Metagenome Family F051426

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F051426
Family Type	Metagenome
Number of Sequences	144
Average Sequence Length	63 residues
Representative Sequence	DHARALSEMADTAARDSAKCQSSGAALGSQAYKECRALLEDKMSIENDVPPDRSYASNRG
Number of Associated Samples	76
Number of Associated Scaffolds	144

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.69 %
% of genes near scaffold ends (potentially truncated)	94.44 %
% of genes from short scaffolds (< 2000 bps)	94.44 %
Associated GOLD sequencing projects	66
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.35

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (67.361 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (41.667 % of family members)
Environment Ontology (ENVO)	Unclassified (76.389 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (60.417 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 48.86% β-sheet: 0.00% Coil/Unstructured: 51.14%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.35
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.35
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 144 Family Scaffolds
PF03401	TctC	3.47
PF07045	DUF1330	3.47
PF03734	YkuD	2.78
PF04392	ABC_sub_bind	2.08
PF00578	AhpC-TSA	1.39
PF04191	PEMT	1.39
PF00589	Phage_integrase	1.39
PF12697	Abhydrolase_6	1.39
PF04377	ATE_C	1.39
PF13481	AAA_25	0.69
PF08238	Sel1	0.69
PF08811	DUF1800	0.69
PF01541	GIY-YIG	0.69
PF00188	CAP	0.69
PF00072	Response_reg	0.69
PF00582	Usp	0.69
PF00353	HemolysinCabind	0.69
PF07681	DoxX	0.69
PF09933	DUF2165	0.69
PF14559	TPR_19	0.69
PF12146	Hydrolase_4	0.69
PF00355	Rieske	0.69
PF11159	DUF2939	0.69
PF07883	Cupin_2	0.69

COG ID	Name	Functional Category	% Frequency in 144 Family Scaffolds
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	3.47
COG5470	Uncharacterized conserved protein, DUF1330 family	Function unknown [S]	3.47
COG1376	Lipoprotein-anchoring transpeptidase ErfK/SrfK	Cell wall/membrane/envelope biogenesis [M]	2.78
COG3034	Murein L,D-transpeptidase YafK	Cell wall/membrane/envelope biogenesis [M]	2.78
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	2.08
COG2935	Arginyl-tRNA--protein-N-Asp/Glu arginylyltransferase	Posttranslational modification, protein turnover, chaperones [O]	1.39
COG2259	Uncharacterized membrane protein YphA, DoxX/SURF4 family	Function unknown [S]	0.69
COG2340	Spore germination protein YkwD and related proteins with CAP (CSP/antigen 5/PR1) domain	Cell cycle control, cell division, chromosome partitioning [D]	0.69
COG4270	Uncharacterized membrane protein	Function unknown [S]	0.69
COG5267	Uncharacterized conserved protein, DUF1800 family	Function unknown [S]	0.69

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.36 %
All Organisms	root	All Organisms	32.64 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.36 %
cellular organisms	root	All Organisms → cellular organisms	32.64 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.36 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	32.64 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.36 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	22.92 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	2.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.36 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	19.44 %
Blastocatellia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	2.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.36 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	12.50 %
unclassified Blastocatellia	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia	2.78 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.36 %
Xanthobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae	4.17 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	3.47 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	2.78 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.69 %
Aurantimonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Aurantimonadaceae	0.69 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.36 %
Pseudolabrys	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys	4.17 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	2.78 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2.08 %
Methyloceanibacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter	0.69 %
Aurantimonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Aurantimonadaceae → Aurantimonas	0.69 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.36 %
Pseudolabrys taiwanensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → Pseudolabrys taiwanensis	3.47 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	2.78 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	1.39 %
unclassified Aurantimonas	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Aurantimonadaceae → Aurantimonas → unclassified Aurantimonas	0.69 %
unclassified Pseudolabrys	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys	0.69 %
Methyloceanibacter caenitepidi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter caenitepidi	0.69 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.36 %
Pseudolabrys taiwanensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → Pseudolabrys taiwanensis	3.47 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	2.78 %
Bradyrhizobium sp. STM 3843	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. STM 3843	1.39 %
Pseudolabrys sp. Root1462	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. Root1462	0.69 %
Aurantimonas sp. HBX-1	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Aurantimonadaceae → Aurantimonas → unclassified Aurantimonas → Aurantimonas sp. HBX-1	0.69 %
Methyloceanibacter caenitepidi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter caenitepidi	0.69 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.69 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000816\|AF_2010_repII_A10DRAFT_1015030	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → Pseudolabrys taiwanensis	814	Open in IMG/M
3300005332\|Ga0066388_100762849	Not Available	1565	Open in IMG/M
3300005332\|Ga0066388_103170261	Not Available	840	Open in IMG/M
3300005332\|Ga0066388_104293855	Not Available	726	Open in IMG/M
3300005332\|Ga0066388_104946123	Not Available	677	Open in IMG/M
3300005436\|Ga0070713_101787000	Not Available	597	Open in IMG/M
3300005764\|Ga0066903_100739388	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1744	Open in IMG/M
3300005764\|Ga0066903_101257238	Not Available	1379	Open in IMG/M
3300005764\|Ga0066903_101595083	Not Available	1237	Open in IMG/M
3300005764\|Ga0066903_104259682	Not Available	765	Open in IMG/M
3300005764\|Ga0066903_105234667	Not Available	686	Open in IMG/M
3300005764\|Ga0066903_105506457	Not Available	667	Open in IMG/M
3300005764\|Ga0066903_108805208	All Organisms → cellular organisms → Bacteria → Proteobacteria	512	Open in IMG/M
3300006102\|Ga0075015_100076451	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1640	Open in IMG/M
3300006172\|Ga0075018_10379985	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	714	Open in IMG/M
3300006804\|Ga0079221_10233781	Not Available	1032	Open in IMG/M
3300010360\|Ga0126372_12803990	Not Available	539	Open in IMG/M
3300010361\|Ga0126378_11211356	Not Available	853	Open in IMG/M
3300010361\|Ga0126378_13202320	Not Available	521	Open in IMG/M
3300010362\|Ga0126377_12022941	Not Available	652	Open in IMG/M
3300010376\|Ga0126381_103202216	Not Available	647	Open in IMG/M
3300010376\|Ga0126381_104149260	All Organisms → cellular organisms → Bacteria → Proteobacteria	562	Open in IMG/M
3300010398\|Ga0126383_10704086	Not Available	1088	Open in IMG/M
3300015372\|Ga0132256_103106449	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	558	Open in IMG/M
3300016270\|Ga0182036_10383298	Not Available	1091	Open in IMG/M
3300016270\|Ga0182036_10652011	Not Available	848	Open in IMG/M
3300016270\|Ga0182036_10760545	All Organisms → cellular organisms → Bacteria	787	Open in IMG/M
3300016294\|Ga0182041_10103248	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2099	Open in IMG/M
3300016294\|Ga0182041_10167115	All Organisms → cellular organisms → Bacteria	1717	Open in IMG/M
3300016294\|Ga0182041_10177994	Not Available	1672	Open in IMG/M
3300016319\|Ga0182033_11610947	Not Available	587	Open in IMG/M
3300016319\|Ga0182033_12198451	Not Available	503	Open in IMG/M
3300016341\|Ga0182035_10561108	Not Available	982	Open in IMG/M
3300016341\|Ga0182035_11099106	Not Available	707	Open in IMG/M
3300016341\|Ga0182035_11874256	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Aurantimonadaceae → Aurantimonas → unclassified Aurantimonas → Aurantimonas sp. HBX-1	544	Open in IMG/M
3300016357\|Ga0182032_10148357	Not Available	1732	Open in IMG/M
3300016357\|Ga0182032_11842974	Not Available	529	Open in IMG/M
3300016371\|Ga0182034_10500799	Not Available	1013	Open in IMG/M
3300016371\|Ga0182034_11100306	Not Available	689	Open in IMG/M
3300016371\|Ga0182034_11716763	Not Available	552	Open in IMG/M
3300016371\|Ga0182034_12061081	Not Available	504	Open in IMG/M
3300016387\|Ga0182040_11001383	Not Available	697	Open in IMG/M
3300016404\|Ga0182037_11309750	Not Available	639	Open in IMG/M
3300016404\|Ga0182037_11533406	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	591	Open in IMG/M
3300016404\|Ga0182037_11656284	Not Available	570	Open in IMG/M
3300016422\|Ga0182039_10168041	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1718	Open in IMG/M
3300016422\|Ga0182039_10512586	Not Available	1037	Open in IMG/M
3300016422\|Ga0182039_10867748	Not Available	804	Open in IMG/M
3300016422\|Ga0182039_10882430	Not Available	798	Open in IMG/M
3300016422\|Ga0182039_11029649	Not Available	739	Open in IMG/M
3300016422\|Ga0182039_11328142	Not Available	652	Open in IMG/M
3300016422\|Ga0182039_11811142	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	560	Open in IMG/M
3300016445\|Ga0182038_11015776	Not Available	735	Open in IMG/M
3300016445\|Ga0182038_11837225	Not Available	547	Open in IMG/M
3300017959\|Ga0187779_10032719	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter caenitepidi	2995	Open in IMG/M
3300017959\|Ga0187779_11278533	Not Available	519	Open in IMG/M
3300018060\|Ga0187765_10236845	Not Available	1070	Open in IMG/M
3300018060\|Ga0187765_10599378	Not Available	711	Open in IMG/M
3300020581\|Ga0210399_10501499	Not Available	1009	Open in IMG/M
3300021560\|Ga0126371_13877667	Not Available	504	Open in IMG/M
3300025898\|Ga0207692_10780502	Not Available	624	Open in IMG/M
3300027680\|Ga0207826_1131855	Not Available	684	Open in IMG/M
3300031545\|Ga0318541_10294812	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → Pseudolabrys taiwanensis	903	Open in IMG/M
3300031561\|Ga0318528_10323338	Not Available	828	Open in IMG/M
3300031561\|Ga0318528_10493336	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. STM 3843	658	Open in IMG/M
3300031573\|Ga0310915_10771198	Not Available	677	Open in IMG/M
3300031573\|Ga0310915_10953921	Not Available	600	Open in IMG/M
3300031573\|Ga0310915_11045555	All Organisms → cellular organisms → Bacteria	569	Open in IMG/M
3300031668\|Ga0318542_10042622	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → Pseudolabrys taiwanensis	2024	Open in IMG/M
3300031679\|Ga0318561_10426150	Not Available	729	Open in IMG/M
3300031682\|Ga0318560_10412331	Not Available	731	Open in IMG/M
3300031719\|Ga0306917_11410936	Not Available	537	Open in IMG/M
3300031719\|Ga0306917_11463479	Not Available	526	Open in IMG/M
3300031724\|Ga0318500_10136802	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1144	Open in IMG/M
3300031736\|Ga0318501_10237353	Not Available	962	Open in IMG/M
3300031744\|Ga0306918_10332254	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	1176	Open in IMG/M
3300031744\|Ga0306918_10803579	All Organisms → cellular organisms → Bacteria	734	Open in IMG/M
3300031744\|Ga0306918_10931336	Not Available	676	Open in IMG/M
3300031754\|Ga0307475_10308475	Not Available	1271	Open in IMG/M
3300031763\|Ga0318537_10067705	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1307	Open in IMG/M
3300031764\|Ga0318535_10340402	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → Pseudolabrys taiwanensis	671	Open in IMG/M
3300031768\|Ga0318509_10086979	Not Available	1666	Open in IMG/M
3300031768\|Ga0318509_10685207	Not Available	569	Open in IMG/M
3300031771\|Ga0318546_11216218	Not Available	529	Open in IMG/M
3300031796\|Ga0318576_10361514	Not Available	686	Open in IMG/M
3300031797\|Ga0318550_10004774	All Organisms → cellular organisms → Bacteria → Proteobacteria	4784	Open in IMG/M
3300031820\|Ga0307473_10102590	Not Available	1527	Open in IMG/M
3300031833\|Ga0310917_10183004	Not Available	1396	Open in IMG/M
3300031879\|Ga0306919_10145975	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. Root1462	1721	Open in IMG/M
3300031879\|Ga0306919_11074093	Not Available	614	Open in IMG/M
3300031890\|Ga0306925_11444836	All Organisms → cellular organisms → Bacteria	676	Open in IMG/M
3300031893\|Ga0318536_10307697	Not Available	804	Open in IMG/M
3300031894\|Ga0318522_10419319	Not Available	507	Open in IMG/M
3300031897\|Ga0318520_10635262	Not Available	665	Open in IMG/M
3300031910\|Ga0306923_11771616	Not Available	635	Open in IMG/M
3300031910\|Ga0306923_12428716	Not Available	519	Open in IMG/M
3300031912\|Ga0306921_10260930	All Organisms → cellular organisms → Bacteria	2029	Open in IMG/M
3300031912\|Ga0306921_10957200	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	968	Open in IMG/M
3300031912\|Ga0306921_12206005	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	580	Open in IMG/M
3300031941\|Ga0310912_10290546	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	1264	Open in IMG/M
3300031941\|Ga0310912_10427271	Not Available	1032	Open in IMG/M
3300031942\|Ga0310916_10918094	All Organisms → cellular organisms → Bacteria	733	Open in IMG/M
3300031945\|Ga0310913_11195725	Not Available	529	Open in IMG/M
3300031946\|Ga0310910_11163526	Not Available	599	Open in IMG/M
3300031947\|Ga0310909_10264137	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1439	Open in IMG/M
3300031947\|Ga0310909_10275920	All Organisms → cellular organisms → Bacteria → Proteobacteria	1407	Open in IMG/M
3300031947\|Ga0310909_10524525	Not Available	992	Open in IMG/M
3300031947\|Ga0310909_11535388	Not Available	529	Open in IMG/M
3300031954\|Ga0306926_10490404	All Organisms → cellular organisms → Bacteria → Proteobacteria	1511	Open in IMG/M
3300031954\|Ga0306926_10646219	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1288	Open in IMG/M
3300031954\|Ga0306926_10664880	Not Available	1266	Open in IMG/M
3300031954\|Ga0306926_11349087	Not Available	830	Open in IMG/M
3300031954\|Ga0306926_11593660	Not Available	749	Open in IMG/M
3300031954\|Ga0306926_12429358	Not Available	577	Open in IMG/M
3300031954\|Ga0306926_12925032	Not Available	512	Open in IMG/M
3300031981\|Ga0318531_10085262	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1379	Open in IMG/M
3300031981\|Ga0318531_10091505	Not Available	1333	Open in IMG/M
3300031981\|Ga0318531_10580615	Not Available	508	Open in IMG/M
3300032001\|Ga0306922_10986357	Not Available	870	Open in IMG/M
3300032010\|Ga0318569_10493077	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → Pseudolabrys taiwanensis	571	Open in IMG/M
3300032035\|Ga0310911_10257507	Not Available	1000	Open in IMG/M
3300032035\|Ga0310911_10352611	Not Available	850	Open in IMG/M
3300032035\|Ga0310911_10529187	All Organisms → cellular organisms → Bacteria	683	Open in IMG/M
3300032043\|Ga0318556_10596497	Not Available	576	Open in IMG/M
3300032044\|Ga0318558_10278725	Not Available	825	Open in IMG/M
3300032052\|Ga0318506_10480533	Not Available	551	Open in IMG/M
3300032059\|Ga0318533_10167845	Not Available	1560	Open in IMG/M
3300032060\|Ga0318505_10208015	Not Available	917	Open in IMG/M
3300032063\|Ga0318504_10515670	Not Available	573	Open in IMG/M
3300032068\|Ga0318553_10009820	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4159	Open in IMG/M
3300032076\|Ga0306924_10252916	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2023	Open in IMG/M
3300032076\|Ga0306924_10649516	Not Available	1189	Open in IMG/M
3300032076\|Ga0306924_11478992	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. STM 3843	721	Open in IMG/M
3300032076\|Ga0306924_12205718	All Organisms → cellular organisms → Bacteria	561	Open in IMG/M
3300032076\|Ga0306924_12459453	Not Available	523	Open in IMG/M
3300032090\|Ga0318518_10424380	Not Available	682	Open in IMG/M
3300032261\|Ga0306920_100232441	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2751	Open in IMG/M
3300032261\|Ga0306920_100948475	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	1255	Open in IMG/M
3300032261\|Ga0306920_102291427	Not Available	748	Open in IMG/M
3300032261\|Ga0306920_102882739	Not Available	652	Open in IMG/M
3300033289\|Ga0310914_10392846	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	1255	Open in IMG/M
3300033289\|Ga0310914_10797832	Not Available	842	Open in IMG/M
3300033289\|Ga0310914_10800919	All Organisms → cellular organisms → Bacteria	840	Open in IMG/M
3300033289\|Ga0310914_11508629	Not Available	575	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.31%
Host-Associated	Host-Associated	0.69%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	97.92%
Aquatic	Environmental → Aquatic	1.39%
Plants	Host-Associated → Plants	0.69%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	97.92%
Sediment	Environmental → Aquatic → Sediment	1.39%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.69%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	85.42%
Loam	Environmental → Terrestrial → Soil → Loam	9.72%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.78%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.39%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.69%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	79.17%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	8.33%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	5.56%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.78%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.39%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.39%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.69%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.69%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	41.67%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	35.42%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	8.33%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	5.56%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	2.78%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.39%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.39%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.39%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.69%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.69%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.69%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000816	Forest soil microbial communities from Amazon forest - 2010 replicate II A10	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006102	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2013	Environmental	Open in IMG/M
3300006172	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300018060	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MG	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300027680	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 80 (SPAdes)	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031763	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f29	Environmental	Open in IMG/M
3300031764	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031797	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031894	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f18	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031981	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032010	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f22	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032043	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032052	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032060	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18	Environmental	Open in IMG/M
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental	Open in IMG/M
3300032068	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
AF_2010_repII_A10DRAFT_10150302	3300000816	Forest Soil	ERPVPPLPIDARQTTAREHARALSEMADTAARDSARCQSSGAALGSQAYKECRALLESKMSIEKDVPPDRGYTGR*
Ga0066388_1007628493	3300005332	Tropical Forest Soil	MADTAARDSAKCQSSGAALGSLAFKECRALLEDKMSIENDFPPDRSYARGRN*
Ga0066388_1031702612	3300005332	Tropical Forest Soil	MADRAARDSAKCQSSGAALGTQAYKQCRALLKDKMSIENDVPPDRSYAHTRGRN*
Ga0066388_1042938553	3300005332	Tropical Forest Soil	RQATARDHARALSEMADTAARDSARCQSSGAALGSQAYKKCRALLEDKMSIEDVPHDRGYASTRSRN*
Ga0066388_1049461232	3300005332	Tropical Forest Soil	ALSKMTDTAARDSAKCQSSGAALGSQAYKKCRALLEDKMRIENDALGADRPLK*
Ga0070713_1017870001	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MANRAAADSAKCQSAAGPLGSQAYKECRALLEAKISIEKDVPPDRAYVHILQ*
Ga0066903_1007393882	3300005764	Tropical Forest Soil	VRALSEMADTAARDSAKCQSSGAALGSQAYKKCRALLEDKTSIENAVPPDRSYASTRGR*
Ga0066903_1012572381	3300005764	Tropical Forest Soil	MADTAARDSAKCQSSGAALGSQAYKKCRALLEDKMRIENDVPPDRGYA
Ga0066903_1015950832	3300005764	Tropical Forest Soil	RQETARDHAHALSEMADTAARDSAKCRSSGAALGSQDYKKCRALLEDKMSVEKDVPPDRGFGRVN*
Ga0066903_1042596823	3300005764	Tropical Forest Soil	DTAARDSEKCQSSAAALGSQAYKECRALLEEKMSIEKDVPPDRGYARVR*
Ga0066903_1052346671	3300005764	Tropical Forest Soil	YERPVPPLPIAPKQETERDHARDLSEMADRAANVSAGCQSSGAKLGSRAYKQCRALLEDKMSIENDVPPDRSSARGRN*
Ga0066903_1055064572	3300005764	Tropical Forest Soil	LSEMADTAARDSAKCQSSGAALGSPAYKKCRALLEDKMSIENDFPPDRRHARGRN*
Ga0066903_1088052081	3300005764	Tropical Forest Soil	RDSAKCQSSGAALGSQAYKKCRALLEDKMRIENDVPPDRGYASTRGR*
Ga0075015_1000764513	3300006102	Watersheds	DSAKCQSSGAALGSQAYKKCRALLEGKTSIENEVPPDRSYASTRGR*
Ga0075018_103799853	3300006172	Watersheds	LGSCAWQATPSDHAHVLSEMADTAASDSAKCQSSGAVLGSRAHKECRALLEDKMSIEKDVPPDRGYARVN*
Ga0079221_102337812	3300006804	Agricultural Soil	MPRGHAQALSEMANRAAADSKKCQSAAGPLGSQAYKECRALLEAKINIEKDVPPDRAYVHILQ*
Ga0126372_128039901	3300010360	Tropical Forest Soil	MARDHARALSEMADTAARDSAKCQSSGAALGSQAYKKCRALLEDKMRIENDVPPDRGYASIRG
Ga0126378_112113562	3300010361	Tropical Forest Soil	ADTAARDSAKCQSSGAALGSQAYKECRALLGDKMSIENDFPPDRSYARGRN*
Ga0126378_132023201	3300010361	Tropical Forest Soil	ARALSEMADTAARDSARCQSSGAALGSQAYKKCRALLEDKMSIEDVPRDRGYASTRGRN*
Ga0126377_120229411	3300010362	Tropical Forest Soil	LSEMADTAALDSARCQSSGAALGSQAYKECRALLESKMSIENDVPPDRGYTGRWRN*
Ga0126381_1032022161	3300010376	Tropical Forest Soil	HARALSEMADTAARDSAKCQSSGAALGSQAYKECRALLGDKMSIENDFPPDRSYARGRN*
Ga0126381_1041492601	3300010376	Tropical Forest Soil	ATARDHARALSEMADTAARDSAKCQSSGAALGSQAYKECRALLEDKMRIEYDLPPDRSYARGRN*
Ga0126383_107040861	3300010398	Tropical Forest Soil	PIDARQARARDHARALSEMADTAARDSEKCQSSGAALGSQAYKKCRTLLDKMSFENDFPPDRRRN*
Ga0132256_1031064491	3300015372	Arabidopsis Rhizosphere	HARELSEMADRAADVSARCQSSGAALGSQAYKKCRALLEDKMSIENGIPPDRSYVSTRGR
Ga0182036_103832981	3300016270	Soil	LSEMADTAARDSAKCQSSGAAFGSQAYKECRALLEDTMSIENDVPLDRSYARSRGRN
Ga0182036_106520111	3300016270	Soil	TASNHARALSEMADTAARDSAKCQSSGAALGSQAYQKCRALLEDKMSVENDVPPDRSYASTRGR
Ga0182036_107605452	3300016270	Soil	LPIAPRQAMARDHARALSEMADAAARDSAKCQSSSAALGSQAYKKCRALLEDKMRIENDVPPDRGYASIRGR
Ga0182041_101032485	3300016294	Soil	AARDSAKCQSSGAAFGSQAYKKCRALLEDKMSIENDAPPDRSYASTRGR
Ga0182041_101671151	3300016294	Soil	RQATARDHARALSEMADTAARDSAKCQSSGAALGSPAYKKCRALLEDKMSIQNDFPPGRSYARGRN
Ga0182041_101779941	3300016294	Soil	TAARDSAKCQSSGAALGSQAYKECRALLEDKMSIENDVPPDRSYASNRGR
Ga0182033_116109472	3300016319	Soil	LSEMADTAARDSAKCQSSGAAFGSQAYKKCRALLEDKMSIENDAPPDRSYASTRGR
Ga0182033_121984512	3300016319	Soil	RDHARALSEMADTAARDSERCQSSGAVLGSHAYKECRALLGDKMSIEKDVLRDESYARTRGRN
Ga0182035_105611081	3300016341	Soil	RQATARDHARALSEMADTAARDSARCQSSGAVLGSKAYKECRALLGDKMSIEKDVPRDESYARTRGRN
Ga0182035_110991061	3300016341	Soil	RDHARALSEMADTAALDSARCQSSGAALGSQAYKECRALLGDRMNIEKVPPDRGYARTRA
Ga0182035_118742562	3300016341	Soil	MADTAARDSAKCQSSGAALGSPAYKKCRALLEDKMSIQNDFPPDRSYARG
Ga0182032_101483571	3300016357	Soil	TDDGGQMADTAALDSARCQSSGAALGSQAYKGCRALLGDKMSIEKDVPPDTGYARTRGN
Ga0182032_118429741	3300016357	Soil	GPKQATASDHARALSEMADTAARDSAKCQSSGAAFSSQAYKECRALLEDTMSIENDVPLDRSYARSRGRN
Ga0182034_105007991	3300016371	Soil	PVPPLPIGPRQTTAPDHARALSEMADIAARDSAKCQLSGAALGSRAYKKCRALLEDKMMSIETNVPPDRSYASTRGR
Ga0182034_111003062	3300016371	Soil	SEMADTAALDSARCQSSGAALGSQAYKECRALLGDRMNIEKDVLPDTGYARSREN
Ga0182034_117167631	3300016371	Soil	RALSEMADTAARDSAKCQSSGAAFGSQAYKECRALLEDTMSIENDVPLDRSYARSRGRN
Ga0182034_120610812	3300016371	Soil	QATARDHARALSEMADTAARDSAKCQSSGTALGSPAYKKCRALLEDKMSIQNDFPPDRSYARGRN
Ga0182040_110013832	3300016387	Soil	RALSEMADIAARDSAKCQLSGAALGSRAYKKCRALLEDKMMSIETNVPPDRSYASTRGR
Ga0182037_113097501	3300016404	Soil	IDARQATARDHARALSEMADTAARDSARCQSSGAALGSQAYKECRALLESKMSIEKNVPNDRGYTGRLRN
Ga0182037_115334061	3300016404	Soil	PVPPLPIAARQATARDHARALSEMADTAARDSAKCQSSGATLGSLAYKKCRALLEDKMSIENDFPPDRSYARGRN
Ga0182037_116562842	3300016404	Soil	ALSEMADRAARDNARCQSSGAALGSQAYKECRALLESKMSIEKDVPPDRGYTGRWRN
Ga0182039_101680414	3300016422	Soil	LPIAPRQAMARDHARALSEMADTAARDSAKCQSSGAALGSQAYKKCRALLEDKMRIENDVPPDRGYASIRGR
Ga0182039_105125861	3300016422	Soil	VPPLPIDARQTTARDHARALSEMADTAALDSARCQSSGAALGSQAYKGCRALLGDKMSIEKDVPPDTGYARTRGN
Ga0182039_108677482	3300016422	Soil	DARQTTARDHARALSEMADTAALDSARCQSSGAALESQAYKECRALLGDRMNIEKDVLPDTGYARSREN
Ga0182039_108824301	3300016422	Soil	QATASNHARALSEMADTAARDSAKCQSSGAALGSQAYQKCRALLEDKMSVENDVPPDRSYASTRGR
Ga0182039_110296492	3300016422	Soil	PVPPLPIDARQATARDHARALSEMADTAARDSARCQSSGAALGSQAYKECRALLESKMSIEKNVPNDRGYTRRLRN
Ga0182039_113281421	3300016422	Soil	AARQATARDHARALSEMADTAARDSARCQSSGAVLGSKAYKECRALLGDKMSIEKDVLRDESYARTRGRN
Ga0182039_118111421	3300016422	Soil	MADTAASDSAKCQSSGAALGSQAYKECRALLESKMSIEKDVPPDRGYTGR
Ga0182038_110157761	3300016445	Soil	PLPIAARQATARDHARVLSEMADTAARDSARCQSSGAVLGSKAYKECRALLGDKMSIEKDVPRDESYARTRGRN
Ga0182038_118372251	3300016445	Soil	RPVPPLPIGPRQSDHARALSEMADTAARATAKCQSSGAALGSQAYKKCRALLENKMSIENEVRPDRSYASTRGR
Ga0187779_100327191	3300017959	Tropical Peatland	MADAAARDSEKCQSSGAALGSQAYKKCRTLLDKMSFENDFPPDRTYARRQN
Ga0187779_112785331	3300017959	Tropical Peatland	MADAAARDSEKCQSSGATLGSQAYKKCRTLLDKMSFENDFPPDRRRN
Ga0187765_102368451	3300018060	Tropical Peatland	AHTAARDSTKCQSSGAAPGSQAYKECRALLEDTMSIENDVPLDRSYARTRGRN
Ga0187765_105993781	3300018060	Tropical Peatland	GPRQATASDHARVLSEMADTAARDSAKCQSSGAALGTPAYKKCRALLEDKMSIDDVWPGRTYGSTRGR
Ga0210399_105014991	3300020581	Soil	SKMADTAARNSAKCQSSGAALGSQAYKKCRALLEDKMSIENDVLPDRSYASTRGR
Ga0126371_138776671	3300021560	Tropical Forest Soil	MADRAARDSAKCQSSGAAFGSQAYKKCRALLEDKMSIENDVPPDRSYASTRGR
Ga0207692_107805023	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	DSAKCQSSGAALGSQAYKKCRALLEDKMNIENDVPPDRSYGSTRGR
Ga0207826_11318551	3300027680	Tropical Forest Soil	MADTAARDSAKCQSSGAALGSQAYKKCRALLENKMSIENEVRPDRSYASTRGR
Ga0318541_102948123	3300031545	Soil	SIDAGQTTAREHARALSEMADTAARDSARCQSSGAALGSQAYKECRALLESKMSIEKDVPPDRGYTGR
Ga0318528_103233381	3300031561	Soil	VPPLPIDARQTTARDHARALSEMADTAALDSARCQSSGAALESQAYKECRALLGDRMNIEKDVLPDTGYARSREN
Ga0318528_104933361	3300031561	Soil	AQDERPVPPLPIAPRQAMARDHARALSEMADTAARDSAKCQSSGAALGSQAYKKCRALLEDKMRIENDVPPDRGYASTRGR
Ga0310915_107711983	3300031573	Soil	RALSEMADTAARDSAKCQSSGAALGSQAYKKCRALLEDKMSIEKDVPPDRGYSRANR
Ga0310915_109539211	3300031573	Soil	VPPLPIDARQATARDHARALSEMADTAARDSARCQSSGAALGSQAYKECRALLESKMTIEKTCQTTEVIQVACATE
Ga0310915_110455552	3300031573	Soil	AQDERPIPPLPIGSRQATTTDHARALSEMTDKAARDSAKCQSSGAALGSQAYKKCRALLEDKMNIGNDVPPDRSYASTRNR
Ga0318542_100426221	3300031668	Soil	IDAGQTTAREHARALSEMADTAARDSARCQSSGAALGSQAYKECRALLESKMSIEKDVPPDRGYTGR
Ga0318561_104261502	3300031679	Soil	MRWRATKGRSHPLSIAPRQADHARALSEMADTAARDSAKCQSSGAALGSQAYKECRALLEDKMSIENDVPPDRSYASTR
Ga0318560_104123311	3300031682	Soil	QTTARDRARALSEMADTAALDSAKCQSSGAALGSQAYKGCRALLGDKMSIEKDVPPDTGYARTRGN
Ga0306917_114109361	3300031719	Soil	MRWRATKGRSHPLSIAPRQADHARALSEMADTAARDSAKCQSSGAALGSQAYKECRALLEDKMSIENDVPPDRSYASTRGR
Ga0306917_114634791	3300031719	Soil	ARALSEMADTAARDSAKCQSSGAALGSQAYKKCRALLEDKMRIENDVPPDRGYASTRGDRPLK
Ga0318500_101368021	3300031724	Soil	VRQATARDHARALSEMADTAARDSAKCQSSGTALGSPAYKKCRALLEDKMSIQNDFPPDRSYARGRN
Ga0318501_102373532	3300031736	Soil	ALDSARCQSSGAALESQAYKECRALLGDRMNIEKDVLPDTGYARSREN
Ga0306918_103322543	3300031744	Soil	VPPLPIAPRQAMARDHARALSEMADTAARDSAKCQSSGAALGSQAYKKCRALLEDKMRIENDVPPDRGYASIRGR
Ga0306918_108035792	3300031744	Soil	AARDSAKCQSSGAALGSPAYKKCRALLEDKMSIQNDFPPGRSHARGRN
Ga0306918_109313361	3300031744	Soil	MTDTAARDSAKCQSSGAALGSQAYKECRALLEDKMSIENDVPPDG
Ga0307475_103084754	3300031754	Hardwood Forest Soil	AARNSAKCQSSGAALGSQAYKKCRALLEDKMSIENDVPPDRSYASTRGR
Ga0318537_100677055	3300031763	Soil	AARQATARDHARALSEMADTAARDSAKCQSSGATLGSLAYKKCRALLEDKMSIENDFPPDRSYARGRN
Ga0318535_103404021	3300031764	Soil	ANDERPVPPLSIDAGQTTAREHARALSEMADTAARDSARCQSSGAALGSQAYKECRALLESKMSIEKDVPPDRGYTGR
Ga0318509_100869793	3300031768	Soil	MRWRATKGRSHPLSIAPRQADHARALSEMADTAARDSAKCQSSGAALGSQAYKECRALLEDKMSIENDVPPDRSYASNRGR
Ga0318509_106852072	3300031768	Soil	IGPRQTTAPDHARALSEMADIAARDSAKCQLSGAALGSRAYKKCRALLEDKMMSIETNVPPDRSYASTRGR
Ga0318546_112162181	3300031771	Soil	IAARDSAKCQSSGAALGSQAYKKCRALLEDKMRIENDVPPDRGYASTRGR
Ga0318576_103615141	3300031796	Soil	PPLPIAPRQATASNHARALSEMADTAARDSAKCQSSGAALGSQAYQKCRALLEDKMSVENDVPPDRSYASTRGR
Ga0318550_100047741	3300031797	Soil	NDERPVPPLPIDARQTTAREHARALSEMADTAARDSARCQSSGAALGSQAYKECRALLESKMSIEKDVPPDRGYTGR
Ga0307473_101025901	3300031820	Hardwood Forest Soil	TAPDHARALSEMADIAARNSAKCQSSGAALGSQAYKKCRALLENKMRIENDVPPDRSYASTRGR
Ga0310917_101830041	3300031833	Soil	AARDSAKCQSSGAALGSQDYKKCRALLEDKLSIENDIPPDRSFASTRGR
Ga0306919_101459751	3300031879	Soil	SARQAMARDHARALSEMADTAARDSAKCQSSGAALGSQAYKKCRALLEDKMSIGNDVPPDRSYASTRNR
Ga0306919_110740931	3300031879	Soil	NHARALSEMADTAARDSAKCQSSGAALGSQAYQKCRALLEDKMSVENDVPPDRSYASTRG
Ga0306925_114448362	3300031890	Soil	LAEMADRAARDTARCRSSGAALGSQAYKECRALLEDKMSIEKDVPPDRDYARVK
Ga0318536_103076972	3300031893	Soil	HARALSEMADTAALDSARCQSSGAALGSQAYKECRALLGDRMNIEKDVPPDTGYARTREN
Ga0318522_104193191	3300031894	Soil	DHARALSEMADTAARDSAKCQSSGAALGSQAYKECRALLEDKMSIENDVPPDRSYASNRG
Ga0318520_106352621	3300031897	Soil	PRQATASNHARALSEMADTAARDSAKCQSSGAALGSQAYQKCRALLEDKMSVENDVPPDRSYASTRGR
Ga0306923_117716163	3300031910	Soil	MADTAARDSAKCQSSGALLGSQAYKKCRALLEDRMSIENDIPPGRSYARGRN
Ga0306923_124287162	3300031910	Soil	PIDAGQATARDHARALSEMADTAARNSARCQSSGAALGSQAYKKCRALLEDKMSIEKNVPPDRGYSGANR
Ga0306921_102609301	3300031912	Soil	APRQAMARDHARALSEMADTAARDSAKCQSSGAALGSQAYKKCRALLEDKMRIENDVPPDRGYASIRGR
Ga0306921_109572002	3300031912	Soil	PVPPLPIDARQATARDHARALSEMADTAARDSARCQSSGAALGSQAYKECRALLESKMSIEKNVPNDRGYTGRLRN
Ga0306921_122060052	3300031912	Soil	PIAARQATARDHARALSEMADTAARDSAKCQSSGAALGSQAYKKCRALLENKMSIENDFPPDRSYYARGRN
Ga0310912_102905463	3300031941	Soil	RPVPPLPIAPRQAMARDHARALSEMADTAARDSAKCQSSGAALGSQAYKKCRALLEDKMRIENDVPPDRGYASIRGR
Ga0310912_104272711	3300031941	Soil	ARDSAKCQSSGAALGSRAYQKCRALLEDKMSVENDVPPDRSYASTRGR
Ga0310916_109180942	3300031942	Soil	HARALSEMADTAARDSAKCQSSGAALGSQAYKKCRALLEDKIRIENDVPPDRGYASTRGR
Ga0310913_111957252	3300031945	Soil	LSEMAYTAASDSAKCQSSGAALGSQAYKECRALLESKMSIEKDVPPDRGYTGRWRN
Ga0310910_111635262	3300031946	Soil	NHARALSEMADTTARDSAKCQSSGAALGSQAYKKCRALLENKMSIENEVRPDRSYASTGG
Ga0310909_102641372	3300031947	Soil	MADTAARDSAKCQSSGAALGSQAYKKCRALLEDKIRIENDVPPDRGYASTRGR
Ga0310909_102759201	3300031947	Soil	PRQEMARDHARALSEMADTAARDSAKCQSSGAALGSQAYKKCRALLEDKMRIENDVPPDRGYASIRGR
Ga0310909_105245252	3300031947	Soil	PIAPRQATASNHARALSEMADTAARDSAKCQSSGAALGSQAYQKCRALLEDKMSVENDVPPDRSYASTRGR
Ga0310909_115353882	3300031947	Soil	NSARCQSSGAALGSQAYKKCRALLEDKMSIEKDVPPDRGYSRANRVN
Ga0306926_104904041	3300031954	Soil	MARDHARALSEMADTAARDSAKCQSSGAALGSQAYKKCRALLEDKMRIENNVPPDRGYASTRGR
Ga0306926_106462191	3300031954	Soil	AMARDHARALSEMADTAARDSAKCQSSGAALGSPAYKKCRALLEDKMRIENDVPPDRGAASIRGR
Ga0306926_106648803	3300031954	Soil	QTTAPDHARALSEMADIAARDSAKCQLSGAALGSRAYKKCRALLEDKMMSIETNVPPDRSYASTRGR
Ga0306926_113490871	3300031954	Soil	MPIARQADHARALSEMADTAARDSAKCQSSGAALGSRAYKECRALLEDKMSIENDVPPDRSYASPRGR
Ga0306926_115936601	3300031954	Soil	PLPIDAGQATARDHARALSEMADTAARDSAKCQSSGAALGSQAYKKCRALLEDKMSIEKDVPPDRGYSRANR
Ga0306926_124293581	3300031954	Soil	MTDKAARDSAKCQSSGAALGSQAYKKCRALLEDKMSIGNDVPPDRSY
Ga0306926_129250321	3300031954	Soil	LPIGPRQSNHARALSEMADTTARDSAKCQSSGAALGSQAYKKCRALLENKMSIENEVRPDRSYASTGGR
Ga0318531_100852621	3300031981	Soil	APRQATASNHARALSEMADTAARDSAKCQSSGAALGSQAYQKCRALLEDKMSVENDVPPDRSYASTRGR
Ga0318531_100915051	3300031981	Soil	KPVPPLPIDARQTTARDHARALSEMADTAALDSARCQSSGAALGSQAYKGCRALLGDKMSIEKDVPPDTGYARTRGN
Ga0318531_105806151	3300031981	Soil	RQATARDHARALSEMADTAARDSAKCQSSGATLGSLAYKKCRALLEDKMSIENDFPPDRSYARGRN
Ga0306922_109863571	3300032001	Soil	TAARDSARCQSSGAALGSQAYKRCRALLEDKMSVEKDGPTDRGYTGRWSN
Ga0318569_104930771	3300032010	Soil	VPPLPIDARQTTAREHARALSEMADTAARDSARCQSSGAALGSQAYKECRALLESKMSIEKDVPPDRGYTGR
Ga0310911_102575073	3300032035	Soil	IAPRQEMARDHARALSEMTDTAARDSAKCQSSGAAVGSQAYKKCRALLEDKMRIENDVPPDRGYASIRGR
Ga0310911_103526111	3300032035	Soil	ATARDHARALSEMADTAARDSARCQSSGAVLGSKAYKECRALLGDKMSIEKDVPRDESYARTRGRN
Ga0310911_105291871	3300032035	Soil	MADTAARDSAKCQSSGAALGSPAYKKCRALLEDKMSIEKDVPPDRGYSRANR
Ga0318556_105964972	3300032043	Soil	QATARDHARALSEMADTAARDSEKCQSSGAALGSQAYKKCRALLGEKMSIEKDVPPDRGYSRANR
Ga0318558_102787251	3300032044	Soil	PIAPRQAVARDHARALSEMADTAARDSAKCQSSGAALGSQAYKECRALLEDKMSIENDVPPNRSYTRTRARN
Ga0318506_104805331	3300032052	Soil	IAARDSAKCQLSGAALGSQAYKKCRALLEDKMMSIENNVPPDRSYASTRGR
Ga0318533_101678451	3300032059	Soil	MADTAARDSAKCQSSGAALGSQAYQKCRALLEDKMSVENDVPPDRSYASTRGR
Ga0318505_102080151	3300032060	Soil	RALSEMADTAARDSAKCQSSGAALGSQAYQKCRALLEDKMSVENDVPPDRSYASTRGR
Ga0318504_105156702	3300032063	Soil	KTDDGGQMADTAALDSARCQSSGAALGSQAYKGCRALLGDKMSIEKDVPPDTGYARTRGN
Ga0318553_100098201	3300032068	Soil	NDERPVPPLSIDAGQTTAREHARALSEMADTAARDSARCQSSGAALGSQAYKECRALLESKMSIEKDVPPDRGYTGR
Ga0306924_102529161	3300032076	Soil	ATASNHARALSEMADTAARDSAKCQSSGAALGSQAYQKCRALLEDKMSVENDVPPDRSYASTRGR
Ga0306924_106495162	3300032076	Soil	LPIAPRQATASNHARALSEMADTAARDSAKCQSSGAALGSQAYQKCRALLEDKMSVENDVPPDRSYASTRGR
Ga0306924_114789921	3300032076	Soil	PLPIAPRQAMARDHARALSEMADAAARDSAKCQSSGAALGSQAYKKCRALLEDKMRIENDVPPDRGYASTRGR
Ga0306924_122057181	3300032076	Soil	PLPIAPRQATARDHARALSEMADTAARDSAKCQSSGAALGSPAYKKCRALLEDKMRIENDVLPDRGYASTRGR
Ga0306924_124594531	3300032076	Soil	ALSEMADTAARDSAKCQSSGAALGSQAYKKCRALLEDKIRIENDVPPDRGYASTRGR
Ga0318518_104243801	3300032090	Soil	PPLPIAPRQATASNHARALSEMADTAARDSAKCQSSGAALGSRAYQKCRALLEDKMSVENDVPPDRSYASTRGR
Ga0306920_1002324411	3300032261	Soil	IAARQATARDHARALSEMADTAARDSAKCQSSGAALGSQAYKKCRALLENRMSIENEVRPDRSYASTRGR
Ga0306920_1009484753	3300032261	Soil	AQDERPVPPLPIAPRQAMARDHARALSEMADTAARDSAKCQSSGAALGSQAYKKCRALLEDKMRIENDVPPDRGYASIRGR
Ga0306920_1022914271	3300032261	Soil	MTDKAARDSAKCQSSGVALGSQAYKKCRALLEDKMSIGNDVPPDRSYASTRN
Ga0306920_1028827391	3300032261	Soil	PIGPRQETARDHARALSEMTDTAARDSAKCQSSGAALGSQAYKECRALLEDKMSIENDVPPDGSYARTRGRN
Ga0310914_103928461	3300033289	Soil	ERPVPPLPIAPRQAMARDHARALSEMADTAARDSAKCQSSGAALGSQAYKKCRALLEDKMRIENDVPPDRGYASIRGR
Ga0310914_107978321	3300033289	Soil	MRWRRTKVPPLPIDARQATARDHARALSEMADTAARDSEKCQSSGAALGSQAYKKCRALLGEKMSIEKDVPA
Ga0310914_108009191	3300033289	Soil	TAARDSAKCQSSGAALGSPAYKKCRALLEDKMSIQNDFPPGRSYARGRN
Ga0310914_115086291	3300033289	Soil	MADTAARDSEKCQSSGAALGSQAYKKCRALLGEKMSIEKDVPPDRGYTRVR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F051426

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences