Metagenome / Metatranscriptome Family F051312

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F051312
Family Type	Metagenome / Metatranscriptome
Number of Sequences	144
Average Sequence Length	49 residues
Representative Sequence	MNATRTLLAAMVLGTAIGAVQANAQCSGNAGTCNTTNTASVTVGALVK
Number of Associated Samples	119
Number of Associated Scaffolds	144

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	95.83 %
% of genes near scaffold ends (potentially truncated)	98.61 %
% of genes from short scaffolds (< 2000 bps)	91.67 %
Associated GOLD sequencing projects	115
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.26

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (56.944 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (20.139 % of family members)
Environment Ontology (ENVO)	Unclassified (32.639 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (38.194 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Fibrous	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 34.21% β-sheet: 0.00% Coil/Unstructured: 65.79%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.26
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.26
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 144 Family Scaffolds
PF13193	AMP-binding_C	25.00
PF00593	TonB_dep_Rec	2.78
PF00535	Glycos_transf_2	1.39
PF12697	Abhydrolase_6	1.39
PF13633	Obsolete Pfam Family	1.39
PF00005	ABC_tran	1.39
PF00174	Oxidored_molyb	1.39
PF00486	Trans_reg_C	0.69
PF13432	TPR_16	0.69
PF16177	ACAS_N	0.69
PF04932	Wzy_C	0.69
PF01578	Cytochrom_C_asm	0.69

COG ID	Name	Functional Category	% Frequency in 144 Family Scaffolds
COG2041	Molybdopterin-dependent catalytic subunit of periplasmic DMSO/TMAO and protein-methionine-sulfoxide reductases	Energy production and conversion [C]	1.39
COG3915	Uncharacterized conserved protein	Function unknown [S]	1.39
COG3307	O-antigen ligase	Cell wall/membrane/envelope biogenesis [M]	0.69

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	56.94 %
Unclassified	root	N/A	43.06 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	56.94 %
Unclassified	root	N/A	43.06 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	56.94 %
Unclassified	root	N/A	43.06 %

Name	Rank	Taxonomy	Distribution
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	48.61 %
Unclassified	root	N/A	43.06 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.69 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	0.69 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	48.61 %
Unclassified	root	N/A	43.06 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.69 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.06 %
unclassified Gemmatimonadetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes	31.94 %
Gemmatimonadetes	class	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes	4.17 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.69 %
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.06 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	26.39 %
Gemmatimonadetes bacterium 13_1_40CM_2_60_3	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium 13_1_40CM_2_60_3	5.56 %
Gemmatimonadales	order	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales	4.17 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	0.69 %
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.06 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	26.39 %
Gemmatimonadetes bacterium 13_1_40CM_2_60_3	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium 13_1_40CM_2_60_3	5.56 %
Gemmatimonadaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	4.17 %
Candidatus Rokubacteria bacterium RIFCSPLOWO2_12_FULL_71_22	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium RIFCSPLOWO2_12_FULL_71_22	0.69 %
Gordoniaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Gordoniaceae	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.06 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	26.39 %
Gemmatimonadetes bacterium 13_1_40CM_2_60_3	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium 13_1_40CM_2_60_3	5.56 %
Gemmatirosa	genus	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa	2.08 %
Gordonia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Gordoniaceae → Gordonia	0.69 %
Candidatus Rokubacteria bacterium RIFCSPLOWO2_12_FULL_71_22	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium RIFCSPLOWO2_12_FULL_71_22	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.06 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	26.39 %
Gemmatimonadetes bacterium 13_1_40CM_2_60_3	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium 13_1_40CM_2_60_3	5.56 %
Gemmatirosa kalamazoonesis	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	2.08 %
Gordonia rhizosphera	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Gordoniaceae → Gordonia → Gordonia rhizosphera	0.69 %
Candidatus Rokubacteria bacterium RIFCSPLOWO2_12_FULL_71_22	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium RIFCSPLOWO2_12_FULL_71_22	0.69 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2124908043\|A2_c1_ConsensusfromContig56115	All Organisms → cellular organisms → Bacteria	977	Open in IMG/M
2228664021\|ICCgaii200_c0213441	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	501	Open in IMG/M
3300001139\|JGI10220J13317_10839018	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	625	Open in IMG/M
3300001324\|A2635W6_115145	Not Available	735	Open in IMG/M
3300001526\|A105W1_1008368	Not Available	718	Open in IMG/M
3300001664\|P5cmW16_1063411	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	611	Open in IMG/M
3300001664\|P5cmW16_1082567	Not Available	502	Open in IMG/M
3300003391\|JGI26135J50243_101681	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	645	Open in IMG/M
3300004156\|Ga0062589_101037691	All Organisms → cellular organisms → Bacteria	769	Open in IMG/M
3300004157\|Ga0062590_101646555	Not Available	651	Open in IMG/M
3300004157\|Ga0062590_102054430	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Gordoniaceae → Gordonia → Gordonia rhizosphera	594	Open in IMG/M
3300004479\|Ga0062595_100532309	Not Available	893	Open in IMG/M
3300005093\|Ga0062594_100098224	Not Available	1737	Open in IMG/M
3300005171\|Ga0066677_10755127	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	541	Open in IMG/M
3300005171\|Ga0066677_10782351	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	529	Open in IMG/M
3300005175\|Ga0066673_10854573	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium 13_1_40CM_2_60_3	519	Open in IMG/M
3300005184\|Ga0066671_10047751	All Organisms → cellular organisms → Bacteria	2143	Open in IMG/M
3300005289\|Ga0065704_10854782	Not Available	508	Open in IMG/M
3300005328\|Ga0070676_10499011	All Organisms → cellular organisms → Bacteria	864	Open in IMG/M
3300005333\|Ga0070677_10021635	Not Available	2362	Open in IMG/M
3300005339\|Ga0070660_100433881	Not Available	1089	Open in IMG/M
3300005356\|Ga0070674_100804931	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	812	Open in IMG/M
3300005364\|Ga0070673_101008810	Not Available	775	Open in IMG/M
3300005364\|Ga0070673_101732037	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium 13_1_40CM_2_60_3	592	Open in IMG/M
3300005406\|Ga0070703_10069528	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1173	Open in IMG/M
3300005435\|Ga0070714_100880633	All Organisms → cellular organisms → Bacteria	869	Open in IMG/M
3300005440\|Ga0070705_100742419	Not Available	775	Open in IMG/M
3300005444\|Ga0070694_101532678	Not Available	565	Open in IMG/M
3300005451\|Ga0066681_10858677	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	546	Open in IMG/M
3300005451\|Ga0066681_10978788	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	505	Open in IMG/M
3300005467\|Ga0070706_101714613	Not Available	572	Open in IMG/M
3300005518\|Ga0070699_100277295	Not Available	1501	Open in IMG/M
3300005544\|Ga0070686_101693178	Not Available	537	Open in IMG/M
3300005545\|Ga0070695_100346907	Not Available	1111	Open in IMG/M
3300005545\|Ga0070695_101697199	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	529	Open in IMG/M
3300005546\|Ga0070696_101679219	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	547	Open in IMG/M
3300005547\|Ga0070693_100121469	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium 13_1_40CM_2_60_3	1621	Open in IMG/M
3300005578\|Ga0068854_100966204	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium RIFCSPLOWO2_12_FULL_71_22	752	Open in IMG/M
3300005614\|Ga0068856_101275498	All Organisms → cellular organisms → Bacteria	750	Open in IMG/M
3300005615\|Ga0070702_101411672	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	570	Open in IMG/M
3300005844\|Ga0068862_101299345	Not Available	729	Open in IMG/M
3300005873\|Ga0075287_1038849	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	635	Open in IMG/M
3300005873\|Ga0075287_1041209	Not Available	620	Open in IMG/M
3300006046\|Ga0066652_101729373	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	569	Open in IMG/M
3300006175\|Ga0070712_101830274	Not Available	532	Open in IMG/M
3300006854\|Ga0075425_100035367	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	5564	Open in IMG/M
3300006854\|Ga0075425_100603650	Not Available	1262	Open in IMG/M
3300006876\|Ga0079217_10041503	Not Available	1793	Open in IMG/M
3300007076\|Ga0075435_101660657	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	561	Open in IMG/M
3300007255\|Ga0099791_10020847	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	2815	Open in IMG/M
3300009012\|Ga0066710_100063052	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	4695	Open in IMG/M
3300009012\|Ga0066710_100707127	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1537	Open in IMG/M
3300009098\|Ga0105245_12808514	Not Available	540	Open in IMG/M
3300010039\|Ga0126309_10609560	Not Available	688	Open in IMG/M
3300010219\|Ga0136220_1010703	Not Available	1052	Open in IMG/M
3300011269\|Ga0137392_10592019	Not Available	920	Open in IMG/M
3300011271\|Ga0137393_11709519	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	518	Open in IMG/M
3300011991\|Ga0120153_1020524	Not Available	1498	Open in IMG/M
3300012001\|Ga0120167_1115690	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium 13_1_40CM_2_60_3	540	Open in IMG/M
3300012199\|Ga0137383_10033695	All Organisms → cellular organisms → Bacteria	3611	Open in IMG/M
3300012203\|Ga0137399_11561294	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	548	Open in IMG/M
3300012207\|Ga0137381_10762942	Not Available	839	Open in IMG/M
3300012208\|Ga0137376_11333464	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	608	Open in IMG/M
3300012285\|Ga0137370_10371458	Not Available	863	Open in IMG/M
3300012285\|Ga0137370_10767460	Not Available	598	Open in IMG/M
3300012361\|Ga0137360_10316473	Not Available	1299	Open in IMG/M
3300012924\|Ga0137413_10548182	Not Available	858	Open in IMG/M
3300012927\|Ga0137416_10283145	Not Available	1367	Open in IMG/M
3300012951\|Ga0164300_10832795	Not Available	576	Open in IMG/M
3300012951\|Ga0164300_11116796	Not Available	516	Open in IMG/M
3300012958\|Ga0164299_10818400	Not Available	666	Open in IMG/M
3300012972\|Ga0134077_10305580	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	669	Open in IMG/M
3300013766\|Ga0120181_1101796	Not Available	629	Open in IMG/M
3300014157\|Ga0134078_10172699	Not Available	864	Open in IMG/M
3300014157\|Ga0134078_10607946	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium 13_1_40CM_2_60_3	524	Open in IMG/M
3300018027\|Ga0184605_10147909	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1056	Open in IMG/M
3300018051\|Ga0184620_10205150	Not Available	656	Open in IMG/M
3300018061\|Ga0184619_10008229	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	4016	Open in IMG/M
3300018061\|Ga0184619_10355028	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	668	Open in IMG/M
3300018066\|Ga0184617_1075313	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	905	Open in IMG/M
3300018071\|Ga0184618_10136489	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	993	Open in IMG/M
3300018071\|Ga0184618_10174445	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	889	Open in IMG/M
3300018071\|Ga0184618_10452434	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	540	Open in IMG/M
3300018084\|Ga0184629_10490419	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	641	Open in IMG/M
3300018429\|Ga0190272_10990608	Not Available	801	Open in IMG/M
3300018482\|Ga0066669_10350284	All Organisms → cellular organisms → Bacteria	1226	Open in IMG/M
3300019865\|Ga0193748_1024559	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	567	Open in IMG/M
3300019877\|Ga0193722_1041391	Not Available	1180	Open in IMG/M
3300019877\|Ga0193722_1083747	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	780	Open in IMG/M
3300019878\|Ga0193715_1089200	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	632	Open in IMG/M
3300020000\|Ga0193692_1070734	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	771	Open in IMG/M
3300020015\|Ga0193734_1002991	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	3035	Open in IMG/M
3300020018\|Ga0193721_1094865	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	767	Open in IMG/M
3300020022\|Ga0193733_1054556	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1127	Open in IMG/M
3300020059\|Ga0193745_1008610	Not Available	2194	Open in IMG/M
3300020059\|Ga0193745_1038559	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1048	Open in IMG/M
3300020070\|Ga0206356_11217919	Not Available	566	Open in IMG/M
3300021080\|Ga0210382_10479341	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	551	Open in IMG/M
3300021415\|Ga0193694_1016582	Not Available	1008	Open in IMG/M
3300021953\|Ga0213880_10229196	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	529	Open in IMG/M
3300021968\|Ga0193698_1013319	Not Available	1051	Open in IMG/M
3300022534\|Ga0224452_1112197	All Organisms → cellular organisms → Bacteria	836	Open in IMG/M
3300022756\|Ga0222622_10068841	Not Available	2074	Open in IMG/M
3300022756\|Ga0222622_10128452	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1604	Open in IMG/M
3300024283\|Ga0247670_1078996	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium 13_1_40CM_2_60_3	601	Open in IMG/M
3300024331\|Ga0247668_1102379	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium 13_1_40CM_2_60_3	580	Open in IMG/M
3300025505\|Ga0207929_1003592	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	3264	Open in IMG/M
3300025911\|Ga0207654_11158153	Not Available	563	Open in IMG/M
3300025912\|Ga0207707_11560409	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	521	Open in IMG/M
3300025917\|Ga0207660_10863378	Not Available	738	Open in IMG/M
3300025919\|Ga0207657_10379458	Not Available	1113	Open in IMG/M
3300025933\|Ga0207706_11611331	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	526	Open in IMG/M
3300025934\|Ga0207686_11403770	Not Available	575	Open in IMG/M
3300025938\|Ga0207704_11346266	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	611	Open in IMG/M
3300025938\|Ga0207704_11363054	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	607	Open in IMG/M
3300025960\|Ga0207651_11295440	Not Available	655	Open in IMG/M
3300025981\|Ga0207640_11645679	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	579	Open in IMG/M
3300025986\|Ga0207658_11810760	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	557	Open in IMG/M
3300026041\|Ga0207639_11053660	Not Available	762	Open in IMG/M
3300026223\|Ga0209840_1032977	Not Available	1181	Open in IMG/M
3300026310\|Ga0209239_1359223	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	510	Open in IMG/M
3300026323\|Ga0209472_1294247	Not Available	519	Open in IMG/M
3300026538\|Ga0209056_10723769	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium 13_1_40CM_2_60_3	504	Open in IMG/M
3300027603\|Ga0209331_1160159	Not Available	530	Open in IMG/M
3300027665\|Ga0209983_1133780	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	567	Open in IMG/M
3300028711\|Ga0307293_10161670	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	713	Open in IMG/M
3300028711\|Ga0307293_10165045	Not Available	705	Open in IMG/M
3300028715\|Ga0307313_10082532	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	967	Open in IMG/M
3300028784\|Ga0307282_10116022	Not Available	1252	Open in IMG/M
3300028793\|Ga0307299_10042254	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1672	Open in IMG/M
3300028799\|Ga0307284_10232708	Not Available	730	Open in IMG/M
3300028807\|Ga0307305_10070620	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1611	Open in IMG/M
3300028824\|Ga0307310_10547891	Not Available	586	Open in IMG/M
3300028828\|Ga0307312_10004055	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	7851	Open in IMG/M
3300028828\|Ga0307312_10091298	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1876	Open in IMG/M
3300028828\|Ga0307312_10122685	Not Available	1629	Open in IMG/M
3300028828\|Ga0307312_10810203	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	620	Open in IMG/M
3300031716\|Ga0310813_10277040	All Organisms → cellular organisms → Bacteria	1407	Open in IMG/M
3300031720\|Ga0307469_10267809	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1387	Open in IMG/M
3300031720\|Ga0307469_11425218	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	661	Open in IMG/M
3300031740\|Ga0307468_102162170	Not Available	537	Open in IMG/M
3300031740\|Ga0307468_102486796	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	507	Open in IMG/M
3300032180\|Ga0307471_100546743	Not Available	1312	Open in IMG/M
3300034384\|Ga0372946_0107643	Not Available	1310	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	81.25%
Host-Associated	Host-Associated	18.06%
Engineered	Engineered	0.69%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	72.22%
Plants	Host-Associated → Plants	18.06%
Aquatic	Environmental → Aquatic	9.03%
Lab Enrichment	Engineered → Lab Enrichment	0.69%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	71.53%
Rhizosphere	Host-Associated → Plants → Rhizosphere	11.11%
Sediment	Environmental → Aquatic → Sediment	8.33%
Rhizoplane	Host-Associated → Plants → Rhizoplane	6.94%
Freshwater	Environmental → Aquatic → Freshwater	0.69%
Rock-Dwelling (Subaerial Biofilms)	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms)	0.69%
Unclassified	Engineered → Lab Enrichment → Unclassified	0.69%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	56.25%
Loam	Environmental → Terrestrial → Soil → Loam	13.19%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	8.33%
Soil	Host-Associated → Plants → Rhizosphere → Soil	6.94%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	6.25%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	4.17%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.08%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.69%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified	0.69%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.69%
Unclassified	Engineered → Lab Enrichment → Unclassified → Unclassified	0.69%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	31.94%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	10.42%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	8.33%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	8.33%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	6.94%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	6.25%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	6.25%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	5.56%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	4.17%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	4.17%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	2.08%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.39%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.69%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.69%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.69%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified	0.69%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.69%
Unclassified	Engineered → Lab Enrichment → Unclassified → Unclassified → Unclassified	0.69%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	20.14%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	8.33%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	7.64%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	6.25%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	5.56%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	4.86%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	3.47%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.47%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.78%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	2.78%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	2.78%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	2.08%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	2.08%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.08%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	2.08%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.08%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	2.08%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	2.08%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	1.39%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.39%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	1.39%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.39%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.39%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.69%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.69%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.69%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.69%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	0.69%
Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Soil	0.69%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	0.69%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.69%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.69%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.69%
Exposed Rock	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified → Exposed Rock	0.69%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere	0.69%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.69%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.69%
Soil	Engineered → Lab Enrichment → Unclassified → Unclassified → Unclassified → Soil	0.69%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2124908043	Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Active Layer A2	Environmental	Open in IMG/M
2228664021	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300001139	Soil microbial communities from Great Prairies - Wisconsin, Switchgrass soil	Environmental	Open in IMG/M
3300001324	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A26-35cm)- 6 month illumina	Environmental	Open in IMG/M
3300001526	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A10-5cm-1A)- 1 week illumina	Environmental	Open in IMG/M
3300001664	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - 5cm_reassembled	Environmental	Open in IMG/M
3300003391	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 PM	Host-Associated	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005184	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120	Environmental	Open in IMG/M
3300005289	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2	Host-Associated	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005333	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG	Host-Associated	Open in IMG/M
3300005339	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG	Host-Associated	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005406	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300005873	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_0N_301	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006876	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200	Environmental	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300010039	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot56	Environmental	Open in IMG/M
3300010219	Soil microbial communities from Bangor area, North Wales, UK, before enrichment, after WGA	Engineered	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300011991	Permafrost microbial communities from Nunavut, Canada - A34_65cm_12M	Environmental	Open in IMG/M
3300012001	Permafrost microbial communities from Nunavut, Canada - A24_80cm_12M	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012972	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300013766	Permafrost microbial communities from Nunavut, Canada - A26_65cm_6M	Environmental	Open in IMG/M
3300014157	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300018027	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coex	Environmental	Open in IMG/M
3300018051	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_b1	Environmental	Open in IMG/M
3300018061	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1	Environmental	Open in IMG/M
3300018066	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_b1	Environmental	Open in IMG/M
3300018071	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1	Environmental	Open in IMG/M
3300018084	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_b1	Environmental	Open in IMG/M
3300018429	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 T	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019865	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1s1	Environmental	Open in IMG/M
3300019877	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2m1	Environmental	Open in IMG/M
3300019878	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2m2	Environmental	Open in IMG/M
3300020000	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3a1	Environmental	Open in IMG/M
3300020015	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1m1	Environmental	Open in IMG/M
3300020018	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2s2	Environmental	Open in IMG/M
3300020022	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1s2	Environmental	Open in IMG/M
3300020059	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1a2	Environmental	Open in IMG/M
3300020070	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300021080	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redo	Environmental	Open in IMG/M
3300021415	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3s1	Environmental	Open in IMG/M
3300021953	Barbacenia macrantha exposed rock microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - ER_R07	Environmental	Open in IMG/M
3300021968	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3c1	Environmental	Open in IMG/M
3300022534	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_b1	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300024283	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK11	Environmental	Open in IMG/M
3300024331	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK09	Environmental	Open in IMG/M
3300025505	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 53-1 deep-072012 (SPAdes)	Environmental	Open in IMG/M
3300025911	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025912	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025919	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025981	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025986	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026041	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026223	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 2 DNA2013-190 (SPAdes)	Environmental	Open in IMG/M
3300026310	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm (SPAdes)	Environmental	Open in IMG/M
3300026323	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130 (SPAdes)	Environmental	Open in IMG/M
3300026538	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)	Environmental	Open in IMG/M
3300027603	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027665	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 S PM (SPAdes)	Host-Associated	Open in IMG/M
3300028711	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_150	Environmental	Open in IMG/M
3300028715	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_203	Environmental	Open in IMG/M
3300028784	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121	Environmental	Open in IMG/M
3300028793	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_159	Environmental	Open in IMG/M
3300028799	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_123	Environmental	Open in IMG/M
3300028807	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_186	Environmental	Open in IMG/M
3300028824	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300034384	Forest soil microbial communities from Eldorado National Forest, California, USA - SNFC_MG_KNG_2.2	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
A2_c1_00025280	2124908043	Soil	MFATRYLLAATVLGSALCVSQANAQCSGNAGGCLTV
ICCgaii200_02134411	2228664021	Soil	MKATRNLLAAMVLGTIIIASQANAQCSGNAGSCNTTNTASVTVGALVKLGM
JGI10220J13317_108390182	3300001139	Soil	MKATRNLLAAMVLGTIITASQANAQCSGNAGSCNTTNTASVTVGALVKLGMSAATTSLTS
A2635W6_1151451	3300001324	Permafrost	MKATRLLLAAMVLGTAIGASQANAQCSSSSGSCFTTN
A105W1_10083681	3300001526	Permafrost	MKATRSLLAAMVLGTAIGASQANAQCSSNSGSCNTTN
P5cmW16_10634111	3300001664	Permafrost	MKATRFLLAAMVLGSAISARQANAQLQCSGNAGGCLVVNTASATVNALVKLTMSATTTP*
P5cmW16_10825672	3300001664	Permafrost	MKATRSLLAAMVLGTVVGASQANAQCSSVGATGTCSTTNT
JGI26135J50243_1016811	3300003391	Arabidopsis Thaliana Rhizosphere	MKATRNLLAAMVLGTIITASQANAQCSGNAGSCNTTNTASVTVGALVKLGMSAATTSLTSPTAD
Ga0062589_1010376912	3300004156	Soil	MKATNSLLAAIALVSAIGATQANAQCSGNAGSCNTTNTASVTVGTLVKLGM
Ga0062590_1016465552	3300004157	Soil	MAAMVLGTAIVTSQANAQCSGNAGTCNTTNTASVTVGALVK
Ga0062590_1020544301	3300004157	Soil	MKATRILLAAMVLGIAIGASQANAQSCSSSAGSCVTTNTASATVGTMVKLDLGSATTA
Ga0062595_1005323091	3300004479	Soil	MKATRLLAAMVLGTAIGASQANAQCSGNTGSCNTTNTASVTVGAL
Ga0062594_1000982241	3300005093	Soil	MKATRTLLAAMVLGTAIGASQASAQCSGNAGSCNTTNTASVTVGALVKLGMSSA
Ga0066677_107551271	3300005171	Soil	MNATRFILAAMVLGSAISVNQAGAQCSGNAGSCNTTNTAS
Ga0066677_107823511	3300005171	Soil	MNATRSLLAAMVLGTAIGASQANAQCSGNSGSCNTTNTASVTVGALVKL
Ga0066673_108545732	3300005175	Soil	MNATRTLLAAMVLVSAIGVNQAGAQCSGNAGGCLTVNTAS
Ga0066671_100477511	3300005184	Soil	MNATRFLLAAMVLGSAISVNQASAQCSGNAGSCNTTNTASV
Ga0065704_108547821	3300005289	Switchgrass Rhizosphere	MNATRFLLAAMVLGTAIGVEANAQCSGNAGSCNTTNTASVSVNALVKL
Ga0070676_104990113	3300005328	Miscanthus Rhizosphere	MVLGTAISANQAGAQCSGNAGGCLTINTASATVNALVKLGMS
Ga0070677_100216353	3300005333	Miscanthus Rhizosphere	MNATRFILAAMVIGSAICVNQASAQCSGNGSCNLTNTVSASVN
Ga0070660_1004338811	3300005339	Corn Rhizosphere	MKATNSLLAAIALVSAIGATQANAQCSGNAGSCNTTNTASVTVGTLVKLGMSS
Ga0070674_1008049312	3300005356	Miscanthus Rhizosphere	MKATRTLLAAMVLGTAIGASQASAQCSGNAGSCNTTNTASVTVGALVKLGMSSATTTLTNPTADDVD
Ga0070673_1010088102	3300005364	Switchgrass Rhizosphere	MKATRFLAAMVLATAIGATEASAQCSGNAGSCNTTNTASVTV
Ga0070673_1017320371	3300005364	Switchgrass Rhizosphere	MSATRYLLAAMVLGSAISATQANAQCSGNAGGCLTVNTASATVNALVKLGMSGTTTTLTSPTAD
Ga0070703_100695284	3300005406	Corn, Switchgrass And Miscanthus Rhizosphere	MSATRYLLAAMVLGSAISATQANAQCSGNAGGCLTVNTASATVNALVKL
Ga0070714_1008806331	3300005435	Agricultural Soil	MNATRNLLAAMVLGTAICASQANAQCSGNTGTCNTTNTASVTVGAL
Ga0070705_1007424192	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MKATRSLLAAMVLATAIGASQAAAQCSGNGGSCNTTNTASVTVGALV
Ga0070694_1015326781	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	MKATRFLLAAMVLGSAISVSQASAQCSGNAGGCLTVNTASATVNALVKLGMSATTT
Ga0066681_108586771	3300005451	Soil	MNATRTLLAAMVLVSAIGVSQADAQCSGNAGGCLTVNTASATVNALVKL
Ga0066681_109787881	3300005451	Soil	MKATRSLLAAMVLATAIGATEANAQCSGNAGSCNTTNTASVTVGALVKLGMSS
Ga0070706_1017146131	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MKATRYLLAAMALGTAIGASEANAQCSGNAGSCNTTNTASVTVGALVKLGMSSATT
Ga0070699_1002772951	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MKATRFLLAAMVLGSAISVSQASAQCSGNAGGCLTVNTASATVNALVKLGMSA
Ga0070686_1016931782	3300005544	Switchgrass Rhizosphere	MNATRFVLAAMVLGTAISANQAGAQCSGNAGGCLTINTASATVNA
Ga0070695_1003469071	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	MKATRLLAAMVLGTAIGASQANAQCSGNTGSCNTTNTASVTVGALVKLGMSAATTSLTNPTADD
Ga0070695_1016971991	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	MNATRFFLAAMVIGSAISVTQAGAQCSGNAGSCNTTNTASVSVNALVKL
Ga0070696_1016792191	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	MKATRSLLAAMVLATAIGASQAAAQCSGNGGSCNTTNTASVTVGALVKLGMS
Ga0070693_1001214694	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	MNANRFLLAALVLGSLAGANQANAQCSGNAGGCLTINTASATVNALVKLGMSATTTTISSPT
Ga0068854_1009662042	3300005578	Corn Rhizosphere	MKATRTILAAMVLGTVIGASQANAQCTGNAGTCNTTNTASVTVGA
Ga0068856_1012754981	3300005614	Corn Rhizosphere	MRATRTLLAAMVLGTAISASQANAQCSGNAGTCNTTNTASVTVGALVKLGMSSAATALTNPTADDV
Ga0070702_1014116722	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	MNATRFILAAMVLGSAISVNQASAQCSGNAGSCNTTNTVTASVNALVK
Ga0068862_1012993452	3300005844	Switchgrass Rhizosphere	MNATRFILAAMVIGSTISVNQAGAQCSGNAGSCNSTNTASVT
Ga0075287_10388491	3300005873	Rice Paddy Soil	MRSTRSLLTAMVLGTVIGASQVNAQCSGNGGSCNTTNTASVTVGALVKLGMSSA
Ga0075287_10412091	3300005873	Rice Paddy Soil	MNATRFLLAAMVLGSAIGVNQADAQCSSNAGSCNTTNTA
Ga0066652_1017293733	3300006046	Soil	MKATRFLLAAMVLATAIGASQANAQCSGNAGSCNT
Ga0070712_1018302742	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MNATRIVMAALVLGTAIGANKADAQCSGNTGSCNTTNTA
Ga0075425_1000353678	3300006854	Populus Rhizosphere	MNATRLILAAMVLGSAIGVNQADAQCSGNAGSCNTTNT
Ga0075425_1006036502	3300006854	Populus Rhizosphere	MKATRFLAAMVLATAIGATQANAQCSGNAGSCNTTNTASVTVGALVKLVMSSATTTLT
Ga0079217_100415031	3300006876	Agricultural Soil	MNSTRFVLAAMVLGTALGSSQASAQGCIGSGSCNATNTASVSVGALVKLDM
Ga0075435_1016606572	3300007076	Populus Rhizosphere	MNATRFVLAAMVLGTAIGANQANAQCSGNAGSCNSTNTVSATVNALVKLGMSA
Ga0099791_100208471	3300007255	Vadose Zone Soil	MKATRFLLAAMVLGSAISVSQANAQCSGNAGGCLTVNTASATVNALVKLG
Ga0066710_1000630521	3300009012	Grasslands Soil	MNATRSFLAAMVLVFAISANQASAQCSGNAGGCLTVNTASAT
Ga0066710_1007071271	3300009012	Grasslands Soil	MNATRSFLAAMVLVFAISANQASAQCSGNAGGCLTVNTASATVNALVKLGM
Ga0105245_128085141	3300009098	Miscanthus Rhizosphere	MKATRTILAAMVLGTVIGASQANAQCTGNAGTCNTTNT
Ga0126309_106095602	3300010039	Serpentine Soil	MKATRTLLAAMVLGTAITAAQANAQCSGNAGSCNTTNTASVTVGALVKLGMSAATT
Ga0136220_10107031	3300010219	Soil	MTATRSILAAMVLGAAISVNQAGAQCSGNAGSCNLTNTASVSVNALVKLAMSSATTTLTSPTA
Ga0137392_105920191	3300011269	Vadose Zone Soil	MVLGTAIGASQANAQCSGNAGTCNTTNTASVTVGALVKLG
Ga0137393_117095191	3300011271	Vadose Zone Soil	MVLGTAIGASQANAQCSGNAGTCNTTNTASVTVGALVKLGM
Ga0120153_10205241	3300011991	Permafrost	MRATRTLLAAMVLGTAIGASQANAQCSGSAGSCNTTNTASVTVGALVKLGMGTAVTAL
Ga0120167_11156901	3300012001	Permafrost	MSATRYLLAAMVLGSAISATQANAQCSGNAGGCLTVNTASATVNALVKLGMSGTTSTLSSPT
Ga0137383_100336951	3300012199	Vadose Zone Soil	MKATRFLLGAMVLGSAISVSQASAQCSGNAGGCLTVNTASATVNALVKLGM
Ga0137399_115612941	3300012203	Vadose Zone Soil	MRATRSLLAAMVLGTAIGASQANAQCSGNAGTCNTTNVASVTVGALVKLGMSSATTSLT
Ga0137381_107629422	3300012207	Vadose Zone Soil	MKATRYLLAAMVLGTAIGASQANAQCSGSAGSCNTTNTASVTVGALVKLG
Ga0137376_113334641	3300012208	Vadose Zone Soil	MRATRTLLAAMVLGTAIGASQANAQCSGNAGTCNTTNTASVTVGALVKLGMSSA
Ga0137370_103714582	3300012285	Vadose Zone Soil	MKATRVILAAMVLGTAVGASQANAQSCSGNAGTCNLTNTAQVIVPALVKLGM
Ga0137370_107674602	3300012285	Vadose Zone Soil	MKATRSLLAAMGLGTAIGATQANAQCSGNAGTCNTTNT
Ga0137360_103164734	3300012361	Vadose Zone Soil	MKATRFLLAAMVLGSAISVSQASAQCSGNAGGCLTVNTA
Ga0137413_105481822	3300012924	Vadose Zone Soil	MSATRYLLAAMVLGSAISATQANAQCSGNAGGCLTVNTASATVN
Ga0137416_102831451	3300012927	Vadose Zone Soil	MRATRSLLAAMVLGTAIGASQANAQCSGNAGTCNTTNVASVTVGAL
Ga0164300_108327951	3300012951	Soil	MKATRIILAAMVLGTAIGASQANAQSCQSSAGSCVTTNTASVTV
Ga0164300_111167961	3300012951	Soil	MNATRCILAAMVLGSAISVNQAGAQCSGNAGSCNTTNT
Ga0164299_108184001	3300012958	Soil	MKATRTLLAAMVLGTAITASQASAQCSGTGSCNTTNTAS
Ga0134077_103055802	3300012972	Grasslands Soil	MNATRSFLAAMVLGSAISVSQANAQCSGNAGGCLTVNTASATVNALVKLGMSAAA
Ga0120181_11017961	3300013766	Permafrost	MSKATRSLLAAMVLGTAISASHANAQSSCGGIGSCNMTNTASVAVG
Ga0134078_101726992	3300014157	Grasslands Soil	MKATRFLLAAMVLATAVGVTQAGAQCSGNAGSCNTTNTASVTVGNLVKLGMT
Ga0134078_106079461	3300014157	Grasslands Soil	MNATRTLLAAMVLVSAIGVNQAGAQCSGNAGGCLTVNTASATVNALVKLGM
Ga0184605_101479091	3300018027	Groundwater Sediment	MNATRFLLAAMVLGTAIGVEQANAQCSGNAGSCNTTNTASVS
Ga0184620_102051501	3300018051	Groundwater Sediment	MNATRFLAAMVLGTAICAAQANAQSCSGTGTCNLTNTA
Ga0184619_100082294	3300018061	Groundwater Sediment	MKATRLMAAMVLGTAIGASHANAQCSGNAGSCNTTNTASVTVGALVK
Ga0184619_103550281	3300018061	Groundwater Sediment	MNATRILLAAMVLGTAIGVEQANAQCSGNAGSCNTTNTASVSVNAL
Ga0184617_10753132	3300018066	Groundwater Sediment	MNATRFLLAAMVLGTAIGVEQVNAQCSGNAGSCNTTNTASVSVNALVKLGMSGVATSLTSPT
Ga0184618_101364892	3300018071	Groundwater Sediment	MTATRFLLAAMVLGTAIGVEQANAQCTGNAGSCNTTNTASVSVNALVKLGMGGTATT
Ga0184618_101744451	3300018071	Groundwater Sediment	MAAMLLGNAVAANHANAQCSGSGSCNTTNTASVSVNAVVKLGM
Ga0184618_104524341	3300018071	Groundwater Sediment	MNATRSLLAAMVLGTAIGATQANAQCSGNAGTCNTTNTASVTVGSLV
Ga0184629_104904191	3300018084	Groundwater Sediment	MNATRFLLAAMVLGTAIGVEQANAQCSGNAGSCNTTNTASVSVNALVKLGMSGVATSLTS
Ga0190272_109906082	3300018429	Soil	MNSTRFVLAAMVLGTALGSSQANAQGCIGIGSCTATNTASVSVGALVKLDMSSATT
Ga0066669_103502841	3300018482	Grasslands Soil	MNATRFLLAAMVLGSAISVTQADAQCSGNAGSCNTTNTASV
Ga0193748_10245591	3300019865	Soil	MKATRNLLAAMVLGTAISASQANAQCSGNAGTCNTTNTASVTVGALVKLGMSSAATALTN
Ga0193722_10413911	3300019877	Soil	MNATRFFMAVTVLASVLGANQANAQCSSNSGSCNTTNTASVTMNALVKLDMGSTTTSLTS
Ga0193722_10837471	3300019877	Soil	MSATRYLLAAMVLGSAISATQANAQCSGNAGGCLTVNTAS
Ga0193715_10892002	3300019878	Soil	MAAMVLGTAVAANHANAQCSGNSGSCNTTNTASVSVNAV
Ga0193692_10707341	3300020000	Soil	MRATRTLLAAMVLGTAICASQANAQCSGNAGTCNTTNTASVTVGALVKLGMSSAATAL
Ga0193734_10029913	3300020015	Soil	MRATRTLLAAMVLGTAIGASQANAQCSGNAGTCNTTNTA
Ga0193721_10948652	3300020018	Soil	MNATRFLLAAMVLGTAIGVEQVNAQCSGNAGSCNTTNTASVSVNALVKLGMSG
Ga0193733_10545562	3300020022	Soil	MSATRYLLAAMVLGSAISANQANAQCSGNAGGCLTVNTASATVNALVKLGMSGTTST
Ga0193745_10086101	3300020059	Soil	MNATRTLLAAMVLGTAIGATQANAQCSGNAGTCNTTNTAS
Ga0193745_10385592	3300020059	Soil	MNATRFLLAAMVLGTAIAGNQANAQCSGNAGSCFTTNTASV
Ga0206356_112179191	3300020070	Corn, Switchgrass And Miscanthus Rhizosphere	MKATRTILAAMVLGTVIGASQANAQCTGNAGTCNTTNTASVTVGALVKLGMSSA
Ga0210382_104793412	3300021080	Groundwater Sediment	MNATRFLLAAMVLGTAIGVEQANAQCSGNAGSCNTTNTASVSV
Ga0193694_10165822	3300021415	Soil	MRATRTLLAAMVLGTAISASQANAQCSGNAGTCNTTNTASVTVGALVK
Ga0213880_102291962	3300021953	Exposed Rock	MNATRFVLAAMVLGTAIGANQANAQCSGNAGSCNTTNTVS
Ga0193698_10133191	3300021968	Soil	MRATQYLLAAMVLGTTIVASQANAQCSGNGGTCNTTNTASVTVGALVKLGMSSAVTTLTN
Ga0224452_11121971	3300022534	Groundwater Sediment	MNATRTLLAAMVLGTAIGAVQANAQCSGNAGTCNTTNTASVTVGA
Ga0222622_100688411	3300022756	Groundwater Sediment	MKATRTLLAAMVLGTAIGAVQANAQCSGNAGTCNTTNTASVT
Ga0222622_101284524	3300022756	Groundwater Sediment	MNATRFLMAAMVLGTAIGVEANAQCSGNAGSCNTTNTASVSVNALVKLGMSG
Ga0247670_10789961	3300024283	Soil	MSATRYLLAAMVLGSAISATQANAQCSGNAGGCLTVNTASATVNALVKLGMSGTTTT
Ga0247668_11023792	3300024331	Soil	MSATRYLLAAMVLGSAISATQANAQCSGNAGGCLTVN
Ga0207929_10035923	3300025505	Arctic Peat Soil	MRATRTLLAAMVLGTAIGASQANAQCSNGAGTCTTTNTA
Ga0207654_111581531	3300025911	Corn Rhizosphere	MKATRTILAAMVLGTVIGASQANAQCTGNAGTCNT
Ga0207707_115604092	3300025912	Corn Rhizosphere	MNATRFILAAMVLGTAIGAEQANAQCSGNAGTCNTTNTASVTLGAVVKLGMSSAATSLTA
Ga0207660_108633782	3300025917	Corn Rhizosphere	MKATRSLLAAMVLATVGATTANAQCSGNAGSCNTTNT
Ga0207657_103794581	3300025919	Corn Rhizosphere	MKATNSLLAAIALVSAIGATQANAQCSGNAGSCNTTNTASVTVGTLVKLGMSSAT
Ga0207706_116113311	3300025933	Corn Rhizosphere	MKATRTLLAAMVLGTAIGASQASAQCSGNAGSCNTTNTASVTVGALVKLNELD
Ga0207686_114037702	3300025934	Miscanthus Rhizosphere	MNATRFILAAMVIGSAICVNQAEAQCSGNGSCNLTNTVSASVNNLVKLQMTSAT
Ga0207704_113462662	3300025938	Miscanthus Rhizosphere	MNATRFILAAMVLGSAISVNQASAQCSGNAGSCNTTNTVTASVNALVKLGMSSAATT
Ga0207704_113630541	3300025938	Miscanthus Rhizosphere	MKATRNLLAAMVLGTAICASQASAQCSGNAGSCNTTNTASVTVGALVKLGMSSA
Ga0207651_112954401	3300025960	Switchgrass Rhizosphere	MKATRTLLAAMVLVTAIGATSANAQCSGNAGTCNTTNTASVTVGALVKLGMSGT
Ga0207640_116456792	3300025981	Corn Rhizosphere	MNATRFLAAMVLGTAIGVNQANAQCSGNAGSCNSTNTVSATVNALVKLGMSAATTTLSSPTA
Ga0207658_118107601	3300025986	Switchgrass Rhizosphere	MNATRIILAAMVIGSAISVNQAGAQCSGNAGSCNSTNTASVTVNALVKLGMSSATTSLTS
Ga0207639_110536601	3300026041	Corn Rhizosphere	MKATRTILAALVLGTVIGASQANAQCTGNAGTCNTT
Ga0209840_10329771	3300026223	Soil	MRATRTLLAAMVLGTAIGASQANAQCSGSAGTCNTTN
Ga0209239_13592231	3300026310	Grasslands Soil	MNATRFILAAMVLGSAISVNQAGAQCSGNAGSCNTTNTASVSVNALVKLGMSSAAT
Ga0209472_12942471	3300026323	Soil	MKATRSLLAAMVLATAIGATEANAQCSGNAGSCNTTNTASVTVGALVKLGMSSATTTL
Ga0209056_107237691	3300026538	Soil	MNATRSFLAAMVLVFAISANQASAQCSGNAGGCLTVNTASATVNALVKLGMGATATTLSS
Ga0209331_11601592	3300027603	Forest Soil	MKATRLLLAAMVFGTVIGASQANAQGCSGANSCAGTN
Ga0209983_11337801	3300027665	Arabidopsis Thaliana Rhizosphere	MKATRNLLAAMVLGTIITASQANAQCSGNAGSCNTTNTASVTVGALVKLGMSAATTSLTSPTADD
Ga0307293_101616701	3300028711	Soil	MTATRFLLAAMVLGTAIGVEQANAQCSGNAGSCNTTNTAS
Ga0307293_101650451	3300028711	Soil	MNATRTLLAAMVLGTAIGAVQANAQCSGNAGTCNTTNTASVTVG
Ga0307313_100825322	3300028715	Soil	MNATRFLLAAMVLGTAIGVEQVNAQCSGNAGSCNTTNTASVSVNALVKLGMSGVATS
Ga0307282_101160222	3300028784	Soil	MRATRSLLAAMVLGTAIGASQANAQCSGNAGTCNTTNTASVTVGALVKLDMTT
Ga0307299_100422541	3300028793	Soil	MTATRFLLAAMVLGTAIGVEQANAQCSGNAGSCNTTNTASVSVNALVKLGMS
Ga0307284_102327082	3300028799	Soil	MRATRTLLAAMVLGTAIGASQANAQCSGNAGTCNT
Ga0307305_100706201	3300028807	Soil	MTATRFLLAAMVLGTAIGVEQANAQCSGNAGSCNTTN
Ga0307310_105478911	3300028824	Soil	MNATRFLMAAMVLGTAIGVEANAQCSGNAGSCNTTNTASVSVNALV
Ga0307312_100040558	3300028828	Soil	MNATRTLLAAMVLGTAIGAVQANAQCSGNAGTCNTTNTASVTVGALVK
Ga0307312_100912982	3300028828	Soil	MNATRFLLAAMVLGTAIGVEQANAQCSGNAGSCNTTNTASVSVNALVK
Ga0307312_101226852	3300028828	Soil	MKATRTLLAAMVLGTAIGAVQANAQCSGNAGTCNTTNTASVTVGALVK
Ga0307312_108102032	3300028828	Soil	MNATRFLLAAMVLGTAIGVEQVNAQCSGNAGSCNTTNTASVSVNALVKLGMSGVATSLTS
Ga0310813_102770401	3300031716	Soil	MFSSRLIAIALVVGSAVGAMPAMAQCSGSDSCSTTNTASVTVGALVNLEMSSAT
Ga0307469_102678091	3300031720	Hardwood Forest Soil	MNATRFILAAMVLGSAIGVNQASAQCSGNAGSCNTTNTVSASVNALVKLGMSTAAT
Ga0307469_114252182	3300031720	Hardwood Forest Soil	MNATRLILAAMVLGSAIGVNQASAQCSGNAGSCNTTNTASVSVNAL
Ga0307468_1021621701	3300031740	Hardwood Forest Soil	MNATRFVLAAMVFGAAISVNQAGAQCSGNAGSCNTTNTASVSV
Ga0307468_1024867961	3300031740	Hardwood Forest Soil	MKATRNLLAALVLGTVITASQANAQCSGNAGSCNTTNTASVTVG
Ga0307471_1005467431	3300032180	Hardwood Forest Soil	MRATRSLLAAMVLGTAIGASQANAQCSGNAGTCNTTNTASVTVGALVKLGMSSA
Ga0372946_0107643_2_157	3300034384	Soil	MKATRILLAAMVLGIVSASQANAQCSGNAGTCNTTNTASVTVGALVKLAMPT

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F051312

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences