Metagenome Family F051498

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F051498
Family Type	Metagenome
Number of Sequences	144
Average Sequence Length	47 residues
Representative Sequence	MKTRVEKQGPGSWVVFVNGQRHHEIFLTRAAARREAKRQKETNKIDNQS
Number of Associated Samples	81
Number of Associated Scaffolds	144

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	67.94 %
% of genes near scaffold ends (potentially truncated)	40.97 %
% of genes from short scaffolds (< 2000 bps)	81.25 %
Associated GOLD sequencing projects	70
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.69

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (80.556 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (32.639 % of family members)
Environment Ontology (ENVO)	Unclassified (46.528 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (79.167 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 25.97% β-sheet: 25.97% Coil/Unstructured: 48.05%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.69
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.69
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 144 Family Scaffolds
PF00589	Phage_integrase	2.78
PF00999	Na_H_Exchanger	2.08
PF04226	Transgly_assoc	1.39
PF08734	GYD	1.39
PF03401	TctC	0.69
PF00027	cNMP_binding	0.69
PF13289	SIR2_2	0.69
PF04392	ABC_sub_bind	0.69
PF13432	TPR_16	0.69
PF00300	His_Phos_1	0.69
PF08530	PepX_C	0.69
PF11953	DUF3470	0.69
PF00872	Transposase_mut	0.69
PF03992	ABM	0.69
PF09140	MipZ	0.69
PF09361	Phasin_2	0.69
PF04519	Bactofilin	0.69
PF00226	DnaJ	0.69

COG ID	Name	Functional Category	% Frequency in 144 Family Scaffolds
COG3263	NhaP-type Na+/H+ and K+/H+ antiporter with C-terminal TrkAC and CorC domains	Energy production and conversion [C]	2.08
COG4651	Predicted Kef-type K+ transport protein, K+/H+ antiporter domain	Inorganic ion transport and metabolism [P]	2.08
COG0025	NhaP-type Na+/H+ or K+/H+ antiporter	Inorganic ion transport and metabolism [P]	2.08
COG0475	Kef-type K+ transport system, membrane component KefB	Inorganic ion transport and metabolism [P]	2.08
COG3004	Na+/H+ antiporter NhaA	Energy production and conversion [C]	2.08
COG4274	Uncharacterized conserved protein, contains GYD domain	Function unknown [S]	1.39
COG2261	Uncharacterized membrane protein YeaQ/YmgE, transglycosylase-associated protein family	General function prediction only [R]	1.39
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	0.69
COG3328	Transposase (or an inactivated derivative)	Mobilome: prophages, transposons [X]	0.69
COG1192	ParA-like ATPase involved in chromosome/plasmid partitioning or cellulose biosynthesis protein BcsQ	Cell cycle control, cell division, chromosome partitioning [D]	0.69
COG1664	Cytoskeletal protein CcmA, bactofilin family	Cytoskeleton [Z]	0.69
COG2936	Predicted acyl esterase	General function prediction only [R]	0.69
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	0.69

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	80.56 %
All Organisms	root	All Organisms	19.44 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	80.56 %
cellular organisms	root	All Organisms → cellular organisms	19.44 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	80.56 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	19.44 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	80.56 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	9.72 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1.39 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	1.39 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	80.56 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	9.03 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	1.39 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1.39 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	80.56 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4.86 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	2.08 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.39 %
Anaerolineae	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae	0.69 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	80.56 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2.78 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2.08 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.39 %
unclassified Anaerolineae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae	0.69 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	80.56 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2.08 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.39 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.39 %
Anaerolineae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium	0.69 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.69 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2070309004\|prs_FHA1B5K04XD7JQ	Not Available	570	Open in IMG/M
3300001619\|JGI20250J16331_103328	Not Available	633	Open in IMG/M
3300004633\|Ga0066395_10683136	Not Available	608	Open in IMG/M
3300005179\|Ga0066684_10136129	Not Available	1545	Open in IMG/M
3300005187\|Ga0066675_10892726	Not Available	672	Open in IMG/M
3300005332\|Ga0066388_100263842	Not Available	2363	Open in IMG/M
3300005332\|Ga0066388_100422492	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1976	Open in IMG/M
3300005332\|Ga0066388_100565436	All Organisms → cellular organisms → Bacteria	1764	Open in IMG/M
3300005332\|Ga0066388_100629282	Not Available	1691	Open in IMG/M
3300005332\|Ga0066388_101246367	Not Available	1276	Open in IMG/M
3300005332\|Ga0066388_101350884	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1233	Open in IMG/M
3300005332\|Ga0066388_101505194	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1177	Open in IMG/M
3300005332\|Ga0066388_101544218	Not Available	1164	Open in IMG/M
3300005332\|Ga0066388_102107055	Not Available	1015	Open in IMG/M
3300005332\|Ga0066388_107117756	Not Available	562	Open in IMG/M
3300005436\|Ga0070713_100341623	Not Available	1387	Open in IMG/M
3300005518\|Ga0070699_100875867	Not Available	822	Open in IMG/M
3300005560\|Ga0066670_10208583	Not Available	1175	Open in IMG/M
3300005569\|Ga0066705_10697724	Not Available	612	Open in IMG/M
3300005764\|Ga0066903_100107114	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3810	Open in IMG/M
3300005764\|Ga0066903_100957222	All Organisms → cellular organisms → Bacteria	1558	Open in IMG/M
3300005764\|Ga0066903_102618894	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	978	Open in IMG/M
3300005764\|Ga0066903_103572871	Not Available	837	Open in IMG/M
3300005764\|Ga0066903_104183755	Not Available	772	Open in IMG/M
3300005764\|Ga0066903_104201553	Not Available	771	Open in IMG/M
3300005764\|Ga0066903_106523646	Not Available	608	Open in IMG/M
3300005764\|Ga0066903_106553541	Not Available	606	Open in IMG/M
3300005764\|Ga0066903_107797686	Not Available	550	Open in IMG/M
3300006102\|Ga0075015_100581854	Not Available	653	Open in IMG/M
3300006162\|Ga0075030_101021768	Not Available	651	Open in IMG/M
3300006163\|Ga0070715_10670912	Not Available	616	Open in IMG/M
3300006174\|Ga0075014_100674723	Not Available	598	Open in IMG/M
3300006755\|Ga0079222_11731599	Not Available	601	Open in IMG/M
3300006806\|Ga0079220_11290225	Not Available	611	Open in IMG/M
3300006954\|Ga0079219_10054153	Not Available	1746	Open in IMG/M
3300009792\|Ga0126374_10659026	Not Available	781	Open in IMG/M
3300010047\|Ga0126382_11731252	Not Available	585	Open in IMG/M
3300010048\|Ga0126373_10334308	Not Available	1522	Open in IMG/M
3300010048\|Ga0126373_10454805	Not Available	1316	Open in IMG/M
3300010048\|Ga0126373_13141071	Not Available	514	Open in IMG/M
3300010303\|Ga0134082_10342512	Not Available	632	Open in IMG/M
3300010358\|Ga0126370_11167722	Not Available	714	Open in IMG/M
3300010361\|Ga0126378_10680394	Not Available	1141	Open in IMG/M
3300010361\|Ga0126378_11389139	Not Available	795	Open in IMG/M
3300010361\|Ga0126378_13199348	Not Available	521	Open in IMG/M
3300010376\|Ga0126381_100470927	Not Available	1765	Open in IMG/M
3300010376\|Ga0126381_101439615	Not Available	996	Open in IMG/M
3300010376\|Ga0126381_102351887	Not Available	765	Open in IMG/M
3300010376\|Ga0126381_103423005	Not Available	624	Open in IMG/M
3300010376\|Ga0126381_103848822	Not Available	586	Open in IMG/M
3300010398\|Ga0126383_12393243	Not Available	613	Open in IMG/M
3300010863\|Ga0124850_1089731	Not Available	893	Open in IMG/M
3300012971\|Ga0126369_13582602	Not Available	509	Open in IMG/M
3300016270\|Ga0182036_10115645	All Organisms → cellular organisms → Bacteria	1851	Open in IMG/M
3300016270\|Ga0182036_10303035	Not Available	1216	Open in IMG/M
3300016270\|Ga0182036_10445808	Not Available	1017	Open in IMG/M
3300016294\|Ga0182041_10538297	Not Available	1018	Open in IMG/M
3300016294\|Ga0182041_10777236	Not Available	854	Open in IMG/M
3300016294\|Ga0182041_10834437	Not Available	825	Open in IMG/M
3300016294\|Ga0182041_11455460	Not Available	630	Open in IMG/M
3300016294\|Ga0182041_12206859	Not Available	514	Open in IMG/M
3300016319\|Ga0182033_11137316	Not Available	698	Open in IMG/M
3300016319\|Ga0182033_11211137	Not Available	677	Open in IMG/M
3300016341\|Ga0182035_11550781	Not Available	597	Open in IMG/M
3300016357\|Ga0182032_10166419	Not Available	1647	Open in IMG/M
3300016371\|Ga0182034_10132188	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1846	Open in IMG/M
3300016371\|Ga0182034_11662571	Not Available	561	Open in IMG/M
3300016387\|Ga0182040_10107994	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1904	Open in IMG/M
3300016404\|Ga0182037_10277079	Not Available	1338	Open in IMG/M
3300016404\|Ga0182037_11942527	Not Available	527	Open in IMG/M
3300016422\|Ga0182039_10463552	Not Available	1088	Open in IMG/M
3300016422\|Ga0182039_11191936	Not Available	688	Open in IMG/M
3300016422\|Ga0182039_11990466	Not Available	534	Open in IMG/M
3300016422\|Ga0182039_12202752	Not Available	508	Open in IMG/M
3300016445\|Ga0182038_11802384	Not Available	552	Open in IMG/M
3300017955\|Ga0187817_10071936	Not Available	2153	Open in IMG/M
3300017961\|Ga0187778_10574216	Not Available	754	Open in IMG/M
3300017973\|Ga0187780_10449641	Not Available	917	Open in IMG/M
3300018058\|Ga0187766_10708014	Not Available	696	Open in IMG/M
3300018482\|Ga0066669_10157362	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium	1681	Open in IMG/M
3300020580\|Ga0210403_10476074	Not Available	1016	Open in IMG/M
3300020581\|Ga0210399_10770069	Not Available	787	Open in IMG/M
3300021560\|Ga0126371_10096822	Not Available	2931	Open in IMG/M
3300021560\|Ga0126371_10415215	Not Available	1489	Open in IMG/M
3300021560\|Ga0126371_13687283	Not Available	517	Open in IMG/M
3300025928\|Ga0207700_10678953	Not Available	919	Open in IMG/M
3300027049\|Ga0207806_1025760	Not Available	677	Open in IMG/M
3300027070\|Ga0208365_1022822	All Organisms → cellular organisms → Bacteria	810	Open in IMG/M
3300027330\|Ga0207777_1072254	All Organisms → cellular organisms → Bacteria	603	Open in IMG/M
3300027371\|Ga0209418_1060668	Not Available	674	Open in IMG/M
3300027703\|Ga0207862_1000723	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	10128	Open in IMG/M
3300027703\|Ga0207862_1023073	Not Available	1861	Open in IMG/M
3300031545\|Ga0318541_10158715	All Organisms → cellular organisms → Bacteria	1244	Open in IMG/M
3300031564\|Ga0318573_10097834	All Organisms → cellular organisms → Bacteria	1503	Open in IMG/M
3300031573\|Ga0310915_10000433	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	20113	Open in IMG/M
3300031573\|Ga0310915_10116322	Not Available	1822	Open in IMG/M
3300031668\|Ga0318542_10401351	Not Available	708	Open in IMG/M
3300031680\|Ga0318574_10501817	Not Available	711	Open in IMG/M
3300031744\|Ga0306918_11142489	Not Available	602	Open in IMG/M
3300031753\|Ga0307477_10044128	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	3063	Open in IMG/M
3300031781\|Ga0318547_10335620	Not Available	922	Open in IMG/M
3300031833\|Ga0310917_10924938	Not Available	586	Open in IMG/M
3300031833\|Ga0310917_11181505	Not Available	509	Open in IMG/M
3300031879\|Ga0306919_10064406	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2475	Open in IMG/M
3300031879\|Ga0306919_10988400	Not Available	644	Open in IMG/M
3300031890\|Ga0306925_10038215	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4948	Open in IMG/M
3300031890\|Ga0306925_10174449	Not Available	2316	Open in IMG/M
3300031910\|Ga0306923_10120790	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2972	Open in IMG/M
3300031910\|Ga0306923_10387091	Not Available	1592	Open in IMG/M
3300031912\|Ga0306921_10176419	All Organisms → cellular organisms → Bacteria	2504	Open in IMG/M
3300031912\|Ga0306921_10715848	Not Available	1149	Open in IMG/M
3300031941\|Ga0310912_10302822	Not Available	1237	Open in IMG/M
3300031942\|Ga0310916_10060954	All Organisms → cellular organisms → Bacteria	2919	Open in IMG/M
3300031942\|Ga0310916_11157416	Not Available	641	Open in IMG/M
3300031945\|Ga0310913_10687012	Not Available	724	Open in IMG/M
3300031946\|Ga0310910_10719824	Not Available	788	Open in IMG/M
3300031946\|Ga0310910_10872211	Not Available	707	Open in IMG/M
3300031947\|Ga0310909_10673286	Not Available	861	Open in IMG/M
3300031954\|Ga0306926_10329038	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1890	Open in IMG/M
3300031954\|Ga0306926_11297716	Not Available	850	Open in IMG/M
3300031954\|Ga0306926_12678218	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	542	Open in IMG/M
3300031954\|Ga0306926_12751643	Not Available	533	Open in IMG/M
3300031954\|Ga0306926_12962659	Not Available	508	Open in IMG/M
3300032060\|Ga0318505_10559488	Not Available	538	Open in IMG/M
3300032076\|Ga0306924_11176086	All Organisms → cellular organisms → Bacteria	831	Open in IMG/M
3300032094\|Ga0318540_10593721	Not Available	533	Open in IMG/M
3300032205\|Ga0307472_101342027	Not Available	691	Open in IMG/M
3300032261\|Ga0306920_100082147	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4741	Open in IMG/M
3300032261\|Ga0306920_100470666	All Organisms → cellular organisms → Bacteria → Proteobacteria	1866	Open in IMG/M
3300032261\|Ga0306920_102889951	Not Available	652	Open in IMG/M
3300033289\|Ga0310914_11762918	Not Available	523	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	97.22%
Aquatic	Environmental → Aquatic	2.78%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	97.22%
Sediment	Environmental → Aquatic → Sediment	2.08%
Freshwater	Environmental → Aquatic → Freshwater	0.69%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	70.83%
Loam	Environmental → Terrestrial → Soil → Loam	24.31%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.08%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.08%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.69%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	49.31%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	21.53%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	15.28%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.47%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.78%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.08%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.08%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.08%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.69%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.69%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	32.64%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	19.44%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	15.28%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	14.58%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.78%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.78%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	2.08%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	2.08%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	2.08%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.08%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.39%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.69%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.69%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.69%
Green-Waste Compost	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Green-Waste Compost	0.69%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2070309004	Green-waste compost microbial communities at University of California, Davis, USA, from solid state bioreactor - Luquillo Rain Forest, Puerto Rico	Environmental	Open in IMG/M
3300001619	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF016	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119	Environmental	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006102	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2013	Environmental	Open in IMG/M
3300006162	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006174	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010303	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010863	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (PacBio error correction)	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017961	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MG	Environmental	Open in IMG/M
3300017973	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MG	Environmental	Open in IMG/M
3300018058	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MG	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300027049	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 72 (SPAdes)	Environmental	Open in IMG/M
3300027070	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF004 (SPAdes)	Environmental	Open in IMG/M
3300027330	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 35 (SPAdes)	Environmental	Open in IMG/M
3300027371	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027680	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 80 (SPAdes)	Environmental	Open in IMG/M
3300027703	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 81 (SPAdes)	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032060	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032094	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
prs_01498040	2070309004	Green-Waste Compost	MNTRVEKLGPGSWALFVNGQRHHELFLTRAAARTEAKRQKETNKINNES
JGI20250J16331_1033282	3300001619	Forest Soil	MNTRVEKQGPGSWVVFVNGQRHHEIFLTRAAARREAKRQKDKIDNES*
Ga0066395_106831361	3300004633	Tropical Forest Soil	MKTKVVKLGPGSWAVFVNDQRHHELFLTRSAARSEAKRQNEANKNDNES*
Ga0066684_101361292	3300005179	Soil	MKAKVEKLGQGSWAVLVNGQRHHETFRTRAAARNEAKRHEEADKINNES*
Ga0066675_108927261	3300005187	Soil	MKAKVEKLGQGSWAVLVNGQRHHETFRTRAAARREAKRHEEANKIDNES*
Ga0066388_1002638422	3300005332	Tropical Forest Soil	MKTRIEKQGPGSWVVFVDGQRHHEIFRTRAAARREAKRQTEVDKIDNES*
Ga0066388_1004224921	3300005332	Tropical Forest Soil	MKTKVVKLGPGSWAVFVNDQRHHELFLTRAAARKEAKRQNEANKIGNES*
Ga0066388_1005654361	3300005332	Tropical Forest Soil	QTMKTRVEKQGPGSWVVFVNGQRHHEIFLTRSAARREAKRQKEADKIDNES*
Ga0066388_1006292822	3300005332	Tropical Forest Soil	MTTKVEKLGPGSWAVFVNGQRHHELFATRSAARREAKRQKEANKIDTQS*
Ga0066388_1012463672	3300005332	Tropical Forest Soil	MKTKVVKLEPGSWAVFVNGQRHHELFLTRAAARREAKRQNETNKIDNEG*
Ga0066388_1013508842	3300005332	Tropical Forest Soil	METKVEKLGPGSWAVFVDGQRHHETFRARAAARREAKRQEEADKIDSES*
Ga0066388_1015051941	3300005332	Tropical Forest Soil	TRVEKQGPGSWVVFVNGQRHHETFLTRAAARREAKRQKENQQDRQ*
Ga0066388_1015442182	3300005332	Tropical Forest Soil	MKTRVEKLGPQSWVVFVNGQRHHETFLTRAAARREAKRQKETNKIDNQS*
Ga0066388_1021070551	3300005332	Tropical Forest Soil	MKTRVEKQGPGSWVVFVNGQRHHEIFLTRAAARREAKRQKETNKIDNQS*
Ga0066388_1071177562	3300005332	Tropical Forest Soil	MKTRVEKQGPGSWVVFVNGQRHDETFLTRAAARREAKRQSEANKIDNES*
Ga0070713_1003416232	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MKTKVEKLGPGSWAVFVDGQCHHEIFVTRAAARREGNNKHREADKIDNES*
Ga0070699_1008758673	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MKTRVEKLGPGSWVVFVNGQRHHETFLTRSAARKEASKQRETNKIDNES*
Ga0066670_102085831	3300005560	Soil	MKAKVEKIGPGSWAVIVNGQRHHETFRTRAAARNEAKRHEEADKINNES*
Ga0066705_106977242	3300005569	Soil	MKAKVEKLGQGSWAVIVNGQRHHETFRTRAAARNEAKRHE
Ga0066903_1001071141	3300005764	Tropical Forest Soil	MKTTVVKLGPGSWAVYVNDQRHHELFRTRAAARSEAKSQGEADTMDNKS*
Ga0066903_1009572223	3300005764	Tropical Forest Soil	VEPQSQGYQETMNTRVEKQGPGSWVVFVNGQPHHETFLTRAAARREAKRQQEANKIDSES
Ga0066903_1023583022	3300005764	Tropical Forest Soil	GSWAVFVNDQRHHELFLTRAAARKEAKRHTETDKVENEVRA*
Ga0066903_1026188941	3300005764	Tropical Forest Soil	MKTRVVKLGPGSWAVFVNDQRHHELFLTRAAARSEAKRQNEASKINNES*
Ga0066903_1035728711	3300005764	Tropical Forest Soil	KLGPGSWVVFVNGQRHHEIFRTRAAARREAKRQTEADKIDNES*
Ga0066903_1041837552	3300005764	Tropical Forest Soil	MKTRVVKLGPGSWAVFVNDQRHHELFLTRAAARREAKRQNEADKIDNKS*
Ga0066903_1042015532	3300005764	Tropical Forest Soil	MKTSVVKLGPGSWAVFVNGQRHHELFFTRAAARREAKRQNEADKIDNKS*
Ga0066903_1046694823	3300005764	Tropical Forest Soil	FVNGQRHHETFLTRAAARREAKRQKETNKIDNES*
Ga0066903_1065236461	3300005764	Tropical Forest Soil	MKTRVVKLGRGSWAVFVNEQRHHELFLTRSAARSEAKRQ
Ga0066903_1065535411	3300005764	Tropical Forest Soil	MKTSVVKLGPGSWAVFVNGQRHHELFLTRAAARSEAKRQTEANKTNNKR*
Ga0066903_1077976862	3300005764	Tropical Forest Soil	VKLGPGSWAVFVNGQRHHELFFTRSAARREAKRQNEADKVDNKS*
Ga0075015_1005818541	3300006102	Watersheds	METRVEKAGPGSWVVFVNGQRHQETFITRAAARIEAKRQKETNKIDNES*
Ga0075030_1010217682	3300006162	Watersheds	MKTRVEKLGPGSWAIFVNGQRHHEVFLTRAAARREAKRQTEANKIDNQS*
Ga0070715_106709121	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	MKTKVEKLGPGSWVVFVNGQRHDEIFVTRAAARREASKQKETKINNES*
Ga0075014_1006747232	3300006174	Watersheds	MKTRVEKLGPGSWAIFVNGQRHHEIFRTRAAARREAKRQTEANKIDNQS*
Ga0079222_117315991	3300006755	Agricultural Soil	MKTRVEKQGPGSWVVFVNGQRHHEIFLTRSAARTEAK
Ga0079220_112902251	3300006806	Agricultural Soil	MKTRVEKLGPGSWAVFVNGQRHQETFRTRAAARREAKRQTQADKIDNES*
Ga0079219_100541532	3300006954	Agricultural Soil	MKTKVEKLGPGSWAVFVDGQCHHEIFVTRAAARREANNKHREADKIDNES*
Ga0126374_106590262	3300009792	Tropical Forest Soil	MKTRVEKLGPGAWAISVNGQRQHETFLTRAAARREAKRQEEADKIGNES*
Ga0126382_117312521	3300010047	Tropical Forest Soil	MKTRVEKQGPGSWVVFVNGQRHDETFLTRAAARREAKRQSEAN
Ga0126373_103343082	3300010048	Tropical Forest Soil	MNTKVEKLGPGSWALFVNGQRYHELFLTRAAARREAKSQKEANKIDNKS*
Ga0126373_104548051	3300010048	Tropical Forest Soil	MKTSVVKLGPGSWAVFVNGQRHHELFLTRAAARREAKRQTEADKIDNKS*
Ga0126373_131410711	3300010048	Tropical Forest Soil	YNPHKVSQTMETRVEKAGPGSWVIFVNGQRHQETFTTRAAARIEAKRQKETNKIDES*
Ga0134082_103425121	3300010303	Grasslands Soil	MKTRVEKLGTGSWAVFVNGQRHHETFRTRAAARSEAKR
Ga0126370_111677221	3300010358	Tropical Forest Soil	MKTRVVKLGPGSWAVFVNDQRHHELFLTRAAARKEAKRHTETDKVENEVGA*
Ga0126378_106803941	3300010361	Tropical Forest Soil	MKTRVVKLGPGSWAVFVNDQRHHELFLTRAAARKEAKRHTETDKVENEVRA*
Ga0126378_113891391	3300010361	Tropical Forest Soil	MKTRIEKQGPGSWVVFVDGQRHHEIFRTRAAARREAKRQTEANKIDNES*
Ga0126378_131993482	3300010361	Tropical Forest Soil	EKQGPGSWVVFVNGQRHHEIFLTRAAARREARRQKEANKIDNQS*
Ga0126379_131856022	3300010366	Tropical Forest Soil	AVFVNEQRHHELFLTRAAARNEAKKQNEGDKIDNKS*
Ga0126381_1004709273	3300010376	Tropical Forest Soil	EKLGPGSWALFVNGQRYHELFLTRAAARREAKSQKEANKIDNKS*
Ga0126381_1014396152	3300010376	Tropical Forest Soil	MKTKVVKLGPGSWAVFVNDQRHHEIFLSRAAARREAKSQKEANKIDNKS*
Ga0126381_1023518872	3300010376	Tropical Forest Soil	REPQFLSEVQMKTRVVKLGPGSWAVFVNDQRHHELFLTRAAARREAKRQTEADKIGNES*
Ga0126381_1034230051	3300010376	Tropical Forest Soil	MKTKVVKLGPASWAVFVNDQRHHEIFLSRAAARREAKSQREAGKIDNNS*
Ga0126381_1038488222	3300010376	Tropical Forest Soil	MKTKVEKLEPGLWAVFVNGQRHHETFLTRAAARREAKRQTETNNNES*
Ga0126383_123932431	3300010398	Tropical Forest Soil	MNTRVEKQGPGSWVVFVNGQRHHETFLTRAAARREAERQKETNKIDNES*
Ga0124850_10897311	3300010863	Tropical Forest Soil	VVKLGPPLPEVTMKTSVVKLGPGSWAVFVNGQRHHELFLTRAAARREAKRQTEADKIDNKS*
Ga0126369_122582782	3300012971	Tropical Forest Soil	WAVFVNGQRHHELFLTRAAARSEAKRQTEANKTNNKR*
Ga0126369_135826022	3300012971	Tropical Forest Soil	MNTRVEKQGPGSWVVFVNGQPHHETFLTRAAARREAKRQTEADKI
Ga0182036_101156453	3300016270	Soil	MKTRVVKLGRGSWAVFVNDQPHHETFLTRAAARREAKRQKE
Ga0182036_103030352	3300016270	Soil	MDTRVEKQGPGSWVVFVNGQRHHEIFLTRAAARREAKRQ
Ga0182036_104458081	3300016270	Soil	MNTRVEKQGPGSWVVFINGQRHHEIFFTRAAARREAKRQKETNKI
Ga0182036_114779731	3300016270	Soil	VFVNGQRHHEIFRTRAAARREANRQKETNKIDNES
Ga0182041_105382971	3300016294	Soil	MKTRVQKLGPGSWVVFVNDQRHHEIFLTRAAARREAKRQREVNVSHT
Ga0182041_107772363	3300016294	Soil	GPGSWAVFVNGQRHHELFATRAAARREARRQKEANKIDNQS
Ga0182041_108344371	3300016294	Soil	MKTSVEKLGPGSWVVFVNGQRHHETFRTRAAARSEAERQKETNKIDSES
Ga0182041_114554601	3300016294	Soil	METRVEKAGPGSWVIFVNGQRHQETFTTRAAARIEAKRQKETNKIDNES
Ga0182041_122068591	3300016294	Soil	QSLTEVTMKTKVVKLGPGSWAVFVNDQRHHEAFLSRAADRREAKSQREANKIDNKS
Ga0182033_111373162	3300016319	Soil	MTTKVEKLGPGSWAVFINGQRHHELFATRAAARREARRQKEANK
Ga0182033_112111371	3300016319	Soil	MKTRVEKQGPQSWVVFVNGQRHHETFLTRAAARRE
Ga0182033_121566541	3300016319	Soil	VNGQRHNELFPTRAAARREARRQKEANNIDNQASA
Ga0182035_115507811	3300016341	Soil	MKTRVEKQGPGSWVVFVNGQRHHEIFLTRSAARREAKRQKEA
Ga0182032_101664195	3300016357	Soil	LTEVTMKTRVVKLGPGSWAVFVNDQRHHEVFLSRAAARREAKSQKEANKIENES
Ga0182034_101321881	3300016371	Soil	VEKQGPGSWVVFINGQRHHEIFFTRAAARREAKRQKETNKIDNES
Ga0182034_116625711	3300016371	Soil	LTEVTMKTRVVKLGPGSWAVFVNDQRHHEVFLSRAAARREAKSQKEANKIDNEG
Ga0182040_101079941	3300016387	Soil	MNMKVEKLGPGSWALFVNGQRYHELFLTRAAARREAKSQKEANKIDNKG
Ga0182040_104183894	3300016387	Soil	WAVFINGQRHHELFATRAAARREARRQKEANKIDTQS
Ga0182037_102770791	3300016404	Soil	KLGPGSWVVFVNDQRHHELFRTRAAARREAKRQTEANNIDNES
Ga0182037_119425271	3300016404	Soil	KLGPGSWAVFVNGQRHHELFLTRAAARREARRQKEANKIDNQN
Ga0182039_104635523	3300016422	Soil	KVEKLGPGSWVVFVNGQRHHELLPTRAAARREARRQKEANKIDNQS
Ga0182039_111919361	3300016422	Soil	EKLGPGSWVVFVNGQRHDEIFLTRAAARREAKRQKETNKIDNQS
Ga0182039_119904662	3300016422	Soil	VTILRYQQTMNTRVEKLGPGSWVVFVNGQRHHEIFRTRAAARREANRQKETNKIDNES
Ga0182039_120986981	3300016422	Soil	WAVFVNDQRHHETFLTRSAARREANRQKEADKIDNES
Ga0182039_122027521	3300016422	Soil	TMKTKVVKLGPESWAVFVNGQRHHEVFLSRAAARREAKKQKEANKIDNEG
Ga0182038_118023841	3300016445	Soil	PGSWVVFVNGQRHDEIFVTRAAARREAKRQKETKINNES
Ga0187817_100719365	3300017955	Freshwater Sediment	MKTRVEKLGPGSWAIFVNGQRHHEVFLTRAAARREAKRQTEDKKIDNQS
Ga0187778_105742161	3300017961	Tropical Peatland	MKTKVEKLGPGSWALFVNGQRHHELFLSRAAARREARRQKEAAKIDNES
Ga0187780_104496411	3300017973	Tropical Peatland	MNTKVEKLGPGSRAVFVNGQRHHEIFRTRAAARREAKRQEEANKIDSQS
Ga0187766_107080142	3300018058	Tropical Peatland	MNTKVEKLGPGSWAVFVNGQRHHEIFRTRAAARREAKRQEEANKIDSQS
Ga0066669_101573622	3300018482	Grasslands Soil	MKTRVEKLGPGSWAVLADGQRYHETFRTRAAARSEAKRQEEADKINNES
Ga0210403_104760741	3300020580	Soil	MKTKIEKLGPGSWAVFVNGQSHHEIFVTRAAARREARRQKEADKIDNES
Ga0210399_107700691	3300020581	Soil	METRVEKAGPGSWVVFVNGQRHQETFITRAAARIEAKRQKETNKIDNES
Ga0126371_100968222	3300021560	Tropical Forest Soil	MNTKVEKLGPGSWALFVNGQRYHELFLTRAAARREAKSQKEANKIDNKS
Ga0126371_104152152	3300021560	Tropical Forest Soil	MKTKVVKLGPGSWAVFVNDQRHHELFLTRSAARSEAKRQNEANKNDNES
Ga0126371_136872831	3300021560	Tropical Forest Soil	MKTRVVKLGPGSWAVFVNDQRHHELFLTRAAARKEAKRHTETDKVENEVRA
Ga0207700_106789532	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MKTKVEKLGPGSWAVFVDGQCHHEIFVTRAAARREGNNKHREADKIDNES
Ga0207806_10257601	3300027049	Tropical Forest Soil	MKTKVEKLGPGSWAVFVNGQRHHEIFRTRAAARREAKRQEEVGKINNQS
Ga0208365_10228222	3300027070	Forest Soil	VEQQGPGSWVVFVNGQRHHETFLTRAAARREAKRQKETNKIDNES
Ga0207777_10722542	3300027330	Tropical Forest Soil	MKTKVEKLGPGSWAVFVNGQRHHELFLSRAAARREAKRQKEADKIDDKS
Ga0209418_10606682	3300027371	Forest Soil	MKTRVEKLGPGSWVVFVNGQRHDETFVTRSAARREAKRQTEADKIDNES
Ga0207826_11582441	3300027680	Tropical Forest Soil	SWAVFVNGERHNELFPTCAAARREARRQKEANKIDNQASA
Ga0207862_10007237	3300027703	Tropical Forest Soil	MTTKVEKLGPGSWAVFVNGQRHNELFPTRAAARREARRQKEANKIDNQASA
Ga0207862_10230733	3300027703	Tropical Forest Soil	MKTRVVKLGPGSWAVFVNDQRHHELFLTRAAARREAKRQKEAKIDNEG
Ga0318541_101587151	3300031545	Soil	MKTRVVKLGRGSWAVFVNDQPYHETFLTRAAARREAKRQKEANK
Ga0318573_100978343	3300031564	Soil	PQPLTEETMKTRVEKLGPGSWVVFVNDQRHHEIFRTRAAARREAKRQTEANKIDNQS
Ga0310915_1000043324	3300031573	Soil	MKTRVEKLGPQSWVVFVNGQRHHETFLTRAAARREAKRQKETNKIDNQS
Ga0310915_101163222	3300031573	Soil	MKTKVVKLGPGSWVVFVNDQRHHELFRTRAAARREAKRQTEANNIDNES
Ga0318542_104013511	3300031668	Soil	LTEVTQAMKTRVVKLGPGSWAVFVNDQRHHELFLTRAAARREAKRQKEAKIDNEG
Ga0318574_105018171	3300031680	Soil	VKLGPGSWAVFVNDQRHHELFLTRAAARREAKRQKEAKIDNEG
Ga0306917_103460382	3300031719	Soil	MVSVTMKVNGQRHHETFRTRAAARSEAERQKETNKIDSES
Ga0306918_111424891	3300031744	Soil	MKTRVVKLGPGSWAVFVNDQRHHELFLTRAAARREAKRQKEAKI
Ga0307477_100441283	3300031753	Hardwood Forest Soil	MKTKVEKLGPGSWVVFVNGQRHHETFLTRAAARREANKHREADKIDSES
Ga0318547_103356201	3300031781	Soil	ATILRYQQTMNTRVEKLGPGSWALFVNGQRHHELFLTRAAARTEAKRQKETNKINNES
Ga0310917_109249381	3300031833	Soil	LTEETMKTKVVKLGPGSWAVFVNGQRHHEVFLSRAAARREAKKQKEANKIDNEG
Ga0310917_111815052	3300031833	Soil	TEPQSLTEVTQTMKTKVEKQGPGSWVVFVNGQRHHEIFLTRAAARREAKRQKETNKIDNQ
Ga0306919_100644065	3300031879	Soil	MDTRVEKQGPGSWVVFVNGQRHHEIFLTRAAARREAKRQKETDKIDNES
Ga0306919_109884002	3300031879	Soil	QTMTTKVEKLGPGSWAVFVNGQRHHELFATRAAARREARRQKEANKIDNQS
Ga0306925_100382159	3300031890	Soil	MKTRVEKLGPGSWVVFVNDQRHHEIFRTRAAARREAKRQTEANKIDNQS
Ga0306925_101744492	3300031890	Soil	MKTSVEKLGPGSWVVFVNGQRHHETFRTRAAARSEAKRQKETNKIDSES
Ga0306923_101207905	3300031910	Soil	MTTRVEKLGPGSWVVFVNGQRHDEIFLTRAAARREAKRQKETNKIDNQS
Ga0306923_103870912	3300031910	Soil	MKTKVVKLGPGSWAVFVNGQRHHEVFLSRAAARREAKKQKEANKIDNEG
Ga0306921_101764193	3300031912	Soil	MKTRVVKLGRGSWAVFVNDQPHHETFLTRAAARREAKRQKEADKINNES
Ga0306921_107158482	3300031912	Soil	MSITIPRDQETMNTRVEKQGPGSWVVFVNGQPHHETFLTRAAARREAKRQKETDKIDSKS
Ga0306921_115998581	3300031912	Soil	VFVNDQRHHEVFLSRAAARREAKKQKEANKIDNEG
Ga0310912_103028221	3300031941	Soil	MDTRVEKQGPGSWVVFVNGQRHHQIFLTRAAARREAK
Ga0310916_100609542	3300031942	Soil	MNTRVEKQGPGSWVVFVNGQRHHEIFLTRAAARREAKRQKETDKIDNES
Ga0310916_111574162	3300031942	Soil	MKTSVEKLGPGSWVVFVNGQRHHETFPTRAAARSEAKRQKETNKIDSES
Ga0310913_106870121	3300031945	Soil	MKTSVEKLGPGSWVVFVNGQRHHETFPTRAAARSEAKRQKET
Ga0310910_107198241	3300031946	Soil	EASTASGFLQSARSMSITIPRDQETMNTRVEKQGPGSWVVFVNGQPHHETFLTRAAARREAKRQKETDKIDSKS
Ga0310910_108722111	3300031946	Soil	MTTKVEKLGPGSWAVFVNGQRHHELFATRAAARRE
Ga0310909_106732862	3300031947	Soil	MKTRVVKLGPGSWAVFVNDQRHHEVFLSRAAARREAKSQKEANKIDNES
Ga0306926_103290381	3300031954	Soil	KLGPGSWAVFVNGQRHHELFATRAAARREARRQKEANKIDNQS
Ga0306926_105603761	3300031954	Soil	GSWAVFVNGQRHHELFATRSAARREARRQKEANKIDNQS
Ga0306926_112977161	3300031954	Soil	MKTRVVKLGPGSWAVFVNEQRHHELFLTRAAARREAKRQNEADKIDNKGREESVAA
Ga0306926_126782181	3300031954	Soil	MKTRVEKLGPGSWAVFVNDQRHHETFLTRSAARREANRQKEADKIDNES
Ga0306926_127516431	3300031954	Soil	MKTRVEKQGPGSWVVFVNGQPHHETFLTRAAARREAKRQKETDKIDNEG
Ga0306926_129626591	3300031954	Soil	MKTRVEKQGPGSWVVFVNGQRHHEIFLTRAAARREAKRQKETNK
Ga0318533_101500845	3300032059	Soil	WAVFVNDQRHHEAFLSRAADRREAKSQREANKIDNKS
Ga0318505_105594882	3300032060	Soil	MDTRVEKQGPGSWVVFVNGQRHHEIFLTRAAARREAKR
Ga0306924_111760861	3300032076	Soil	GPGSWVVFVNGQPHHETFLTRAAARREAKRQKETDKIDNQS
Ga0318540_105937211	3300032094	Soil	GPGSWVVFVDGQRHHEIFRTRAAARREAKRQTEANKIDNQS
Ga0307472_1013420271	3300032205	Hardwood Forest Soil	MNTRVEKQGPGSWVVFVNGQRHDETFVTRSAARREAKRQKETNKINNES
Ga0306920_1000821471	3300032261	Soil	ETMKTKVVKLGPGSWAVFVNGQRHHEVFLSRAAARREAKKQKEANKIDNEG
Ga0306920_1004706663	3300032261	Soil	MKTRVVKLGPGSWAVFVNDQRHHEVFLSRAAARREAKSQKEANKIENES
Ga0306920_1028899511	3300032261	Soil	MKTRVVKLGPGSWAVFVNEQRHHELFLTRAAARREAKRQNEAD
Ga0310914_117629181	3300033289	Soil	KVVKLGPGSWAVFVNGQRHHEVFLSRAAARREAKKQKEANKIDNEG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F051498

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences