRGHASEQRGLTEDLDDAKANVNEHAERLRREGRTDWFGFVLDLDRPTVIAPAGSTQPMLGWERVYFVAGRD
Ga0184634_100101981	3300018031	Groundwater Sediment	MTSFRFMWLVVAGRGHSSEQRGFTEDLDEAKANVNEHAERLRRKGRTDWFGFVLDLDRPTVIAPPGSTQPILGWERVHFVDGRD
Ga0184634_101982031	3300018031	Groundwater Sediment	MTSARFMWLVVVGRGHSSEQRGLTEDLDDAKANVNEHAERLRREGRTDWFGFVLDLDRPTVIGPPGSTHPMLGWERVYLVAGRDRARSSPSS
Ga0184620_100150143	3300018051	Groundwater Sediment	MTSPRFMWLVVAGRGHSSEQRGLTEDLDDAKANVNEHAERLRREGRTDWFGFVLDLDRPTVIAPPGSTPPMLGWERVYFIDGRD
Ga0184626_100095349	3300018053	Groundwater Sediment	MTSSRFMWLVVAGRGHSSEQRSFTEDLEDAKAKVNEHAERLRREGRTDWFGFVLDLDRPTVIAPSTPGTPPILGWERVYFVDGRN
Ga0184621_100048971	3300018054	Groundwater Sediment	GRPLESRLTMTSPRFMWLVVAGRGHSSEQRGLTEDLDDAKANVNEHAERLRREGRTDWFGFVLDLDRPTVIAPPGSTQPMLGWERVYFVAGRDRARSSPSS
Ga0184611_10485274	3300018067	Groundwater Sediment	MTSFRFMWLVVAGRGHSSEQRGFTEDLDEAKADVNEHAERLRRKGRTDWFGFVLDLDRPTVIAPPGSTPPMLGWERVYFIDGRD
Ga0184611_11370282	3300018067	Groundwater Sediment	MRPDERKKLTSPRFMWLVVSGRGHSSEQRGLTEDLDDAKANVNEHAERLRREGRTDWFGFVLDLDRPTVIAPAGSTQPMLGWERVYFVAGRDPARSSPSS
Ga0184618_100785631	3300018071	Groundwater Sediment	MWLVVAGRGHSSEQRGLTEDLDDAKANVNEHAERLRREGRTDWFGFVLDLDRPTVIAPAGSTQPMLGWERVYFVDGRDRARSSPSS
Ga0184635_1000203611	3300018072	Groundwater Sediment	MTAFKFRWAVVAGRGHSSEQLGRSFTEDLDDAKKKVNEHAERLRREGRTDWFGFVLDLDRPTVIAPPGSTVPMLGWERVYFVDGRD
Ga0184635_100035534	3300018072	Groundwater Sediment	MTSPRFMWLVVAGRGHSSEQRGLTEDLDDAKANVNEHAERLRREGRTDWFGFVLDLDRPTVIAPAGSTQPMLGWERVYFVAGRDRARSSPSS
Ga0184632_100854431	3300018075	Groundwater Sediment	IIGTILVAARRRGAHEPGTARGRPLGSRPTMTPSGFMWVVVAGRGHSSEQRGFTEDLDDAKANVNEHAERLRREGRTDWFGFVLDLDRPTVISPPGSTPPMLGWERVYFVDGRD
Ga0184632_101190143	3300018075	Groundwater Sediment	MTSSRFMWRLVVAARGHASEQRSYTEDLEDAKAKVNEHAERLRREGRTDWFGFVLDLDRPTDIATPTRGTPPMLGWERVYFVDGRN
Ga0184633_105192321	3300018077	Groundwater Sediment	MTSARFMWLVVAGRGHSSEQRGFTEDLDDAKANVNEHAERLRREGRTDWFGFVLDLDRPTVIASTTPGTPPILG
Ga0184612_100262108	3300018078	Groundwater Sediment	GSRLTMTSSRFMWLVVAGRGHSSEQRSFTEDLEDAKAKVNEHAERLRREGRTDWFGFVLDLDRPTVIAPSTPGTPPILGWERVYFVDGRN
Ga0184625_100087434	3300018081	Groundwater Sediment	MTSPRFMWLVVVGRGHSSEQRGLTEDLDDAKANVNEHAERLRREGRTDWFGFVLDLDRPTVIAPAGSTQPMLGWERVYFVAGRDRARSSPSS
Ga0184625_105344371	3300018081	Groundwater Sediment	MTASNFMWAVVAGRGHSSEQLGRSFTDDLDDAKAKVNEHAKRLRDEGRTDWFGAVYDLDRPTIIAPPGSTQPMLAWERVYFVDGRD
Ga0184639_103866822	3300018082	Groundwater Sediment	MTSFRFMWLVVAGRGHSSEQRGLTEDLDDAKANVNEHAERLRREGRTDWFGFVLDLDRPTVIAPPGSTPPMLGWERVYFIDGRD
Ga0190269_105485352	3300018465	Soil	MTPSRFMWIVVAGRGHSSEQRGFSEDLDDAEANVNEHAGRLRREGRTDWFGVVLDLDRPTVISPLGSTPPMLGWERMYFVDGRD
Ga0190270_112881961	3300018469	Soil	MTSPRFMWLVVAGRGHSSEQRGLTEDLDDAKANVNEHAERLRREGRTDWFGFVLDLDRPTVISPPGSTQPMLCWERVYFVDGRD
Ga0190274_100069909	3300018476	Soil	MTSSRFMWLVVAGRGHSSEQRGFTEDLDGAKAKVNEHAERLRREGRTDWFGFVLDLDRPTVIAPPGSTQPMLGWERVFFVDGRA
Ga0190271_131346563	3300018481	Soil	MTSSRFMWLVVAGRGHSSEQRGFTEDLDDAKANLNEHAERLRREGRTDWFGFVLDLDRPTVIAPSTPGTPPTLGWERVYFVDGRD
Ga0184645_11923851	3300019233	Groundwater Sediment	MTSPRFMWLVVAGRGHSSEQRGLTEDLDDAKANVNEHAERLRREGRTDWFGFVLDLDRPTVIAPPGSTQPMLGWERVYFVAGRDRARSSP
Ga0190267_107108511	3300019767	Soil	MTSSRFMWLVVAGRGHSSEQRGLTEDLDDAKANVNEHAERLRREGRTDWFGFVLDLDRPTVIAPAGSTQPMLGWERVYFVAGRDRARSSPSS
Ga0193741_10740202	3300019884	Soil	AGRDAAGGRPLGSRPTMTASRFMWIVVAGRGHSSEQRGFTEDLDDAEAKVNEHAGRLRREGRTDWFGVVLDLDRPTVISPPGSTPPMLGWERVYFVDGRD
Ga0193739_10116571	3300020003	Soil	PTMTSSRFMWLVVAGRGHSSEQRSFTQDLEDAKAKVNEHAKRLRREGRTDWFGVVLDLDRPTVIASPTPGTPPILGWERVYFVDGRH
Ga0193697_11005431	3300020005	Soil	RPLESRLTMTSPRFMWLVVAGRGHSSEQRGLTEDLDDAKANVNEHAERLRREGRTDWFGFVLDLDRPTVIAPAGSTQPMLGWERVYFVDGRDRARSSPSS
Ga0193738_10164584	3300020020	Soil	RPLGSRPTMTSSRFMWLVVAGRGHSSEQRSFTQDLEDAKAKVNEHAKRLRREGRTDWFGVVLDLDRPTVIASPTPGTPPILGWERVYFVDGRH
Ga0210382_101153841	3300021080	Groundwater Sediment	MTSPRFMWLVVAGRGHSSEQRGLTEDLDDAKANVNEHAERLRREGRTDWFGFVLDLDRPTVIAPAGSTQPMLGWERVYFVDGRDRARSSPSS
Ga0210380_102061863	3300021082	Groundwater Sediment	MTSARFLWVVVAGKGHSSEPRGLTEDLGDAKAKVNGYTERLRRKGRTDWFGVVLDLDQPTVIAPPGSTQPILGWERVYFVDGRD
Ga0222621_10196521	3300021510	Groundwater Sediment	MTSARFMWLVVAGRGHSSEQRGFTEDLDHARARVNEHAERLRRKSRTDWFGFVLDLDRPTVIAPPGSTQPILGWERVHFVDGRD
Ga0222625_13451921	3300022195	Groundwater Sediment	MTSPRFMWLVVAGRGHSSEQRGLTEDLDDAKANVNEHAERLRREGRTDWFGFVLDLDRPTVITPPGSTQPMLGWERVYFVDGRDRARSSPSS
Ga0224452_10094432	3300022534	Groundwater Sediment	MTSPRFMWLVVAGRGHSSEQRGLTEDLDDAKANVNEHAERLRREGRTDWFGFVLDLDRPTVIAPPGSTQPMLGWERVYFVDGRDRARSSPSS
Ga0207653_100015149	3300025885	Corn, Switchgrass And Miscanthus Rhizosphere	MTSARFLWVVVAGSGHSSEPRGLTEDLGDAMAKVNGYTERLRRKGRTDWFGVVLDLDQPTVIAPPGSTQPILGWERVYFVDGRD
Ga0207650_103453363	3300025925	Switchgrass Rhizosphere	PLESGLTMTSPRFMWLVVAGRGHSSEQRGLTEDLDDAKANVNEHAERLRREGRTDWFGFVLDLDRPTVIAPAGGTQPMLGWERVYFVAGRDRARSSPSS
Ga0207659_102127854	3300025926	Miscanthus Rhizosphere	MTSSRFMWLVVAGRGHSSEQRGFTEALYDAKAKVNEHAERLGRKGRTDWFGFVLDLDRPTVIAPPGSTQPILGWERVYFVDGRG
Ga0207690_105029471	3300025932	Corn Rhizosphere	MTSSRFMWLVVAGRGHSSEQRGFTEALYDAKARVNEHAERLGRKGRTDWFGFVLDLDRPTVIAPPGSTQPILGWERVYFVDGRG
Ga0207668_108920521	3300025972	Switchgrass Rhizosphere	MTSSRFMWLVVAGRGHSSEQRGFTEALYDAKAKVNEHAERLGRKGRTDWFGFVLDLDRPTVIAPAGSTQPMLGWERVYFVAGRDRARSSPSS
Ga0207674_102028303	3300026116	Corn Rhizosphere	MTSPRFMWLVVAGRGHSSEQRGLTEDLDDAKANVNEHAERLRREGRTDWFGFVLDLDRPTVIAPAGGTQPMLGWERVYFVAGRDRARSSPSS
Ga0208891_10010461	3300026878	Soil	MTSSRFMWLVVAGRGHSSEQRGFTENLDDSKAKVNEHAERLRREGRTDWFGFVLDLDRPTVIASPTPGTPPILGWERVYFADGRK
Ga0207444_10006943	3300026900	Soil	LTSARFLWVVVAGSGHSSEPRGLTEDLGDAMAKVNGYTERLRRKGRTDWFGVVLDLDQPTVIAPPGSTQPILGWERVYFVDGRD
Ga0207570_10131681	3300026944	Soil	MTSSRFMWLVVAGRGHSSEQRGFTEALYDAKARVNEHAERLGRKGRTDWFGFVLDLDRPTVIAPPGSTQPILGWERVYFVDGRD
Ga0209878_10034841	3300027163	Groundwater Sand	MTAYRFIWIVVAGRGHSSEQRGFSEDLDDAEANVNEHAGRLRREGRTDWFGVVLDLDQPTVISPPGNTPPML
Ga0209842_10117581	3300027379	Groundwater Sand	PDASTGAARDAAGGRPLGSRPTMTAYRFIWIVVAGRGHSSEQRGFSEDLDDAEANVNEHAGRLRREGRTDWFGVVLDLDQPTVISPPGNTPPMLGWERVYFVDGRN
Ga0209842_10711321	3300027379	Groundwater Sand	MTSFRFMWLVVAGRGHSSEQRGFTEDLDEAKANVNEHAERLRRKGRTDWFGFVLDLDRPTVIAPHGSTQPILGWERVYFVDGRN
Ga0207599_1014721	3300027451	Soil	MTSARFLWVVVAGSGHSSEPRGLTEDLGDAMAKVNGYTERLRRKGRTDWFGVVLDLDQPTVIAPPGSTQPILGWERVYFVDG
Ga0209899_11068411	3300027490	Groundwater Sand	GHSSEQRSFTEDLEDAKAKVNEHAERLRREGRTDWFGFVLDLDRPTVIAPSTPGTPPILGWERVYFVDGRN
Ga0208890_10003215	3300027523	Soil	MTASRFMWLVVAGRGHSSEQRSCTEDLEDAKAKVNEHAERLRREGRTDWFGFVLDLDRPTVIASPTPGTPPILGWERVYFADGRK
Ga0208890_10136611	3300027523	Soil	MTSARFMWLVVAGRGHSSEQRGFTEDLDHAMARVNEHAERLRRKSRTDWFGFVLDLDRPTVIAPPGSTQPILGWERVHFVDGRD
Ga0209874_10173211	3300027577	Groundwater Sand	MMTSPRFMWLVVAGRGHSSEQRGLTEDLDDAKANVNEHAERLRREGRTDWFGVVLALDQPTLISPPGSTLPMLGWERVYFVDGRN
Ga0209874_10247092	3300027577	Groundwater Sand	VVAGRGHSSEQRSFTEDLEDAKAKVHEHAERLRREGRTDWFGFVLDLDRPTVIAPSTPGTPPILGWERMYFVDGRN
Ga0209819_100360553	3300027722	Freshwater Sediment	MTAYRFIWIVVAGRGHSSEQRGFSEDLDDAEANVNEHAGRLRREGRTDWFGVVLDLDQPTVISPPGNTPPMLGWERVYFVDGRN
Ga0209819_100659524	3300027722	Freshwater Sediment	MTASRFMWIVVAGRGHSSEQRGFTEDLDDAEAKVNEHAGRLRREGRTDWFGVVLDLDRPTVISPPGGTPPMLGWERVYFVDGRD
Ga0209814_100315961	3300027873	Populus Rhizosphere	MTSSRFMWLVVAGRGHSSEQRGFTEDQDDAKAKVTEHAERLRRKGRTDWFGFVLDLDRPTVIGPPGSTPPMLGWERVYFVDGRY
Ga0209382_115407552	3300027909	Populus Rhizosphere	MTSSRFMWLVVAGRGHSSEQRGFTEALYDAKAKVNEHAERLGRKGRTDWFGFVLDLDRPTVIAPPGSTQPILGWERVY
Ga0209860_10092632	3300027949	Groundwater Sand	RLTMTSSRFMWLVVAGRGHSSEQRSFTEDLEDAKAKVNEHAERLRREGRTDWFGFVLDLDRPTVIAPSTPGTPPILGWERVYFVDGRN
Ga0307319_101116873	3300028722	Soil	EQRGLTEDLDDAKANVNEHAERLRREGRTDWFGFVLDLDRPTVIAPAGSTQPMLGWERVYFVAGRDRARSSPSS
Ga0307316_102904882	3300028755	Soil	MTSARFMWLVVAGRGHSSEQRGFTEDLDHARARVNEHAERLRRKSRTDWFGFVLDLDRPTVIAPPGSTQPILGWE
Ga0307320_100120401	3300028771	Soil	MTSARFMWLVVAGRGHSSEQRGFTEDLDHARARVNEHAERLRRKSRTDWFGFVLDLDRPTVIAPPGSTQPILGW
Ga0307290_100256351	3300028791	Soil	FRFMWLVVAGRGHSSEQRGFTEDLDEAKANVNEHAERLRRKGRTDWFGFVLDLDRPTVIAPPGSTPPMLGWERVYFIDGRD
Ga0307290_101697431	3300028791	Soil	RHAARGRPLESRLTMTSPRFMWLVVAGRGHSSEQRGLTEDLDDAKANVNEHAERLRREGRTDWFGFVLDLDRPTVIAPAGSTQPMLGWERVYFVAGRDRARSSPSS
Ga0307302_104658502	3300028814	Soil	MWLVVVGRGHSSEQRGLTEDLDDAKANVNEHAERLRREGRTDWFGFVLDLDRPTVIAPAGSTQPMLGWERVYFVAGRDRARSSPSS
Ga0307312_107136421	3300028828	Soil	GASRRHAARGRPLESRLTMTSPRFMWLVVAGRGHSSEQRGLTEDLDDAKANVNEHAERLRREGRTDWFGFVLDLDRPTVIAPPGSTQPMLGWERVYFVAGRDRARSSPSS
Ga0307289_104908971	3300028875	Soil	MTSPRFMWLVVAGRGHSSEQRGLTEDLDDAKANVNEHAERLRREGRTDWFGFVLDLDRPTVIAPAGSTQPMLGWERVYFVDGRDRARSS
Ga0299906_100535442	3300030606	Soil	MWLVVAGRGHSSEQRGFTEDLDGAKAKVNEHAERLRREGRTDWFGFVLDLDRPTVIAPPGSTQPMLGWERVFFIDGRD
Ga0302046_112005391	3300030620	Soil	MTSSRFMWLVVAGRGHSSEQRGFTEDLDGAKAKVNEHAERLRREGRTDWFGFVLDLDRPTVIAPPGSTQPMLGWERVFFIDGRD
Ga0307468_1000820382	3300031740	Hardwood Forest Soil	MTSARFMWLVVAGRGHSSEQRGFTEDLDHARARVSEHAERLRRKSRTDWFGLVLDLDRPTVIAPPGSTQPILGWERVHFVDGRD
Ga0307471_1002954742	3300032180	Hardwood Forest Soil	MTSARFMWLVVAGRGHSSEQRGFTEDLDHARARVNEHAERLRRKSRTDWFGFVLDLDRPTVIGPPGSTQPILGWERVHFVDGRD
Ga0214471_113382791	3300033417	Soil	MTSSRFMWLVVAGRGHSSEQRGFTEDLDDAKANVNEHAERLRREGRTDWFGFVLDLDRPTVIAPPGSTQPMLGWERVFFIDGRD
Ga0364943_0396866_219_473	3300034354	Sediment	MTSARFLWVVVAGKGHSSEPRGLTEDLGDAKAKVNGYTERLRRKGRTDWFGVVLDLDQPTDIAPPGSTQPILGWERVYFVDGRD

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F051250

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences