Metagenome / Metatranscriptome Family F051434

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F051434
Family Type	Metagenome / Metatranscriptome
Number of Sequences	144
Average Sequence Length	86 residues
Representative Sequence	MRNLLAEYPAWFEPDEVQILVGAFDKAWETVQASGVVYPEAKAEAVRAILAKHIIEAAKQGERDHTRLRDGALLALAQSNLR
Number of Associated Samples	100
Number of Associated Scaffolds	144

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	53.15 %
% of genes near scaffold ends (potentially truncated)	34.03 %
% of genes from short scaffolds (< 2000 bps)	92.36 %
Associated GOLD sequencing projects	97
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.82

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (50.694 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (52.083 % of family members)
Environment Ontology (ENVO)	Unclassified (53.472 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (57.639 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 52.73% β-sheet: 0.00% Coil/Unstructured: 47.27%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.82
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.82
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Structural matches with SCOPe domains

SCOP family	SCOP domain	Representative PDB	TM-score
a.74.1.0: automated matches	d3mi9b1	3mi9	0.67211
a.74.1.1: Cyclin	d2i53a1	2i53	0.66619
c.2.1.7: Aminoacid dehydrogenase-like, C-terminal domain	d1pj3a1	1pj3	0.65641
a.286.1.1: Sama2622-like	d2pv4a1	2pv4	0.65223
d.92.1.3: Leishmanolysin	d1lmla_	1lml	0.65104

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 144 Family Scaffolds
PF00072	Response_reg	4.17
PF04392	ABC_sub_bind	4.17
PF00510	COX3	3.47
PF01402	RHH_1	0.69
PF06035	Peptidase_C93	0.69
PF00313	CSD	0.69
PF13701	DDE_Tnp_1_4	0.69
PF09351	DUF1993	0.69
PF13442	Cytochrome_CBB3	0.69
PF00293	NUDIX	0.69
PF11154	DUF2934	0.69
PF03070	TENA_THI-4	0.69
PF14706	Tnp_DNA_bind	0.69
PF03466	LysR_substrate	0.69
PF09745	NSRP1_N	0.69
PF03734	YkuD	0.69
PF02518	HATPase_c	0.69

COG ID	Name	Functional Category	% Frequency in 144 Family Scaffolds
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	4.17
COG1845	Heme/copper-type cytochrome/quinol oxidase, subunit 3	Energy production and conversion [C]	3.47
COG1376	Lipoprotein-anchoring transpeptidase ErfK/SrfK	Cell wall/membrane/envelope biogenesis [M]	0.69
COG3034	Murein L,D-transpeptidase YafK	Cell wall/membrane/envelope biogenesis [M]	0.69
COG3672	Predicted transglutaminase-like protein	Posttranslational modification, protein turnover, chaperones [O]	0.69

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	50.69 %
Unclassified	root	N/A	49.31 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	50.69 %
Unclassified	root	N/A	49.31 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	50.69 %
Unclassified	root	N/A	49.31 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.31 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	44.44 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.31 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	40.97 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.31 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	18.06 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	9.72 %
Pseudomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.31 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	13.19 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	8.33 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1.39 %
Pseudomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae	0.69 %
Methylobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	0.69 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.31 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	9.03 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	8.33 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1.39 %
Hyphomicrobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium	0.69 %
Pseudomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas	0.69 %
Methylobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.31 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	8.33 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	4.86 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1.39 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	0.69 %
Pseudomonas stutzeri group	species group	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas stutzeri group	0.69 %
Hyphomicrobium denitrificans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium → Hyphomicrobium denitrificans	0.69 %
Methylobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.31 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	8.33 %
Bradyrhizobium sp. th.b2	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. th.b2	4.17 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1.39 %
Bradyrhizobium sp. ARR65	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. ARR65	0.69 %
Pseudomonas stutzeri subgroup	species subgroup	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas stutzeri group → Pseudomonas stutzeri subgroup	0.69 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	0.69 %
Hyphomicrobium denitrificans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium → Hyphomicrobium denitrificans	0.69 %
Methylobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.31 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	8.33 %
Bradyrhizobium sp. th.b2	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. th.b2	4.17 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1.39 %
Pseudomonas stutzeri	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas stutzeri group → Pseudomonas stutzeri subgroup → Pseudomonas stutzeri	0.69 %
Bradyrhizobium sp. ARR65	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. ARR65	0.69 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	0.69 %
Hyphomicrobium denitrificans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium → Hyphomicrobium denitrificans	0.69 %
Methylobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	0.69 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2088090014\|GPIPI_16822513	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2623	Open in IMG/M
2088090014\|GPIPI_17200335	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2306	Open in IMG/M
3300000787\|JGI11643J11755_11755188	Not Available	787	Open in IMG/M
3300000956\|JGI10216J12902_101031777	Not Available	658	Open in IMG/M
3300001867\|JGI12627J18819_10143010	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	976	Open in IMG/M
3300002906\|JGI25614J43888_10052373	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1224	Open in IMG/M
3300002911\|JGI25390J43892_10124460	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium → Hyphomicrobium denitrificans	590	Open in IMG/M
3300004479\|Ga0062595_101843682	Not Available	577	Open in IMG/M
3300005160\|Ga0066820_1014173	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. th.b2	568	Open in IMG/M
3300005166\|Ga0066674_10459799	Not Available	580	Open in IMG/M
3300005166\|Ga0066674_10507557	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas stutzeri group → Pseudomonas stutzeri subgroup → Pseudomonas stutzeri	542	Open in IMG/M
3300005167\|Ga0066672_10303523	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1038	Open in IMG/M
3300005174\|Ga0066680_10253586	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1118	Open in IMG/M
3300005174\|Ga0066680_10445514	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	818	Open in IMG/M
3300005177\|Ga0066690_10820688	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. th.b2	602	Open in IMG/M
3300005181\|Ga0066678_11121977	Not Available	505	Open in IMG/M
3300005445\|Ga0070708_101607869	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. ARR65	605	Open in IMG/M
3300005467\|Ga0070706_101579910	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. th.b2	599	Open in IMG/M
3300005518\|Ga0070699_100556271	Not Available	1044	Open in IMG/M
3300005552\|Ga0066701_10343844	Not Available	924	Open in IMG/M
3300005552\|Ga0066701_10758453	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. th.b2	580	Open in IMG/M
3300005553\|Ga0066695_10395305	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	858	Open in IMG/M
3300005557\|Ga0066704_10232457	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1250	Open in IMG/M
3300005561\|Ga0066699_10833641	Not Available	647	Open in IMG/M
3300005575\|Ga0066702_10182178	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1263	Open in IMG/M
3300005937\|Ga0081455_10026706	All Organisms → cellular organisms → Bacteria → Proteobacteria	5302	Open in IMG/M
3300006034\|Ga0066656_10113578	All Organisms → cellular organisms → Bacteria → Proteobacteria	1659	Open in IMG/M
3300006046\|Ga0066652_100211245	All Organisms → cellular organisms → Bacteria	1676	Open in IMG/M
3300006172\|Ga0075018_10269112	Not Available	830	Open in IMG/M
3300006172\|Ga0075018_10623457	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	576	Open in IMG/M
3300006791\|Ga0066653_10438228	Not Available	667	Open in IMG/M
3300006794\|Ga0066658_10460322	Not Available	692	Open in IMG/M
3300006796\|Ga0066665_11353385	Not Available	549	Open in IMG/M
3300006854\|Ga0075425_102500715	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. th.b2	572	Open in IMG/M
3300007076\|Ga0075435_101052261	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	711	Open in IMG/M
3300007258\|Ga0099793_10487378	Not Available	612	Open in IMG/M
3300007258\|Ga0099793_10510109	Not Available	598	Open in IMG/M
3300007265\|Ga0099794_10569379	Not Available	599	Open in IMG/M
3300009012\|Ga0066710_100175448	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3020	Open in IMG/M
3300009012\|Ga0066710_103090921	Not Available	644	Open in IMG/M
3300009012\|Ga0066710_103147321	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	636	Open in IMG/M
3300009038\|Ga0099829_11174156	Not Available	636	Open in IMG/M
3300009038\|Ga0099829_11244787	Not Available	616	Open in IMG/M
3300009088\|Ga0099830_10303258	Not Available	1275	Open in IMG/M
3300009088\|Ga0099830_11154842	Not Available	642	Open in IMG/M
3300009090\|Ga0099827_10698805	Not Available	876	Open in IMG/M
3300009137\|Ga0066709_103478315	All Organisms → cellular organisms → Bacteria	571	Open in IMG/M
3300010301\|Ga0134070_10371121	Not Available	559	Open in IMG/M
3300010301\|Ga0134070_10442208	Not Available	519	Open in IMG/M
3300010335\|Ga0134063_10103311	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1294	Open in IMG/M
3300010399\|Ga0134127_13358751	Not Available	524	Open in IMG/M
3300011269\|Ga0137392_10236101	Not Available	1502	Open in IMG/M
3300011269\|Ga0137392_11181301	Not Available	623	Open in IMG/M
3300011270\|Ga0137391_10254401	Not Available	1521	Open in IMG/M
3300011271\|Ga0137393_10691464	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	874	Open in IMG/M
3300012096\|Ga0137389_10455329	Not Available	1096	Open in IMG/M
3300012096\|Ga0137389_10967831	Not Available	730	Open in IMG/M
3300012198\|Ga0137364_10952152	Not Available	650	Open in IMG/M
3300012199\|Ga0137383_10270387	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1245	Open in IMG/M
3300012199\|Ga0137383_10878291	Not Available	655	Open in IMG/M
3300012199\|Ga0137383_11363155	Not Available	503	Open in IMG/M
3300012201\|Ga0137365_10223616	Not Available	1404	Open in IMG/M
3300012201\|Ga0137365_11014209	Not Available	601	Open in IMG/M
3300012202\|Ga0137363_10103853	All Organisms → cellular organisms → Bacteria → Proteobacteria	2165	Open in IMG/M
3300012202\|Ga0137363_10244040	All Organisms → cellular organisms → Bacteria	1458	Open in IMG/M
3300012204\|Ga0137374_10179826	Not Available	1848	Open in IMG/M
3300012204\|Ga0137374_10248898	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1491	Open in IMG/M
3300012204\|Ga0137374_10547871	Not Available	890	Open in IMG/M
3300012205\|Ga0137362_10112643	All Organisms → cellular organisms → Bacteria	2301	Open in IMG/M
3300012205\|Ga0137362_10697244	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	873	Open in IMG/M
3300012206\|Ga0137380_10540541	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1023	Open in IMG/M
3300012207\|Ga0137381_11797714	Not Available	502	Open in IMG/M
3300012208\|Ga0137376_10104585	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2402	Open in IMG/M
3300012208\|Ga0137376_11396205	Not Available	591	Open in IMG/M
3300012209\|Ga0137379_10255345	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1665	Open in IMG/M
3300012209\|Ga0137379_10490579	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1136	Open in IMG/M
3300012210\|Ga0137378_10557394	Not Available	1055	Open in IMG/M
3300012211\|Ga0137377_10072309	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	3231	Open in IMG/M
3300012211\|Ga0137377_10224581	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1804	Open in IMG/M
3300012211\|Ga0137377_10456221	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1216	Open in IMG/M
3300012211\|Ga0137377_11709381	All Organisms → cellular organisms → Bacteria	551	Open in IMG/M
3300012211\|Ga0137377_11851134	Not Available	522	Open in IMG/M
3300012285\|Ga0137370_10117220	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1515	Open in IMG/M
3300012285\|Ga0137370_10353726	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	884	Open in IMG/M
3300012285\|Ga0137370_10488878	Not Available	753	Open in IMG/M
3300012349\|Ga0137387_10849399	Not Available	661	Open in IMG/M
3300012350\|Ga0137372_10230921	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1464	Open in IMG/M
3300012350\|Ga0137372_10396450	All Organisms → cellular organisms → Bacteria	1046	Open in IMG/M
3300012351\|Ga0137386_10117103	Not Available	1894	Open in IMG/M
3300012354\|Ga0137366_10134786	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1862	Open in IMG/M
3300012355\|Ga0137369_10296522	Not Available	1201	Open in IMG/M
3300012355\|Ga0137369_10888021	Not Available	600	Open in IMG/M
3300012356\|Ga0137371_10050522	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3215	Open in IMG/M
3300012357\|Ga0137384_10218540	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1593	Open in IMG/M
3300012357\|Ga0137384_11187336	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	607	Open in IMG/M
3300012358\|Ga0137368_10164093	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1623	Open in IMG/M
3300012358\|Ga0137368_10265673	All Organisms → cellular organisms → Bacteria	1178	Open in IMG/M
3300012359\|Ga0137385_10376477	Not Available	1213	Open in IMG/M
3300012359\|Ga0137385_10769212	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. th.b2	801	Open in IMG/M
3300012359\|Ga0137385_10783489	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	793	Open in IMG/M
3300012361\|Ga0137360_10129491	Not Available	1974	Open in IMG/M
3300012361\|Ga0137360_10857776	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	782	Open in IMG/M
3300012361\|Ga0137360_11253345	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	641	Open in IMG/M
3300012361\|Ga0137360_11295243	Not Available	629	Open in IMG/M
3300012362\|Ga0137361_10524835	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1087	Open in IMG/M
3300012362\|Ga0137361_10712816	All Organisms → cellular organisms → Bacteria → Proteobacteria	916	Open in IMG/M
3300012362\|Ga0137361_11119721	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	708	Open in IMG/M
3300012532\|Ga0137373_10254108	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1417	Open in IMG/M
3300012917\|Ga0137395_10528556	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	850	Open in IMG/M
3300012923\|Ga0137359_10232408	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1646	Open in IMG/M
3300012923\|Ga0137359_10419002	Not Available	1186	Open in IMG/M
3300012923\|Ga0137359_10631011	Not Available	938	Open in IMG/M
3300012929\|Ga0137404_10982156	Not Available	772	Open in IMG/M
3300012930\|Ga0137407_11194604	Not Available	722	Open in IMG/M
3300012930\|Ga0137407_12079821	Not Available	542	Open in IMG/M
3300012957\|Ga0164303_11277847	Not Available	542	Open in IMG/M
3300012961\|Ga0164302_11266485	Not Available	594	Open in IMG/M
3300012984\|Ga0164309_10600112	Not Available	859	Open in IMG/M
3300012985\|Ga0164308_10609420	All Organisms → cellular organisms → Bacteria	930	Open in IMG/M
3300012989\|Ga0164305_10312235	All Organisms → cellular organisms → Bacteria	1167	Open in IMG/M
3300015373\|Ga0132257_103183346	Not Available	598	Open in IMG/M
3300017657\|Ga0134074_1162490	Not Available	784	Open in IMG/M
3300018431\|Ga0066655_10883571	Not Available	610	Open in IMG/M
3300018433\|Ga0066667_10680795	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	862	Open in IMG/M
3300018468\|Ga0066662_11036560	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	815	Open in IMG/M
3300020579\|Ga0210407_10424639	Not Available	1040	Open in IMG/M
3300021168\|Ga0210406_10964308	Not Available	637	Open in IMG/M
3300022726\|Ga0242654_10363679	Not Available	547	Open in IMG/M
3300025939\|Ga0207665_11228185	Not Available	598	Open in IMG/M
3300026304\|Ga0209240_1002168	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	7509	Open in IMG/M
3300026317\|Ga0209154_1080862	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1401	Open in IMG/M
3300026319\|Ga0209647_1091690	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1471	Open in IMG/M
3300026354\|Ga0257180_1052139	Not Available	582	Open in IMG/M
3300026494\|Ga0257159_1045219	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	745	Open in IMG/M
3300026498\|Ga0257156_1025520	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	1186	Open in IMG/M
3300026532\|Ga0209160_1141433	Not Available	1130	Open in IMG/M
3300026557\|Ga0179587_10784253	Not Available	628	Open in IMG/M
3300027548\|Ga0209523_1073367	Not Available	706	Open in IMG/M
3300028536\|Ga0137415_10260314	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1542	Open in IMG/M
3300028881\|Ga0307277_10287297	Not Available	728	Open in IMG/M
3300031720\|Ga0307469_12155629	Not Available	542	Open in IMG/M
3300032180\|Ga0307471_100540982	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1318	Open in IMG/M
3300032180\|Ga0307471_103830332	Not Available	532	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	97.22%
Host-Associated	Host-Associated	2.78%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	95.83%
Plants	Host-Associated → Plants	2.78%
Aquatic	Environmental → Aquatic	1.39%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	95.83%
Sediment	Environmental → Aquatic → Sediment	1.39%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.39%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.39%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	91.67%
Loam	Environmental → Terrestrial → Soil → Loam	4.17%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.39%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.39%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.69%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.69%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	60.42%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	24.31%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	6.25%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.78%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.39%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.39%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.39%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.69%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.69%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.69%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	52.08%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	16.67%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	7.64%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.17%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	4.17%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	2.78%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.78%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.08%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.39%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.39%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.39%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.69%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.69%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.69%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.69%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.69%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2088090014	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000787	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001867	Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)	Environmental	Open in IMG/M
3300002906	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_60cm	Environmental	Open in IMG/M
3300002911	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005160	Soil and rhizosphere microbial communities from Laval, Canada - mgLMB	Environmental	Open in IMG/M
3300005166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005553	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005575	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151	Environmental	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006172	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014	Environmental	Open in IMG/M
3300006791	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102	Environmental	Open in IMG/M
3300006794	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300010301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09082015	Environmental	Open in IMG/M
3300010335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012358	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_100_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012532	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300017657	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09212015	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300022726	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_80cm (SPAdes)	Environmental	Open in IMG/M
3300026317	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121 (SPAdes)	Environmental	Open in IMG/M
3300026319	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_60cm (SPAdes)	Environmental	Open in IMG/M
3300026354	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-04-B	Environmental	Open in IMG/M
3300026494	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-07-A	Environmental	Open in IMG/M
3300026498	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-49-A	Environmental	Open in IMG/M
3300026532	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153 (SPAdes)	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027548	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300028881	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_116	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GPIPI_03761460	2088090014	Soil	MRNLLAEYPAWFEPDEVQILVGAFDKAWETVQASGVVYPEAKAEAVRAILAKHIIEAAKQGERDHTRLRDGALLALAQSNLRNSPPPPPR
GPIPI_02284740	2088090014	Soil	LAEYPAWFEPDEVQILVGAFDKAWETVQASGVVYPEAKAEAVRAILAKHIIEAAKQGERDHTRLRDGALLALAQSNLRNSPPPPPR
JGI11643J11755_117551881	3300000787	Soil	MRNLLAEYPAWFEPDEVQILVGAFDKAWETVQASGVVYPEAKAEAVRAILAKHIIEAAKQGERDHTRLRDGALLALAQSNLRNSPPPPR*
JGI10216J12902_1010317772	3300000956	Soil	MLGFLKEHPEVFDPDDAFDKVWQTAQASGVVYPEAQAEAARAILAKHIIEAAKQGERDYARLCDGALRALAQSNLRTAPRPQR*
JGI12627J18819_101430102	3300001867	Forest Soil	MRNLLAEYPAWFEPDEVQILVAAFDKAWETVQASGVIYPKAKAEAARAILAKHIIEAAKQGERDHARLRDGALLALAQTNLRNASHQLR*
JGI25614J43888_100523732	3300002906	Grasslands Soil	MRNLLAEYPAWFEPDEVQILLAAFDKAWEAVQASSIRYPADKLESVRAILAKRIIAAAVDGERDLGRLRDGALLALAQSNP*
JGI25390J43892_101244601	3300002911	Grasslands Soil	MRNLLAECPAWFEPDEVQILLAAFDKAWEAVQASSIRYPADKLESVRAILAKRIIAAAVDGERDLGRLRDGALLALAQSNP*
Ga0062595_1018436822	3300004479	Soil	MRNLLAEYPAWFEPDEVQILVGAFDKAWETVQASGVVYPEAKAEAVRAILAKHIIEAAKQGERDHTRLRDGALLALAQSNLRNSPPPPPR*
Ga0066820_10141731	3300005160	Soil	MRGFLKEHSGAFDPDEVHTLVAAFDKAWETVQASGVVYHEAKAEAVRAILAKHIIEAAKQGERDHTRLRDGALLALARSNLPNSRPPPRR*
Ga0066674_104597991	3300005166	Soil	GQRMRTFLAEHSEAFDPDEVHTLIAAFDKAWETIQASGVVYPEAKAETVRAILAKHIIAAAKNGERDHGRLRDGALLALAQSNLRT*
Ga0066674_105075571	3300005166	Soil	AARHATGRPLPSPVDSGEMRNLLAEYPAWFEPDEVQILLAAFDKAWEAVQASSIRYPADKLESVRAILAKRIIAAAMDGERDLGRLRDGALLALAQSNL*
Ga0066672_103035231	3300005167	Soil	MRTFLAEHSEAFNPDEVHTLIVAFDRAWETIQASGVVYPEAKAEIVRAILARHIIAAAKNGERDHGRLRDGALLALAQSNLRT*
Ga0066680_102535861	3300005174	Soil	WFEPDEVQILLAAFDKAWEAVQASSIRYPADKLESVRAILAKRIIAAAVDGERDLGRLRDGALLALAQSNP*
Ga0066680_104455142	3300005174	Soil	WFEPDEVQILLAAFDKAWEAVQASSIRYPADKLESVRAILAKRIIAAAMDGERDLGRLCDGALLALAQSNL*
Ga0066690_108206881	3300005177	Soil	MRNLLAEYPAWFEPDEVQILVGAFDKAWETVQATGVVYAEAKAEAVRTILAKHIIEAAKQGERDHARLRDGALLALAQSNLRNLPPPPPR*
Ga0066678_111219772	3300005181	Soil	MRNLLAEYPAWFEPDEVQILLAAFDKAWEAVQASSIRYPADKLESVRAILAKRIIAAAMDGERDLGRLRDGALLALAQSNL*
Ga0070708_1016078691	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MRNLLAEYPAWFEPDEVQILVAAFDKAWEAVQASVVIYPEAKAEAARAILAKHIIEAAKQGERDHARLRDGALLALRLTNLRNASHQPR*
Ga0070706_1015799101	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MGSGEMRNLLAEYPAWFEPDEVQILVAAFDKAWETVQASGVIFPKAQAEAARAILAKHIIEAAKQGERDHARLRDGALLALRLTNLRNASHQPR*
Ga0070699_1005562712	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MRNLLAEYPAWFEPDEVQILLAAFDKAWEAVQASSIRYPADKLESVRAILAKRIIAAAMDGERDLGRLRDGALLALAQSNP*
Ga0066701_103438442	3300005552	Soil	MRNLLAEYPAWFEPDEVQILLAAFDKAWEAVQASSIRYPADKLESVRAILAKRIIAAAVDGERDLGRLRDGALLALAQSNL*
Ga0066701_107584531	3300005552	Soil	MRTFLAEHSEGAFDPDEVHTLIAAFDRAWETIQASGVVYPEAKAAIVRAILAKHIIAAAKNGERDHGRLRDGALLALAQSNLRT*
Ga0066695_103953051	3300005553	Soil	MRGYLKDHVGVFEPDEVVILLAAFDNAWGAVQASGVRYPADKLEFVRAILAKHIIAAAMEGERDVGRLRDRALLALAQSNLRSG*
Ga0066704_102324573	3300005557	Soil	MRNLLAEYPAWFEPDEVQILLAAFDKAWGAVQASSIRYPADKLESVRAILAKRIIAAAMDGERDLGRLCDGALLALAQSNL*
Ga0066699_108336412	3300005561	Soil	LLAEYPAWFEPDEVQILLAAFDKAWEAVQASSIRYPADKLESVRAILAKRIIAAAVDGERDLGRLRDGALLALAQSNL*
Ga0066702_101821781	3300005575	Soil	MRTFLAEHSEAFDPDEVHTLIAAFDKAWETIQASGVVYPEAKAAIVRAILAKHIIAAAKNGERDHGRLRDGALLALAQSNLRT*
Ga0081455_100267063	3300005937	Tabebuia Heterophylla Rhizosphere	MRDLLAEYPAWFEPDEVQILVAAFDKAWETVQASGVVYAEAKAEAVRAILAKHIIEAAKQGERDHTRLRDGALLALAQSNLRTAPDPLR*
Ga0066656_101135782	3300006034	Soil	RPLPSPVDSGEMRNLLAEYPAWFEPDEVQILLAAFDKAWEAVQASSIRYPADKLESVRAILAKRIIAAAMDGERDLGRLRDGALLALAQSNL*
Ga0066652_1002112451	3300006046	Soil	MRSLLAEYPAWFDPDEVQILLAAFDKAWEAVQASGVTYPADKIESVRTILSKHIIAAAMDGERDLGRLRDGALLALAQSNLRSGPASKLS*
Ga0075018_102691121	3300006172	Watersheds	MRDLLAWFDPDEVEILVAAFDKAWETVQASGVVYSEAKAEAVRAILAKHIIAAARDGELDYARLRDGALLALAQSNLSSASPLP*
Ga0075018_106234571	3300006172	Watersheds	MRDLLAEYPAWFEPGEVQILVAAFDKAWETVQASGMVYTKANAEAVRAILAKHIIEAARQGERDHTRLRDGALLALAQSNLRNSPPPPPR*
Ga0066653_104382282	3300006791	Soil	MRTFLAEHSEAFDPDEVHTLIAAFDRAWETIQASGVVYPEAKAETVRAILAKHIIAAAKNGERDHGRLRDGALLALAQSNL
Ga0066658_104603222	3300006794	Soil	WFEHDEVQILLAAFDKAWEAVQASSIRYPADKLESVRAILAKRIIAAAVDGERDLGRLRDGALLALAQSNP*
Ga0066665_113533852	3300006796	Soil	MRNLLAEYPAWFEPDEVQILVGAFDKAWETVQATGVVYAEAKAEAVRTILAKHIVEAAKQGERDHARLREGALLALAQSNLRNSPPPPPR*
Ga0075425_1025007151	3300006854	Populus Rhizosphere	MRNLLAEYPAWFEPDEVQILVAAFDKAWETVQASGVVYPEAKAEAVRAILAKHIIEAAKQGERDHTRLRDGALLALAQSNLRNSPPPPPR*
Ga0075435_1010522611	3300007076	Populus Rhizosphere	MRNLLAEYPAWFEPDEIQILVAAFDKAWEAVQASSIRYPADKLESVRAILAKRIIAAAMDGERDLGRLRDGALLALAQSNL*
Ga0099793_104873781	3300007258	Vadose Zone Soil	VGSREMRDLLAWFDPDEVEILVAAFDKAWETVQASGVVYSEAKAEAVRAILAKHIIAAARDGELDYARLRDGALLALAQSNLSDISLK
Ga0099793_105101091	3300007258	Vadose Zone Soil	SGKMRDLLAEYPAWFEPDEVQILLAAFDKAWEAVQASSIRYPADKLESVRAILAKRIIAAAVDGERDLGRLRDGALLALAQSNP*
Ga0099794_105693791	3300007265	Vadose Zone Soil	VDSGEMRNLLAEYPAWFEPDEVQILLAAFDNAWEAVQASSIRYPADKLESVRAILAKRIIAAAVDGERDLGRLRDGALLALAQSNP*
Ga0066710_1001754483	3300009012	Grasslands Soil	MRNFLAEHSGAFDPDEVHTLVAAFDKAWEAIQASGVVYPEAKAETVRAILAKHIIAAAKNGERDHGRLCDGALLALAQANLRTSDRPPR
Ga0066710_1030909211	3300009012	Grasslands Soil	MRTFLAEHSEGAFDPDEVHTLIAAFDRAWETIQASGVVYPEAKAAIVRAILAKHIIAAAKNGERDHGRLRDGALLALAQSNLRT
Ga0066710_1031473211	3300009012	Grasslands Soil	MRNLLAEYPAWFEPDEVQILVGAFDKAWETVQATGVVYAEAKAEAVRTILAKHIIEAAKQGERDHARLRDGALLALAQSNLRNLPPPPPR
Ga0099829_111741562	3300009038	Vadose Zone Soil	RWLSRPERGGGEMRGFLKEHSGAFDPDEVHTLVAAFDKAWETVQASGVVYPEAKAEAVRAILAKHIIEAAKQGERDHARLRDGALLALAQSNLRNAPPPPPR*
Ga0099829_112447871	3300009038	Vadose Zone Soil	VGSREMRDLLAWFDPDEVEILVAAFDKAWETVQASGVVYSEAKAEAVRAILAKHIIAAARDGELDYARLRDGALLALAQSNLSSASPLP*
Ga0099830_103032581	3300009088	Vadose Zone Soil	MHGFLAEHSGAFTPDEVHTLVAAFDKAWETIQASGVVYPEAKAEAVRAILAKHIIEAAKQGERDHARLRDGALLALAKSNLRNAPPPPPR*
Ga0099830_111548421	3300009088	Vadose Zone Soil	VDSGEMRNLLAEYPAWFEPDEVQILLAAFDKAWEAVQASSIRYPADKLESVRAILAKRIIAAAVDGERDLGRLRDGALLALAQSNP*
Ga0099827_106988051	3300009090	Vadose Zone Soil	MRNLLAEYPAWFERDEVQVLLAAFDKAWEAVQASSIRYPADKLESVRAILAKRIIAAAVDGERDLGRLRDGALLALAQSNP*
Ga0066709_1034783152	3300009137	Grasslands Soil	WFEPDEVQILVAAFDKAWETVQASGMVYAQANAEAVRAILAKHIIEAARQDERDHTRLRDGALLALAQSNLRNSPPPPPR*
Ga0134070_103711212	3300010301	Grasslands Soil	MRTFLAGHSEAFDPDEVRTLVAAFDKAWETIQASGVVYPEAKAETVRAILAKHIIAAAKNGERDHGRLRDGALLALAQS
Ga0134070_104422082	3300010301	Grasslands Soil	MRNLLAEYPAWFEPDEVQILVAAFDKAWETVQASVVIYPEAKAEAARAILAKHIIEAARQGERDHARLRDGALLALAQSNLRNSPPRPPR*
Ga0134063_101033112	3300010335	Grasslands Soil	MRTFLAEHSEAFDPDEVHTLVAAFDKAWETIQASGVVYPEAKAETVRAILAKHIIAAAKNGERDHGRLRDGALLALAQSNLRT*
Ga0134127_133587511	3300010399	Terrestrial Soil	MRNLRAEYPAWFEPDEVQILVGAFDKAWETVQASGVVYPEAKAEAVRAILAKHIIEAAKQGERDHTRLRDGAL
Ga0137392_102361012	3300011269	Vadose Zone Soil	MHGFLAEHSGAFTPDEVHTLVAAFDKAWETIQASGVVYPEAKAEAVRAILAKHIIEAAKQGERDHARLRDGALLALAQSNLRNAPPPPPR*
Ga0137392_111813011	3300011269	Vadose Zone Soil	MRDLLAWFDPDEVEILVAAFDKAWETVQASGVVYSEAKAEAVRAILAKHIIAAARDGELDYARLRDGALLALAQSNLSDISLKVMWKKQNF*
Ga0137391_102544012	3300011270	Vadose Zone Soil	MHGFLAEHSGAFTPDEVHTLVAAFDKAWGTIQASGVVYPEAKAEAVRAILAKHIIEAAKQGERDHARLRDGALLALAQSNLRNAPPPPPR*
Ga0137393_106914642	3300011271	Vadose Zone Soil	VGSREMRDLLAWFDPDEVEILVAAFDKAWETVQASGVVYSEAKAEAVRAILAKHIIAAARDGELDYARLRDGALLALAQSNLSDISLKVMWKKQ
Ga0137389_104553292	3300012096	Vadose Zone Soil	MHGFLAEHSGAFTPDEVHTLVAAFDKAWETIQASGVVYPEAKAEAVRAILAKHIIEAAKQCERDHAQLRDRALLALAQSNLRNAPPPPPR*
Ga0137389_109678311	3300012096	Vadose Zone Soil	MRNLLAEYPAWFEPDEVQILLAAFDKAWEAVQASSIRYPADKLESVRAILAKRIIAAAVDGERDLGRLRDGAL
Ga0137364_109521521	3300012198	Vadose Zone Soil	EPDEVQILVAAFDKAWETVQASGVIYPKAKAEAARAILAKHIIEAAKQGERDHARLRDGALLALRLTNLRNASHQPR*
Ga0137383_102703872	3300012199	Vadose Zone Soil	MRNLLAEYPAWFEPDEVQILVAAFDKAWETVQASGVVYSEAKAEAVRAILAKHIIAAARDGELDYARLRDGALLALAQSNLSSASTLQ*
Ga0137383_108782911	3300012199	Vadose Zone Soil	MRGLLAEHSGVFTPDEVRTLVVAFDKAWETIQASGVVYPEAKAEAARAILAKHIIATATNGERDHARLRDGALLALAQSNLRNSPPPPPR*
Ga0137383_113631551	3300012199	Vadose Zone Soil	ESVGSGEMRNLLAEYPAWFEPDEVQILLAAFDKAWEAVQASSIRYPADKLESVRAILAKRIIAAAVDGERDLGRLCDGALLALAQSNL*
Ga0137365_102236161	3300012201	Vadose Zone Soil	MRNLLAEYPAWFEPDEVQILVAAFDKAWETVQASVVIYPEAKAEAARAILAKHIIEAAKQGERDHARLRDGALLALRLTNLRNASHQPR*
Ga0137365_110142091	3300012201	Vadose Zone Soil	SPVGSGKMRNLLAEYPAWFEPDEVQILVGAFDKAWETVQASGVVYAEAKAEAVRAILAKHIIEAAKQGERDHTRLRDGALLALAQSNLRNSPPPHERRGDAMRYLDNRGKIS*
Ga0137363_101038531	3300012202	Vadose Zone Soil	MRDLLAWFDPDEVEILVAAFDKAWETVQASGVVYSEAKAEAVRAILAKHIIAAARDGERDYARLRDGALLALAQSNLSSASPLP*
Ga0137363_102440402	3300012202	Vadose Zone Soil	VGSREMRDLLAWFDPDEVEILVAAFDKAWETVQASGVVYSEAKAEAVRAILAKHIIAAARDGELDYARLRDGALLALAQSNLSDISLKVMWKKQNF*
Ga0137374_101798263	3300012204	Vadose Zone Soil	RLLPSPVGSGEMRNLLAEYPAWFEPDEVQILVAAFDKAWEAVQASSIRYPADKLESVRAILAKRIIAAAMDGERDLGRLCDGALLALAQSNL*
Ga0137374_102488984	3300012204	Vadose Zone Soil	MRGYLKDHVGVFEPDEVVILLAAFDKSWGAVQASGVRFPPDELEFVRAILAKHIVAAAMKGERDVGRLRDGALLALAQSNLRSGQA
Ga0137374_105478711	3300012204	Vadose Zone Soil	MRSLLAEYPAWFDPDEVQILLAAFDKAWEAVQASGVTYPADKIESVRTILSKHIIAAAMDGERDLGRLCDGALLALAQSNL*
Ga0137362_101126435	3300012205	Vadose Zone Soil	SREMRDLLAWFDPDEVEILVAAFDKAWETVQASGVVYSEAKAEAVRAILAKHIIAAARDGERDYARLRDGALLALAQSNLSSASPLP*
Ga0137362_106972442	3300012205	Vadose Zone Soil	MRNFLAEHSGAFDPNEVHTLVAAFDKAWEAVQASGVVYPEAKAEAARAILAKHIIAAAKHGERDHARLRDGALLALAQSNLRTAPDPLR*
Ga0137380_105405412	3300012206	Vadose Zone Soil	MRTFLAGHSEAFDPDEVHTLVAAFDKAWETIQASGLVYPEAKAETVRAILAKHIIAAAKNGERDHGRLRDGALLALAQSNLRT*
Ga0137381_117977141	3300012207	Vadose Zone Soil	MRNLLAEYPAWFEPDEVQILVAAFDKAWETVQASVVIYPEAKAEAARAILAKHIIEAAKQGERDHARLRDGALLALRHTNLRNASHQPR*
Ga0137376_101045853	3300012208	Vadose Zone Soil	MRNLLAEYPAWFEPDEVQILVGAFDKAWETVQATRVVYAEAEAEAVRTILAKHIIEAAKQGERDHARLRDGALLALAQSNLRNSPPPPPR*
Ga0137376_113962051	3300012208	Vadose Zone Soil	MRNFLAEHSGAFDPNEVHTLVAAFDKAWEAVQASGVVYPQAKAEAARAILAKHIIAAAMHGKRDQARLRDGALLALAQSNLR
Ga0137379_102553451	3300012209	Vadose Zone Soil	MRNLLAEYPAWFEPDEVQILVAAFDKAWETVQASPVIYPEAKAEAARAILAKHIIEAAKQGERDHARLRDGALL
Ga0137379_104905792	3300012209	Vadose Zone Soil	MRTFLAEHSEAFDPDEVHTLIAAFDKAWETIQASGVVYPEAKAETVRAILAKHIIAAAKNGERDHGRLRDGALLALAQSNLRT*
Ga0137378_100771081	3300012210	Vadose Zone Soil	MRNLLAEYPAWFEPDEVQILLAAFDKAWEAVQASSIRYPADKLESVRAILAKRIIAAAMDGERDLGRL
Ga0137378_105573941	3300012210	Vadose Zone Soil	LAEHSEAFNPDEVHTLIVASPEAKAEIVRAILAKHIIAAAKNGERDHGRLRDGALLALAQSNLRT*
Ga0137377_100723094	3300012211	Vadose Zone Soil	MRNLLAEYPAWFEPDEVQILVGAFDKAWETVQATGVAYAEAKAEAVRTILAKHIIEAAKQGERDHARLRDGALLALAQSNLRNSPPPPPR*
Ga0137377_102245815	3300012211	Vadose Zone Soil	DPDEVQILLAAFDKAWEAVQASGVTYPADKIESVRTILSKHIIAAAMSGERDLGRLRDGALLTLAQSNLRSGSASLLS*
Ga0137377_104562212	3300012211	Vadose Zone Soil	VGSREMRDLLAWFDPDEVEILVAAFDKAWETVQASGVVYSEAKAEAVRAILAKHIIAAARDGERDYARLRDGALLALAQSNLSSASPLP*
Ga0137377_117093811	3300012211	Vadose Zone Soil	NLLAEYPAWFEPDEVQILVAAFDKAWETVQASGVIYPKAKAEAARAILAKHIIEAAKQGERDHARLRDGALLALAQTNLRNASHQLR*
Ga0137377_118511341	3300012211	Vadose Zone Soil	SPVDSGEMRNLLAEYPAWFEPDEVQILLAAFDKAWEAVQASSIRYPADKLESVRAILAKRIIAAAMDGERDLGRLCDGALLALAQSNL*
Ga0137370_101172201	3300012285	Vadose Zone Soil	MRTFLAEHSEAFDPDEVHTLVAAFDKAWETIQASGVVYPEAKAETVRAILAKHIIAAAKNGERDHGRLRDGALLAL
Ga0137370_103537262	3300012285	Vadose Zone Soil	VEKSLPGGRIGEMRGFLKEHSGVFGPDEVHILLAAFDKAWEAVQASSIRYPADKLESVRAILAKRIIAAAMDGERDLGRLRDGALLALAQSNLRSGPASKLS*
Ga0137370_104888782	3300012285	Vadose Zone Soil	MRNLLAEYPAWFEPDEVQILVGAFDKAWETVQATGVVCAEAKAEAVRTILAKHIIEAAKQGERDHARLRDGALLALAQSNLRNSPPPPPR*
Ga0137387_108493991	3300012349	Vadose Zone Soil	VDSGEMRNLLAEYPAWFEPDEVQILLAAFDKAWEAVQASSIRYPADKLESVRAILAKRIIAAAIDGERDLGRLRDGALYSPWLNQIRSRP*
Ga0137372_102309211	3300012350	Vadose Zone Soil	MRNLLAEYPAWFEPDEVQILLVAFDKAWEAVQASSIRYPADKLESVRAILAKRIIAAAMDGERDLGRLRDGALLALAQSNL*
Ga0137372_103964502	3300012350	Vadose Zone Soil	GSDEVHILVAAFDKAWETVQASGVRYPEAKAEQVRAILAKHIIATAMNGERDLGRLRDGALLALAQSNLRSGSASLLS*
Ga0137386_101171034	3300012351	Vadose Zone Soil	MRNLLAEYPAWFEPNEVQILLAAFDKAWEAVQASSIRYPADKLESVRAILAKRIIAAAMDGERDLGRLRDGALLALAQSNL*
Ga0137366_101347861	3300012354	Vadose Zone Soil	MRNLLAEYPAWFEPDEVQILVAAFDKAWETVQTSVVIYPEAKAEAARAILAKHIIEAAKQGERDHARLRDGALLALRLTNLRNASHQPR*
Ga0137369_102965221	3300012355	Vadose Zone Soil	MRNLLAEYPAWFEPDEVQILVAAFDKAWETVQAGVVIYPEAKAEAARAILAKHIIEAAKQGERDHARLRDGALLALAQSNL*
Ga0137369_108880212	3300012355	Vadose Zone Soil	MRNLLAEYPAWFEPDEVQILVAAFDKAWEAVQASSIRYPADKLESVRAILAKRIIAAAMDGERDLGWLRDGALLALAQSTL*
Ga0137371_100505225	3300012356	Vadose Zone Soil	MRNLLAEYPAWFEPDEVQILVAAFDKAWETVQASPVIYPEAKAEAARAILAKHIIEAAKQGERDHARLRDGALLALRLTNLRNASHQPR*
Ga0137384_102185404	3300012357	Vadose Zone Soil	MRNLLAEYPAWFEPDEVQILLAAFDKAWEAVQASSIRYPADKLESVRAILAKRIIAAAMDGERDLGRVRDGALLALAQSNL*
Ga0137384_111873361	3300012357	Vadose Zone Soil	MRTFLAEHSEAFDPDEVHTLVAAFDKAWETIQASGVVYPKAKAEIVRAILARHIIAAAKKGERDHGRLRDGALLALAQSNLRT*
Ga0137368_101640933	3300012358	Vadose Zone Soil	MRNLLAEYPAWFEPDEVQILVAAFDKAWETVQTSVVIYPEAKAEAARAILAKHIRAILAKHIIEAAKQGERDHARLRDGALLALRLTNLRNASHQPR*
Ga0137368_102656732	3300012358	Vadose Zone Soil	MRNLLAEYPAWFEPDEVQILLAAFDKAWEAVQASSIRYPADKLESVRAILAKRIIAAAMDGERDLGRLCDGALLALAQSNL*
Ga0137385_103764771	3300012359	Vadose Zone Soil	PSPVDSGEMRNLLAEYPAWFEPDEVQILVAAFDKAWETVQASVVIYPEAKAEAARAILAKHIIEAAKQGERDHARLRDGALLALRLTNLRNASHQPR*
Ga0137385_107692121	3300012359	Vadose Zone Soil	VDSGEMRNLLAEYPAWFEPDEVQILLVAFDKAWEAVQASSIRYPADKLESVRAILAKRIIAAAVDGERDLGRLRDGALYSPWLNQIRSRP*
Ga0137385_107834891	3300012359	Vadose Zone Soil	MRTFLAEHSEAFNPDEVHTLIVAFDRAWETIQASGVVYPEAKAETVRAILAKHIIAAAKNGERDHGRLRDGALLALAQSNLRT*
Ga0137360_101294913	3300012361	Vadose Zone Soil	MRNLLAEYPAWFEPDEVQILLPAFDKAWEAVQASSIRYPADKLESVRAILAKRIIAAAMDGERDLGRLRDGALLALAQSNP*
Ga0137360_108577762	3300012361	Vadose Zone Soil	MRDLLAEYRAWFEPDEVQILVAAFDKAWETVQASGMVYTEANAEAVRAILAKHIIEAARQGERDHTRLRDGALLALAQSNLRNSPPPPPR*
Ga0137360_112533451	3300012361	Vadose Zone Soil	SGEMRNLLAEYPAWFEPDEVQILVAAFDKAWETVQASVVIYPEAKAEAARAILAKHIIEAAKQGERDHARLRDGALLALRLTNLRNASHQPR*
Ga0137360_112952431	3300012361	Vadose Zone Soil	MRNFLAEHSGAFDPNEVDTLVAAFDKAWEAVQASGVVYPEAKAEAARAILAKHIIAAAMHGERDHDGALLALAQSNLRTAPDPR*
Ga0137361_105248352	3300012362	Vadose Zone Soil	MKMRNLLAEYPAWFEPDEVQIFVAAFDDAWEAVQASGVIYPEATAKAARAILAKHIIEAAKQGERDHARLRDGALAALARSNLRSGPASQLR*
Ga0137361_107128162	3300012362	Vadose Zone Soil	SPVGSREMRDLLAWFDPDEVEILVAAFDKAWETVQASGVVYSEAKAEAVRAILAKHIIAAARDGELDYARLRDGALLALAQSNLSDISLKVMWKKQNF*
Ga0137361_111197211	3300012362	Vadose Zone Soil	PVDSGEMRNLLAEYPAWFEPDEVQILLAAFDKAWEAVQASSIRYPADKLESVRAILAKRIIAAAMDGERDLDRLRDGALLALAQSNL*
Ga0137373_102541082	3300012532	Vadose Zone Soil	VDSGEMRNLLAEYPAWFEPDEVQILLAAFDKAWEAVQASSIRYPADKLESVRAILAKRIIAAAMDGERDLGWLRDGALLALAQSNL*
Ga0137395_105285562	3300012917	Vadose Zone Soil	MRDLLAWFDPDEVEILIAAFDKAWETVQASGVVYSEAKAEAVRAILAKHIIAAARDGELDYARLRDGALLALAQSNLSSASPLP*
Ga0137359_102324081	3300012923	Vadose Zone Soil	MRNFLAEQSEAFDPNEVHTLVAAFDKAWEAVQASGVVYPEAKAEAARAILAKHIIAAAKHGERDHARLRDGALLALAQSNLQT
Ga0137359_104190022	3300012923	Vadose Zone Soil	MKMRNLLAEYPAWFEPDEVQIFVAAFDDAWEAVQASGVIYPEATAKAARAILAKHIIEAAKQGERDHARLRDGALAALARS
Ga0137359_106310111	3300012923	Vadose Zone Soil	MRNLLAEYPAWFEPDEVQILLPAFDKAWEAVQASSIRYPADKLESVRAILAKRIIAAAVDGERDLGRLRDGALLALAQSNP*
Ga0137404_109821562	3300012929	Vadose Zone Soil	MRTFLAENSEAFDPDEVHTLVAAFDKAWETIQASGVVYPEAKAETVRAILAKHIIAAAKNGERDHGRLRDGALLALAQSNLRT*
Ga0137407_111946041	3300012930	Vadose Zone Soil	VGSGEIRNLLAEYPGWFEPDEVQILVAAFDKAWETVQASGIVYTKANAEAVRAILAKHIIEAARQDERDHTRLRDGALLALAQSNLRNSPPPPPR*
Ga0137407_120798212	3300012930	Vadose Zone Soil	AEYPAWFEPDEVQILLAAFDKAWEAVQASSIRYPADKLESVRAILAKRIIAAAVDGERDLGRLRDGALLALAQSNL*
Ga0164303_112778471	3300012957	Soil	MRNFLAEHSGAFDANEVDTLVAAFDKAWEAVQASGVVYPQAKAEAARAILAKHIIAAAMHGERDHARLRDGALLALAQSNLRTTPDPL
Ga0164302_112664852	3300012961	Soil	PDEVQFLVAAFDKAWETVQASGVVYPEAKAEAVRAILAKHIIEAAKQGERDHTRLRDGALLALAQSNLRNSPPPPPR*
Ga0164309_106001122	3300012984	Soil	MRDLLAEYPAWFEPDEVQILVAAFDKAWETVQASGVVYPEAKAEAVRAILAKHIIEAAKQGERDHTRLRDGALLALAQSNLRNSPPPPPR*
Ga0164308_106094202	3300012985	Soil	MRNLLAEYPAWFEPDEVQILVAAFDKAWETVQASGVVYPEAKAEAVRAILAKHIIEAAKQGERDHTRLRDGALLALAQS
Ga0164305_103122352	3300012989	Soil	MRNLLAEYPAWFEPDEVQILVAAFEKAWGTVQASGVVYPEAKAEAVRAILAKHIIEAAKQGERDHTRLRDGALLALAQS
Ga0132257_1031833462	3300015373	Arabidopsis Rhizosphere	PVGSGEMRNLLAEYPAWFEPDEVQILVGAFYKAWETVQATGVVYAEAKAEAVRTILAKHIIEAAEQGERDHTRLRDGALLALAQSNLRNAPPPPPR*
Ga0134074_11624902	3300017657	Grasslands Soil	MRTFLAEHSEAFDPDEVHTLLAAFDKAWETIQASGVVYPEAKAETVRAILAKHIIAAAKNGERDHGRLRDGALLALAQSNLQT
Ga0066655_108835711	3300018431	Grasslands Soil	MRNLLAEYPAWFEPDEVQILLAAFDKAWEAVQASSIRYPADKLESVRAILAKRIIAAAVDGERDLGRLRDGALLALAQSNP
Ga0066667_106807952	3300018433	Grasslands Soil	PAWFEPDEVQILLAAFDKAWEAVQASSIRYPADKLESVRAILAKRIIAAAVDGERDLGRLRDGALLALAQSNP
Ga0066662_110365602	3300018468	Grasslands Soil	MRNLLAEYPAWFEPDEVQILLAAFDKAWEAVQASSIRYPADKLESVRAILAKRIIAAAVDGERDLGRLRDGALLALAQSNL
Ga0210407_104246391	3300020579	Soil	YLRAEYPAWFEPDEVQFLVAAFDKAWETVQASGVVYPEAKAEAVRAILAKHIIEAAKQGERDHTRLRDGALLALAQSNLRNSPPPPPR
Ga0210406_109643082	3300021168	Soil	MRDLLAEYPAWFEPDEVQILVAAFDKAWETVQASGMVYAEANAEAVRAILAKHIIEAARQGERDHTRLRDGALLALAQSNLRNSPPPPPR
Ga0242654_103636792	3300022726	Soil	GKMRNLLAEYPAWFEPDEVQILVAAFDKAWETVQASGVVYPEAKAEAVRAILAKHIIEAAKQGERDHTRLRDGALLALAQSNLRNSPPPPPR
Ga0207665_112281851	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MRNLLAEYPAWFEPDEVQILVGAFDKAWETVQASGVVYPEAKAEAVRAILAKHIIEAAKQGERDHTRLRDGALLALAQSNLR
Ga0209240_10021681	3300026304	Grasslands Soil	MRDLLAWFDPDEVEILVAAFDKAWETVQASGVVYSEAKAEAVRAILAKHIIAAARDGELDYARLRDGALLALAQSNLSDISLKVMWKKQNF
Ga0209154_10808622	3300026317	Soil	MRNLLAEYPAWFEPDEVQILLAAFDKAWEAVQASSIRYPADKLESVRAILAKRIIAAAVDGERHLGRLRDGALLALAQSNP
Ga0209647_10916902	3300026319	Grasslands Soil	MRNLLAEYPAWFEPDEVQILLAAFDKAWEAVQASSIRYPADKLESVRAILAKRIIAAAMDGERDLDRLRDGALLALAQSNL
Ga0257180_10521391	3300026354	Soil	MRDLLAWFDPDEVEILIAAFDKAWETVQASGVVYPEAKAEAARAILAKHIIAAARDGERDYARLRDGALLALAQSNLSSASPLP
Ga0257159_10452192	3300026494	Soil	MRDLLAEYPAWFEPGEVQILVAAFDKAWETVQASGMVYTKANAEAVRAILAKHIIEAARQGERDHTRLRDGALLALAQSNLRNSPPPPPR
Ga0257156_10255203	3300026498	Soil	MRDLLAWLDPDEVEILVAAFDKAWETVQASGVVYSEAKAEAVRAILAKHIIAAARDGELDYARLRDGALLALAQSNLSSASPLP
Ga0209160_11414331	3300026532	Soil	MRNLLAEYPAWFEPDEVQILLAAFDKAWGAVQASSIRYPADKLESVRAILAKRIIAAAVDGERDLGRLRDGALLALAQSNP
Ga0179587_107842531	3300026557	Vadose Zone Soil	MRDLLAWFDPDEVEILVAAFDKAWETVQASGVVYSEAKAEAVRAILAKHIIAAARDGERDYARLRDGALLALAQSNLSSASPLP
Ga0209523_10733672	3300027548	Forest Soil	MRNLLAEYPAWFEPDEVQILVAAFDKAWETVQASGVIYPKAKAEAARAILAKHIIEAAKQGERDHARLRDGALLALAQTNLRNASHQLR
Ga0137415_102603142	3300028536	Vadose Zone Soil	MRNLLAEYPAWFEPDEVQILLAAFDNAWEAVQASSIRYPADKLESVRAILAKRIIAAAVDGERDLGRLRDGALLALAQSNP
Ga0307277_102872972	3300028881	Soil	MLGFLKEHSGVFDLDEIRTLAAAFDKAWQTAQASGVVYPEAQAEAAREILAKYIIAAAMDGERDCARLRDGALLALAQSNLRTATRPQR
Ga0307469_121556291	3300031720	Hardwood Forest Soil	ELSARFLQSPVGTGKMRNLLAEYPAWFEPDEVQILVAAFDKAWETVQASGVIYPKAKAEAARAILAKHIIEAAKQGERDHARLRDGALLALAQTNLRNASHQQR
Ga0307471_1005409822	3300032180	Hardwood Forest Soil	MRDLLAWLDPDEVEILVAAFDKAWETVQASGVVYSEAKAEAVRAILAKHIIAAARDSEVDYARLRDGALLALAQSNLSSASPLP
Ga0307471_1038303322	3300032180	Hardwood Forest Soil	MRDLLARFDPDEVQILVAAFDKAWETVQASGVIYPEAKAKAARAILAKHIIEAAKQGERDHARLRDGALLALAQANLGNASDQRR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F051434

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences