Metagenome Family F051376

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F051376
Family Type	Metagenome
Number of Sequences	144
Average Sequence Length	65 residues
Representative Sequence	MVNTGTRARQIRALSGVAGHLASALDVLLLSGCDWFAADILEMLAVIDGQIAVLEEFGNEDSSS
Number of Associated Samples	99
Number of Associated Scaffolds	144

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	81.25 %
% of genes near scaffold ends (potentially truncated)	26.39 %
% of genes from short scaffolds (< 2000 bps)	79.17 %
Associated GOLD sequencing projects	87
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.73

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (79.167 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (40.972 % of family members)
Environment Ontology (ENVO)	Unclassified (49.306 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (61.111 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 65.22% β-sheet: 0.00% Coil/Unstructured: 34.78%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.73
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.73
Powered by PDBe Molstar

Structural matches with SCOPe domains

SCOP family	SCOP domain	Representative PDB	TM-score
a.266.1.0: automated matches	d2nw8a_	2nw8	0.89953
a.25.1.1: Ferritin	d3ka8a_	3ka8	0.89704
a.23.1.1: HSC20 (HSCB), C-terminal oligomerisation domain	d1fpoa2	1fpo	0.894
a.25.1.4: YciF-like	d2gyqa1	2gyq	0.88868
a.47.5.1: FlgN-like	d2fupa1	2fup	0.88614

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 144 Family Scaffolds
PF01266	DAO	8.33
PF11066	DUF2867	4.86
PF02515	CoA_transf_3	4.17
PF03061	4HBT	3.47
PF00496	SBP_bac_5	2.78
PF04392	ABC_sub_bind	2.78
PF01979	Amidohydro_1	2.78
PF04909	Amidohydro_2	2.78
PF01434	Peptidase_M41	2.08
PF08546	ApbA_C	2.08
PF13633	Obsolete Pfam Family	2.08
PF09118	GO-like_E_set	2.08
PF13458	Peripla_BP_6	1.39
PF03781	FGE-sulfatase	1.39
PF03476	MOSC_N	1.39
PF00296	Bac_luciferase	1.39
PF13686	DrsE_2	1.39
PF13147	Obsolete Pfam Family	1.39
PF13193	AMP-binding_C	1.39
PF00106	adh_short	0.69
PF01557	FAA_hydrolase	0.69
PF13561	adh_short_C2	0.69
PF00149	Metallophos	0.69
PF07578	LAB_N	0.69
PF04055	Radical_SAM	0.69
PF01569	PAP2	0.69
PF12399	BCA_ABC_TP_C	0.69
PF13565	HTH_32	0.69
PF08450	SGL	0.69
PF01694	Rhomboid	0.69
PF00378	ECH_1	0.69
PF01883	FeS_assembly_P	0.69
PF08538	DUF1749	0.69
PF07969	Amidohydro_3	0.69
PF01638	HxlR	0.69
PF01894	UPF0047	0.69
PF13416	SBP_bac_8	0.69
PF07589	PEP-CTERM	0.69
PF08592	Anthrone_oxy	0.69
PF00753	Lactamase_B	0.69
PF12697	Abhydrolase_6	0.69
PF02719	Polysacc_synt_2	0.69
PF13557	Phenol_MetA_deg	0.69
PF07963	N_methyl	0.69
PF00216	Bac_DNA_binding	0.69
PF10518	TAT_signal	0.69
PF02653	BPD_transp_2	0.69

COG ID	Name	Functional Category	% Frequency in 144 Family Scaffolds
COG1804	Crotonobetainyl-CoA:carnitine CoA-transferase CaiB and related acyl-CoA transferases	Lipid transport and metabolism [I]	4.17
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	2.78
COG0465	ATP-dependent Zn proteases	Posttranslational modification, protein turnover, chaperones [O]	2.08
COG1893	Ketopantoate reductase	Coenzyme transport and metabolism [H]	2.08
COG0451	Nucleoside-diphosphate-sugar epimerase	Cell wall/membrane/envelope biogenesis [M]	1.39
COG0702	Uncharacterized conserved protein YbjT, contains NAD(P)-binding and DUF2867 domains	General function prediction only [R]	1.39
COG1086	NDP-sugar epimerase, includes UDP-GlcNAc-inverting 4,6-dehydratase FlaA1 and capsular polysaccharide biosynthesis protein EpsC	Cell wall/membrane/envelope biogenesis [M]	1.39
COG1262	Formylglycine-generating enzyme, required for sulfatase activity, contains SUMF1/FGE domain	Posttranslational modification, protein turnover, chaperones [O]	1.39
COG2141	Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)	Coenzyme transport and metabolism [H]	1.39
COG3217	N-hydroxylaminopurine reductase subunit YcbX, contains MOSC domain	Defense mechanisms [V]	1.39
COG0432	Thiamin phosphate synthase YjbQ, UPF0047 family	Coenzyme transport and metabolism [H]	0.69
COG0705	Membrane-associated serine protease, rhomboid family	Posttranslational modification, protein turnover, chaperones [O]	0.69
COG0776	Bacterial nucleoid DNA-binding protein IHF-alpha	Replication, recombination and repair [L]	0.69
COG1087	UDP-glucose 4-epimerase	Cell wall/membrane/envelope biogenesis [M]	0.69
COG1088	dTDP-D-glucose 4,6-dehydratase	Cell wall/membrane/envelope biogenesis [M]	0.69
COG1089	GDP-D-mannose dehydratase	Cell wall/membrane/envelope biogenesis [M]	0.69
COG1091	dTDP-4-dehydrorhamnose reductase	Cell wall/membrane/envelope biogenesis [M]	0.69
COG1733	DNA-binding transcriptional regulator, HxlR family	Transcription [K]	0.69
COG3386	Sugar lactone lactonase YvrE	Carbohydrate transport and metabolism [G]	0.69
COG3391	DNA-binding beta-propeller fold protein YncE	General function prediction only [R]	0.69
COG3952	Uncharacterized N-terminal domain of lipid-A-disaccharide synthase	General function prediction only [R]	0.69

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	79.17 %
Unclassified	root	N/A	20.83 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	79.17 %
Unclassified	root	N/A	20.83 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	79.17 %
Unclassified	root	N/A	20.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	20.83 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	20.14 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	13.19 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2.78 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.69 %
Nitrospirae	phylum	All Organisms → cellular organisms → Bacteria → Nitrospirae	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	20.83 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	20.14 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4.86 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2.78 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.69 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.69 %
Nitrospira	class	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira	0.69 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	20.83 %
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	20.14 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2.08 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1.39 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1.39 %
unclassified Actinobacteria	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria	0.69 %
unclassified Planctomycetota	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota	0.69 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.69 %
unclassified Betaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria	0.69 %
Nitrospirales	order	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	20.83 %
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	11.81 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	2.08 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1.39 %
Actinobacteria bacterium 13_1_40CM_4_65_12	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_40CM_4_65_12	0.69 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.69 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	0.69 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.69 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	0.69 %
Nitrospiraceae	family	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	20.83 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	11.81 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2.08 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1.39 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.69 %
Nitrospira	genus	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira	0.69 %
Olavius algarvensis associated proteobacterium Delta 3	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Olavius algarvensis associated proteobacterium Delta 3	0.69 %
Actinobacteria bacterium 13_1_40CM_4_65_12	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_40CM_4_65_12	0.69 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.69 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	0.69 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2035918004\|FACENC_F56XM5W01DMXQ4	Not Available	509	Open in IMG/M
2088090014\|GPIPI_16970579	All Organisms → cellular organisms → Bacteria	3279	Open in IMG/M
2088090014\|GPIPI_17275670	All Organisms → cellular organisms → Bacteria	1095	Open in IMG/M
3300000443\|F12B_10375433	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1431	Open in IMG/M
3300002562\|JGI25382J37095_10048375	All Organisms → cellular organisms → Bacteria	1641	Open in IMG/M
3300004479\|Ga0062595_100619132	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	848	Open in IMG/M
3300005171\|Ga0066677_10219627	All Organisms → cellular organisms → Bacteria	1070	Open in IMG/M
3300005172\|Ga0066683_10194103	All Organisms → cellular organisms → Bacteria	1253	Open in IMG/M
3300005172\|Ga0066683_10419772	All Organisms → cellular organisms → Bacteria	824	Open in IMG/M
3300005176\|Ga0066679_10021569	All Organisms → cellular organisms → Bacteria → Proteobacteria	3421	Open in IMG/M
3300005177\|Ga0066690_10821406	All Organisms → cellular organisms → Bacteria	602	Open in IMG/M
3300005180\|Ga0066685_10610861	All Organisms → cellular organisms → Bacteria	750	Open in IMG/M
3300005332\|Ga0066388_104563252	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	705	Open in IMG/M
3300005441\|Ga0070700_101395222	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	592	Open in IMG/M
3300005444\|Ga0070694_100728769	All Organisms → cellular organisms → Bacteria	808	Open in IMG/M
3300005445\|Ga0070708_100048542	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	3752	Open in IMG/M
3300005446\|Ga0066686_10215966	All Organisms → cellular organisms → Bacteria	1288	Open in IMG/M
3300005467\|Ga0070706_100032095	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	4844	Open in IMG/M
3300005468\|Ga0070707_100051599	All Organisms → cellular organisms → Bacteria → Proteobacteria	3943	Open in IMG/M
3300005468\|Ga0070707_100536081	Not Available	1133	Open in IMG/M
3300005471\|Ga0070698_100976932	All Organisms → cellular organisms → Bacteria	794	Open in IMG/M
3300005545\|Ga0070695_101692846	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	529	Open in IMG/M
3300005556\|Ga0066707_10423554	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	865	Open in IMG/M
3300005558\|Ga0066698_10257128	All Organisms → cellular organisms → Bacteria	1206	Open in IMG/M
3300005561\|Ga0066699_10008981	All Organisms → cellular organisms → Bacteria	4818	Open in IMG/M
3300005718\|Ga0068866_11271139	Not Available	534	Open in IMG/M
3300006173\|Ga0070716_101744054	Not Available	514	Open in IMG/M
3300006794\|Ga0066658_10849821	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	520	Open in IMG/M
3300006796\|Ga0066665_10969391	Not Available	654	Open in IMG/M
3300006796\|Ga0066665_11193393	All Organisms → cellular organisms → Bacteria	580	Open in IMG/M
3300006796\|Ga0066665_11255681	Not Available	567	Open in IMG/M
3300006854\|Ga0075425_100812409	Not Available	1071	Open in IMG/M
3300006854\|Ga0075425_101344394	All Organisms → cellular organisms → Bacteria	809	Open in IMG/M
3300006871\|Ga0075434_101119741	All Organisms → cellular organisms → Bacteria	800	Open in IMG/M
3300009012\|Ga0066710_100401248	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2044	Open in IMG/M
3300009038\|Ga0099829_10007712	All Organisms → cellular organisms → Bacteria → Proteobacteria	6757	Open in IMG/M
3300009038\|Ga0099829_10017436	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4850	Open in IMG/M
3300009038\|Ga0099829_10060934	All Organisms → cellular organisms → Bacteria	2830	Open in IMG/M
3300009038\|Ga0099829_10159770	All Organisms → cellular organisms → Bacteria	1804	Open in IMG/M
3300009038\|Ga0099829_10177451	All Organisms → cellular organisms → Bacteria	1713	Open in IMG/M
3300009038\|Ga0099829_10683722	All Organisms → cellular organisms → Bacteria	853	Open in IMG/M
3300009038\|Ga0099829_10775923	All Organisms → cellular organisms → Bacteria	796	Open in IMG/M
3300009038\|Ga0099829_11379959	Not Available	582	Open in IMG/M
3300009038\|Ga0099829_11793539	Not Available	502	Open in IMG/M
3300009089\|Ga0099828_10482800	Not Available	1118	Open in IMG/M
3300009089\|Ga0099828_10485098	Not Available	1115	Open in IMG/M
3300009089\|Ga0099828_10654269	All Organisms → cellular organisms → Bacteria	945	Open in IMG/M
3300009089\|Ga0099828_11391022	Not Available	620	Open in IMG/M
3300009090\|Ga0099827_10382502	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1201	Open in IMG/M
3300009090\|Ga0099827_10605774	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	945	Open in IMG/M
3300009090\|Ga0099827_10768706	All Organisms → cellular organisms → Bacteria	833	Open in IMG/M
3300009090\|Ga0099827_11546113	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	578	Open in IMG/M
3300009837\|Ga0105058_1195354	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	504	Open in IMG/M
3300010046\|Ga0126384_10043286	All Organisms → cellular organisms → Bacteria	3061	Open in IMG/M
3300010358\|Ga0126370_10030644	All Organisms → cellular organisms → Bacteria	3233	Open in IMG/M
3300010359\|Ga0126376_11096611	Not Available	804	Open in IMG/M
3300010361\|Ga0126378_13359496	Not Available	508	Open in IMG/M
3300010391\|Ga0136847_12010388	All Organisms → cellular organisms → Bacteria	2122	Open in IMG/M
3300010398\|Ga0126383_12919021	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	558	Open in IMG/M
3300011269\|Ga0137392_10315533	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1293	Open in IMG/M
3300011269\|Ga0137392_10412178	All Organisms → cellular organisms → Bacteria	1122	Open in IMG/M
3300011270\|Ga0137391_10251346	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1532	Open in IMG/M
3300011270\|Ga0137391_10324247	All Organisms → cellular organisms → Bacteria → Proteobacteria	1326	Open in IMG/M
3300011271\|Ga0137393_10007926	All Organisms → cellular organisms → Bacteria	7145	Open in IMG/M
3300012096\|Ga0137389_10388197	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1191	Open in IMG/M
3300012189\|Ga0137388_11981662	Not Available	511	Open in IMG/M
3300012199\|Ga0137383_10243271	All Organisms → cellular organisms → Bacteria	1319	Open in IMG/M
3300012202\|Ga0137363_10008854	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	6366	Open in IMG/M
3300012203\|Ga0137399_11549773	Not Available	550	Open in IMG/M
3300012204\|Ga0137374_10033494	All Organisms → cellular organisms → Bacteria	5571	Open in IMG/M
3300012204\|Ga0137374_10271525	All Organisms → cellular organisms → Bacteria	1408	Open in IMG/M
3300012351\|Ga0137386_10498177	All Organisms → cellular organisms → Bacteria	877	Open in IMG/M
3300012353\|Ga0137367_10135129	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Olavius algarvensis associated proteobacterium Delta 3	1805	Open in IMG/M
3300012353\|Ga0137367_10847462	All Organisms → cellular organisms → Bacteria	632	Open in IMG/M
3300012355\|Ga0137369_10040508	All Organisms → cellular organisms → Bacteria	4173	Open in IMG/M
3300012356\|Ga0137371_10321189	Not Available	1205	Open in IMG/M
3300012359\|Ga0137385_10368736	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1227	Open in IMG/M
3300012361\|Ga0137360_10265612	All Organisms → cellular organisms → Bacteria → Proteobacteria	1414	Open in IMG/M
3300012362\|Ga0137361_11661921	Not Available	559	Open in IMG/M
3300012363\|Ga0137390_10011587	All Organisms → cellular organisms → Bacteria	7852	Open in IMG/M
3300012363\|Ga0137390_10348658	All Organisms → cellular organisms → Bacteria	1461	Open in IMG/M
3300012363\|Ga0137390_11839152	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	536	Open in IMG/M
3300012509\|Ga0157334_1009755	All Organisms → cellular organisms → Bacteria	884	Open in IMG/M
3300012532\|Ga0137373_10449493	Not Available	992	Open in IMG/M
3300012923\|Ga0137359_10190941	All Organisms → cellular organisms → Bacteria	1829	Open in IMG/M
3300012927\|Ga0137416_10896648	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	788	Open in IMG/M
3300012929\|Ga0137404_10307887	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1376	Open in IMG/M
3300012929\|Ga0137404_11524487	All Organisms → cellular organisms → Bacteria	619	Open in IMG/M
3300012929\|Ga0137404_12139166	Not Available	523	Open in IMG/M
3300012931\|Ga0153915_11096446	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	929	Open in IMG/M
3300012931\|Ga0153915_11591837	Not Available	764	Open in IMG/M
3300012964\|Ga0153916_10015919	All Organisms → cellular organisms → Bacteria	6214	Open in IMG/M
3300012976\|Ga0134076_10331732	All Organisms → cellular organisms → Bacteria	665	Open in IMG/M
3300013306\|Ga0163162_10495004	All Organisms → cellular organisms → Bacteria	1353	Open in IMG/M
3300013308\|Ga0157375_11450077	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_40CM_4_65_12	809	Open in IMG/M
3300014269\|Ga0075302_1157343	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	555	Open in IMG/M
3300015053\|Ga0137405_1067483	All Organisms → cellular organisms → Bacteria	1100	Open in IMG/M
3300015264\|Ga0137403_10680700	All Organisms → cellular organisms → Bacteria	889	Open in IMG/M
3300015371\|Ga0132258_10590310	All Organisms → cellular organisms → Bacteria	2788	Open in IMG/M
3300015372\|Ga0132256_100060913	All Organisms → cellular organisms → Bacteria	3542	Open in IMG/M
3300015373\|Ga0132257_100193454	All Organisms → cellular organisms → Bacteria	2406	Open in IMG/M
3300015374\|Ga0132255_100265774	All Organisms → cellular organisms → Bacteria → Proteobacteria	2457	Open in IMG/M
3300015374\|Ga0132255_100615814	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1606	Open in IMG/M
3300017659\|Ga0134083_10495610	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	546	Open in IMG/M
3300018431\|Ga0066655_10142539	All Organisms → cellular organisms → Bacteria	1411	Open in IMG/M
3300018468\|Ga0066662_10007077	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	5608	Open in IMG/M
3300018468\|Ga0066662_12934100	Not Available	506	Open in IMG/M
3300018482\|Ga0066669_11988550	All Organisms → cellular organisms → Bacteria	544	Open in IMG/M
3300024310\|Ga0247681_1045873	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	666	Open in IMG/M
3300025910\|Ga0207684_10020052	All Organisms → cellular organisms → Bacteria	5713	Open in IMG/M
3300025910\|Ga0207684_10044671	All Organisms → cellular organisms → Bacteria	3758	Open in IMG/M
3300025910\|Ga0207684_10303009	All Organisms → cellular organisms → Bacteria	1378	Open in IMG/M
3300025922\|Ga0207646_10078030	All Organisms → cellular organisms → Bacteria	2960	Open in IMG/M
3300025922\|Ga0207646_10454718	Not Available	1155	Open in IMG/M
3300025922\|Ga0207646_10619740	All Organisms → cellular organisms → Bacteria	970	Open in IMG/M
3300025939\|Ga0207665_11428673	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	550	Open in IMG/M
3300026089\|Ga0207648_12050391	Not Available	533	Open in IMG/M
3300026296\|Ga0209235_1066457	All Organisms → cellular organisms → Bacteria → Proteobacteria	1661	Open in IMG/M
3300026297\|Ga0209237_1019754	All Organisms → cellular organisms → Bacteria → Proteobacteria	3861	Open in IMG/M
3300026318\|Ga0209471_1336523	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	500	Open in IMG/M
3300026335\|Ga0209804_1276327	All Organisms → cellular organisms → Bacteria	589	Open in IMG/M
3300026343\|Ga0209159_1186013	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	711	Open in IMG/M
3300026498\|Ga0257156_1028756	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1122	Open in IMG/M
3300026532\|Ga0209160_1100250	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1469	Open in IMG/M
3300027846\|Ga0209180_10017628	All Organisms → cellular organisms → Bacteria → Proteobacteria	3751	Open in IMG/M
3300027846\|Ga0209180_10029464	All Organisms → cellular organisms → Bacteria	2951	Open in IMG/M
3300027846\|Ga0209180_10199211	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira	1155	Open in IMG/M
3300027846\|Ga0209180_10541753	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	648	Open in IMG/M
3300027862\|Ga0209701_10169372	All Organisms → cellular organisms → Bacteria → Proteobacteria	1321	Open in IMG/M
3300027862\|Ga0209701_10181585	All Organisms → cellular organisms → Bacteria	1266	Open in IMG/M
3300027875\|Ga0209283_10822614	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	569	Open in IMG/M
3300027875\|Ga0209283_10823716	Not Available	568	Open in IMG/M
3300027882\|Ga0209590_10220095	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1205	Open in IMG/M
3300027882\|Ga0209590_11033324	Not Available	511	Open in IMG/M
3300028536\|Ga0137415_10749490	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	788	Open in IMG/M
3300028792\|Ga0307504_10042874	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1259	Open in IMG/M
(restricted) 3300031248\|Ga0255312_1021948	All Organisms → cellular organisms → Bacteria	1525	Open in IMG/M
3300031740\|Ga0307468_100392040	All Organisms → cellular organisms → Bacteria	1056	Open in IMG/M
3300031740\|Ga0307468_100501493	Not Available	962	Open in IMG/M
3300031740\|Ga0307468_100788708	Not Available	808	Open in IMG/M
3300032180\|Ga0307471_100367293	Not Available	1555	Open in IMG/M
3300032180\|Ga0307471_100728531	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1157	Open in IMG/M
3300032205\|Ga0307472_100614803	All Organisms → cellular organisms → Bacteria	962	Open in IMG/M
3300032205\|Ga0307472_102502661	Not Available	525	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	91.67%
Host-Associated	Host-Associated	8.33%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	88.89%
Plants	Host-Associated → Plants	8.33%
Aquatic	Environmental → Aquatic	2.78%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	88.89%
Rhizoplane	Host-Associated → Plants → Rhizoplane	4.86%
Rhizosphere	Host-Associated → Plants → Rhizosphere	3.47%
Freshwater	Environmental → Aquatic → Freshwater	2.78%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	73.61%
Loam	Environmental → Terrestrial → Soil → Loam	13.19%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.78%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.78%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	2.08%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.08%
Sand	Environmental → Terrestrial → Soil → Sand	1.39%
Lake	Environmental → Aquatic → Freshwater → Lake	0.69%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.69%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.69%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	47.92%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	18.75%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	11.11%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	6.25%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.78%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.78%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	2.08%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.08%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.39%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	1.39%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	0.69%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.69%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.69%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.69%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.69%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	40.97%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	13.19%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	11.11%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	5.56%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	4.86%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	3.47%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	2.78%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	2.08%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.08%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.39%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.39%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.39%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.39%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.39%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Freshwater Sediment	0.69%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.69%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.69%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	0.69%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.69%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	0.69%
Sandy Soil	Environmental → Terrestrial → Soil → Sand → Unclassified → Sandy Soil	0.69%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.69%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.69%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.69%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2035918004	Soil microbial communities from sample at FACE Site 2 North Carolina CO2-	Environmental	Open in IMG/M
2088090014	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000443	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.2B clc assemly	Environmental	Open in IMG/M
3300002562	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005718	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2	Host-Associated	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006794	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009837	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_20_30	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010391	Freshwater sediment microbial communities from Lake Superior, USA - Station SU-17. Combined Assembly of Gp0155404, Gp0155335, Gp0155336, Gp0155336, Gp0155403, Gp0155406	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012509	Unplanted soil (control) microbial communities from North Carolina - M.Soil.8.old.080610_6	Environmental	Open in IMG/M
3300012532	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012931	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 3 metaG	Environmental	Open in IMG/M
3300012964	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 4 metaG	Environmental	Open in IMG/M
3300012976	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_0_1 metaG	Environmental	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014269	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleB_D1	Environmental	Open in IMG/M
3300015053	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017659	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300024310	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK22	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026296	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026297	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026318	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128 (SPAdes)	Environmental	Open in IMG/M
3300026335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139 (SPAdes)	Environmental	Open in IMG/M
3300026343	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144 (SPAdes)	Environmental	Open in IMG/M
3300026498	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-49-A	Environmental	Open in IMG/M
3300026532	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153 (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027862	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300028792	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 19_S	Environmental	Open in IMG/M
3300031248 (restricted)	Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - EtOH5_T0_E5	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
FACENCA_3425060	2035918004	Soil	MLNTGTRAQEIRVLSGVAGHLASALDVLLLSEYDRFVADILEMLAVIDGQIAVLEEFPSEGFS
GPIPI_03411450	2088090014	Soil	MLNTGTRAQEIRVLSGVAGHLASALDVLLLSEYDRFVVDILEMLAVIDGQIAVLEEFPSEGFS
GPIPI_03591900	2088090014	Soil	MLXIGTRAHEIRILSGVAGHLASALEVLLLSEYDRFVGDILEILAVIDGQIAVLEEFRNEEFS
F12B_103754333	3300000443	Soil	MLNTGTRAQEIRVLSGVAGHLASALDVLLLSEYDRFVADILEMLAAIDGQIAVLEEFPSEGSS*
JGI25382J37095_100483752	3300002562	Grasslands Soil	MLDAGTRAHQIRALSGVAGYLCSALDVLRINGCDWFTADILEMLAAIDGQIAVLKELGNESPSSSF*
Ga0062595_1006191322	3300004479	Soil	MLNIGTRAHEIRILSGVAGHLASALEVLLLSEYDRFVGDILEILAVIDGQIAVLEEFRNEEFS*
Ga0066677_102196272	3300005171	Soil	MGNTGTRAREIRALAGPAGHLASALDVLLLSGCDWFTGDILEMLAVINEQIAVLEEFGHEDSSSSLST*
Ga0066683_101941033	3300005172	Soil	MLDTGRHAHQIRALSGVAGYLCSALDVLALNGCDWFTTDILEMLAAIDGQIAVLKELGNESSS*
Ga0066683_104197722	3300005172	Soil	MLNIGTRAHEIRVLSGVAGHLASALDVLLRSECDRFVADILEMLAVIDGQIAVLEEFRNEEFS*
Ga0066679_100215696	3300005176	Soil	MVNTGTRAREIRALSGVAAHLTSALDVLLLSGCDWFVADILEMLAVIDGQIAVQEELGNEDSS*
Ga0066690_108214062	3300005177	Soil	MGNTGTRAREIRALAGAAGHLASALDVLLLSGCDWFTGDILEMLAVINEQIAVLEEFGHEDSSSSLST*
Ga0066685_106108613	3300005180	Soil	MLDTGRHAHQIRALSGVAGYLCSALDVLALNGCDWFTTDILEMLAAIDGQIAVLKKLGNESSS*
Ga0066388_1045632521	3300005332	Tropical Forest Soil	MLCSDTHADQIRVLSGIAAHLVSARDMLVLSGCNWFTAEILEMLAVIDGQIAVLEALGSEDSSPRLGA*
Ga0070700_1013952221	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	MLNTGTRAQEIRVLSGVAGHLASALDVLLLSEYDRFVADILEMLAVIDGQIAV
Ga0070694_1007287691	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	MFDTGRRAQEIRALSGVAGHLASALDVLLVSECDWFVADILEILAVIDGQIAVLEEFGNEESS*
Ga0070708_1000485422	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MGNTGTRAREIRALAGVAGHLASALDVLLLSGCDWFVCDILEMLAVINEQIAVLEEFGHEDSSSSLST*
Ga0066686_102159663	3300005446	Soil	MLNIGTRAHEIRVLSGVAGHLASALDVLLRSECDRFVADILDMLAVIDGQIAVLEEFRNEEFS*
Ga0070706_1000320952	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MGNTGTRAREIRALAGVAGHLASALDVLLLSGCDWFVCDILEMLAVINEQIAVLEEFGREDSSSSLST*
Ga0070707_1000515992	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MGNIGTRAREIRALAGVAGHLASALDALLLSECDWFVADILEMLAVIDGQIAALEEFGSEESS*
Ga0070707_1005360812	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MVNPGTRAREIRALSGVAGHLASALDVLLLSGCDWFAADILEMLAIIDGQIAVLEEFGNEDSSSSLGV*
Ga0070698_1009769321	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MGNTGTRAREIRALASVAGHLTSALDVLLLSGCDWFVCDILEMLAVINEQIAV
Ga0070695_1016928461	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	MLNTGTRAQEIRVLSGVAGHLDSALDVLLLSEYDRFVADILEMLAVIDGQIAVLEEFPSEGFS*
Ga0066707_104235542	3300005556	Soil	MVNTGTRAREIRALSGVAAHLASALDVLLLSGCDWFVADILEMLAVIDGQLAVLEEFGNEDSSS
Ga0066698_102571282	3300005558	Soil	MLDTGRHAHQIRALSGVAGYLCSVLDVLALNGCDWFTTDILEMLAAIDGQIAVLKELGNESSS*
Ga0066699_100089816	3300005561	Soil	MGNTGTRAREIRALAGAAGHLASALDVLLLSGCDWFTGDILEMLAVINEQIAVLEELGHEDSSSSLST*
Ga0068866_112711391	3300005718	Miscanthus Rhizosphere	MLNTGTRAQEIRVLSGVAGHLASALDVLLLSEYDRFVADILEMLAVIDGQIAVLEEFPSEGFS*
Ga0070716_1017440542	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	PRAMLNTGTRAQEIRVLSGVAGHLASALDVLLLSEYDRFVADILEMLAVIDGQIAVLEEFPSEGFS*
Ga0066658_108498212	3300006794	Soil	MVNTGTRAREIRALSGVAAHLTSALDVLLLSGCDWFVADILEMLAVIDGQIAVQEDLYLVSARADTTIHPLK*
Ga0066665_109693912	3300006796	Soil	MVNTGTRAREIRALSGVAAHLTSALDVLLLSGCDWFVADILEMLAVIDGQIAVQEDLYLVSARADTTIRH*
Ga0066665_111933931	3300006796	Soil	MGNTGTRAREIRALAGAAGHLASALDVLLLSGCDWFTGDILEMLAVINEQIAVLEEFGHEDSSS
Ga0066665_112556811	3300006796	Soil	SRMVNAGTCAREIRALSGVAGHLASALDVLLLSGCDWFAADEMLAVIDGQIAVLQEFGNEDSSSSLGV*
Ga0075425_1008124091	3300006854	Populus Rhizosphere	MFDTGRRAQEIRALSGVAGHLASALDVLLVSECDWFVADILEMLAVIDGQIAVLEEFGNEESS*
Ga0075425_1013443942	3300006854	Populus Rhizosphere	MLNIGTRAHEIRILSGVAGHLASALEVLLLSEYDRFVGDILEMLAVIDGQIAVLEEFRNEEFS*
Ga0075434_1011197412	3300006871	Populus Rhizosphere	MLNIGTRAHEIRVLSGVAGHLASALEVLLLSEYDRFVGDILEMLAVIDGQIAVLEEFRNEEFS*
Ga0066710_1004012485	3300009012	Grasslands Soil	MVNAGTCAREIRALSGVAGHLASALDVLLLSGCDWFAADEMLAVIDGQIAVLQEFGNEDSSSSLGV
Ga0099829_100077122	3300009038	Vadose Zone Soil	MGNTGTRAREIRALAGVAGHLASALDVLLLSGCDWFVCDILEMLAVINEQIAVLEEFGREDFSSSLST*
Ga0099829_100174364	3300009038	Vadose Zone Soil	MFDTGRRAQEIRALSGVAGHLASALDVLLVSECNWFVADILEMLSVIDGQIEVLEEFSDEESS*
Ga0099829_100609342	3300009038	Vadose Zone Soil	MVNAGTRAREIRALSGVAGHLASALDVLLPSGCDWFAADEMLAVIDGQIAVLEEFGNEDSSSSLGV*
Ga0099829_101597702	3300009038	Vadose Zone Soil	MVNTGTRARQIRALSGVAGHLASALDVLLLSGCDWFAADILEMLAVIDGQIAVLEEFGNEDSSSSLGV*
Ga0099829_101774512	3300009038	Vadose Zone Soil	MGNTSTRAYDICALAGVAGHLASALDVLLLSGCDWFTADILEMLAVIDGQIAVLEEFGNEDSSSSLGV*
Ga0099829_106837222	3300009038	Vadose Zone Soil	MLDTGTRARQIRALSGVAGHLASALDVLLLSGCDWFTADILEMLAVIDGQIAVLEELGSEDSSSSLGG*
Ga0099829_107759232	3300009038	Vadose Zone Soil	MLDTGTRAHQIRTLSRVAGHLASALDVLSLSGCNWFSADILEMLAVIDGHIALLEALGNEGTSSSLGA*
Ga0099829_113799591	3300009038	Vadose Zone Soil	MGNTGTRARQVHALSGVAGHLASALDELLLSGCDWFAADILEMLAVIDGQIAILEESSDEDSSSSLGE*
Ga0099829_117935392	3300009038	Vadose Zone Soil	MVNTGTHAREIRALSGVAGHLASALDVLLLSGCEWFVADILELLAVIDGQIAVLEEL*
Ga0099828_104828001	3300009089	Vadose Zone Soil	MINTGTRAREIRALSGVAGHLASALDVLLLSGCDWFAADILEMLAVIDGQIAVLEEFSNE
Ga0099828_104850981	3300009089	Vadose Zone Soil	MGNTGTRAREIRALAGVAGHLASALDVLLLSGCDWFVCDILEMLAVINEQIAVLEEFGREDFSSSLSP*
Ga0099828_106542692	3300009089	Vadose Zone Soil	MLDTGTRAYQIRALSGVAGHLASALDVLLLSGCDWFTADILEMLAVIDGQIAVLEELGSEDSSSSLGG*
Ga0099828_113910221	3300009089	Vadose Zone Soil	MGNTGTRARQVHALSGVAGHLASALDVLLLSGCDWFAADILEMLAVIDGQIAILEESGNEDSSSSLGV*
Ga0099827_103825021	3300009090	Vadose Zone Soil	MLDTGTRARQIRALSGVAGHLASALDVLLLSGCDWLTADILEMLAVIDGQIAVLEGLG
Ga0099827_106057742	3300009090	Vadose Zone Soil	MFDTGGRAQEIRTLSGVAGHLASALDVLLVSECDWFVADIVEMLAVIDGQIAVLEEIGNGESS*
Ga0099827_107687062	3300009090	Vadose Zone Soil	MGNTDTRAREIRALAGVAGHLASALDALLLSGCDWFTGDILEMLAVINEQIAAVEEFDREDSSSSLST*
Ga0099827_115461132	3300009090	Vadose Zone Soil	MVNTGTRAREIRALSGVAAHLASALDVLLLSGCDWFVADILEMLAVIDGQIAVLEELGNEDSS*
Ga0105058_11953542	3300009837	Groundwater Sand	GTHAPQIRALSGVAGHLASALDVLLRSGCDWFTDDILEMLAVIDGQIAVLEEFGNEDSSSSLGV*
Ga0126384_100432862	3300010046	Tropical Forest Soil	MFDAGGRAQEIRVLSGVAGHLASALDVLLVSECDWFVADILEMLAVIDGQIAVLEEFGSEESP*
Ga0126370_100306444	3300010358	Tropical Forest Soil	MFDAGGRAQEIRVLSGVAGHLASALDVLLVSECDWFVADILEMLTVIDGQIAVLEEFGSEESP*
Ga0126376_110966111	3300010359	Tropical Forest Soil	MLCSDTHADQIRVLSGIAAHLVSARDMLVLSGCTWFTAEILEMLAVIDGQIAVLEALGSEDSSPRLGA*
Ga0126378_133594961	3300010361	Tropical Forest Soil	MLCSDTHADQIRVLSGIAAHLVSARDMLVLSGCTWFTAEILEMLAVIDGQIAVLEALGSEDSSPRLG
Ga0136847_120103883	3300010391	Freshwater Sediment	MLDTGSRAHQIRALFGVAGHLASALEVLSLSGYDWFSADILEMLAVIDRQILLLEELGNESSSSSPGV*
Ga0126383_129190211	3300010398	Tropical Forest Soil	MFDTGRRAQEIRVLSGVAGHLASALDVLLVSECDWFVADILEMLAVIDGQIAVLEEFGSEESP*
Ga0137392_103155333	3300011269	Vadose Zone Soil	MVNAGTRAREIRALSGVAGHLASALDVLLPSGCDWFAADEMLAVIDGQIAVLE
Ga0137392_104121782	3300011269	Vadose Zone Soil	MGNTGTRAREIRALAGVAGHLASALDVLLLSGCDWFVCDILEMLAVINEQIAVLEEFGREDSSSSLSP*
Ga0137391_102513462	3300011270	Vadose Zone Soil	MVNTGTRARQIRALSGVAGHLASALDVLLLSGCDWFAADILEMLAVIDGQIAVLEEFGNKDSASSLGV*
Ga0137391_103242472	3300011270	Vadose Zone Soil	MVNTGTHAREIRALSGVAGHLASALDVLLLSGCEWFVADILELLAVIDGQIAVLEELGNEDSSSSLGV*
Ga0137393_100079262	3300011271	Vadose Zone Soil	MVNTGTRARQIRALSGVAGHLASALDVLLLSGCDWFAADILEMLAVIDGQIAVLEEFGNEDSASSLGV*
Ga0137389_103881971	3300012096	Vadose Zone Soil	MVNAGTRAREIRALSGVAGHLASALDVLLLSGCDWFTADILEMLAVIDGQIAVLEEPGSEDSSSSLGG*
Ga0137388_119816621	3300012189	Vadose Zone Soil	MGNTGTRARQVHALSGVAGHLASALDELLLSGCDWFAADILEMLAVIDGQIAILEESGNEDSSSSLGV*
Ga0137383_102432713	3300012199	Vadose Zone Soil	MVNIGTRAREIRALSGVAGHLASALDVLLLSGCDRFAADILELLALIDGQIAVLEEFGNRDFS*
Ga0137363_100088543	3300012202	Vadose Zone Soil	MVNTGTHAREIRALSGVAGHLASALDVLLLSGCEWFVADILELLAVIDGQIAVLEEFGSDGFS*
Ga0137399_115497731	3300012203	Vadose Zone Soil	MVNTGTRAREIRALSRAAAHLASALDVLLLSGCDWFVADILEMLAVIDGQIAVLDELGNEDSSSSLGV*
Ga0137374_100334943	3300012204	Vadose Zone Soil	MVGSGMRARELRALSGVAGHLASALDVLLLSGSDRFVGDILELLAVIDGQIAVLEEFGNEGFS*
Ga0137374_102715253	3300012204	Vadose Zone Soil	MVNTGTRARQIRALSGVAGHLASAIDELSLSGCDWFAADILGMLAVIDGQIAALEEFGNEDSSSSLGV*
Ga0137386_104981772	3300012351	Vadose Zone Soil	GTRAREIRALSGVAGHLASALDVLLLSGCDRFAADILELLALIDGQIAVLEEFGNRDFS*
Ga0137367_101351293	3300012353	Vadose Zone Soil	MVNTGTRARQIRALSGVAGHLASVIDELSLSGCDWFAADILGMLAVIDGQIAALEEFGNEDSSSSLGV*
Ga0137367_108474621	3300012353	Vadose Zone Soil	RALSGVAGHLASALDVLLLSGSDRFVGDILELLAVIDGQIAVLEEFGNEGFS*
Ga0137369_100405085	3300012355	Vadose Zone Soil	MVGSGMRARELRALSGVAGHLASALDMLLLSGSDRFVGDILELLAVIDGQIAVLEEFGNEGFS*
Ga0137371_103211893	3300012356	Vadose Zone Soil	MVNTGTRAREIRALSGVAGHLASALDVLLLNGCDWFAADILEMLAVIDGQIAVQEELGNEDSS*
Ga0137385_103687362	3300012359	Vadose Zone Soil	MFDTGGRAQEIRTLSGVAGHLASALDVLLVSECDWFVADIVEMLAVIDGEIAVVEEIGNGESS*
Ga0137360_102656122	3300012361	Vadose Zone Soil	LTGSVLRDYQAAMVNTGTHAREIRALSGVAGHLASALDVLLLSGCEWFVADILELLAVIDGQIAVLEEFGSDGFS*
Ga0137361_116619211	3300012362	Vadose Zone Soil	GRMVNTGTRAREIRALSGVAGHLASALDVLLHSGCDWFAADILEMLAIIDGQIAVLEEFGNEDSSSSLGV*
Ga0137390_100115871	3300012363	Vadose Zone Soil	MVNTGTRARQIRALSGVAGHLASALDVLLLSGCDWFAADILEMLAVIDGQIAVLEEFGNEDSSS
Ga0137390_103486583	3300012363	Vadose Zone Soil	PSGRMVNTGTRARQIRALSGVAGHLASALDVLLLSGCDWFAADILEMLAVIDGQIAVLEEFGNKDSASSLGV*
Ga0137390_118391522	3300012363	Vadose Zone Soil	MLDTGTRANQIRALSGVAGHLASALDVLLLSGCDWFTADILEMLAVIDGQIAVLEELGSEDSSSSLGG*
Ga0157334_10097551	3300012509	Soil	MLNTGTRAQEIRVLSGVAGHLASALDVLLVSEYDRFVADILEMLAVIDGQIAVLEEFRSEGFS*
Ga0137373_104494932	3300012532	Vadose Zone Soil	MFDTGGRAQEIRTLSGVASHLASALDVLLVSECDWFVADIVEMLAVIDGQIAVLEEIGNGESS*
Ga0137359_101909412	3300012923	Vadose Zone Soil	MVNTGTHAREIRALSGVAGHLASALDVLLLSGCEWFVADILELLAVIDGQIAVLEEFGSEGFS*
Ga0137416_108966481	3300012927	Vadose Zone Soil	MVNTGTRAREIRALSGVAAHLASALDVLLLSGCDWFVADILEMLAVIDGQIAVLDELGNEDSSSSLGV*
Ga0137404_103078873	3300012929	Vadose Zone Soil	MVNTGTRAREIRALSGVAAHLASALDVLLLSGCDWFVADILEMLAVIDRQIAVLDELGNEDSSSSLGV*
Ga0137404_115244871	3300012929	Vadose Zone Soil	APEIGALSGVAGHLSSALDVLLLSGCDWFVADIRELLAVIDGQIAVLEEL*
Ga0137404_121391661	3300012929	Vadose Zone Soil	MGNTGTRAPEIRALAGVAGHLASALDVLLLSGCDWFVCDILEMLAVINEQIAVLEEFGREDSSSSLST*
Ga0153915_110964461	3300012931	Freshwater Wetlands	MFDTGTRAHEIRALSGLAGHLASALDALSLSGCDSFRADIVEMLAAIDGQIALLEALGNEGSSSSLGL*
Ga0153915_115918372	3300012931	Freshwater Wetlands	MFDTGMRALEIRALSRLAGHLASALDALSLSGCDSFRADILEMLAAIDGQIALLEALGNEGSSSTLGV*
Ga0153916_100159196	3300012964	Freshwater Wetlands	MFDTGTRAHEIRALSGLAGHLASALDALSLSGCDSFRADIVEMLAAIDGQIALLEAIGNEGSASSLGL*
Ga0134076_103317321	3300012976	Grasslands Soil	RMLDTGRHAHQIRALSGVAGYLCSALDVLALNGCDWFTTDILEILAAIDGQIAVLKKLGNESSS*
Ga0163162_104950043	3300013306	Switchgrass Rhizosphere	MLNTGTRAQEIRVLSGVAGHLASALDVLLLSEYDRFVADILEMLAAIEGQIAVLEEYPSEGFS*
Ga0157375_114500771	3300013308	Miscanthus Rhizosphere	LNTGTRAQEIRVLSGVAGHLASALDVLLLSEYDRFVADILEMLAVIDGQIAVLEEFPSEGFS*
Ga0075302_11573431	3300014269	Natural And Restored Wetlands	MWITSVLTAAQDGVTKRRMLDIGTGGDQIRVLSGVAGHLASALDVLSLGGCDWFAADILEMLAAIDGQIAALQELGDTGSDLAG*
Ga0137405_10674831	3300015053	Vadose Zone Soil	MVNTGTHAREIRALSGVAGHLASALDVLLLSGCEWFVADILELLAVIDGQIA
Ga0137403_106807002	3300015264	Vadose Zone Soil	MVNTGTHAREIRALSGVAGHLASALDVLLLSGCDWFVADIRELLAVIDGQIAVLEEL*
Ga0132258_105903102	3300015371	Arabidopsis Rhizosphere	MFDTGRRAQEIRALSGVAGHLASALDELLVSECDWFVADILEMLAVIDGQIAVLEEFGNEESS*
Ga0132256_1000609135	3300015372	Arabidopsis Rhizosphere	MLNTGTRAQEIRVLSGVAGHLASALDVLLVSEYDRFVADIIEMLAVIDGQIAVLEESRSEGFS*
Ga0132257_1001934543	3300015373	Arabidopsis Rhizosphere	AQEIRVLSGVAGHLASALDVLLLSEYDRFVADILEMLAVIDGQITVLEEFRSEGFS*
Ga0132255_1002657742	3300015374	Arabidopsis Rhizosphere	MLNTGTRAQEIRVLSGVAGHLASALDVLLLSEYDRFVADILEMLAVIDGQITVLEEFRSEGFS*
Ga0132255_1006158141	3300015374	Arabidopsis Rhizosphere	GTRAQEIRVLSGVAGHLASALDVLLVSEYDRFVADIIEMLAVIDGQIAVLEESRSEGFS*
Ga0134083_104956102	3300017659	Grasslands Soil	MLNIGTRAHEIRVLSGVAGHLASALDVLLRSECDRFVADILDMLAVIDGQIAVLEEFRNEEFS
Ga0066655_101425392	3300018431	Grasslands Soil	MLNIGTRAHEIRVLSGVAGHLASALDVLLRSECDRFVADILEMLAVIDGQIAVLEEFRNEEFS
Ga0066662_100070773	3300018468	Grasslands Soil	MGNTGTRAREIRALAGAAGHLASALDVLLLSGCDWFTGDILEMLAVINEQIAVLEEFGHEDSSSSLST
Ga0066662_129341001	3300018468	Grasslands Soil	MVNTGTRAREIRALSGVAAHLTSALDVLLLSGCDWFVADILEMLAVIDGQIAVQEELGNEDSS
Ga0066669_119885501	3300018482	Grasslands Soil	MGNTGTRAREIRALAGAAGHLASALDVLLLSGCDWFTGDILEMLAVINEQIA
Ga0247681_10458732	3300024310	Soil	MLNTGTRAQEIRVLSGVAGHLASALDVLLLSEYDRFVADILEMLAVIDGQIAVL
Ga0207684_100200527	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MFDTGRRAQEIRALSGVAGHLASALDVLLVSECDWFVADILEILAVIDGQIAVLEEFGNEESS
Ga0207684_100446712	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MGNTGTRAREIRALAGVAGHLASALDVLLLSGCDWFVCDILEMLAVINEQIAVLEEFGREDSSSSLST
Ga0207684_103030091	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MLNIGTRAHEIRVLSGVAGHLASALEVLLLSECDRFVADILEMLAVIDGQIAVLEEFRNEEFS
Ga0207646_100780305	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MVNPGTRAREIRALSGVAGHLASALDVLLLSGCDWFAADILEMLAIIDGQIAVLEEFGNEDSSSSLGV
Ga0207646_104547181	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MGNIGTRAREIRALAGVAGHLASALDALLLSECDWFVADILEMLAVIDGQIAALEEFGSEESS
Ga0207646_106197402	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MGNTGTRAREIRALAGVAGHLASALDVLLLSGCDWFVCDILEMLAVINEQIAVLEEFGHEDSSSSLST
Ga0207665_114286732	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	LNTGTRAQEIRVLSGVAGHLASALDVLLLSEYDRFVADILEMLAVIDGQIAVLEEFPSEGFS
Ga0207648_120503912	3300026089	Miscanthus Rhizosphere	RAMLNTGTRAQEIRVLSGVAGHLASALDVLLLSEYDRFVADILEMLAVIDGQIAVLEEFPSEGFS
Ga0209235_10664572	3300026296	Grasslands Soil	MLDTGRHAHQIRALSGVAGYLCSALDVLALNGCDWFTTDILEMLAAIDGQIAVLKKLGNESSS
Ga0209237_10197542	3300026297	Grasslands Soil	MLDAGTRAHQIRALSGVAGYLCSALDVLRINGCDWFTADILEMLAAIDGQIAVLKELGNESPSSSF
Ga0209471_13365232	3300026318	Soil	AREIRALSGVAAHLTSALDVLLLSGCDWFVADILEMLAVIDGQIAVQEELGNEDSS
Ga0209804_12763271	3300026335	Soil	MGNTGTRAREIRALAGAAGHLASALDVLLLSGCDWFTGDILEMLAVINEQIAVLEEFGHE
Ga0209159_11860131	3300026343	Soil	MGNTGTRAREIRALAGPAGHLASALDVLLLSGCDWFTGDILEMLAVINEQIAVLEEFGHEDSSSSLST
Ga0257156_10287562	3300026498	Soil	MLNTGTRAQEIRVLSGVAGHLASALDVLLLSEYDRFVADILEMLAVIDGQIAVLEEFPSEGSS
Ga0209160_11002503	3300026532	Soil	MVNTGTRAREIRALSGVAAHLTSALDVLLLSGCDWFVADILEMLAVIDGQIAVQEDLYL
Ga0209180_100176283	3300027846	Vadose Zone Soil	MFDTGRRAQEIRALSGVAGHLASALDVLLVSECNWFVADILEMLSVIDGQIEVLEEFSDEESS
Ga0209180_100294642	3300027846	Vadose Zone Soil	MGNTGTRAREIRALAGVAGHLASALDVLLLSGCDWFVCDILEMLAVINEQIAVLEEFGREDFSSSLST
Ga0209180_101992111	3300027846	Vadose Zone Soil	MVNTGTRARQIRALSGVAGHLASALDVLLLSGCDWFAADILEMLAVIDGQIAVLEEFGNEDSSSSLGV
Ga0209180_105417531	3300027846	Vadose Zone Soil	VYGLPSSRMVNAGTRAREIRALSGVAGHLASALDVLLPSGCDWFAADEMLAVIDGQIAVLEEFGNEDSSSSLGV
Ga0209701_101693722	3300027862	Vadose Zone Soil	MINTGTRAREIRALSGVAGHLASALDVLLLSGCDWFAADILEMLAVIDGQIAVLEEFGNEDSSSSLGV
Ga0209701_101815852	3300027862	Vadose Zone Soil	MLDTGTRARQIRALSGVAGHLASALDVLLLSGCDWFTADILEMLAVIDGQIAVLEELGSEDSSSSLGG
Ga0209283_108226142	3300027875	Vadose Zone Soil	LGLPSGRMGNTGTRAREIRALAGVAGHLASALDVLLLSGCDWFVCDILEMLAVINEQIAVLEEFGREDFSSSLGT
Ga0209283_108237161	3300027875	Vadose Zone Soil	MVNTGTRARQIRALSGVAGHLASALDVLLLSGCDWFAADILEMLAVIDGQIAVLE
Ga0209590_102200951	3300027882	Vadose Zone Soil	MVNTGTRAREIRALSGVAAHLASALDVLLLSGCDWFVADILEMLAVIDGQIAVLEQLGNEDSS
Ga0209590_110333241	3300027882	Vadose Zone Soil	MGNTDTRAREIRALAGVAGHLASALDALLLSGRDWFTGDILEMLAVINEQIAAVEEFDREDSSSSLST
Ga0137415_107494901	3300028536	Vadose Zone Soil	MVNTGTRAREIRALSGVAAHLASALDVLLLSGCDWFVADILEMLAVIDGQIAVLDELGNEDSSSSLGV
Ga0307504_100428742	3300028792	Soil	MGNTGTRAREIRALAGVAGHLASALDVLLLSGCDWFVCDILEMLAVIDEQIAVLEEFGHEDSSSSLST
(restricted) Ga0255312_10219482	3300031248	Sandy Soil	MGNTSTRAREIRALAGVAGHLASALDVLLLSGCDWFVCDILEMLAVINEQIAVLEEFGHEDSSSSLST
Ga0307468_1003920402	3300031740	Hardwood Forest Soil	MLNTGTRPQEIRVLSGVAGHLTSALDALLLGECDLFVADILGMLAVIDSQIAVLEES
Ga0307468_1005014931	3300031740	Hardwood Forest Soil	PRAMLNTGTRAQEIRVLSGVAGHLASALDVLLLSEYDRFVADILEMLAVIDGQIAVLEEFPSEGFS
Ga0307468_1007887082	3300031740	Hardwood Forest Soil	MVNTDRRAREICALAGVAGHLASALDVLLLSECDWFVADILEMLAVIDGQIAVLEEFGTEEFS
Ga0307471_1003672933	3300032180	Hardwood Forest Soil	LTRAMLNTGTRAQEIRVLSGVAGHLASALDVLLLSEYDRFVADILEMLAVIDGQIAVLEEFPSEGFS
Ga0307471_1007285311	3300032180	Hardwood Forest Soil	MFNTGRRAQEIRALAGVAGHLASALDVLLVSECNWFVADILEMLSVIDGQIAVLEEFGNEESS
Ga0307472_1006148031	3300032205	Hardwood Forest Soil	KRAMFDTGRRAHEIRVLSGVAGHLASALDVLLVSECDWFVADILEMLAVIDGQIAVLEEFGNEESEDVL
Ga0307472_1025026611	3300032205	Hardwood Forest Soil	MLNTGRRAQEIRVLSGVAGHLTSALDALLLSECDQFVADILGMLAVIDCQIAVLEESRHEEFS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters