Basic Information | |
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Family ID | F051520 |
Family Type | Metagenome / Metatranscriptome |
Number of Sequences | 144 |
Average Sequence Length | 97 residues |
Representative Sequence | MLGARTLVAVLVLFHVGLLTVAAVQSADFAWVPSYFDDDDGDFLPLLLSEQMSALVEPARGWMPALVVLAAVLGWRPRPRPYLVAAPARFRAPPCP |
Number of Associated Samples | 133 |
Number of Associated Scaffolds | 144 |
Quality Assessment | |
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Transcriptomic Evidence | Yes |
Most common taxonomic group | Bacteria |
% of genes with valid RBS motifs | 71.53 % |
% of genes near scaffold ends (potentially truncated) | 43.75 % |
% of genes from short scaffolds (< 2000 bps) | 76.39 % |
Associated GOLD sequencing projects | 119 |
AlphaFold2 3D model prediction | No |
Hidden Markov Model |
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Most Common Taxonomy | |
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Group | Bacteria (76.389 % of family members) |
NCBI Taxonomy ID | 2 |
Taxonomy | All Organisms → cellular organisms → Bacteria |
Most Common Ecosystem | |
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GOLD Ecosystem | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (12.500 % of family members) |
Environment Ontology (ENVO) | Unclassified (32.639 % of family members) |
Earth Microbiome Project Ontology (EMPO) | Host-associated → Plant → Plant rhizosphere (38.194 % of family members) |
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Predicted Topology & Secondary Structure | |||||
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Classification: | Transmembrane (alpha-helical) | Signal Peptide: | Yes | Secondary Structure distribution: | α-helix: 48.96% β-sheet: 0.00% Coil/Unstructured: 51.04% | Feature Viewer |
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Pfam ID | Name | % Frequency in 144 Family Scaffolds |
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PF02416 | TatA_B_E | 52.08 |
PF09335 | SNARE_assoc | 11.81 |
PF04239 | DUF421 | 9.03 |
PF13520 | AA_permease_2 | 8.33 |
PF13714 | PEP_mutase | 2.78 |
PF00583 | Acetyltransf_1 | 2.08 |
PF00313 | CSD | 0.69 |
PF07690 | MFS_1 | 0.69 |
PF01250 | Ribosomal_S6 | 0.69 |
PF01113 | DapB_N | 0.69 |
PF02954 | HTH_8 | 0.69 |
COG ID | Name | Functional Category | % Frequency in 144 Family Scaffolds |
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COG1826 | Twin-arginine protein secretion pathway components TatA and TatB | Intracellular trafficking, secretion, and vesicular transport [U] | 52.08 |
COG0398 | Uncharacterized membrane protein YdjX, related to fungal oxalate transporter, TVP38/TMEM64 family | Function unknown [S] | 11.81 |
COG0586 | Membrane integrity protein DedA, putative transporter, DedA/Tvp38 family | Cell wall/membrane/envelope biogenesis [M] | 11.81 |
COG1238 | Uncharacterized membrane protein YqaA, VTT domain | Function unknown [S] | 11.81 |
COG2323 | Uncharacterized membrane protein YcaP, DUF421 family | Function unknown [S] | 9.03 |
COG0360 | Ribosomal protein S6 | Translation, ribosomal structure and biogenesis [J] | 0.69 |
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Name | Rank | Taxonomy | Distribution |
All Organisms | root | All Organisms | 76.39 % |
Unclassified | root | N/A | 23.61 % |
Visualization |
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Scaffold | Taxonomy | Length | IMG/M Link |
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2088090015|GPICI_8957548 | All Organisms → cellular organisms → Bacteria | 5097 | Open in IMG/M |
2124908006|FWIROz_GKA24FP02JJO8F | All Organisms → cellular organisms → Bacteria | 513 | Open in IMG/M |
2162886012|MBSR1b_contig_5390437 | All Organisms → cellular organisms → Bacteria | 1290 | Open in IMG/M |
2228664021|ICCgaii200_c0880167 | All Organisms → cellular organisms → Bacteria | 1610 | Open in IMG/M |
3300001545|JGI12630J15595_10087619 | All Organisms → cellular organisms → Bacteria | 611 | Open in IMG/M |
3300002245|JGIcombinedJ26739_100275349 | All Organisms → cellular organisms → Bacteria | 1569 | Open in IMG/M |
3300002886|JGI25612J43240_1018728 | All Organisms → cellular organisms → Bacteria | 1024 | Open in IMG/M |
3300003267|soilL1_10135574 | All Organisms → cellular organisms → Bacteria | 1907 | Open in IMG/M |
3300003324|soilH2_10084553 | All Organisms → cellular organisms → Bacteria | 8876 | Open in IMG/M |
3300004114|Ga0062593_100023808 | All Organisms → cellular organisms → Bacteria | 3317 | Open in IMG/M |
3300004479|Ga0062595_100772983 | All Organisms → cellular organisms → Bacteria | 786 | Open in IMG/M |
3300004643|Ga0062591_100006352 | All Organisms → cellular organisms → Bacteria | 4627 | Open in IMG/M |
3300004803|Ga0058862_11974786 | Not Available | 584 | Open in IMG/M |
3300005293|Ga0065715_10278480 | Not Available | 1092 | Open in IMG/M |
3300005341|Ga0070691_10001170 | All Organisms → cellular organisms → Bacteria | 10954 | Open in IMG/M |
3300005341|Ga0070691_10117082 | Not Available | 1338 | Open in IMG/M |
3300005354|Ga0070675_100554076 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia | 1040 | Open in IMG/M |
3300005406|Ga0070703_10096419 | All Organisms → cellular organisms → Bacteria | 1035 | Open in IMG/M |
3300005439|Ga0070711_100065827 | All Organisms → cellular organisms → Bacteria | 2536 | Open in IMG/M |
3300005440|Ga0070705_100446084 | All Organisms → cellular organisms → Bacteria | 969 | Open in IMG/M |
3300005441|Ga0070700_100044817 | All Organisms → cellular organisms → Bacteria | 2726 | Open in IMG/M |
3300005445|Ga0070708_100106999 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria | 2567 | Open in IMG/M |
3300005467|Ga0070706_100004560 | All Organisms → cellular organisms → Bacteria | 13311 | Open in IMG/M |
3300005468|Ga0070707_100018914 | All Organisms → cellular organisms → Bacteria | 6486 | Open in IMG/M |
3300005535|Ga0070684_101008635 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia | 781 | Open in IMG/M |
3300005543|Ga0070672_100168411 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes | 1821 | Open in IMG/M |
3300005557|Ga0066704_10524016 | All Organisms → cellular organisms → Bacteria | 777 | Open in IMG/M |
3300005568|Ga0066703_10326086 | All Organisms → cellular organisms → Bacteria | 926 | Open in IMG/M |
3300005586|Ga0066691_10194253 | All Organisms → cellular organisms → Bacteria | 1180 | Open in IMG/M |
3300005615|Ga0070702_101576424 | Not Available | 542 | Open in IMG/M |
3300005616|Ga0068852_100333186 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia | 1477 | Open in IMG/M |
3300006050|Ga0075028_100022371 | All Organisms → cellular organisms → Bacteria | 2806 | Open in IMG/M |
3300006057|Ga0075026_100288598 | All Organisms → cellular organisms → Bacteria | 892 | Open in IMG/M |
3300006058|Ga0075432_10383362 | Not Available | 603 | Open in IMG/M |
3300006163|Ga0070715_10087756 | All Organisms → cellular organisms → Bacteria | 1425 | Open in IMG/M |
3300006358|Ga0068871_101467812 | All Organisms → cellular organisms → Bacteria | 644 | Open in IMG/M |
3300006755|Ga0079222_10152462 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes | 1316 | Open in IMG/M |
3300006755|Ga0079222_10153876 | All Organisms → cellular organisms → Bacteria | 1312 | Open in IMG/M |
3300006806|Ga0079220_10452707 | All Organisms → cellular organisms → Bacteria | 859 | Open in IMG/M |
3300006854|Ga0075425_101358944 | All Organisms → cellular organisms → Bacteria | 804 | Open in IMG/M |
3300006904|Ga0075424_100073749 | All Organisms → cellular organisms → Bacteria | 3575 | Open in IMG/M |
3300006954|Ga0079219_10026309 | All Organisms → cellular organisms → Bacteria | 2237 | Open in IMG/M |
3300006954|Ga0079219_10181751 | All Organisms → cellular organisms → Bacteria | 1167 | Open in IMG/M |
3300007258|Ga0099793_10135053 | All Organisms → cellular organisms → Bacteria | 1162 | Open in IMG/M |
3300009038|Ga0099829_10099834 | All Organisms → cellular organisms → Bacteria | 2256 | Open in IMG/M |
3300009088|Ga0099830_10522502 | All Organisms → cellular organisms → Bacteria | 969 | Open in IMG/M |
3300009089|Ga0099828_10607646 | All Organisms → cellular organisms → Bacteria | 984 | Open in IMG/M |
3300009143|Ga0099792_11034925 | Not Available | 550 | Open in IMG/M |
3300009148|Ga0105243_10504742 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes | 1147 | Open in IMG/M |
3300009148|Ga0105243_12045280 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 608 | Open in IMG/M |
3300009162|Ga0075423_13051411 | Not Available | 513 | Open in IMG/M |
3300010359|Ga0126376_12566244 | Not Available | 558 | Open in IMG/M |
3300010375|Ga0105239_10995598 | Not Available | 964 | Open in IMG/M |
3300010400|Ga0134122_10369780 | All Organisms → cellular organisms → Bacteria | 1255 | Open in IMG/M |
3300010403|Ga0134123_10696528 | All Organisms → cellular organisms → Bacteria | 993 | Open in IMG/M |
3300011120|Ga0150983_16545735 | All Organisms → cellular organisms → Bacteria | 905 | Open in IMG/M |
3300011269|Ga0137392_10111581 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria | 2170 | Open in IMG/M |
3300012202|Ga0137363_10010094 | All Organisms → cellular organisms → Bacteria | 6017 | Open in IMG/M |
3300012211|Ga0137377_10009350 | All Organisms → cellular organisms → Bacteria | 8131 | Open in IMG/M |
3300012349|Ga0137387_11279723 | Not Available | 514 | Open in IMG/M |
3300012912|Ga0157306_10108774 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes | 816 | Open in IMG/M |
3300012931|Ga0153915_10413819 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes | 1528 | Open in IMG/M |
3300012931|Ga0153915_10947911 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 1002 | Open in IMG/M |
3300012958|Ga0164299_10016638 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes | 2908 | Open in IMG/M |
3300012960|Ga0164301_11280038 | Not Available | 593 | Open in IMG/M |
3300012984|Ga0164309_11700816 | Not Available | 541 | Open in IMG/M |
3300012986|Ga0164304_10124781 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes | 1580 | Open in IMG/M |
3300012989|Ga0164305_10247582 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes | 1285 | Open in IMG/M |
3300013102|Ga0157371_10055977 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria | 2797 | Open in IMG/M |
3300013105|Ga0157369_10689378 | All Organisms → cellular organisms → Bacteria | 1052 | Open in IMG/M |
3300013306|Ga0163162_10243367 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes | 1930 | Open in IMG/M |
3300015077|Ga0173483_10731272 | Not Available | 563 | Open in IMG/M |
3300015371|Ga0132258_13521669 | All Organisms → cellular organisms → Bacteria | 1072 | Open in IMG/M |
3300015372|Ga0132256_101394105 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 813 | Open in IMG/M |
3300015373|Ga0132257_103288164 | Not Available | 588 | Open in IMG/M |
3300017927|Ga0187824_10016158 | All Organisms → cellular organisms → Bacteria | 2176 | Open in IMG/M |
3300017930|Ga0187825_10331914 | Not Available | 572 | Open in IMG/M |
3300017936|Ga0187821_10319503 | Not Available | 620 | Open in IMG/M |
3300017994|Ga0187822_10009977 | All Organisms → cellular organisms → Bacteria | 2252 | Open in IMG/M |
3300019877|Ga0193722_1018118 | All Organisms → cellular organisms → Bacteria | 1816 | Open in IMG/M |
3300019879|Ga0193723_1084360 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes | 908 | Open in IMG/M |
3300019881|Ga0193707_1045962 | All Organisms → cellular organisms → Bacteria | 1400 | Open in IMG/M |
3300019887|Ga0193729_1053957 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes | 1626 | Open in IMG/M |
3300020002|Ga0193730_1011892 | All Organisms → cellular organisms → Bacteria | 2472 | Open in IMG/M |
3300020021|Ga0193726_1046995 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes | 2073 | Open in IMG/M |
3300020022|Ga0193733_1021901 | All Organisms → cellular organisms → Bacteria | 1806 | Open in IMG/M |
3300020070|Ga0206356_11847536 | Not Available | 769 | Open in IMG/M |
3300020579|Ga0210407_10009709 | All Organisms → cellular organisms → Bacteria | 7192 | Open in IMG/M |
3300021168|Ga0210406_11039431 | Not Available | 607 | Open in IMG/M |
3300021418|Ga0193695_1017524 | All Organisms → cellular organisms → Bacteria | 1487 | Open in IMG/M |
3300022467|Ga0224712_10591355 | Not Available | 541 | Open in IMG/M |
3300022525|Ga0242656_1015150 | All Organisms → cellular organisms → Bacteria | 1091 | Open in IMG/M |
3300022533|Ga0242662_10109459 | All Organisms → cellular organisms → Bacteria | 797 | Open in IMG/M |
3300022724|Ga0242665_10155446 | Not Available | 726 | Open in IMG/M |
3300022726|Ga0242654_10138193 | All Organisms → cellular organisms → Bacteria | 803 | Open in IMG/M |
3300025885|Ga0207653_10069792 | All Organisms → cellular organisms → Bacteria | 1199 | Open in IMG/M |
3300025905|Ga0207685_10372802 | All Organisms → cellular organisms → Bacteria | 725 | Open in IMG/M |
3300025910|Ga0207684_10009612 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria | 8531 | Open in IMG/M |
3300025916|Ga0207663_11179429 | All Organisms → cellular organisms → Bacteria | 616 | Open in IMG/M |
3300025922|Ga0207646_10167111 | All Organisms → cellular organisms → Bacteria | 1986 | Open in IMG/M |
3300025922|Ga0207646_11803617 | Not Available | 523 | Open in IMG/M |
3300025926|Ga0207659_10514303 | All Organisms → cellular organisms → Bacteria | 1015 | Open in IMG/M |
3300025938|Ga0207704_10294650 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes | 1240 | Open in IMG/M |
3300025981|Ga0207640_10000599 | All Organisms → cellular organisms → Bacteria | 21444 | Open in IMG/M |
3300026005|Ga0208285_1002695 | Not Available | 1097 | Open in IMG/M |
3300026285|Ga0209438_1002809 | All Organisms → cellular organisms → Bacteria | 5840 | Open in IMG/M |
3300026359|Ga0257163_1028716 | Not Available | 872 | Open in IMG/M |
3300026361|Ga0257176_1001584 | All Organisms → cellular organisms → Bacteria | 2055 | Open in IMG/M |
3300026508|Ga0257161_1030305 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes | 1060 | Open in IMG/M |
3300026515|Ga0257158_1038093 | All Organisms → cellular organisms → Bacteria | 863 | Open in IMG/M |
3300026557|Ga0179587_10107791 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes | 1694 | Open in IMG/M |
3300027605|Ga0209329_1051422 | All Organisms → cellular organisms → Bacteria | 878 | Open in IMG/M |
3300027651|Ga0209217_1045121 | All Organisms → cellular organisms → Bacteria | 1342 | Open in IMG/M |
3300027727|Ga0209328_10231433 | Not Available | 554 | Open in IMG/M |
3300027765|Ga0209073_10043014 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria | 1455 | Open in IMG/M |
3300027765|Ga0209073_10247888 | All Organisms → cellular organisms → Bacteria | 691 | Open in IMG/M |
3300027765|Ga0209073_10371323 | Not Available | 581 | Open in IMG/M |
3300027775|Ga0209177_10011158 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 2017 | Open in IMG/M |
3300027775|Ga0209177_10217807 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium | 688 | Open in IMG/M |
3300027862|Ga0209701_10314940 | All Organisms → cellular organisms → Bacteria | 895 | Open in IMG/M |
3300027903|Ga0209488_10144953 | All Organisms → cellular organisms → Bacteria | 1792 | Open in IMG/M |
3300028047|Ga0209526_10031554 | All Organisms → cellular organisms → Bacteria | 3723 | Open in IMG/M |
3300028592|Ga0247822_11819674 | Not Available | 520 | Open in IMG/M |
3300028792|Ga0307504_10161050 | Not Available | 769 | Open in IMG/M |
3300031152|Ga0307501_10032079 | All Organisms → cellular organisms → Bacteria | 1082 | Open in IMG/M |
(restricted) 3300031197|Ga0255310_10036354 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes | 1275 | Open in IMG/M |
(restricted) 3300031248|Ga0255312_1160912 | Not Available | 561 | Open in IMG/M |
3300031547|Ga0310887_10737779 | Not Available | 614 | Open in IMG/M |
3300031820|Ga0307473_10668716 | Not Available | 725 | Open in IMG/M |
3300031944|Ga0310884_10613704 | Not Available | 651 | Open in IMG/M |
3300031962|Ga0307479_10020259 | All Organisms → cellular organisms → Bacteria | 6282 | Open in IMG/M |
3300032174|Ga0307470_10169330 | All Organisms → cellular organisms → Bacteria | 1360 | Open in IMG/M |
3300032180|Ga0307471_100485126 | All Organisms → cellular organisms → Bacteria | 1381 | Open in IMG/M |
3300032205|Ga0307472_100148406 | All Organisms → cellular organisms → Bacteria | 1708 | Open in IMG/M |
3300032829|Ga0335070_12123752 | Not Available | 504 | Open in IMG/M |
3300033412|Ga0310810_10013395 | All Organisms → cellular organisms → Bacteria | 9676 | Open in IMG/M |
3300033432|Ga0326729_1012347 | All Organisms → cellular organisms → Bacteria | 1474 | Open in IMG/M |
3300033433|Ga0326726_10127372 | All Organisms → cellular organisms → Bacteria | 2304 | Open in IMG/M |
3300033433|Ga0326726_10249060 | All Organisms → cellular organisms → Bacteria | 1653 | Open in IMG/M |
3300033486|Ga0316624_10218120 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes | 1490 | Open in IMG/M |
3300033500|Ga0326730_1002206 | All Organisms → cellular organisms → Bacteria | 4553 | Open in IMG/M |
3300033513|Ga0316628_100460972 | Not Available | 1631 | Open in IMG/M |
3300033513|Ga0316628_100926074 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes | 1154 | Open in IMG/M |
3300034817|Ga0373948_0096211 | Not Available | 692 | Open in IMG/M |
Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
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Habitat | Taxonomy | Distribution |
Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil | 12.50% |
Corn, Switchgrass And Miscanthus Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere | 11.81% |
Vadose Zone Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil | 8.33% |
Agricultural Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil | 6.94% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil | 6.94% |
Forest Soil | Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil | 4.86% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil | 3.47% |
Hardwood Forest Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil | 3.47% |
Freshwater Sediment | Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment | 2.78% |
Soil | Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil | 2.78% |
Peat Soil | Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil | 2.78% |
Populus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere | 2.78% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil | 2.08% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil | 2.08% |
Miscanthus Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere | 2.08% |
Freshwater Wetlands | Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands | 1.39% |
Watersheds | Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds | 1.39% |
Terrestrial Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil | 1.39% |
Corn, Switchgrass And Miscanthus Rhizosphere | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere | 1.39% |
Sugarcane Root And Bulk Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil | 1.39% |
Grasslands Soil | Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil | 1.39% |
Sandy Soil | Environmental → Terrestrial → Soil → Sand → Unclassified → Sandy Soil | 1.39% |
Arabidopsis Rhizosphere | Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere | 1.39% |
Miscanthus Rhizosphere | Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere | 1.39% |
Corn Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere | 1.39% |
Miscanthus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere | 1.39% |
Corn Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere | 1.39% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil | 0.69% |
Tropical Forest Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil | 0.69% |
Rice Paddy Soil | Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil | 0.69% |
Corn Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere | 0.69% |
Host-Associated | Host-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated | 0.69% |
Miscanthus Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere | 0.69% |
Switchgrass Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere | 0.69% |
Miscanthus Rhizosphere | Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere | 0.69% |
Corn Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere | 0.69% |
Rhizosphere Soil | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil | 0.69% |
Arabidopsis Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere | 0.69% |
Visualization |
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Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
Taxon OID | Sample Name | Habitat Type | IMG/M Link |
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2088090015 | Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil | Environmental | Open in IMG/M |
2124908006 | Soil microbial communities from sample at FACE Site Metagenome WIR_Oz2 | Environmental | Open in IMG/M |
2162886012 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 | Host-Associated | Open in IMG/M |
2228664021 | Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil | Environmental | Open in IMG/M |
3300001545 | Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 | Environmental | Open in IMG/M |
3300002245 | Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027) | Environmental | Open in IMG/M |
3300002886 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_20cm | Environmental | Open in IMG/M |
3300003267 | Sugarcane bulk soil Sample L1 | Environmental | Open in IMG/M |
3300003324 | Sugarcane bulk soil Sample H2 | Environmental | Open in IMG/M |
3300004114 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5 | Environmental | Open in IMG/M |
3300004479 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs | Environmental | Open in IMG/M |
3300004643 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3 | Environmental | Open in IMG/M |
3300004803 | Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-2 (Metagenome Metatranscriptome) | Host-Associated | Open in IMG/M |
3300005293 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 | Host-Associated | Open in IMG/M |
3300005341 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG | Environmental | Open in IMG/M |
3300005354 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG | Host-Associated | Open in IMG/M |
3300005406 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG | Environmental | Open in IMG/M |
3300005439 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG | Environmental | Open in IMG/M |
3300005440 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG | Environmental | Open in IMG/M |
3300005441 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG | Environmental | Open in IMG/M |
3300005445 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG | Environmental | Open in IMG/M |
3300005467 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG | Environmental | Open in IMG/M |
3300005468 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG | Environmental | Open in IMG/M |
3300005535 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG | Environmental | Open in IMG/M |
3300005543 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG | Host-Associated | Open in IMG/M |
3300005557 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153 | Environmental | Open in IMG/M |
3300005568 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152 | Environmental | Open in IMG/M |
3300005586 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140 | Environmental | Open in IMG/M |
3300005615 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG | Environmental | Open in IMG/M |
3300005616 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 | Host-Associated | Open in IMG/M |
3300006050 | Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014 | Environmental | Open in IMG/M |
3300006057 | Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2012 | Environmental | Open in IMG/M |
3300006058 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 | Host-Associated | Open in IMG/M |
3300006163 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG | Environmental | Open in IMG/M |
3300006358 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 | Host-Associated | Open in IMG/M |
3300006755 | Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter | Environmental | Open in IMG/M |
3300006806 | Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100 | Environmental | Open in IMG/M |
3300006854 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4 | Host-Associated | Open in IMG/M |
3300006904 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3 | Host-Associated | Open in IMG/M |
3300006954 | Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control | Environmental | Open in IMG/M |
3300007258 | Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3 | Environmental | Open in IMG/M |
3300009038 | Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG | Environmental | Open in IMG/M |
3300009088 | Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG | Environmental | Open in IMG/M |
3300009089 | Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG | Environmental | Open in IMG/M |
3300009143 | Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 | Environmental | Open in IMG/M |
3300009148 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG | Host-Associated | Open in IMG/M |
3300009162 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2 | Host-Associated | Open in IMG/M |
3300010359 | Tropical forest soil microbial communities from Panama - MetaG Plot_15 | Environmental | Open in IMG/M |
3300010375 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG | Host-Associated | Open in IMG/M |
3300010400 | Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2 | Environmental | Open in IMG/M |
3300010403 | Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3 | Environmental | Open in IMG/M |
3300011120 | Combined assembly of Microbial Forest Soil metaT | Environmental | Open in IMG/M |
3300011269 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG | Environmental | Open in IMG/M |
3300012202 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG | Environmental | Open in IMG/M |
3300012211 | Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG | Environmental | Open in IMG/M |
3300012349 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG | Environmental | Open in IMG/M |
3300012912 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S163-409C-2 | Environmental | Open in IMG/M |
3300012931 | Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 3 metaG | Environmental | Open in IMG/M |
3300012958 | Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG | Environmental | Open in IMG/M |
3300012960 | Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG | Environmental | Open in IMG/M |
3300012984 | Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG | Environmental | Open in IMG/M |
3300012986 | Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG | Environmental | Open in IMG/M |
3300012989 | Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG | Environmental | Open in IMG/M |
3300013102 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG | Host-Associated | Open in IMG/M |
3300013105 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG | Host-Associated | Open in IMG/M |
3300013306 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG | Host-Associated | Open in IMG/M |
3300015077 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2 (version 2) | Environmental | Open in IMG/M |
3300015371 | Combined assembly of cpr5 and col0 rhizosphere and soil | Host-Associated | Open in IMG/M |
3300015372 | Soil combined assembly | Host-Associated | Open in IMG/M |
3300015373 | Combined assembly of cpr5 rhizosphere | Host-Associated | Open in IMG/M |
3300017927 | Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_4 | Environmental | Open in IMG/M |
3300017930 | Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_5 | Environmental | Open in IMG/M |
3300017936 | Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_1 | Environmental | Open in IMG/M |
3300017994 | Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_2 | Environmental | Open in IMG/M |
3300019877 | Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2m1 | Environmental | Open in IMG/M |
3300019879 | Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2m2 | Environmental | Open in IMG/M |
3300019881 | Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3c2 | Environmental | Open in IMG/M |
3300019887 | Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c2 | Environmental | Open in IMG/M |
3300020002 | Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1a1 | Environmental | Open in IMG/M |
3300020021 | Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2c1 | Environmental | Open in IMG/M |
3300020022 | Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1s2 | Environmental | Open in IMG/M |
3300020070 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2) | Environmental | Open in IMG/M |
3300020579 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M | Environmental | Open in IMG/M |
3300021168 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M | Environmental | Open in IMG/M |
3300021418 | Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3s2 | Environmental | Open in IMG/M |
3300022467 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) | Environmental | Open in IMG/M |
3300022525 | Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-4-M (Metagenome Metatranscriptome) (v2) | Environmental | Open in IMG/M |
3300022533 | Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-7-M (Metagenome Metatranscriptome) (v2) | Environmental | Open in IMG/M |
3300022724 | Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-17-M (Metagenome Metatranscriptome) (v2) | Environmental | Open in IMG/M |
3300022726 | Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-M (Metagenome Metatranscriptome) (v2) | Environmental | Open in IMG/M |
3300025885 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) | Environmental | Open in IMG/M |
3300025905 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) | Environmental | Open in IMG/M |
3300025910 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) | Environmental | Open in IMG/M |
3300025916 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) | Environmental | Open in IMG/M |
3300025922 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) | Environmental | Open in IMG/M |
3300025926 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300025938 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) | Host-Associated | Open in IMG/M |
3300025981 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) | Host-Associated | Open in IMG/M |
3300026005 | Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_25C_0N_101 (SPAdes) | Environmental | Open in IMG/M |
3300026285 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_20cm (SPAdes) | Environmental | Open in IMG/M |
3300026359 | Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-06-A | Environmental | Open in IMG/M |
3300026361 | Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-03-B | Environmental | Open in IMG/M |
3300026508 | Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-01-A | Environmental | Open in IMG/M |
3300026515 | Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-03-A | Environmental | Open in IMG/M |
3300026557 | Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal | Environmental | Open in IMG/M |
3300027605 | Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_M3 (SPAdes) | Environmental | Open in IMG/M |
3300027651 | Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M2 (SPAdes) | Environmental | Open in IMG/M |
3300027727 | Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M1 (SPAdes) | Environmental | Open in IMG/M |
3300027765 | Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100 (SPAdes) | Environmental | Open in IMG/M |
3300027775 | Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control (SPAdes) | Environmental | Open in IMG/M |
3300027862 | Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes) | Environmental | Open in IMG/M |
3300027903 | Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes) | Environmental | Open in IMG/M |
3300028047 | Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes) | Environmental | Open in IMG/M |
3300028592 | Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Cellulose_Day30 | Environmental | Open in IMG/M |
3300028792 | Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 19_S | Environmental | Open in IMG/M |
3300031152 | Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 15_S | Environmental | Open in IMG/M |
3300031197 (restricted) | Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - EtOH1_T0_E1 | Environmental | Open in IMG/M |
3300031248 (restricted) | Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - EtOH5_T0_E5 | Environmental | Open in IMG/M |
3300031547 | Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D4 | Environmental | Open in IMG/M |
3300031820 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515 | Environmental | Open in IMG/M |
3300031944 | Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D1 | Environmental | Open in IMG/M |
3300031962 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515 | Environmental | Open in IMG/M |
3300032174 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05 | Environmental | Open in IMG/M |
3300032180 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515 | Environmental | Open in IMG/M |
3300032205 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05 | Environmental | Open in IMG/M |
3300032829 | Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.3 | Environmental | Open in IMG/M |
3300033412 | Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC | Environmental | Open in IMG/M |
3300033432 | Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF6AY SIP fraction | Environmental | Open in IMG/M |
3300033433 | Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MN | Environmental | Open in IMG/M |
3300033486 | Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_N3_C1_D5_A | Environmental | Open in IMG/M |
3300033500 | Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF7AN SIP fraction | Environmental | Open in IMG/M |
3300033513 | Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D5_C | Environmental | Open in IMG/M |
3300034817 | Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_1 | Host-Associated | Open in IMG/M |
Geographical Distribution | |
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Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
Protein ID | Sample Taxon ID | Habitat | Sequence |
GPICI_02408270 | 2088090015 | Soil | MLGSRTLLAVLVLLHVGLTSAAALQSVDFAWVPSYFDDDDGDFLPLLLSEQSPALLAPVRDWTPVLIALAAILTGRLVGRVRPAATPARFRAPPCR |
FWIROz_02444750 | 2124908006 | Soil | MLGARTLVAVLVLFHVGLLTVAAVQPADFAWAPSYFDDDDGDFLPLLLSEQMSALVEPARGWMPALIVLAAVLGWRPQPRPYLVAVPARFRA |
MBSR1b_0708.00003690 | 2162886012 | Miscanthus Rhizosphere | MLGSRTLLAVLVLLHVGVTSAAALQSVDFAWVPSYFDDDDGDFLPLLLSEQSPALLAPVRDWTPVLIALAAILTGRLVGRVRPAATPARFRAPPCR |
ICCgaii200_08801672 | 2228664021 | Soil | LTPERRGRRLGAMLGSRTLLAVLVLLHVGLTSAAALQSVDFAWVPSYFDDDDGDFLPLLLSEQSPALLAPVRDWTPVLIALAAILTGRLVGRVRPAATPARFRAPPCR |
JGI12630J15595_100876191 | 3300001545 | Forest Soil | MLGARTLVAVLVLFHVGLLTAAAVQSADFAWVPSYFDDDDGDFLPLLLSEQMSALVEPARGWMPALIVLATVLGWRPRPRP |
JGIcombinedJ26739_1002753493 | 3300002245 | Forest Soil | MLGARTLVAVLVLFHVGLLTAAAVQSADFAWVPSYFDDDDGDFLPLLLSEQMSALVEPARGWMPALIVLAAVLGWRPRPRPYLVAAPARLRAPPCP* |
JGI25612J43240_10187282 | 3300002886 | Grasslands Soil | MLGARTLVAVLVLFHVGLLTVAAVQSADFAWVPSYFDDDDGDFLPLLLSEQMSALVEPARGWMPALIVLAVVLGWRPRPRPYLVAAPARFRAPPCP* |
soilL1_101355742 | 3300003267 | Sugarcane Root And Bulk Soil | MLGSRTILAVLVLLHVGLASAAVLQSVDFAWVPSYFDDDDGDFLPLLLSEQTPALLARVRDWIPVLIALAAVLTGSLVGRVRPAAAPARFRAPPCR* |
soilH2_100845533 | 3300003324 | Sugarcane Root And Bulk Soil | MLGSRTILAVLVLLHVGLASAAVLQSVDFAWVPSYFDDDDGDFLPLLLSEQTPALLARVRDWIPVLIALAAVLTGRLVGRVRPAAAPARFRAPPCR* |
Ga0062593_1000238083 | 3300004114 | Soil | LTPERRGRRLGAMLGSRTLLAVLVLLHVGLTSAAALQSVDFAWVPSYFDDDDGDFLPLLLSEQSPALLAPVRDWTPVLIALAAILTGRLVGRVRPAATPARFRAPPCR* |
Ga0062595_1007729832 | 3300004479 | Soil | MLGARTLVAVLVLFHVGLLTAATVQSVDFAWVPSYFDDDDGDFLPLLLSEQMSALVEPARGWMPALIVLAAVLGWRPRPRPYLVAAPARFRAPPCP* |
Ga0062591_1000063526 | 3300004643 | Soil | LTPERRGRRLGAMLGSRTLLAVLVLLHVGLTSAAALQSVDFAWVPSYFDDDDGDFLPLLLSEQSPALLAPVRDWTPVLIALAAILTGRLVGR |
Ga0058862_119747861 | 3300004803 | Host-Associated | TLVAVLVLFHVGLGTAAAVQSTDFAWVPSYFDDDDGDFLPLLLSEQSPALLAPVRDWTPVLIALAAILTGRLVGRVRPAATPARFRAPPCR* |
Ga0065715_102784802 | 3300005293 | Miscanthus Rhizosphere | LTPERRGRRLGAMLGSRTLLAVLVLLHVGVTSAAALQSVDFAWVPSYFDDDDGDFLPLLLSEQSPALLAPVRDWTPVLIALAAILTGRLVGRVRPAATPARFRAPP |
Ga0070691_1000117013 | 3300005341 | Corn, Switchgrass And Miscanthus Rhizosphere | LTPERRGRRLGAMLGSRTLLAVLVLLHVGLTSAAALQSVDFAWVPSYFDDDDGDFLPLLLSEQSPALLAPVRDWTPVLIALAAILTGRLVGRVRPAAT |
Ga0070691_101170821 | 3300005341 | Corn, Switchgrass And Miscanthus Rhizosphere | MLGARILVTLLVLFHLGLATVATFHSADFAWVPSYFDDDDGDFLPLLLAEQMPALVDPGRGWTPALIVLAAIAGWRPPSRLRLAAARVRFRAPPCP* |
Ga0070675_1005540763 | 3300005354 | Miscanthus Rhizosphere | GRRLGAMLGSRTLLAVLVLLHVGLTSAAALQSVDFAWVPSYFDDDDGDFLPLLLSEQSPALLAPVRDWTPVLIALAAILTGRLVGRVRPAATPARFRAPPCR* |
Ga0070703_100964192 | 3300005406 | Corn, Switchgrass And Miscanthus Rhizosphere | MLGARTLVAVLVLFHVGLLTVAAVQSTDFAWVPSYFDDDDGDFLPLLLSEQMSALVEPARGWMPALIVLAVVLGWRPRPRPYLVATPARFRAPPCP* |
Ga0070711_1000658273 | 3300005439 | Corn, Switchgrass And Miscanthus Rhizosphere | MLGARTLVAVLVLFHVGLVTVAAIQSTDFAWVPSYFDDDDGDFLPLLLAEQMPALFEPGHGWTPALVVLAAVVGWRPPSRPYQAATPARFRALPVSSLLPR* |
Ga0070705_1004460842 | 3300005440 | Corn, Switchgrass And Miscanthus Rhizosphere | MLGARTLVAVLVLFHVGLVTVAAIQSTDFAWVPSYFDDDDGDFLPLLLAEQMPALFEPGHGWTPALVVLAAVVGWRPPSRPYQAATPARFRAPPVSSLLPR* |
Ga0070700_1000448173 | 3300005441 | Corn, Switchgrass And Miscanthus Rhizosphere | GSEPNLTPERRGRRLGAMLGSRTLLAVLVLLHVGLTSAAALQSVDFAWVPSYFDDDDGDFLPLLLSEQSPALLAPVRDWTPVLIALAAILTGRLVGRVRPAATPARFRAPPCR* |
Ga0070708_1001069991 | 3300005445 | Corn, Switchgrass And Miscanthus Rhizosphere | MLGARTLVAVLVLFHVGLVTVAAVQSTDFAWAPSYFDDDDGDFLPLLLSEQMSALIEPARGWMPALIVLAAVVGWRPLTRPYLVAAPARFRAPPCP* |
Ga0070706_10000456012 | 3300005467 | Corn, Switchgrass And Miscanthus Rhizosphere | MLGARTLVAVLVLFHVGLVTVAAIQSTDFAWVPSYFDDDDGDFLPLLLAEQMPALFEPGHGWTPALVVLAAVVGCRPRGRPYQAATPARFRAPPVSSLLPR* |
Ga0070707_1000189143 | 3300005468 | Corn, Switchgrass And Miscanthus Rhizosphere | MLGARTLVAVLVLFHVGLVTVAAIQSTDFAWVPSYFDDDDGDFLPLLLAEQMPALFEPGHGWTPALVVLAAVVGWRPRSRPYQAATPARFRAPPVSSLLPR* |
Ga0070684_1010086351 | 3300005535 | Corn Rhizosphere | LGAMLGSRTLLAVLVLLHVGLTSAAALQSVDFAWVPSYFDDDDGDFLPLLLSEQSPALLAPVRDWTPVLIALAAILTGRLVGRVRPAATPARFRAPPCR* |
Ga0070672_1001684113 | 3300005543 | Miscanthus Rhizosphere | MLGSRTLLAVLVLLHVGLTSAAALQSVDFAWVPSYFDDDDGDFLPLLLSEQSPALLAPVRDWTPVLIALAAILTGRLVGRVRPAATPARFRAPPCR* |
Ga0066704_105240161 | 3300005557 | Soil | MLGARTLVAVLVLFHVGLVTVAAVQSTDFAWAPSYFDDDDGDFLPLLLSEQMSALIERARGWMPALIVLVAVVGWRPLTRPYLVAAPARFRAPPCP* |
Ga0066703_103260862 | 3300005568 | Soil | MLGARTLVAVLVLFHVGLVAVAAIQSTDFAWVPSYFDDDGDFLPLLLAEQMPALFEPGHGWTPALVVLAAVVGWRPRSRPYLAATPARFRAPPVPSRLAR* |
Ga0066691_101942533 | 3300005586 | Soil | MLGARTLVAVLVLFHVGLVTVAAVQSTDFAWAPSYFDDDDGDFLPLLLSEQMSALIEPARGWMPALIVLVAVVGWRPLTRPYLVAAPARFRAPPCP* |
Ga0070702_1015764241 | 3300005615 | Corn, Switchgrass And Miscanthus Rhizosphere | PERRGRRLGAMLGSRTLLAVLVLLHVGLTSAAALQSVDFAWVPSYFDDDDGDFLPLLLSEQSPALLAPVRDWTPVLIALAAILTGRLVGRVRPAATPARFRAPPCR* |
Ga0068852_1003331861 | 3300005616 | Corn Rhizosphere | RSFPQHRTGPDGSEPNLTPERRGRRLGAMLGSRTLLAVLVLLHVGLTSAAALQSVDFAWVPSYFDDDDGDFLPLLLSEQSPALLAPVRDWTPVLIALAAILTGRLVGRVRPAATPARFRAPPCR* |
Ga0075028_1000223713 | 3300006050 | Watersheds | MLGARTLVAVLVLFHVGLLTVAAVQSVDFAWAPSYFDDDDGDFLPLLLSEQMSALVEPARVWMPALIVLAAVVGWRPRTRPYLVAVPARFRAPPCS* |
Ga0075026_1002885982 | 3300006057 | Watersheds | MLGARTLVAVLVLFHVGLLTVAAVQPADFAWAPSYFDDDDGDFLPLLLSEQMSALVEPARGWMPALIVLAAVLGWRPQPRPYLVAVPARFRAPPCP* |
Ga0075432_103833622 | 3300006058 | Populus Rhizosphere | LTPERRGRRLGAMLGSRTLLAVLVLLHVGVTSAAALQSVDFAWVPSYFDDDDGDFLPLLLSEQSPALLAPVRDWTPVLIALAAILTGRLVGRVRPAATPARFRAPPCR* |
Ga0070715_100877563 | 3300006163 | Corn, Switchgrass And Miscanthus Rhizosphere | MLGARTLVAVLVLFHVGLVTVAAIQSTDFAWVPSYFDDDDGDFLPLLLAEQMPALFEPGHGWTPALVVLAAVVGWRPRSRPYLAATPARFRAPPVPSRLAR* |
Ga0068871_1014678122 | 3300006358 | Miscanthus Rhizosphere | MLGARTLVALLVLFHVGLVTAAAVQSTDFAWAPSYFDDDDGDFLPLLLSEQMSALVEPARGWMPALIVVAAVLGWRPRPRPYLV |
Ga0079222_101524623 | 3300006755 | Agricultural Soil | MLGSRTILAVLVLLHVGLASAAVLQSVDFAWVPSYFDDDDGDFLPLLLSEQTPALLAPVRDWIPVLIALAAVLTGRLVGRVRPAATPARFRAPPCR* |
Ga0079222_101538762 | 3300006755 | Agricultural Soil | MLGARTLVAVLVLFHVGLVTVAAIQSTDFAWVPSYFDDDDGDFLPLLLAEQMPALFEPGHGWMPALVVLAAVVGWRPRSRPYLAATPARFRAPPVPSLLPR* |
Ga0079220_104527072 | 3300006806 | Agricultural Soil | MLGARTLVAVLVLFHVGLVTVAAIQSADFAWVPSYFDDDDGDFLPLLLAEQMPALFEPGHGWMPALVVLAAVVGWRPRSRPYLAATPARFRAPPVPSLLPR* |
Ga0075425_1013589442 | 3300006854 | Populus Rhizosphere | MLGARTLVAVLVLFHVGLVTVAAIQSTDFAWVPSYFDDDDGDFLPLLLAEQMPALFEPGHGWTPALVVLAAVVGWRPRSRPYLAATPARFRAPPVPSLLPR* |
Ga0075424_1000737494 | 3300006904 | Populus Rhizosphere | RGRRLGAMLGSRTLLAVLVLLHVGLTSAAALQSVDFAWVPSYFDDDDGDFLPLLLSEQSPALLAPVRDWTPVLIALAAILTGRLVGRVRPAATPARFRAPPCR* |
Ga0079219_100263093 | 3300006954 | Agricultural Soil | MLGSRTLLAVLVLLHVGLTSAAALQSVDFAWVPSYFDDDDGDFLPLLLSEQSPALLAPVRDWTPVLIALTAILTGRLVGRVRPAATPARFRAPPCR* |
Ga0079219_101817512 | 3300006954 | Agricultural Soil | MLGARALVAVLVLFHVGLVTVAAIQSADFAWVPSYFDDDDGDFLPLLLAEQMPALFEPGHGWMPALVVLAAVVGWRPRSRPYLAATPARFRAPPVPSLLPR* |
Ga0099793_101350531 | 3300007258 | Vadose Zone Soil | MLGARTLVAVLVLFHVGLVTVAAVQSADFAWAPSYFDDDDGDFLPLLLSEQMSALIEPAREWMPALIVLAAVVGWRPRTRPYLVA |
Ga0099829_100998342 | 3300009038 | Vadose Zone Soil | MLGARTLVAVLVLFHVGLVTVAAVQSADFAWAPSYFDDDDGDFLPLLLSEQMSALVEPARGWMPALIVLAVVLGWRPRPRPYLVAAPARFRAPPCP* |
Ga0099830_105225022 | 3300009088 | Vadose Zone Soil | MLGARTLVAVLVLFHVGLLTVAAVQSADFAWAPSYFDDDDGDFLPLLLSEQMSALVEPARGWMPALIVLAAVVGWRPRARPYLVAASARFRAPPCP* |
Ga0099828_106076462 | 3300009089 | Vadose Zone Soil | MLGARTLVAVLVLFHVGLVTVAAVQSADFAWAPSYFDDDDGDFLPLLLSEQMSALIEPARGWMPALIVLAAVVGWRPRTRPYLVAAPARFRAPPCP* |
Ga0099792_110349252 | 3300009143 | Vadose Zone Soil | MLGARTLVAVLVLFHVGLVTVAAVQSADFAWAPSYFDDDDGDFLPLLLSEQMSALIEPARGWMPALIVLAAVVGWRPLTRPYLVAAPARFRAPPCP* |
Ga0105243_105047421 | 3300009148 | Miscanthus Rhizosphere | MLGARTLVAVLVLFHVGLLTVAAVQPADFAWAPSYFDDDDGDFLPLLLAEQMSALVEPARGWIPALIVLAAVLGWRPRPRPYLVAVPARFRAPPCP* |
Ga0105243_120452802 | 3300009148 | Miscanthus Rhizosphere | MLGSRTLLAVLVLLHVGLTSAAALQSVDFAWVPSYFDDDDGDFLPLLLSEQSPALLAPVRDWTPVLIALAAILTGRLVGRVRPAATPARF |
Ga0075423_130514111 | 3300009162 | Populus Rhizosphere | MLGARTLVAVLVLFHVGLVTVAAIQSTDFAWVPSYFDDDGDFLPLLLAEQMPALFEPGHGWTPALVVLAAVVGWRPRSRPYLAATPARFRAPPVPSLLPR* |
Ga0126376_125662441 | 3300010359 | Tropical Forest Soil | MLGSRTLLAVLVLLHVGLASAAAVQSVDFAWIPSYFDDDDGDFLPLLLSEQTPALLAPVRDWTPLLVALAALLTGRLIGRVRPAATPARFRAPPCR* |
Ga0105239_109955982 | 3300010375 | Corn Rhizosphere | MLGSRTLLAVLVLLHVGLTSAAALQSVDFAWVPSYFDDDDGDFLPLLLSEQSPALLAPVRDWTPVLIALAAILTGRLVGRVRPAATPARFR |
Ga0134122_103697803 | 3300010400 | Terrestrial Soil | MLGARTLVAVLVLFHVGLGAAAAVQSTDFAWVPSYFDDDDGDFLPLLLSEQMSALVEPARGWMPALIVLAAVLGWRHRPRAHLVVAPARFRAPPCP* |
Ga0134123_106965282 | 3300010403 | Terrestrial Soil | MLGARTLVAVLVLFHVGLLTVAAVQPADFAWAPSYFDDDDGDFLPLLLSEQMSALVEPARVWIPALIVLAAVLGWRPRPRPYLVAVPARFRAPPCP* |
Ga0150983_165457351 | 3300011120 | Forest Soil | RRLGAMLGARTLVAVLVLFHVGLVAVAAIQSTDFAWVPSYFDDDDGDFLPLLLAEQMPALFEPGHGWTPALVVLAAVVGWRPRSRPYLAATPARFRAPPVPSLLAR* |
Ga0137392_101115814 | 3300011269 | Vadose Zone Soil | MLGARTLVAVLVLFHVGLVTVAAVQSADFAWAPSYFDDDDGDFLPLLLSEQMSALVEPARGWMPALIVLAAVVGWRPRARPYLVAASARFRAPPCP* |
Ga0137363_100100944 | 3300012202 | Vadose Zone Soil | MLGARTLVAVLVLFHVGLLTVAAVQSADFAWVPSYFDDDDGDFLPLLLSEQMSALVEPARGWMPALIVLAVVLGWRPRPRPYLVAVPARFRAPPCP* |
Ga0137377_100093506 | 3300012211 | Vadose Zone Soil | MLGARTLVAMLVLFHVGLVTVAAVQSTDFAWAPSYFDDDDGDFLPLLLSEQMSALIEPARGWMPALIVLVAVVGWRPLTRPYLVAAPARFRAPPCP* |
Ga0137387_112797232 | 3300012349 | Vadose Zone Soil | LFHVGLVTVAAVQSTDFAWAPSYFDDDDGDFLPLLLSEQMSALIEPARGWMPALIVLVAVVGWRPLTRPYLVAAPARFRAPPCP* |
Ga0157306_101087741 | 3300012912 | Soil | AAGAAVLVLLHVGLTSAAALQSVDFAWVPSYFDDDDGDFLPLLLSEQSPALLAPVRDWTPVLIALAAILTGRLVGRLRPAATPARFRAPPCR* |
Ga0153915_104138193 | 3300012931 | Freshwater Wetlands | MLGARTLVAVLVLFHVGLATVATFHTADFAWVPSYFDDDDGDFLPLLLSEQIPALVDPGRGWTPALIVLATILGWRPPSRSRFAAARVRFRAPPCP* |
Ga0153915_109479111 | 3300012931 | Freshwater Wetlands | MLGARILVTLLVLFHLGLATVATFHTADFAWVPSYFDDDDGDFLPLLLAEQMPALVEPARGWAPALIVLAAIVGWRPPSRLRLAAARVRFRAPPCP* |
Ga0164299_100166383 | 3300012958 | Soil | MLGSRTLLAVLVLLHVGLTSAAALQSVDFAWVPSYFDDDDGDFLPLLLSEQSPALLAPVRDWTPVLIALAAILTGRLVGRVRSAATPARFRAPPCR* |
Ga0164301_112800381 | 3300012960 | Soil | LGARTLVAVLVLFHVGLLTVAAGQSADFAWVPSYFDDDDGDFLPLLLSEQMSALVEPARGWMPALIVLAAVLGWRPRPRPYLVAAPARLRAPPCP* |
Ga0164309_117008161 | 3300012984 | Soil | HRTGPDGSEPNLTPERRGRRLGAMLGSRTLLAVLVLLHVGVTSAAALQSVDFAWVPSYFDDDDGDFLPLLLSEQMSALVEPARGWMPALIVLAVVLGWRPRPRPYLVAVPARFRAPPCP* |
Ga0164304_101247811 | 3300012986 | Soil | PQHRTGPDGSEPNLTPERRGRRLGAMLGSRTLLAVLVLLHVGLTSAAALQSVDFAWVPSYFDDDDGDFLPLLLSEQSPALLAPVRDWTPVLIALAAILTGRLVGRVRPAATPARFRAPPCR* |
Ga0164305_102475823 | 3300012989 | Soil | AMLGSRTLLAVLVLLHVGVTSAAALQSVDFAWVPSYFDDDDGDFLPLLLSEQSPALLAPVRDWTPVLIALAAILTGRLVGRVRPAATPARFRAPPCR* |
Ga0157371_100559771 | 3300013102 | Corn Rhizosphere | MLGSRTLLAVLVLLHVGLTSAAALQSVDFAWVPSYFDDDDGDFLPLLLSEQSPALLAPVRDWTPVLIALAAILTGRLVGRVRPA |
Ga0157369_106893781 | 3300013105 | Corn Rhizosphere | GVPLTGPRSFPQHRTGPDGSEPNLTPERRGRRLGAMLGSRTLLAVLVLLHVGLTSAAALQSVDFAWVPSYFDDDDGDFLPLLLSEQSPALLAPVRDWTPVLIALAAILTGRLVGRVRPAATPARFRAPPCR* |
Ga0163162_102433671 | 3300013306 | Switchgrass Rhizosphere | GSEPNLTPERRGRRLGAMLGSRTLLAVLVLLHVGLTSAAALQSVDFAWVPSYFDDDDGDFLPLLLSVQSPALLAPVRDWTPVLIALAAILTGRLVGRVRPAATPARFRAPPCR* |
Ga0173483_107312721 | 3300015077 | Soil | QHRTGPDGSEPNLTPERRGRRLGAMLGSRTLLAVLVLLHVGLTSAAALQSVDFAWVPSYFDDDDGDFLPLLLSEQSPALLAPVRDWTPVLIALAAILTGRLVGRVRPAATPARFRAPPCR |
Ga0132258_135216691 | 3300015371 | Arabidopsis Rhizosphere | MLGARSLVVLLLLFHVGLATAAAFHTADFASAPSYFDDDDGDFLPLLLSEQMPALVQPGHGWTSALIVLAAIVAW |
Ga0132256_1013941052 | 3300015372 | Arabidopsis Rhizosphere | MLGSRTLLAVLVLLHVGLTSAAALQSVDFAWVPSYFDDDDGDFLPLLLSEQSPALLAPVRDWTPVLIALAAILTGRLVGRV |
Ga0132257_1032881641 | 3300015373 | Arabidopsis Rhizosphere | MLGSRTLLAVLVLLHVGLTSAAALQSVDFAWVPSYFDDDDGDFLPLLLSEQSPALLAPVRDWTPVLIALAAILTGRMVGRVRPAATPARFRAPPCR* |
Ga0187824_100161583 | 3300017927 | Freshwater Sediment | MLGARNVVAVLVLFHVGLVTAATFHTADFAWVPSYFDDDDGDFLPLLLSEQMPAVVDPGRGWAPALIVLAAIVAWRPPSRSRLAAARVRFRAPPCL |
Ga0187825_103319141 | 3300017930 | Freshwater Sediment | MLGARTLVAVLVLFHVGLVTAATFHTADFAWVPSYFDDDDGDFLPLLLAEQMPALVEPGRGWAPALIVLAAIVAWRPPSRSRLAAARVRFRAPPCL |
Ga0187821_103195031 | 3300017936 | Freshwater Sediment | MLGARTLVAVLVLFHVGLVTAATFHTADFAWVPSYFDDDDGDFLPLLLSEQMPAVVDPGRGWAPALIVLAAIVAWRPPS |
Ga0187822_100099772 | 3300017994 | Freshwater Sediment | MLGARTLVAVLVLFHVGLVTAATFHTADFAWVPSYFDDDDGDFLPLLLSEQMPAVVDPGRGWAPALIVLAAIVAWRPPSPSRLAAARVRFRAPPCL |
Ga0193722_10181183 | 3300019877 | Soil | MLGARTLVAVLVLFHVGLLTAATVQSVDFAWVPSYFDDDDGDFLPLLLSEQMSALVEPARGWMPALIGARGGPWWRPRPRPYLVAAPARFRAPPCP |
Ga0193723_10843601 | 3300019879 | Soil | RGPRGRRLGAMLGARTLVAVLVLFHVGLLTAAAVQSTDFAWVPSYFDDDDGDFLPLLLSEQMSALVEPARGWMPALIVLAAVLGWRPRPRPYLVAGPARLRAPPCP |
Ga0193707_10459623 | 3300019881 | Soil | MLGARTLVAVLVLFHVGLLTAAAVQSTDFAWAPSYFDDDDGDFLPLLLSEQMSALVEPARGWMPALIVLAAVLGWRPRPRPYLVAAPARLRAPPCP |
Ga0193729_10539573 | 3300019887 | Soil | MLGARTLVAVLVLFHVGLLTVAAVQSADFAWVPSYFDDDDGDFLPLLLSEQMSALVEPARGWMPALIVLAAVLGWRPRPRPYLVAGPARLRAPPCP |
Ga0193730_10118923 | 3300020002 | Soil | MLGARTLVAVLVLFHVGLLTVAAVQSADFAWVPSYFDDDDGDFLPLLLSEQMSALVEPARGWMPALVVLAAVLGWRPRPRPYLVAAPARFRAPPCP |
Ga0193726_10469953 | 3300020021 | Soil | MLGARTLVAVLVLFHVGLLTAATVQSVDFAWVPSYFDDDDGDFLPLLLSEQMSALVEPARGWMPALVVLAAVLGWRPRPRPYLVAAPARFRAPPCP |
Ga0193733_10219013 | 3300020022 | Soil | MLGARTLVAVLVLFHVGLLTVAAVQPADFAWAPSYFDDDDGDFLPLLLSEQMSALVEPARGWMPALIVLAAVLGWRPRPRPYLVAAPARLRAPPCP |
Ga0206356_118475362 | 3300020070 | Corn, Switchgrass And Miscanthus Rhizosphere | SFPQHRTGPDGSEPNLTPERRGRRLGAMLGSRTLLAVLVLLHVGLTSAAALQSVDFAWVPSYFDDDDGDFLPLLLSEQSPALLAPVRDWTPVLIALAAILTGRLVGRVRPAATPARFRAPPCR |
Ga0210407_100097091 | 3300020579 | Soil | MLGARTLVAVLVLFHVGLVAVAAIQSTDFAWVPSYFDDDDGDFLPLLLAEQMPALFEPGHGWTPALVVLAAVVGWRPRSRPYLAATPARFRAPPVPSLLAR |
Ga0210406_110394312 | 3300021168 | Soil | VGLVAVAAIQSTDFAWVPSYFDDDDGDFLPLLLAEQMPALFEPGHGWTPALVVLAAVVGWRPRSRPYLAATPARFRAPPVPSRLAR |
Ga0193695_10175243 | 3300021418 | Soil | MLGARTLVAVLVLFHVGLLTVAAGQSADFAWVPSYFDDDDGDFLPLLLSEQMSALVEPARGWMPALIVLAVVLGWRPRPRPYLVAVPARFRAPPCP |
Ga0224712_105913551 | 3300022467 | Corn, Switchgrass And Miscanthus Rhizosphere | RTLLAVLVLLHVGLTSAAALQSVDFAWVPSYFDDDDGDFLPLLLSEQSPALLAPVRDWTPVLIALAAILTGRLVGRVRPAATPARFRAPPCR |
Ga0242656_10151503 | 3300022525 | Soil | AVLVLFHVGLVAVAAIQSTDFAWVPSYFDDDDGDFLPLLLAEQMPALFEPGHGWTPALVVLAAVVGWRPRSRPYLAATPARFRAPPVPSRLAR |
Ga0242662_101094591 | 3300022533 | Soil | RTLVAVLVLFHVGLVAVAAIQSTDFAWVPSYFDDDDGDFLPLLLAEQMPALFEPGHGWTPALVVLAAVVGWRPRSRPYLAATPARFRAPPVPSLLAR |
Ga0242665_101554461 | 3300022724 | Soil | LVAVLVLFHVGLVAVAAIQSTDFAWVPSYFDDDDGDFLPLLLAEQMPALFEPGHGWTPALVVLAAVVGWRPRSRPYLAATPARFRAPPVPSLLAR |
Ga0242654_101381933 | 3300022726 | Soil | LVLFHVGLVAVAAIQSTDFAWVPSYFDDDDGDFLPLLLAEQMPALFEPGHGWTPALVVLAAVVGWRPRSRPYLAATPARFRAPPVPSLLAR |
Ga0207653_100697923 | 3300025885 | Corn, Switchgrass And Miscanthus Rhizosphere | MLGARTLVAVLVLFHVGLLTVAAVQSTDFAWVPSYFDDDDGDFLPLLLSEQMSALVEPARGWMPALIVLAVVLGWRPRPRPYLVATPARFRAPPCP |
Ga0207685_103728021 | 3300025905 | Corn, Switchgrass And Miscanthus Rhizosphere | MLGARTLVAVLVLFHVGLVTVAAIQSTDFAWVPSYFDDDDGDFLPLLLAEQMPALFEPGHGWTPALVVLAAVVGWRPRSRPYLAATPARFRAPPVPSLLAR |
Ga0207684_1000961210 | 3300025910 | Corn, Switchgrass And Miscanthus Rhizosphere | LVAVLVLFHVGLVTVAAIQSTDFAWVPSYFDDDDGDFLPLLLAEQMPALFEPGHGWTPALVVLAAVVGCRPRGRPYQAATPARFRAPPVSSLLPR |
Ga0207663_111794292 | 3300025916 | Corn, Switchgrass And Miscanthus Rhizosphere | MLGARTLVAVLVLFHVGLVTVAAIQSTDFAWVPSYFDDDDGDFLPLLLAEQMPALFEPGHGWTPALVVLAAVVGWRPR |
Ga0207646_101671113 | 3300025922 | Corn, Switchgrass And Miscanthus Rhizosphere | MLGARTLVAVLVLFHVGLVTVAAVQSTDFAWAPSYFDDDDGDFLPLLLSEQMSALIEPARGWMPALIVLAAVVGWRPLTRPYLVAAPARFRAPPCP |
Ga0207646_118036172 | 3300025922 | Corn, Switchgrass And Miscanthus Rhizosphere | RTGPDGSKPNLTRGARGRRLGAMLGARTLVAVLVLFHVGLLTVAAVQSTDFAWVPSYFDDDDGDFLPLLLSEQMSALVEPARGWMPALIVLAVVLGWRPRPRPYLVATPARFRAPPCP |
Ga0207659_105143033 | 3300025926 | Miscanthus Rhizosphere | GRRLGAMLGSRTLLAVLVLLHVGLTSAAALQSVDFAWVPSYFDDDDGDFLPLLLSEQSPALLAPVRDWTPVLIALAAILTGRLVGRVRPAATPARFRAPPCR |
Ga0207704_102946501 | 3300025938 | Miscanthus Rhizosphere | VLVLLHVGLTSAAALQSVDFAWVPSYFDDDDGDFLPLLLSEQSPALLAPVRDWTPVLIALAAILTGRLVGRVRPAATPARFRAPPCR |
Ga0207640_1000059924 | 3300025981 | Corn Rhizosphere | PNLTPERRGRRLGAMLGSRTLLAVLVLLHVGLTSAAALQSVDFAWVPSYFDDDDGDFLPLLLSEQSPALLAPVRDWTPVLIALAAILTGRLVGRVRPAATPARFRAPPCR |
Ga0208285_10026951 | 3300026005 | Rice Paddy Soil | MLGARILVTLLVLFHLGLATVATFHSADFAWVPSYFDDDDGDFLPLLLAEQMPALVDPGRGWTPALIVLAAIAGWRPPSR |
Ga0209438_10028093 | 3300026285 | Grasslands Soil | MLGARTLVAVLVLFHVGLLTVAAVQSADFAWVPSYFDDDDGDFLPLLLSEQMSALVEPARGWMPALIVLAVVLGWRPRPRPYLVAAPARFRAPPCP |
Ga0257163_10287163 | 3300026359 | Soil | MLGARTLVAVLVLFHVGLLTVAAVQSADFAWVPSYFDDDDGDFLPLLLSEQMSALVEPARGWMPALIVLAAVLGWRPRPRPYLVAAPARLRAPPCP |
Ga0257176_10015843 | 3300026361 | Soil | MLGARTLVAVLVLFHVGLVTVAAVQSADFAWAPSYFDDDDGDFLPLLLSEQMSALVEPARGWMPALIVLAVVLGWRPRPRPYLVAAPARFRAPPCP |
Ga0257161_10303053 | 3300026508 | Soil | VLFHVGLLTVAAVQSADFAWVPSYFDDDDGDFLPLLLSEQMSALVEPARGWMPALIVLAAVLGWRPRPRPYLVAAPARLRAPPCP |
Ga0257158_10380931 | 3300026515 | Soil | MLGARTLVAVLVLFHVGLLTAAAVQSADFAWVPSYFDDDDGDFLPLLLSEQMSALVEPARGWMPALIVLAAVLGWRPRPRPYLVAAPARLRAPPCP |
Ga0179587_101077913 | 3300026557 | Vadose Zone Soil | MLGARTLVAVLVLFHVGLLTAAAVQSADFAWVPSYFDDDDGDFLPLLLSEQMSALVEPARGWMPALIVLAVVLGWRPRPRPYLVAAPARFRAPPCP |
Ga0209329_10514221 | 3300027605 | Forest Soil | MLGARTLVAVLVLFHVGLLTVAAGQSADFAWVPSYFDDDDGDFLPLLLSEQMSALVEPARGWMPALIVLATVLGWRPRPRPYLVAAPARLRAPPCP |
Ga0209217_10451211 | 3300027651 | Forest Soil | MLGARTLVAVLVLFHVGLVTVAAIQSTDFAWVPSYFDDDDGDFLPLLLAEQMPALFEPGHGWMPALVVLAAVVGWRPP |
Ga0209328_102314331 | 3300027727 | Forest Soil | LTAAAVQSADFAWVPSYFDDDDGDFLPLLLSEQMSALVEPARGWMPALIVLAAVLGWRPRPRPYLVAAPARLRAPPCP |
Ga0209073_100430141 | 3300027765 | Agricultural Soil | MLGSRTILAVLVLLHVGLASAAVLQSVDFAWVPSYFDDDDGDFLPLLLSEQTPALLAPVRDWIPVLIALAAVLTGRLVGRVRPAATPARFRAP |
Ga0209073_102478882 | 3300027765 | Agricultural Soil | MLGARALVAVLVLFHVGLVTVAAIQSADFAWVPSYFDDDDGDFLPLLLAEQMPALFEPGHGWMPALVVLAAVVGWRPRSRPYLAATPARFRAPPVPSLLPR |
Ga0209073_103713232 | 3300027765 | Agricultural Soil | GSRTILAVLVLLHVGLASAAVLQSVDFAWVPSYFDDDDGDFLPLLLSEQTPALLAPVRDWIPVLIALAAVLTGRLVGRVRPAATPARFRAPPCR |
Ga0209177_100111583 | 3300027775 | Agricultural Soil | MLGSRTLLAVLVLLHVGLTSAAALQSVDFAWVPSYFDDDDGDFLPLLLSEQSPALLAPVRDWTPVLIALTAILTGRLVGRVRPAATPARFRAPPCR |
Ga0209177_102178071 | 3300027775 | Agricultural Soil | MLGSRTILAVLVLLHVGLASAAVLQSVDFAWVPSYFDDDDGDFLPLLLSEQTPALLAPVRDWIPVLIALAAVLTGRLVGRVRPA |
Ga0209701_103149402 | 3300027862 | Vadose Zone Soil | MLGARTLVAVLVLFHVGLLTVAAVQSADFAWVPSYFDDDDGDFLPLLLSEQMSALVEPARGWMPALIVLAAVVGWRPRARPYLVAASARFRAPPCP |
Ga0209488_101449531 | 3300027903 | Vadose Zone Soil | MLGARTLVAVLVLFHVGLVTVAAVQSADFAWAPSYFDDDDGDFLPLLLSEQMSALIEPARGWMPALIVLAAVVGWRPRTRPYLVAAPARFRAPPCP |
Ga0209526_100315544 | 3300028047 | Forest Soil | MLGARTLVAVLVLFHVGLLTAAAVQSADFAWVPSYFDDDDGDFLPLLLSEQMSALVEPARGWMPALIVLATVLGWRPRPRPYLVAAPARLRAPPCP |
Ga0247822_118196741 | 3300028592 | Soil | LTGPRSCPQHRTGPDGSEPNLTPERRGRRLGAMLGSRTLLAVLVLLHVGLTSAAALQSVDFAWVPSYFDDDDGDFLPLLLSEQSPALLAPVRDWTPVLIALAAILTGRLVGRVRPAATPARFRAPPCR |
Ga0307504_101610501 | 3300028792 | Soil | GSTPNLTRGPRGRRLGAMLGARTLVAVLVLFHVGLLTVAAVQSADFAWVPSYFDDDDGDFLPLLLSEQMSALVEPARGWMPALIVLAAVIGWRPRPRPYLVAVPARFRAPPCP |
Ga0307501_100320793 | 3300031152 | Soil | MLGARTLVAVLVLFHVGLLTAATVQSVDFAWVPSYFDDDDGDFLPLLLSEQMSALVEPARGWMPALIVLAAVLGWRPRPRPYLVAAPAR |
(restricted) Ga0255310_100363543 | 3300031197 | Sandy Soil | MLGARTLVAVLVLFHVGLVTAATFHTADFAWVPSYFDDDDGDFLPLLLSEQMPALVDPGGGWAPALIALAAIVAWRPPSPSRLAAARVRFRAPPCL |
(restricted) Ga0255312_11609121 | 3300031248 | Sandy Soil | MLGARTLVAVLVLFHVGLLTVAAVQSADFAWVPSYFDDDDGDFLPLLLAEQMPALVDPGRGWTPALIVLAAIVGWRPPSRLRLAAARVRFRAPPCP |
Ga0310887_107377792 | 3300031547 | Soil | EPNLTPERRGRRLGAMLGSRTLLAVLVLLHVGLTSAAALQSVDFAWVPSYFDDDDGDFLPLLLSEQSPALLAPVRDWTPVLIALAAILTGRLVGRVRPAATPARFRAPPCR |
Ga0307473_106687161 | 3300031820 | Hardwood Forest Soil | TPGPRGRRLGAMLGARTLVAVLVLFHVGLVTVGAIQSTDFAWVPSYFDDDDGDFPPLLLAEQMPALFEPGHGWTPALVVLAAVVGCRPRSRPYQAATPARFRAPPVSSLLPR |
Ga0310884_106137041 | 3300031944 | Soil | IGVPLTGPRSFPQHRTGPDGSEPNLTPERRGRRLGAMLGSRTLLAVLVLLHVGLTSAAALQSVDFAWVPSYFDDDDGDFLPLLLSEQSPALLAPVRDWTPVLIALAAILTGRLVGRVRPAATPARFRAPPCR |
Ga0307479_100202594 | 3300031962 | Hardwood Forest Soil | MLGARTLVAVLVLFHVGLVTVGAIQSTDFAWVPSYFDDDDGDFPPLLLAEQMPARFEPGHGWTPALVVLAAVVGWRPRSRPYQAATPARFRAPPVSSLLPR |
Ga0307470_101693302 | 3300032174 | Hardwood Forest Soil | MLGARTLVAVLVLFHVGLLTVAAVQPADFAWAPSYFDDDDGDFLPLLLSEQMSALVEPARGWMPALIVLAVVLGWRPRPRPYLVATPARFRAPPCP |
Ga0307471_1004851263 | 3300032180 | Hardwood Forest Soil | MLGARTLVAVLVLFHVGLVTVAAIQSTDFAWVPSYFDDDDGDFLPLLLAEQMPALFEPGHGWTPALVVLAAVVGWRPRSRPYQAATPARFRAPPVSSLLPR |
Ga0307472_1001484061 | 3300032205 | Hardwood Forest Soil | MLGARTLVAVLVLFHVGLVTVAAIQSTDFAWVPSYFDDDDGDFLPLLLAEQMPALFEPGHGWTPALVVLAAVVGWRPRSR |
Ga0335070_121237522 | 3300032829 | Soil | MLGGRARLVLLLVLFHVGLASAATLHVADFAWAPSYFDDDDGDFLPLLVSQQMPALVDPAAGWMPALMLLAAVAACRPRGHSRPAAASVR |
Ga0310810_1001339512 | 3300033412 | Soil | MLGARSLVALLLLFHVGLATAAAFHTADFAWVPSYFDDDDGDFLPLLLSEQMPALVQPGHGWTSALIVLAAIVAWRPPRRSRLAAARVRFRAPPCP |
Ga0326729_10123473 | 3300033432 | Peat Soil | MLGARILVAVLVLFHVGLATVATFHTADFAWVPSYFDDDDGDFLPLLLSEQMPALVDPGRGWTPALIVLAAIVARRPPSRPRLAAARVRFRAPP |
Ga0326726_101273724 | 3300033433 | Peat Soil | MLGARTLVAVLVLFHVGLATAATFHTADFAWVPSYFDDDDGDFLPLLLSEQIPALVDPGRGWTPALIVLATIVGWRPPSRPRLAAARVRFRAPPCP |
Ga0326726_102490603 | 3300033433 | Peat Soil | MLGARILVAVLVLFHVGLATVATFHTADFAWVPSYFDDDDGDFLPLLLSEQMSALVDPGRGWTPALIVLAAIVARRPPSRPRLAAARVRFRAPPCS |
Ga0316624_102181201 | 3300033486 | Soil | RRLGAMLGARTLVAVLVLFHVGLATVATFHTADFAWVPSYFDDDDGDFLPLLLSEQIPALVDPGRGWTPALIVLATILGWRPPSRSRFAAARVRFRAPPCP |
Ga0326730_10022064 | 3300033500 | Peat Soil | MLGARILVAVLVLFHVGLATVATFHTADFAWVPSYFDDDDGDFLPLLLSEQMPALVDPGRGWTPALIVLAAIVARRPPSRPRLAAARVRFRAPPCP |
Ga0316628_1004609722 | 3300033513 | Soil | MLGARILVTLLVLFHLGLATVVTFHTADFAWVPSYFDDDDGDFLPLLLAEQMPALVEPARGWTPALIVLAAIVAWRPPSRLRLAAARVRFRAPPCP |
Ga0316628_1009260743 | 3300033513 | Soil | MLGAHTLVAVLVLFHVGLATVATFHTADFAWVPSYFDDDDGDFLPLLLSEQIPALVDPGRGWTPALIVLATILGWRPPSRSRFAAARVRFRAPPCP |
Ga0373948_0096211_235_525 | 3300034817 | Rhizosphere Soil | MLGARILVTLLVLFHLGLATVATFHSADFAWVPSYFDDDDGDFLPLLLAEQMPALVDPGRGWTPALIVLAAIAGWRPPSRLRLAAARVRFRAPPCP |
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