Metagenome / Metatranscriptome Family F051519

Basic Information
Family ID	F051519
Family Type	Metagenome / Metatranscriptome
Number of Sequences	144
Average Sequence Length	41 residues
Representative Sequence	VMPAVLAERLAARAEQRGLSVSDLLTEYAEEGLRRDASDAA
Number of Associated Samples	128
Number of Associated Scaffolds	144

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	4.86 %
% of genes near scaffold ends (potentially truncated)	76.39 %
% of genes from short scaffolds (< 2000 bps)	90.97 %
Associated GOLD sequencing projects	125
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.61

Most Common Taxonomy
Group	Bacteria (82.639 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (23.611 % of family members)
Environment Ontology (ENVO)	Unclassified (23.611 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (46.528 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 47.83% β-sheet: 0.00% Coil/Unstructured: 52.17%
Feature Viewer

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Pfam ID	Name	% Frequency in 144 Family Scaffolds
PF03061	4HBT	9.72
PF00440	TetR_N	4.17
PF01638	HxlR	4.17
PF01402	RHH_1	3.47
PF00005	ABC_tran	3.47
PF13434	Lys_Orn_oxgnase	3.47
PF08327	AHSA1	2.78
PF02653	BPD_transp_2	2.78
PF04149	DUF397	2.08
PF12146	Hydrolase_4	2.08
PF00753	Lactamase_B	2.08
PF02861	Clp_N	2.08
PF02657	SufE	2.08
PF13458	Peripla_BP_6	1.39
PF04075	F420H2_quin_red	1.39
PF13191	AAA_16	0.69
PF00730	HhH-GPD	0.69
PF00582	Usp	0.69
PF13519	VWA_2	0.69
PF02909	TetR_C_1	0.69
PF14833	NAD_binding_11	0.69
PF00293	NUDIX	0.69
PF00581	Rhodanese	0.69
PF00903	Glyoxalase	0.69
PF15919	HicB_lk_antitox	0.69
PF13279	4HBT_2	0.69
PF00848	Ring_hydroxyl_A	0.69
PF03176	MMPL	0.69
PF00355	Rieske	0.69
PF00563	EAL	0.69
PF03446	NAD_binding_2	0.69
PF01061	ABC2_membrane	0.69
PF00313	CSD	0.69
PF02776	TPP_enzyme_N	0.69
PF00296	Bac_luciferase	0.69
PF01022	HTH_5	0.69
PF11716	MDMPI_N	0.69
PF13487	HD_5	0.69
PF08241	Methyltransf_11	0.69
PF00723	Glyco_hydro_15	0.69
PF01844	HNH	0.69
PF16925	TetR_C_13	0.69

COG ID	Name	Functional Category	% Frequency in 144 Family Scaffolds
COG1733	DNA-binding transcriptional regulator, HxlR family	Transcription [K]	4.17
COG0542	ATP-dependent Clp protease, ATP-binding subunit ClpA	Posttranslational modification, protein turnover, chaperones [O]	2.08
COG2166	Sulfur transfer protein SufE, Fe-S cluster assembly	Posttranslational modification, protein turnover, chaperones [O]	2.08
COG4638	Phenylpropionate dioxygenase or related ring-hydroxylating dioxygenase, large terminal subunit	Inorganic ion transport and metabolism [P]	1.39
COG0122	3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase	Replication, recombination and repair [L]	0.69
COG0177	Endonuclease III	Replication, recombination and repair [L]	0.69
COG1033	Predicted exporter protein, RND superfamily	General function prediction only [R]	0.69
COG1059	Thermostable 8-oxoguanine DNA glycosylase	Replication, recombination and repair [L]	0.69
COG1194	Adenine-specific DNA glycosylase, acts on AG and A-oxoG pairs	Replication, recombination and repair [L]	0.69
COG1309	DNA-binding protein, AcrR family, includes nucleoid occlusion protein SlmA	Transcription [K]	0.69
COG2141	Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)	Coenzyme transport and metabolism [H]	0.69
COG2200	EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant)	Signal transduction mechanisms [T]	0.69
COG2231	3-Methyladenine DNA glycosylase, HhH-GPD/Endo3 superfamily	Replication, recombination and repair [L]	0.69
COG2409	Predicted lipid transporter YdfJ, MMPL/SSD domain, RND superfamily	General function prediction only [R]	0.69
COG3387	Glucoamylase (glucan-1,4-alpha-glucosidase), GH15 family	Carbohydrate transport and metabolism [G]	0.69
COG3434	c-di-GMP phosphodiesterase YuxH/PdeH, contains EAL and HDOD domains	Signal transduction mechanisms [T]	0.69
COG4943	Redox-sensing c-di-GMP phosphodiesterase, contains CSS-motif and EAL domains	Signal transduction mechanisms [T]	0.69
COG5001	Cyclic di-GMP metabolism protein, combines GGDEF and EAL domains with a 6TM membrane domain	Signal transduction mechanisms [T]	0.69

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	82.64 %
Unclassified	root	N/A	17.36 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	82.64 %
Unclassified	root	N/A	17.36 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	82.64 %
Unclassified	root	N/A	17.36 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	72.22 %
Unclassified	root	N/A	17.36 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.78 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	58.33 %
Unclassified	root	N/A	17.36 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	3.47 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	2.08 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	36.81 %
Unclassified	root	N/A	17.36 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	3.47 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	2.08 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	17.36 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	5.56 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	4.17 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	3.47 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	2.78 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	2.78 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	2.08 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2.08 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	1.39 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.69 %
Micromonosporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales	0.69 %
Frankiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	17.36 %
Corynebacteriales incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Corynebacteriales incertae sedis	4.17 %
Treboniaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae	3.47 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	3.47 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	2.78 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	2.78 %
Burkholderia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia	2.08 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2.08 %
Streptosporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	1.39 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1.39 %
Micrococcaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae	0.69 %
Frankiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae	0.69 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	17.36 %
Fodinicola	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Corynebacteriales incertae sedis → Fodinicola	4.17 %
Trebonia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia	3.47 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	3.47 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	2.78 %
pseudomallei group	species group	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia → pseudomallei group	2.08 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2.08 %
Pseudonocardia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	1.39 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1.39 %
Arthrobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter	0.69 %
Amycolatopsis	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis	0.69 %
Rugosimonospora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Rugosimonospora	0.69 %
Streptosporangium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Streptosporangium	0.69 %
Frankia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	17.36 %
Fodinicola acaciae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Corynebacteriales incertae sedis → Fodinicola → Fodinicola acaciae	4.17 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	3.47 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	3.47 %
Burkholderia pseudomallei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia → pseudomallei group → Burkholderia pseudomallei	2.08 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2.08 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1.39 %
unclassified Pseudonocardia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → unclassified Pseudonocardia	0.69 %
Pseudonocardia pini	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → Pseudonocardia pini	0.69 %
Rugosimonospora africana	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Rugosimonospora → Rugosimonospora africana	0.69 %
Streptosporangium roseum	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Streptosporangium → Streptosporangium roseum	0.69 %
unclassified Arthrobacter	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter → unclassified Arthrobacter	0.69 %
Streptomyces albus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces albus	0.69 %
Amycolatopsis	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis	0.69 %
Frankia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia	0.69 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	17.36 %
Fodinicola acaciae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Corynebacteriales incertae sedis → Fodinicola → Fodinicola acaciae	4.17 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	3.47 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	3.47 %
Burkholderia pseudomallei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia → pseudomallei group → Burkholderia pseudomallei	2.08 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2.08 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1.39 %
Arthrobacter sp. S39	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter → unclassified Arthrobacter → Arthrobacter sp. S39	0.69 %
Pseudonocardia sp.	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → unclassified Pseudonocardia → Pseudonocardia sp.	0.69 %
Pseudonocardia pini	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → Pseudonocardia pini	0.69 %
Rugosimonospora africana	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Rugosimonospora → Rugosimonospora africana	0.69 %
Streptosporangium roseum	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Streptosporangium → Streptosporangium roseum	0.69 %
Streptomyces albus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces albus	0.69 %
Amycolatopsis	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis	0.69 %
Frankia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia	0.69 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2166559006\|FI_contig15024	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	832	Open in IMG/M
2189573004\|GZGWRS402HWBMA	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	501	Open in IMG/M
3300000559\|F14TC_112803702	Not Available	504	Open in IMG/M
3300001431\|F14TB_105570537	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → unclassified Pseudonocardia → Pseudonocardia sp.	597	Open in IMG/M
3300004099\|Ga0058900_1377998	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	792	Open in IMG/M
3300004153\|Ga0063455_101538300	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	521	Open in IMG/M
3300005440\|Ga0070705_100891958	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Corynebacteriales incertae sedis → Fodinicola → Fodinicola acaciae	714	Open in IMG/M
3300005538\|Ga0070731_10476073	Not Available	831	Open in IMG/M
3300005574\|Ga0066694_10379370	All Organisms → cellular organisms → Bacteria → Terrabacteria group	667	Open in IMG/M
3300005577\|Ga0068857_100190367	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1868	Open in IMG/M
3300005719\|Ga0068861_101066020	All Organisms → cellular organisms → Bacteria → Terrabacteria group	775	Open in IMG/M
3300005841\|Ga0068863_100417271	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1314	Open in IMG/M
3300005844\|Ga0068862_100204580	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1781	Open in IMG/M
3300006162\|Ga0075030_101520595	Not Available	524	Open in IMG/M
3300006163\|Ga0070715_10093172	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1390	Open in IMG/M
3300006163\|Ga0070715_10377632	All Organisms → cellular organisms → Bacteria	781	Open in IMG/M
3300006893\|Ga0073928_10340429	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1114	Open in IMG/M
3300006954\|Ga0079219_10571542	All Organisms → cellular organisms → Bacteria	817	Open in IMG/M
3300009038\|Ga0099829_10011456	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia	5773	Open in IMG/M
3300009100\|Ga0075418_11869152	Not Available	653	Open in IMG/M
3300009137\|Ga0066709_104321573	All Organisms → cellular organisms → Bacteria → Terrabacteria group	518	Open in IMG/M
3300009143\|Ga0099792_10359860	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	880	Open in IMG/M
3300009551\|Ga0105238_10954583	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	877	Open in IMG/M
3300009792\|Ga0126374_11124591	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia → pseudomallei group → Burkholderia pseudomallei	624	Open in IMG/M
3300010046\|Ga0126384_10371240	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1199	Open in IMG/M
3300010048\|Ga0126373_10652652	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1108	Open in IMG/M
3300010337\|Ga0134062_10154320	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1023	Open in IMG/M
3300010343\|Ga0074044_10328068	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	1005	Open in IMG/M
3300010358\|Ga0126370_10065135	All Organisms → cellular organisms → Bacteria	2384	Open in IMG/M
3300010361\|Ga0126378_10316389	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia → pseudomallei group → Burkholderia pseudomallei	1666	Open in IMG/M
3300010366\|Ga0126379_11920110	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	695	Open in IMG/M
3300010371\|Ga0134125_10689226	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1127	Open in IMG/M
3300010371\|Ga0134125_11610197	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Corynebacteriales incertae sedis → Fodinicola → Fodinicola acaciae	707	Open in IMG/M
3300010376\|Ga0126381_100626066	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1533	Open in IMG/M
3300010376\|Ga0126381_104114070	All Organisms → cellular organisms → Bacteria	565	Open in IMG/M
3300010379\|Ga0136449_100547494	All Organisms → cellular organisms → Bacteria	1991	Open in IMG/M
3300010396\|Ga0134126_11733305	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Corynebacteriales incertae sedis → Fodinicola → Fodinicola acaciae	685	Open in IMG/M
3300010396\|Ga0134126_12693430	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	540	Open in IMG/M
3300010880\|Ga0126350_10395318	All Organisms → cellular organisms → Bacteria → Terrabacteria group	570	Open in IMG/M
3300011107\|Ga0151490_1507696	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	780	Open in IMG/M
3300011120\|Ga0150983_12368510	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	574	Open in IMG/M
3300011120\|Ga0150983_14388979	Not Available	517	Open in IMG/M
3300012189\|Ga0137388_10077218	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2795	Open in IMG/M
3300012198\|Ga0137364_10037763	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3137	Open in IMG/M
3300012198\|Ga0137364_10788509	All Organisms → cellular organisms → Bacteria → Terrabacteria group	718	Open in IMG/M
3300012201\|Ga0137365_10016571	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	5760	Open in IMG/M
3300012202\|Ga0137363_11628703	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	538	Open in IMG/M
3300012211\|Ga0137377_10078723	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3098	Open in IMG/M
3300012285\|Ga0137370_10787436	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	590	Open in IMG/M
3300012359\|Ga0137385_10607397	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Rugosimonospora → Rugosimonospora africana	919	Open in IMG/M
3300012362\|Ga0137361_10143974	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2124	Open in IMG/M
3300012363\|Ga0137390_10724492	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	956	Open in IMG/M
3300012481\|Ga0157320_1036813	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	516	Open in IMG/M
3300012917\|Ga0137395_11028523	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	588	Open in IMG/M
3300012924\|Ga0137413_11627925	Not Available	528	Open in IMG/M
3300012930\|Ga0137407_10526609	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1105	Open in IMG/M
3300012986\|Ga0164304_10639686	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	800	Open in IMG/M
3300012987\|Ga0164307_11927938	All Organisms → cellular organisms → Bacteria → Terrabacteria group	501	Open in IMG/M
3300013306\|Ga0163162_11950895	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	672	Open in IMG/M
3300015053\|Ga0137405_1127555	All Organisms → cellular organisms → Bacteria → Terrabacteria group	669	Open in IMG/M
3300015372\|Ga0132256_101687380	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	743	Open in IMG/M
3300016371\|Ga0182034_10671339	All Organisms → cellular organisms → Bacteria → Proteobacteria	879	Open in IMG/M
3300017937\|Ga0187809_10050009	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1349	Open in IMG/M
3300017937\|Ga0187809_10233493	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	661	Open in IMG/M
3300017974\|Ga0187777_10136136	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1633	Open in IMG/M
3300018006\|Ga0187804_10579537	Not Available	509	Open in IMG/M
3300018042\|Ga0187871_10442786	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	718	Open in IMG/M
3300018046\|Ga0187851_10790068	Not Available	534	Open in IMG/M
3300020579\|Ga0210407_10043802	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3333	Open in IMG/M
3300021178\|Ga0210408_10784485	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	747	Open in IMG/M
3300021180\|Ga0210396_11097822	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	670	Open in IMG/M
3300021180\|Ga0210396_11528498	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	548	Open in IMG/M
3300021374\|Ga0213881_10060811	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1607	Open in IMG/M
3300021402\|Ga0210385_10809606	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	718	Open in IMG/M
3300021405\|Ga0210387_10121910	All Organisms → cellular organisms → Bacteria	2204	Open in IMG/M
3300021407\|Ga0210383_11740577	Not Available	509	Open in IMG/M
3300021475\|Ga0210392_11030361	All Organisms → cellular organisms → Bacteria	616	Open in IMG/M
3300021477\|Ga0210398_10497611	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	992	Open in IMG/M
3300021560\|Ga0126371_12566781	Not Available	617	Open in IMG/M
3300022708\|Ga0242670_1068641	Not Available	537	Open in IMG/M
3300022715\|Ga0242678_1049933	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	602	Open in IMG/M
3300022724\|Ga0242665_10325965	Not Available	544	Open in IMG/M
3300022840\|Ga0224549_1010707	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1332	Open in IMG/M
3300025903\|Ga0207680_11348771	Not Available	507	Open in IMG/M
3300025909\|Ga0207705_10268907	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1303	Open in IMG/M
3300025913\|Ga0207695_10723435	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Corynebacteriales incertae sedis → Fodinicola → Fodinicola acaciae	876	Open in IMG/M
3300025916\|Ga0207663_10065575	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2322	Open in IMG/M
3300025929\|Ga0207664_10325187	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces albus	1357	Open in IMG/M
3300025960\|Ga0207651_10837745	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Corynebacteriales incertae sedis → Fodinicola → Fodinicola acaciae	817	Open in IMG/M
3300025961\|Ga0207712_12009046	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter → unclassified Arthrobacter → Arthrobacter sp. S39	517	Open in IMG/M
3300026118\|Ga0207675_100227124	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1800	Open in IMG/M
3300026214\|Ga0209838_1022595	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	880	Open in IMG/M
3300026551\|Ga0209648_10843472	Not Available	501	Open in IMG/M
3300027523\|Ga0208890_1015566	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1056	Open in IMG/M
3300027768\|Ga0209772_10101446	All Organisms → cellular organisms → Bacteria	885	Open in IMG/M
3300027775\|Ga0209177_10391477	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	555	Open in IMG/M
3300027853\|Ga0209274_10410184	Not Available	700	Open in IMG/M
3300028782\|Ga0307306_10183639	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	594	Open in IMG/M
3300028807\|Ga0307305_10334441	All Organisms → cellular organisms → Bacteria → Terrabacteria group	687	Open in IMG/M
3300028819\|Ga0307296_10340579	All Organisms → cellular organisms → Bacteria → Terrabacteria group	819	Open in IMG/M
3300028824\|Ga0307310_10384906	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → Pseudonocardia pini	694	Open in IMG/M
3300028828\|Ga0307312_10176466	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1365	Open in IMG/M
3300028828\|Ga0307312_10196458	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Corynebacteriales incertae sedis → Fodinicola → Fodinicola acaciae	1294	Open in IMG/M
3300028828\|Ga0307312_10587116	All Organisms → cellular organisms → Bacteria → Terrabacteria group	737	Open in IMG/M
3300028877\|Ga0302235_10132643	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	1118	Open in IMG/M
3300030053\|Ga0302177_10007066	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	7654	Open in IMG/M
3300030057\|Ga0302176_10415990	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	542	Open in IMG/M
3300030677\|Ga0302317_10256840	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	790	Open in IMG/M
3300031027\|Ga0302308_10065594	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2570	Open in IMG/M
3300031028\|Ga0302180_10123833	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	1458	Open in IMG/M
3300031057\|Ga0170834_106424483	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	961	Open in IMG/M
3300031090\|Ga0265760_10051775	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	1237	Open in IMG/M
3300031231\|Ga0170824_108138798	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1017	Open in IMG/M
3300031234\|Ga0302325_12342942	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	643	Open in IMG/M
3300031525\|Ga0302326_11532950	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis	890	Open in IMG/M
3300031640\|Ga0318555_10247668	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	963	Open in IMG/M
3300031708\|Ga0310686_118527529	Not Available	511	Open in IMG/M
3300031736\|Ga0318501_10582242	All Organisms → cellular organisms → Bacteria → Terrabacteria group	614	Open in IMG/M
3300031736\|Ga0318501_10593252	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	608	Open in IMG/M
3300031751\|Ga0318494_10131968	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Streptosporangium → Streptosporangium roseum	1398	Open in IMG/M
3300031751\|Ga0318494_10319266	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	897	Open in IMG/M
3300031764\|Ga0318535_10309394	Not Available	707	Open in IMG/M
3300031770\|Ga0318521_10398371	Not Available	820	Open in IMG/M
3300031771\|Ga0318546_11292604	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	512	Open in IMG/M
3300031796\|Ga0318576_10393203	All Organisms → cellular organisms → Bacteria → Terrabacteria group	655	Open in IMG/M
3300031798\|Ga0318523_10075584	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	1625	Open in IMG/M
3300031799\|Ga0318565_10424947	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	643	Open in IMG/M
3300031845\|Ga0318511_10454625	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	590	Open in IMG/M
3300031846\|Ga0318512_10058436	Not Available	1738	Open in IMG/M
3300031846\|Ga0318512_10704355	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia → pseudomallei group → Burkholderia pseudomallei	518	Open in IMG/M
3300031860\|Ga0318495_10546733	All Organisms → cellular organisms → Bacteria	504	Open in IMG/M
3300031879\|Ga0306919_10014400	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4592	Open in IMG/M
3300031941\|Ga0310912_10684005	All Organisms → cellular organisms → Bacteria → Terrabacteria group	796	Open in IMG/M
3300032001\|Ga0306922_11667519	All Organisms → cellular organisms → Bacteria	632	Open in IMG/M
3300032001\|Ga0306922_12078873	Not Available	551	Open in IMG/M
3300032035\|Ga0310911_10624192	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	625	Open in IMG/M
3300032039\|Ga0318559_10248660	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	822	Open in IMG/M
3300032039\|Ga0318559_10271164	Not Available	786	Open in IMG/M
3300032043\|Ga0318556_10119924	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1344	Open in IMG/M
3300032067\|Ga0318524_10748275	Not Available	516	Open in IMG/M
3300032515\|Ga0348332_10174355	Not Available	517	Open in IMG/M
3300032515\|Ga0348332_13513114	Not Available	517	Open in IMG/M
3300032892\|Ga0335081_11240367	All Organisms → cellular organisms → Bacteria	846	Open in IMG/M
3300033289\|Ga0310914_11786711	Not Available	519	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	89.58%
Host-Associated	Host-Associated	10.42%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	84.03%
Plants	Host-Associated → Plants	10.42%
Aquatic	Environmental → Aquatic	5.56%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	75.69%
Peat	Environmental → Terrestrial → Peat	6.25%
Rhizosphere	Host-Associated → Plants → Rhizosphere	5.56%
Rhizoplane	Host-Associated → Plants → Rhizoplane	4.86%
Freshwater	Environmental → Aquatic → Freshwater	4.17%
Plant Litter	Environmental → Terrestrial → Plant Litter	1.39%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.69%
Sediment	Environmental → Aquatic → Sediment	0.69%
Rock-Dwelling (Subaerial Biofilms)	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms)	0.69%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	64.58%
Loam	Environmental → Terrestrial → Soil → Loam	8.33%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	6.25%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	4.86%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	4.17%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.78%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.78%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.78%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	1.39%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.69%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.69%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified	0.69%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	32.64%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	27.78%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	6.25%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	4.86%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.47%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.78%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.78%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.78%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.78%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	2.08%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	2.08%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.08%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	2.08%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.39%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	1.39%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	0.69%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.69%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.69%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified	0.69%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	23.61%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	11.11%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	7.64%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	6.25%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	5.56%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.78%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.78%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.78%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.78%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	2.08%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	2.08%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.08%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	1.39%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.39%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.39%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.39%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.39%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	1.39%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.39%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.39%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.69%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	0.69%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.69%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.69%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grass Soil	0.69%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.69%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	0.69%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.69%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.69%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.69%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.69%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.69%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	0.69%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.69%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.69%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	0.69%
Exposed Rock	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified → Exposed Rock	0.69%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.69%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	0.69%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.69%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.69%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.69%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.69%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.69%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	0.69%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2166559006	Grass soil microbial communities from Rothamsted Park, UK - FI (heavy metals 2g/kg) assembled	Environmental	Open in IMG/M
2189573004	Grass soil microbial communities from Rothamsted Park, UK - FG2 (Nitrogen)	Environmental	Open in IMG/M
3300000559	Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemly	Environmental	Open in IMG/M
3300001431	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.4TB clc assemly	Environmental	Open in IMG/M
3300004099	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF236 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004153	Grasslands soil microbial communities from Hopland, California, USA (version 2)	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005538	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1	Environmental	Open in IMG/M
3300005574	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143	Environmental	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300006162	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010337	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010880	Boreal forest soil eukaryotic communities from Alaska, USA - C5-1 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300011107	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHAC (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012481	Arabidopsis rhizosphere microbial communities from North Carolina - M.Cvi.1.yng.040610	Host-Associated	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300015053	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300017937	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_4	Environmental	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300018006	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_4	Environmental	Open in IMG/M
3300018042	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_10	Environmental	Open in IMG/M
3300018046	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_10	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021374	Barbacenia macrantha exposed rock microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - ER_R08	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022708	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022715	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022724	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-17-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022840	Peat soil microbial communities from Stordalen Mire, Sweden - 717 P3 1-5	Environmental	Open in IMG/M
3300025903	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025909	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025913	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026214	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 2 DNA2013-047 (SPAdes)	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300027523	Soil and rhizosphere microbial communities from Laval, Canada - mgHPA (SPAdes)	Environmental	Open in IMG/M
3300027768	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027775	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control (SPAdes)	Environmental	Open in IMG/M
3300027853	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1 (SPAdes)	Environmental	Open in IMG/M
3300028782	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_193	Environmental	Open in IMG/M
3300028807	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_186	Environmental	Open in IMG/M
3300028819	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153	Environmental	Open in IMG/M
3300028824	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300028877	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N3_3	Environmental	Open in IMG/M
3300030053	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E1_2	Environmental	Open in IMG/M
3300030057	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E1_1	Environmental	Open in IMG/M
3300030677	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N3_3	Environmental	Open in IMG/M
3300031027	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E3_3	Environmental	Open in IMG/M
3300031028	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E3_2	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031090	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031525	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031764	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031799	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f21	Environmental	Open in IMG/M
3300031845	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18	Environmental	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300031860	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f25	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032039	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f21	Environmental	Open in IMG/M
3300032043	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24	Environmental	Open in IMG/M
3300032067	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f22	Environmental	Open in IMG/M
3300032515	FICUS49499 Metatranscriptome Czech Republic combined assembly (additional data)	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

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Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.61
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.61
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F051519

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
FI_00026900	2166559006	Grass Soil	VLAERLAARAEQRGLSVSDLLTEYAEEGLRRDASGAA
FG2_08639960	2189573004	Grass Soil	MLPVGLADRLAAEAERRGLSVSDLLADYAEQGLRRDGTPG
F14TC_1128037023	3300000559	Soil	VVMPAVLAERLAARAEQRGLSVSDLLTEYAEEGLRRDASDAA*
F14TB_1055705373	3300001431	Soil	VMPAVLAERLAARAEQRGLSVSDLLTEYAEEGLRRDASDAA*
Ga0058900_13779981	3300004099	Forest Soil	LVLPARLAERLAARAEQRGLSFSDLLVEYAQDGLDHDGADGP*
Ga0063455_1015383001	3300004153	Soil	VRRTVVLPTVLAERLAARAEQRSLSVSDLLAEYAEEGLRRDDPGAA*
Ga0070705_1008919581	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	RRTMVMPAGLAERLAARAEQRGLSVSDLLTEYAEEGLRRDRPGPA*
Ga0070731_104760732	3300005538	Surface Soil	AERLAAQAERRGLSVSDLLIEYAEEGLRRDEADGAPA*
Ga0066694_103793702	3300005574	Soil	VRRAVVMPIALAERLAARAEQRDLSVSDLLVEYAEEGLRRDVADG*
Ga0068857_1001903673	3300005577	Corn Rhizosphere	ERLAARAEQRGLSVSDLLTEYAEEGLRRDGPGPA*
Ga0068861_1010660201	3300005719	Switchgrass Rhizosphere	DCVRRAVVMPIALAERLAARAEQRDLSVSDLLVEYAEEGLRRDVADG*
Ga0068863_1004172713	3300005841	Switchgrass Rhizosphere	AERLAARAEQRGLSVSDLLTEYAEEGLRRDGPGPA*
Ga0068862_1002045801	3300005844	Switchgrass Rhizosphere	LAERLAARAEQRGLSVSDLLTEYAEEGLRRDASGAA*
Ga0075030_1015205951	3300006162	Watersheds	DDCVRRSVVMTAVLAERLAAQAERRGLSISDLLAEYAEEGLRRDGADG*
Ga0070715_100931725	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	RLAAQAGRRGLSVSDLLAEYAEQGLQRDAGEEPAG*
Ga0070715_103776321	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	PAVLAERLAARAEQRGLSISDLLTEYAEEGLRRDGPGPA*
Ga0073928_103404293	3300006893	Iron-Sulfur Acid Spring	AALAERLAARAEQRGVSVSDLLVEYAQDGLDHDGAGGA*
Ga0079219_105715421	3300006954	Agricultural Soil	DDCVRRTMVIPAVLAERLAARAEQRGLSISDLLTEYAEEGLRRDGPGPA*
Ga0099829_100114563	3300009038	Vadose Zone Soil	MPAALAEQLAAIADQRGLSISDLLVEYAQQGLRRDGADH*
Ga0075418_118691522	3300009100	Populus Rhizosphere	LAERLAAEAERRGLSVSDLLVEYADEGLRRQGADQ*
Ga0066709_1043215732	3300009137	Grasslands Soil	MPAGLAERLAARAGQRGLSVSDLLTEYAEEGLRRDGSGAA*
Ga0099792_103598601	3300009143	Vadose Zone Soil	MPAALAERLAAIADQRGVSISDLLVEYARQGLRRDGADY*
Ga0105238_109545831	3300009551	Corn Rhizosphere	TMVMPAGLAERLAARAEQRGLSVSDLLTEYAEEGLRRDRPGPA*
Ga0126374_111245911	3300009792	Tropical Forest Soil	MPTVLAERLAARAEQRGLSVSDLLVQYAEEGLRRDQEPG*
Ga0126384_103712402	3300010046	Tropical Forest Soil	MVVMPTVLAERLAARAEQRGLSVSDLLVQYAEEGLRRDREPG*
Ga0126373_106526522	3300010048	Tropical Forest Soil	MPTVLAERLAARAQQRGLSVSDLLVQYAEEGLRRDTEPG*
Ga0134062_101543201	3300010337	Grasslands Soil	MPIALAERLAARAEQRDLSVSDLLVEYAEEGLRRDVAD
Ga0074044_103280682	3300010343	Bog Forest Soil	MPIALAERLAARAERLSLSVSDLLVGYAEEGLRRDEPQVPPSVR*
Ga0126370_100651352	3300010358	Tropical Forest Soil	MPTVLAERLAARAEQRGLSVSDLLVQYAEEGLRRDPEPG*
Ga0126378_103163892	3300010361	Tropical Forest Soil	MPAVLAERLAARAEQRDVSVSDLLVQYAEEGLRRDREPG*
Ga0126379_119201102	3300010366	Tropical Forest Soil	MPTVLAERLAARAEQRGLSVSDLLVQYAEEGLRRDREPG*
Ga0134125_106892261	3300010371	Terrestrial Soil	IVLAERLAAQAGRRGLSVSDLLAEYAEQGLQRDAGEEPAG*
Ga0134125_116101972	3300010371	Terrestrial Soil	VRRTMVMPAGLAERLAARAEQRGLSVSDLLTEYAEEGLRRDGPGPA*
Ga0126381_1006260662	3300010376	Tropical Forest Soil	MPVALAERLAAEAERRELSVSELLIEYAEEGLRRDAADG*
Ga0126381_1041140701	3300010376	Tropical Forest Soil	PAPLAERLAARAEQRGLSFSDLLVEYAEDGLHRDGADGP*
Ga0136449_1005474941	3300010379	Peatlands Soil	IVMPAVLAEQLAVRAGQRGLSVSDLMVEYAREGLHHDRTGG*
Ga0134126_117333051	3300010396	Terrestrial Soil	LAERLAARAEQRGLSVSDLLTEYAEEGLRRDGPGPA*
Ga0134126_126934301	3300010396	Terrestrial Soil	VLAERLAARAEQRGLSVSDLLTEYAEEGLRRDASGAA*
Ga0126350_103953182	3300010880	Boreal Forest Soil	MLVLPATLAERLAARAEQRGLSVSDLLVEYAQDGLDHDRADGA*
Ga0151490_15076962	3300011107	Soil	MPAVLAERLAAQAEQRDLSVSDLLAEYAEEGLRRDEADG*
Ga0150983_123685103	3300011120	Forest Soil	ARLAERLAARAEQRGLSFSDLLVEYAQDGLDHDGADGP*
Ga0150983_143889792	3300011120	Forest Soil	VRRTVVLPTLLAERIAAQAEQRGLSFSDLFVEYAQDGLRRDGAVGR*
Ga0137388_100772182	3300012189	Vadose Zone Soil	MPAALAEQLAAIADQRGLSISDLLVEYAQQGLRRDGADP*
Ga0137364_100377634	3300012198	Vadose Zone Soil	MPAGLAERLAARAEQRGLSVSDLLTEYAEEGLRRDGSGAA*
Ga0137364_107885092	3300012198	Vadose Zone Soil	VMPIALAERLAARAEQRDLSVSDLLVEYAEEGLRRDVADG*
Ga0137365_100165715	3300012201	Vadose Zone Soil	MPAVLAERLAAQAEQRDLSVSDLLAEYAEEGLRRDGADG*
Ga0137363_116287032	3300012202	Vadose Zone Soil	MPAVLAERLAARADQRGLSISDLLTEYAEEGLRRDGAA*
Ga0137377_100787231	3300012211	Vadose Zone Soil	VVLPAALAERLAAAAERLAAAAERRGLSVSDLLAEYAQEGLRRDAADG*
Ga0137370_107874361	3300012285	Vadose Zone Soil	CVHRTMVMPAVLAERLASRAEQRGLSVSDLLTEYAEEGLRRDASGAD*
Ga0137385_106073973	3300012359	Vadose Zone Soil	TVLAERLAAQAERRGLSVSDLLAEYAEEGLRHDAA*
Ga0137361_101439743	3300012362	Vadose Zone Soil	MPAALAEQLAAIADQRGLSISDLLVEYAQQGLRRDGAD
Ga0137390_107244922	3300012363	Vadose Zone Soil	VMPAALAERLAAIADQRGVSISDLLVEYARQGLRRDGADY*
Ga0157320_10368132	3300012481	Arabidopsis Rhizosphere	RRTMVMPAVLAERLAARAEQRGLSVSDLLTEYAEEGLRRDASGVG*
Ga0137395_110285232	3300012917	Vadose Zone Soil	MPAALAERLAAIADQRGVSISDLLVEYARQGLRRDGADH*
Ga0137413_116279251	3300012924	Vadose Zone Soil	VLAERLAARAEQRGLSISDLLAEYAEEGLRRDGSGAA*
Ga0137407_105266092	3300012930	Vadose Zone Soil	VRRTFVMRADLAERLAVRAEQRGLSVSDLLVEFAEEGLRR
Ga0164304_106396862	3300012986	Soil	MVMPAALAERLATRAEQRGLSVSELLSEYAEEGLRRDPLI*
Ga0164307_119279381	3300012987	Soil	MVMPAALAERLATRAEQRGLSVSELLSEYAEEGLR
Ga0163162_119508952	3300013306	Switchgrass Rhizosphere	AVLAERLAARAEQRGLSVSDLLTEYAEEGLRRDASGAA*
Ga0137405_11275552	3300015053	Vadose Zone Soil	VRRTFVMRADLAERLAVRAEQRGLSVSDLLVEFAEEGLRRNEAAG*
Ga0132256_1016873802	3300015372	Arabidopsis Rhizosphere	MPIVLAERLAARAEQRDLSVSDLLVEYAEEGLRRDVADG
Ga0182034_106713393	3300016371	Soil	ALLAERLAARAEKRGLSFSDLIVEYAEDGLRRDGSDGP
Ga0187809_100500091	3300017937	Freshwater Sediment	VLAERLAAQAEQRGLSVSDLLAEYAEEGLRREEPGGA
Ga0187809_102334931	3300017937	Freshwater Sediment	AVLTERLAARAEQRGLSFSDLLVEYAQDGLERDEADGP
Ga0187777_101361363	3300017974	Tropical Peatland	VRRTVVLPALLAERLAARAEQRGLSFSDLLVEYAQDGLDRDGA
Ga0187804_105795372	3300018006	Freshwater Sediment	VLAERLADRAERRGLSISDLLAEYAEEGLRRDGAAE
Ga0187871_104427862	3300018042	Peatland	TLILPALLAERLAARAEQRGLSFSDLLVEYAQDGLDRDRAGGR
Ga0187851_107900681	3300018046	Peatland	VLAEQLAAQADRRGLSVSDLLVEYAEIGLRRDEADD
Ga0210407_100438021	3300020579	Soil	LAERLAAQAERRGLSISDLLAEYAEEGLRRDGADG
Ga0210408_107844851	3300021178	Soil	VRRTVVMPIALAERLAAQAERRELSVSELLIEYAEEGLRRDAADA
Ga0210396_110978222	3300021180	Soil	CVRRTMVMPAGLAERLAARAEQRGLSVSDLLTEYAEEGLRRDTSGAA
Ga0210396_115284981	3300021180	Soil	RRMLVLPATLAERLAARAEQRGVSVSDLLVEYAQDGLDHDGADGA
Ga0213881_100608113	3300021374	Exposed Rock	MPTLPTALAERLAARAEQRDLSVSDLLAEYAQEGLLRDR
Ga0210385_108096061	3300021402	Soil	DCVRRMLVLPARLAERLAAQAEQRGLSFSDLLVKYAQDGLDHDGADGP
Ga0210387_101219101	3300021405	Soil	EHLADRAEKRGLSVSDLLVDYAEEGLRRDDEADTG
Ga0210383_117405772	3300021407	Soil	DRVRRTIVLPTRLAERLAARAEQRGLSFSDLLVGYAQDGLDRDGADGP
Ga0210392_110303611	3300021475	Soil	VRRTGVMPAVLAERLAARAEQRGLSISDLLTEYAEEGLRRDT
Ga0210398_104976113	3300021477	Soil	VRRMLVLPARLAERLAAQAEQRGLSFSDLLVKYAQDGLDHDGADGP
Ga0126371_125667812	3300021560	Tropical Forest Soil	VVMPAALAERLAAEAERRELSVSDLLVEYAEDGLRRGAPNGVP
Ga0242670_10686413	3300022708	Soil	LAERLAARAEQRGLSFSDLLVEYAQDGLDHDGADGP
Ga0242678_10499331	3300022715	Soil	RLAERLAARAEQRGLSFSDLLVEYAQDGLDRDGAGGP
Ga0242665_103259651	3300022724	Soil	ARLAERLAARAEQRGLSFSDLLVEYAQDGLDRDGADGP
Ga0224549_10107071	3300022840	Soil	RTLVLPALLAERLAARAEQRGLSFSDLLVEYAQGGLDRDCADGS
Ga0207680_113487712	3300025903	Switchgrass Rhizosphere	MVMPAALAERLAARAEQRGLSISDLLTEYAEEGLRRDT
Ga0207705_102689073	3300025909	Corn Rhizosphere	RVRRTMVMPAGLAERLAARAEQRGLSVSDLLTEYAEEGLRRDRPGPA
Ga0207695_107234351	3300025913	Corn Rhizosphere	RVRRTMVMPAGLAERLAARAEQRGLSVSDLLTEYAEEGLRRDASGAA
Ga0207663_100655753	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MVMPAALAERLATRAEQRGLSVSELLSEYAEEGLRHDPQA
Ga0207664_103251871	3300025929	Agricultural Soil	MPARLAERLAARAEQRGLSISDLLAEYAEEGLRRDT
Ga0207651_108377453	3300025960	Switchgrass Rhizosphere	RVRRTMVMPAGLAERLAARAEQRGLSVSDLLTEYAEEGLRRAGPGPA
Ga0207712_120090462	3300025961	Switchgrass Rhizosphere	DDRVRRTMVMPAGLAERLAARAEQRGLSVSDLVTEYAEEGLRRDGPGPA
Ga0207675_1002271243	3300026118	Switchgrass Rhizosphere	DDCVRRTMVMPTGLAERLAARAEQRGLSVSDLLTEYAEEGLRRDASGAA
Ga0209838_10225952	3300026214	Soil	IGLAERLAAQAERRGLSISDLLVEYAEDGLRRDQAG
Ga0209648_108434721	3300026551	Grasslands Soil	RTVVLPAVLAERLAAQAGRRGLSVSDLLAEYAEEGLRHDAA
Ga0208890_10155663	3300027523	Soil	MPAVLAERLAAQAEQRDLSVSDLLAEYAEEGLRRDGADG
Ga0209772_101014462	3300027768	Bog Forest Soil	DCVRRTVVLPVVLAERLAARAERLRLSVSDLLVEYAEEGLRRDEPSVQ
Ga0209177_103914772	3300027775	Agricultural Soil	MVMPVVLAERLAARAEQRGLSVSDLLTEYAEEGLRRDASGAA
Ga0209274_104101842	3300027853	Soil	VIPAGLAERVAARAEQRGLSFSDLLAEYAQQGLDRDG
Ga0307306_101836391	3300028782	Soil	PAVLAERLAARAEQRGLSVSDLLTEYAEEGLRRDASGAA
Ga0307305_103344411	3300028807	Soil	RWSPYHFRRAVVMPIALAERLAARAEQRDLSVSDLLVEYAEEGLRRDAADG
Ga0307296_103405791	3300028819	Soil	AVVMPIALAERLAARAEQRDLSVSDLLVEYAEEGLRRDAADG
Ga0307310_103849061	3300028824	Soil	MPAVLAERLAARAEQRGLSVSDLLTEYAEEGLRRDASGAA
Ga0307312_101764661	3300028828	Soil	AERLAARAEQRGLSVSDLLTEYAEEGLRRDASGAA
Ga0307312_101964581	3300028828	Soil	AVLAERLAARAEQRGLSVSDLLTEYAEEGLRRDASGAA
Ga0307312_105871161	3300028828	Soil	TVVMPAVLAERLAAQAEQRDLSVSDLLAEYAEEGLRRDGAGG
Ga0302235_101326433	3300028877	Palsa	RTLILPARLAERLAARAEQRGLSFSDLLVEYAQDSLDRDRADGS
Ga0302177_100070661	3300030053	Palsa	PVVLAERLAARAGQRGLSVSDLLVEYAEIGLRRDEADD
Ga0302176_104159901	3300030057	Palsa	VVIPVMLAERLAAQADRRRLSVSDLLVEYAEIGLRRDEADD
Ga0302317_102568401	3300030677	Palsa	LAEQLAARAEHHGLSVSDLLAQYAEEGLRRDEDAGQ
Ga0302308_100655945	3300031027	Palsa	RTLVLPALLAERLAARAEQRGLSFSDLLVEYAQDSLDRDRADGS
Ga0302180_101238333	3300031028	Palsa	RRTVVIPAVLAERLAAQADRRGLSVSDLLVEYAEIGLRRDEADD
Ga0170834_1064244833	3300031057	Forest Soil	DFVCRTVVMPVALVSRLAATAERRGLSVSDLLIEYAAAGLRREEQHD
Ga0265760_100517752	3300031090	Soil	VVLPTVLAERLAARAEGLGLSVSDLLVEYAEEGLRRDEPQAPPSVP
Ga0170824_1081387983	3300031231	Forest Soil	DDFVCRTVVMPVALVSRLAATAERRGLSVSDLLIEYAAAGLRREEQHD
Ga0302325_123429422	3300031234	Palsa	LAERLAARAEQRGLSFSDLLVEYAQDSLDRDRADGS
Ga0302326_115329502	3300031525	Palsa	PALLAERLAAWAEQRGLSFSDLLVEYAQAGLDRDRADGS
Ga0318555_102476681	3300031640	Soil	RTVVIRAVLAEQLAATAERRGLSVSDLLAEYAEQGLRNDPAARPPPG
Ga0310686_1185275292	3300031708	Soil	VLPARLAERLAARAEQRGLSFSDLLVEYAQDGLDRDGADGP
Ga0318501_105822422	3300031736	Soil	MPAVLAERLAATAERRGLSVSDLLAEYAEQGLQHDLAAR
Ga0318501_105932523	3300031736	Soil	CVRRTVVLPAQLAERLAARAEQRGLSFSDLLVEYAQDGLHRDGVDGR
Ga0318494_101319683	3300031751	Soil	RRTVVMPTELAERLAAEAERRELSVSDLLVEYAEEGLRRDAPNGVP
Ga0318494_103192663	3300031751	Soil	RRTGVMPAALAERLAAEAERRELSVSDLLVEYAEEGLRRDTPDSVP
Ga0318535_103093941	3300031764	Soil	AELLADRAERRGLSVSDLLAEYAEEGLRRDGADGPGS
Ga0318521_103983712	3300031770	Soil	AALAELLADRAERRGLSVSDLLAEYAEEGLRRDGADGPGS
Ga0318546_112926041	3300031771	Soil	LAERLAARAEQRGLSVSDLLTEYAEEGLRRDGPGVG
Ga0318576_103932032	3300031796	Soil	MPAALAERLAATAERRGLSVGDLLAEYAEQGLQHDPAAR
Ga0318523_100755844	3300031798	Soil	TVVMPTALAERLAAEAERRELSVSDLLVEYAEEGLRRDAPNGVP
Ga0318565_104249473	3300031799	Soil	VRPERLAARAEQRGLSFSDLLVEYAQDGLHRDGADGR
Ga0318511_104546252	3300031845	Soil	MPTVLAERVAARAEQHGPSVSDLLVQYGEEGLRRDQAPG
Ga0318512_100584363	3300031846	Soil	PAALAELLADRAERRGLSVSDLLAEYAEEGLRRDGADGPGS
Ga0318512_107043551	3300031846	Soil	VLAERVAARAEQHGPSVSDLLVQYGEEGLRRDQAPG
Ga0318495_105467332	3300031860	Soil	RTVVLPALLAERLAARAEKRGLSFSDLLVEYAEDGLRRDGADGP
Ga0306919_100144001	3300031879	Soil	RRTVVLPAQLAERLAARAEQRGLSFSDLLVEYAQDGLHRDGADGR
Ga0310912_106840052	3300031941	Soil	MPAVLAERLAATAERRGLSVSDLLAEYAEQGLQHDPAAR
Ga0306922_116675192	3300032001	Soil	VVLPALLAERLAARAEKRGLSFSDLLVEYAEDGLRRDGADGP
Ga0306922_120788731	3300032001	Soil	SVRRTVVMPTELAERLAAEAERRELSVSDLLVEYAEEGLRRDTPDSVP
Ga0310911_106241921	3300032035	Soil	RRTVVMPAVLAERLAARAEQRGLSVSDLLTEYAEEGLRRDERPDVG
Ga0318559_102486601	3300032039	Soil	TVVLPAQLAERLAARAEQRGLSFSDLLVEYAQDGLHRDGVDGR
Ga0318559_102711641	3300032039	Soil	LLADRAERRGLSVSDLLAEYAEEGLRRDGADGPGS
Ga0318556_101199241	3300032043	Soil	DCVRRTVVLPALLTERLAARAEQRGLSFSDLLVEYAEDGLHRDGADRP
Ga0318524_107482752	3300032067	Soil	SVRRTVVMPAALAERLAAEAERRELSVSDLLVEYAEEGLRRDTPDSVP
Ga0348332_101743551	3300032515	Plant Litter	RRMLVLPARLAERLAAQAEQRGLSLSDLLVEYAQDGLEHDGADGP
Ga0348332_135131142	3300032515	Plant Litter	VLPTLLAERIAAQAEQRGLSFSDLLVEYAQDGLRRDGAAGR
Ga0335081_112403672	3300032892	Soil	RRTVVMPTVLAERLAATAERRGLSVSDLLVEYAREGLRRDGPGG
Ga0310914_117867112	3300033289	Soil	TVVLPTLLAERIAARAEQRGLSFSDLLVEYAQDGLRRDGAVGQ

Hidden Markov Model


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