NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F051729

Metagenome / Metatranscriptome Family F051729

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F051729
Family Type Metagenome / Metatranscriptome
Number of Sequences 143
Average Sequence Length 58 residues
Representative Sequence VDVAVPQQATVSGGMLSLRKSIKKRKLPMKHVRLKNLENEYLLGDCAMATAQPML
Number of Associated Samples 116
Number of Associated Scaffolds 143

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 6.99 %
% of genes near scaffold ends (potentially truncated) 31.47 %
% of genes from short scaffolds (< 2000 bps) 90.21 %
Associated GOLD sequencing projects 111
AlphaFold2 3D model prediction Yes
3D model pTM-score0.20

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (100.000 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine
(23.776 % of family members)
Environment Ontology (ENVO) Unclassified
(76.224 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Saline → Water (saline)
(80.420 % of family members)


 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      

 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 44.58%    β-sheet: 0.00%    Coil/Unstructured: 55.42%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.20
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 143 Family Scaffolds
PF04264YceI 27.27
PF13564DoxX_2 25.17
PF00126HTH_1 18.18
PF03466LysR_substrate 14.69
PF01292Ni_hydr_CYTB 5.59
PF02525Flavodoxin_2 2.10
PF01544CorA 0.70
PF01740STAS 0.70

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 143 Family Scaffolds
COG2353Polyisoprenoid-binding periplasmic protein YceIGeneral function prediction only [R] 27.27
COG1969Ni,Fe-hydrogenase I cytochrome b subunitEnergy production and conversion [C] 5.59
COG2864Cytochrome b subunit of formate dehydrogenaseEnergy production and conversion [C] 5.59
COG3038Cytochrome b561Energy production and conversion [C] 5.59
COG3658Cytochrome b subunit of Ni2+-dependent hydrogenaseEnergy production and conversion [C] 5.59
COG4117Thiosulfate reductase cytochrome b subunitInorganic ion transport and metabolism [P] 5.59
COG0598Mg2+ and Co2+ transporter CorAInorganic ion transport and metabolism [P] 0.70

 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms100.00 %
UnclassifiedrootN/A0.00 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2189573028|GS313G0146KB_1112118785596All Organisms → cellular organisms → Bacteria → Proteobacteria924Open in IMG/M
3300000930|BpDRAFT_10023084All Organisms → cellular organisms → Bacteria → Proteobacteria985Open in IMG/M
3300002688|Ga0005227J37284_1026535All Organisms → cellular organisms → Bacteria → Proteobacteria930Open in IMG/M
3300003580|JGI26260J51721_1042514All Organisms → cellular organisms → Bacteria → Proteobacteria743Open in IMG/M
3300003620|JGI26273J51734_10054834All Organisms → cellular organisms → Bacteria → Proteobacteria1243Open in IMG/M
3300003621|JGI26083J51738_10072241All Organisms → cellular organisms → Bacteria → Proteobacteria771Open in IMG/M
3300007229|Ga0075468_10033025All Organisms → cellular organisms → Bacteria → Proteobacteria1836Open in IMG/M
3300007231|Ga0075469_10079804All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria939Open in IMG/M
3300007554|Ga0102820_1061727All Organisms → cellular organisms → Bacteria → Proteobacteria904Open in IMG/M
3300007554|Ga0102820_1071015All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales838Open in IMG/M
3300007624|Ga0102878_1244890All Organisms → cellular organisms → Bacteria → Proteobacteria508Open in IMG/M
3300007632|Ga0102894_1170877All Organisms → cellular organisms → Bacteria → Proteobacteria577Open in IMG/M
3300007661|Ga0102866_1002727All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales3878Open in IMG/M
3300007715|Ga0102827_1102838All Organisms → cellular organisms → Bacteria → Proteobacteria647Open in IMG/M
3300007715|Ga0102827_1117293All Organisms → cellular organisms → Bacteria → Proteobacteria605Open in IMG/M
3300007981|Ga0102904_1064187All Organisms → cellular organisms → Bacteria → Proteobacteria843Open in IMG/M
3300008929|Ga0103732_1065272All Organisms → cellular organisms → Bacteria → Proteobacteria564Open in IMG/M
3300008932|Ga0103735_1053207All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → unclassified Rhodobacterales → Rhodobacterales bacterium601Open in IMG/M
3300009003|Ga0102813_1029994All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae1951Open in IMG/M
3300009054|Ga0102826_1098529All Organisms → cellular organisms → Bacteria → Proteobacteria697Open in IMG/M
3300009071|Ga0115566_10009838All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales7312Open in IMG/M
3300009071|Ga0115566_10280534All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales988Open in IMG/M
3300009077|Ga0115552_1002935All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae9643Open in IMG/M
3300009141|Ga0102884_1097365All Organisms → cellular organisms → Bacteria → Proteobacteria740Open in IMG/M
3300009142|Ga0102885_1008071All Organisms → cellular organisms → Bacteria → Proteobacteria2418Open in IMG/M
3300009172|Ga0114995_10073149All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1934Open in IMG/M
3300009172|Ga0114995_10348655All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales814Open in IMG/M
3300009172|Ga0114995_10575058All Organisms → cellular organisms → Bacteria → Proteobacteria616Open in IMG/M
3300009193|Ga0115551_1375069All Organisms → cellular organisms → Bacteria → Proteobacteria614Open in IMG/M
3300009409|Ga0114993_10527998All Organisms → cellular organisms → Bacteria → Proteobacteria875Open in IMG/M
3300009420|Ga0114994_10081350All Organisms → cellular organisms → Bacteria → Proteobacteria2211Open in IMG/M
3300009420|Ga0114994_10455597All Organisms → cellular organisms → Bacteria → Proteobacteria844Open in IMG/M
3300009420|Ga0114994_10807714All Organisms → cellular organisms → Bacteria → Proteobacteria609Open in IMG/M
3300009420|Ga0114994_10960138All Organisms → cellular organisms → Bacteria → Proteobacteria553Open in IMG/M
3300009420|Ga0114994_11092109All Organisms → cellular organisms → Bacteria → Proteobacteria515Open in IMG/M
3300009432|Ga0115005_10230609All Organisms → cellular organisms → Bacteria → Proteobacteria1448Open in IMG/M
3300009432|Ga0115005_11257943All Organisms → cellular organisms → Bacteria → Proteobacteria603Open in IMG/M
3300009433|Ga0115545_1143063All Organisms → cellular organisms → Bacteria → Proteobacteria839Open in IMG/M
3300009434|Ga0115562_1060357All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales1634Open in IMG/M
3300009434|Ga0115562_1087140All Organisms → cellular organisms → Bacteria → Proteobacteria1267Open in IMG/M
3300009436|Ga0115008_10752336All Organisms → cellular organisms → Bacteria → Proteobacteria711Open in IMG/M
3300009442|Ga0115563_1081563All Organisms → cellular organisms → Bacteria → Proteobacteria1429Open in IMG/M
3300009442|Ga0115563_1233072All Organisms → cellular organisms → Bacteria → Proteobacteria693Open in IMG/M
3300009442|Ga0115563_1327062All Organisms → cellular organisms → Bacteria → Proteobacteria555Open in IMG/M
3300009443|Ga0115557_1060677All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales1676Open in IMG/M
3300009467|Ga0115565_10301220All Organisms → cellular organisms → Bacteria → Proteobacteria729Open in IMG/M
3300009495|Ga0115571_1219848All Organisms → cellular organisms → Bacteria → Proteobacteria771Open in IMG/M
3300009498|Ga0115568_10014714All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales4633Open in IMG/M
3300009505|Ga0115564_10263861All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales873Open in IMG/M
3300009507|Ga0115572_10156543All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales1334Open in IMG/M
3300009526|Ga0115004_10258097All Organisms → cellular organisms → Bacteria → Proteobacteria1037Open in IMG/M
3300009599|Ga0115103_1624238All Organisms → cellular organisms → Bacteria → Proteobacteria1424Open in IMG/M
3300009785|Ga0115001_10059330All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae2515Open in IMG/M
3300009785|Ga0115001_10097522All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1926Open in IMG/M
3300009785|Ga0115001_10659776All Organisms → cellular organisms → Bacteria → Proteobacteria636Open in IMG/M
3300009786|Ga0114999_10333222All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales1211Open in IMG/M
3300012408|Ga0138265_1044439All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1268Open in IMG/M
3300012408|Ga0138265_1145256All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1609Open in IMG/M
3300012412|Ga0138266_1097863All Organisms → cellular organisms → Bacteria → Proteobacteria866Open in IMG/M
3300012412|Ga0138266_1126924All Organisms → cellular organisms → Bacteria → Proteobacteria800Open in IMG/M
3300012412|Ga0138266_1273665All Organisms → cellular organisms → Bacteria → Proteobacteria1303Open in IMG/M
3300012412|Ga0138266_1274419All Organisms → cellular organisms → Bacteria → Proteobacteria546Open in IMG/M
3300012414|Ga0138264_1328230All Organisms → cellular organisms → Bacteria → Proteobacteria822Open in IMG/M
3300012417|Ga0138262_1753315All Organisms → cellular organisms → Bacteria → Proteobacteria675Open in IMG/M
3300012418|Ga0138261_1666834All Organisms → cellular organisms → Bacteria → Proteobacteria566Open in IMG/M
3300012419|Ga0138260_10189474All Organisms → cellular organisms → Bacteria → Proteobacteria954Open in IMG/M
3300012419|Ga0138260_10202805All Organisms → cellular organisms → Bacteria → Proteobacteria746Open in IMG/M
3300012419|Ga0138260_10348492All Organisms → cellular organisms → Bacteria → Proteobacteria504Open in IMG/M
3300012419|Ga0138260_11104874All Organisms → cellular organisms → Bacteria → Proteobacteria513Open in IMG/M
3300012782|Ga0138268_1119724All Organisms → cellular organisms → Bacteria → Proteobacteria988Open in IMG/M
3300014973|Ga0134293_1022183All Organisms → cellular organisms → Bacteria → Proteobacteria797Open in IMG/M
3300018730|Ga0192967_1030014All Organisms → cellular organisms → Bacteria → Proteobacteria896Open in IMG/M
3300020166|Ga0206128_1098575All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1270Open in IMG/M
3300020166|Ga0206128_1131429All Organisms → cellular organisms → Bacteria → Proteobacteria1035Open in IMG/M
3300020175|Ga0206124_10035420All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales2294Open in IMG/M
3300020185|Ga0206131_10293445All Organisms → cellular organisms → Bacteria → Proteobacteria731Open in IMG/M
3300020187|Ga0206130_10078268All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria2085Open in IMG/M
3300020309|Ga0211681_1044284All Organisms → cellular organisms → Bacteria → Proteobacteria749Open in IMG/M
3300020382|Ga0211686_10042127All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae1843Open in IMG/M
3300020438|Ga0211576_10301253All Organisms → cellular organisms → Bacteria → Proteobacteria833Open in IMG/M
3300020469|Ga0211577_10339125All Organisms → cellular organisms → Bacteria → Proteobacteria942Open in IMG/M
3300021375|Ga0213869_10419036All Organisms → cellular organisms → Bacteria → Proteobacteria544Open in IMG/M
3300022866|Ga0222651_1021039All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae1570Open in IMG/M
(restricted) 3300022920|Ga0233426_10087507All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae1398Open in IMG/M
(restricted) 3300022931|Ga0233433_10256692All Organisms → cellular organisms → Bacteria → Proteobacteria736Open in IMG/M
3300023239|Ga0222660_1045266All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Roseobacter699Open in IMG/M
3300024191|Ga0228636_1033453All Organisms → cellular organisms → Bacteria → Proteobacteria1252Open in IMG/M
3300024242|Ga0228673_1063593All Organisms → cellular organisms → Bacteria → Proteobacteria653Open in IMG/M
3300024244|Ga0228678_1062400All Organisms → cellular organisms → Bacteria → Proteobacteria713Open in IMG/M
3300024293|Ga0228651_1109684All Organisms → cellular organisms → Bacteria → Proteobacteria621Open in IMG/M
3300024313|Ga0228624_1058413All Organisms → cellular organisms → Bacteria → Proteobacteria751Open in IMG/M
3300024348|Ga0244776_10326264All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Roseobacter1040Open in IMG/M
3300025577|Ga0209304_1035690All Organisms → cellular organisms → Bacteria → Proteobacteria1415Open in IMG/M
3300025620|Ga0209405_1063371All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae1193Open in IMG/M
3300025626|Ga0209716_1067013All Organisms → cellular organisms → Bacteria → Proteobacteria1116Open in IMG/M
3300025656|Ga0209054_1150084All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Roseobacter621Open in IMG/M
3300025658|Ga0209659_1056639All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1412Open in IMG/M
3300025699|Ga0209715_1186336All Organisms → cellular organisms → Bacteria → Proteobacteria663Open in IMG/M
3300025729|Ga0209558_1232019All Organisms → cellular organisms → Bacteria → Proteobacteria578Open in IMG/M
3300025767|Ga0209137_1142299All Organisms → cellular organisms → Bacteria → Proteobacteria885Open in IMG/M
3300025770|Ga0209362_1098559All Organisms → cellular organisms → Bacteria → Proteobacteria1099Open in IMG/M
3300025830|Ga0209832_1150610All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Roseobacter686Open in IMG/M
3300025849|Ga0209603_1171078All Organisms → cellular organisms → Bacteria → Proteobacteria860Open in IMG/M
3300025881|Ga0209309_10053892All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria2393Open in IMG/M
3300025890|Ga0209631_10068639All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria2178Open in IMG/M
3300025892|Ga0209630_10192313All Organisms → cellular organisms → Bacteria → Proteobacteria1000Open in IMG/M
3300026483|Ga0228620_1036351All Organisms → cellular organisms → Bacteria → Proteobacteria1168Open in IMG/M
3300026500|Ga0247592_1117737All Organisms → cellular organisms → Bacteria → Proteobacteria637Open in IMG/M
3300027232|Ga0208803_1072645All Organisms → cellular organisms → Bacteria → Proteobacteria615Open in IMG/M
3300027687|Ga0209710_1125985All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Roseobacter966Open in IMG/M
3300027752|Ga0209192_10033978All Organisms → cellular organisms → Bacteria → Proteobacteria2404Open in IMG/M
3300027788|Ga0209711_10039437All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria2694Open in IMG/M
3300027791|Ga0209830_10307736All Organisms → cellular organisms → Bacteria → Proteobacteria700Open in IMG/M
3300027810|Ga0209302_10236232All Organisms → cellular organisms → Bacteria → Proteobacteria864Open in IMG/M
3300028136|Ga0228608_1044018All Organisms → cellular organisms → Bacteria → Proteobacteria1303Open in IMG/M
3300028137|Ga0256412_1128914All Organisms → cellular organisms → Bacteria → Proteobacteria929Open in IMG/M
3300028194|Ga0257106_1052331All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales1538Open in IMG/M
3300028197|Ga0257110_1180174All Organisms → cellular organisms → Bacteria → Proteobacteria831Open in IMG/M
3300028672|Ga0257128_1064433All Organisms → cellular organisms → Bacteria → Proteobacteria756Open in IMG/M
3300030715|Ga0308127_1025830All Organisms → cellular organisms → Bacteria → Proteobacteria716Open in IMG/M
3300030722|Ga0308137_1045234All Organisms → cellular organisms → Bacteria → Proteobacteria786Open in IMG/M
3300030722|Ga0308137_1045314All Organisms → cellular organisms → Bacteria → Proteobacteria786Open in IMG/M
3300031519|Ga0307488_10546584All Organisms → cellular organisms → Bacteria → Proteobacteria682Open in IMG/M
3300031594|Ga0302131_1029276All Organisms → cellular organisms → Bacteria2207Open in IMG/M
3300031599|Ga0308007_10128352All Organisms → cellular organisms → Bacteria → Proteobacteria917Open in IMG/M
3300031612|Ga0308009_10118650All Organisms → cellular organisms → Bacteria → Proteobacteria1004Open in IMG/M
3300031612|Ga0308009_10373683All Organisms → cellular organisms → Bacteria → Proteobacteria521Open in IMG/M
3300031623|Ga0302123_10363140All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria680Open in IMG/M
3300031626|Ga0302121_10119921All Organisms → cellular organisms → Bacteria → Proteobacteria764Open in IMG/M
3300031637|Ga0302138_10109619All Organisms → cellular organisms → Bacteria → Proteobacteria986Open in IMG/M
3300031639|Ga0302117_10067470All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1653Open in IMG/M
3300031639|Ga0302117_10281638All Organisms → cellular organisms → Bacteria → Proteobacteria652Open in IMG/M
3300031655|Ga0308018_10194314All Organisms → cellular organisms → Bacteria → Proteobacteria689Open in IMG/M
3300031660|Ga0307994_1116104All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae935Open in IMG/M
3300031675|Ga0302122_10083657All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales1366Open in IMG/M
3300031683|Ga0308006_10227900All Organisms → cellular organisms → Bacteria → Proteobacteria580Open in IMG/M
3300031694|Ga0308015_10083566All Organisms → cellular organisms → Bacteria → Proteobacteria1317Open in IMG/M
3300031696|Ga0307995_1064417All Organisms → cellular organisms → Bacteria → Proteobacteria1495Open in IMG/M
3300031702|Ga0307998_1200013All Organisms → cellular organisms → Bacteria → Proteobacteria675Open in IMG/M
3300031703|Ga0308002_1084959All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Roseobacter688Open in IMG/M
3300031705|Ga0308003_1148696All Organisms → cellular organisms → Bacteria → Proteobacteria722Open in IMG/M
3300031706|Ga0307997_10087349All Organisms → cellular organisms → Bacteria → Proteobacteria1255Open in IMG/M
3300031706|Ga0307997_10280288All Organisms → cellular organisms → Bacteria → Proteobacteria594Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).


 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
MarineEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine23.78%
Pelagic MarineEnvironmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine16.08%
EstuarineEnvironmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine9.79%
Polar MarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Polar Marine9.79%
MarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Marine9.09%
SeawaterEnvironmental → Aquatic → Marine → Coastal → Unclassified → Seawater6.99%
MarineEnvironmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine4.90%
MarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Marine4.90%
SeawaterEnvironmental → Aquatic → Marine → Pelagic → Unclassified → Seawater3.50%
MarineEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine1.40%
SeawaterEnvironmental → Aquatic → Marine → Inlet → Unclassified → Seawater1.40%
AqueousEnvironmental → Aquatic → Marine → Coastal → Unclassified → Aqueous1.40%
Pelagic MarineEnvironmental → Aquatic → Marine → Neritic Zone → Unclassified → Pelagic Marine1.40%
Saline WaterEnvironmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Saline Water1.40%
Ice Edge, Mcmurdo Sound, AntarcticaEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Ice Edge, Mcmurdo Sound, Antarctica1.40%
Sackhole BrineEnvironmental → Aquatic → Marine → Coastal → Unclassified → Sackhole Brine0.70%
MarineEnvironmental → Aquatic → Marine → Coastal → Unclassified → Marine0.70%
Marine EstuarineEnvironmental → Aquatic → Marine → Intertidal Zone → Estuary → Marine Estuarine0.70%
Freshwater And MarineEnvironmental → Aquatic → Marine → Neritic Zone → Unclassified → Freshwater And Marine0.70%

Visualization
Powered by ApexCharts



Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
2189573028Estuarine microbial communities from Columbia River, sample from South Channel ETM site, CMGS313-FOS-0p8-ETM-15mEnvironmentalOpen in IMG/M
3300000930Marine microbial communities from the coastal margin of the Columbia River, USA - 33 PSU, 16mEnvironmentalOpen in IMG/M
3300002688Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - MetaT SI072_100m_A (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300003580Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - Saanich Inlet SI074_LV_120m_DNAEnvironmentalOpen in IMG/M
3300003620Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI037_S3LV_125m_DNAEnvironmentalOpen in IMG/M
3300003621Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - ESP_85LU_5_DNAEnvironmentalOpen in IMG/M
3300007229Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_30_<0.8_DNAEnvironmentalOpen in IMG/M
3300007231Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_30_>0.8_DNAEnvironmentalOpen in IMG/M
3300007554Estuarine microbial communities from the Columbia River estuary - Ebb tide non-ETM metaG S.709EnvironmentalOpen in IMG/M
3300007624Estuarine microbial communities from the Columbia River estuary - metaG 1548A-02EnvironmentalOpen in IMG/M
3300007632Estuarine microbial communities from the Columbia River estuary - metaG 1554A-3EnvironmentalOpen in IMG/M
3300007661Estuarine microbial communities from the Columbia River estuary - metaG 1546A-3EnvironmentalOpen in IMG/M
3300007715Estuarine microbial communities from the Columbia River estuary - metaG S.751EnvironmentalOpen in IMG/M
3300007981Estuarine microbial communities from the Columbia River estuary - metaG 1556A-3EnvironmentalOpen in IMG/M
3300008929Eukaryotic and microbial communities from ice edge, McMurdo Sound, Antarctica - 1AEnvironmentalOpen in IMG/M
3300008932Eukaryotic and microbial communities from ice edge, McMurdo Sound, Antarctica - 2AEnvironmentalOpen in IMG/M
3300009003Estuarine microbial communities from the Columbia River estuary - Flood tide ETM metaG S.725EnvironmentalOpen in IMG/M
3300009054Estuarine microbial communities from the Columbia River estuary - metaG S.737EnvironmentalOpen in IMG/M
3300009071Pelagic marine microbial communities from North Sea - COGITO_mtgs_120405EnvironmentalOpen in IMG/M
3300009077Pelagic marine microbial communities from North Sea - COGITO_mtgs_110328EnvironmentalOpen in IMG/M
3300009141Estuarine microbial communities from the Columbia River estuary - metaG 1550A-3EnvironmentalOpen in IMG/M
3300009142Estuarine microbial communities from the Columbia River estuary - metaG 1550B-3EnvironmentalOpen in IMG/M
3300009172Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_154EnvironmentalOpen in IMG/M
3300009193Pelagic marine microbial communities from North Sea - COGITO_mtgs_110321EnvironmentalOpen in IMG/M
3300009409Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_150EnvironmentalOpen in IMG/M
3300009420Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_152EnvironmentalOpen in IMG/M
3300009432Marine eukaryotic phytoplankton communities from Arctic Ocean - Arctic Ocean - Greenland ARC118M MetagenomeEnvironmentalOpen in IMG/M
3300009433Pelagic marine microbial communities from North Sea - COGITO_mtgs_100330EnvironmentalOpen in IMG/M
3300009434Pelagic marine microbial communities from North Sea - COGITO_mtgs_110516EnvironmentalOpen in IMG/M
3300009436Marine eukaryotic phytoplankton communities from Arctic Ocean - Fram Strait ARC3M MetagenomeEnvironmentalOpen in IMG/M
3300009442Pelagic marine microbial communities from North Sea - COGITO_mtgs_110519EnvironmentalOpen in IMG/M
3300009443Pelagic marine microbial communities from North Sea - COGITO_mtgs_110421EnvironmentalOpen in IMG/M
3300009467Pelagic marine microbial communities from North Sea - COGITO_mtgs_110530EnvironmentalOpen in IMG/M
3300009495Pelagic marine microbial communities from North Sea - COGITO_mtgs_120531EnvironmentalOpen in IMG/M
3300009498Pelagic marine microbial communities from North Sea - COGITO_mtgs_120426EnvironmentalOpen in IMG/M
3300009505Pelagic marine microbial communities from North Sea - COGITO_mtgs_110523EnvironmentalOpen in IMG/M
3300009507Pelagic marine microbial communities from North Sea - COGITO_mtgs_120607EnvironmentalOpen in IMG/M
3300009526Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB11_90EnvironmentalOpen in IMG/M
3300009599Marine eukaryotic communities from Pacific Ocean to study complex ecological interactions - MBTS_5May14_M1_3um Metatranscriptome (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300009785Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB8_130EnvironmentalOpen in IMG/M
3300009786Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB8_126EnvironmentalOpen in IMG/M
3300012408Metatranscriptomics of polar marine prokaryotic and eukaryotic communities from Palmer Station, Antarctica after 192hr light incubation - RNA23.A_192.20151118 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012412Metatranscriptomics of polar marine prokaryotic and eukaryotic communities from Palmer Station, Antarctica after 192hr light incubation - RNA24.B_192.20151118 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012414Metatranscriptomics of polar marine prokaryotic and eukaryotic communities from Arthur Harbor ice station, Antarctica - RNA16.ICE_1m.20151115 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012417Metatranscriptomics of polar marine prokaryotic and eukaryotic communities from Palmer Station, Antarctica after 72hr light incubation - RNA13.B_72.20151113 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012418Metatranscriptomics of polar marine prokaryotic and eukaryotic communities from Palmer Station, Antarctica after 72hr light incubation - RNA12.A_72.20151113 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012419Metatranscriptomics of polar marine prokaryotic and eukaryotic communities from Palmer Station, Antarctica after 24hr light incubation - RNA10.B_24.20151111 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012782Metatranscriptomics of polar marine prokaryotic and eukaryotic communities from Arthur Harbor ice station, Antarctica - RNA30.ICE_1m.20151125 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300014973Marine microbial communities to study oil droplet degradation from Trondheimsfjord, Norway - 0116 : 2 days incubationEnvironmentalOpen in IMG/M
3300018730Metatranscriptome of marine eukaryotic protist communities collected during Tara Oceans survey from station TARA_084 - TARA_N000001438 (ERX1782285-ERR1712028)EnvironmentalOpen in IMG/M
3300020166Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160426_1EnvironmentalOpen in IMG/M
3300020175Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160321_2EnvironmentalOpen in IMG/M
3300020185Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160517_1EnvironmentalOpen in IMG/M
3300020187Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160512_1EnvironmentalOpen in IMG/M
3300020309Marine microbial communities from Tara Oceans - TARA_B100000795 (ERX556064-ERR599104)EnvironmentalOpen in IMG/M
3300020382Marine microbial communities from Tara Oceans - TARA_B100000780 (ERX556058-ERR599059)EnvironmentalOpen in IMG/M
3300020438Marine microbial communities from Tara Oceans - TARA_B100001094 (ERX555907-ERR598942)EnvironmentalOpen in IMG/M
3300020469Marine microbial communities from Tara Oceans - TARA_B100001093 (ERX555967-ERR599052)EnvironmentalOpen in IMG/M
3300021375Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO132EnvironmentalOpen in IMG/M
3300022866Saline water microbial communities from Ace Lake, Antarctica - #369EnvironmentalOpen in IMG/M
3300022920 (restricted)Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_118_April2016_10_MGEnvironmentalOpen in IMG/M
3300022931 (restricted)Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_122_August2016_100_MGEnvironmentalOpen in IMG/M
3300023239Saline water microbial communities from Ace Lake, Antarctica - #549EnvironmentalOpen in IMG/M
3300024191Seawater microbial communities from Monterey Bay, California, United States - 45DEnvironmentalOpen in IMG/M
3300024242Seawater microbial communities from Monterey Bay, California, United States - 91DEnvironmentalOpen in IMG/M
3300024244Seawater microbial communities from Monterey Bay, California, United States - 125D_rEnvironmentalOpen in IMG/M
3300024293Seawater microbial communities from Monterey Bay, California, United States - 63DEnvironmentalOpen in IMG/M
3300024313Seawater microbial communities from Monterey Bay, California, United States - 29DEnvironmentalOpen in IMG/M
33000243480.2um to 3um size fraction coassemblyEnvironmentalOpen in IMG/M
3300025577Pelagic marine microbial communities from North Sea - COGITO_mtgs_100423 (SPAdes)EnvironmentalOpen in IMG/M
3300025620Pelagic marine microbial communities from North Sea - COGITO_mtgs_110516 (SPAdes)EnvironmentalOpen in IMG/M
3300025626Pelagic marine microbial communities from North Sea - COGITO_mtgs_120531 (SPAdes)EnvironmentalOpen in IMG/M
3300025656Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI075_LV_DNA_200m (SPAdes)EnvironmentalOpen in IMG/M
3300025658Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI072_LV_10m_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025699Pelagic marine microbial communities from North Sea - COGITO_mtgs_120503 (SPAdes)EnvironmentalOpen in IMG/M
3300025729Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI074_LV_150m_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025767Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - ESP_105LU_22_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025770Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI072_LV_165m_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025830Pelagic marine microbial communities from North Sea - COGITO_mtgs_110407 (SPAdes)EnvironmentalOpen in IMG/M
3300025849Pelagic marine microbial communities from North Sea - COGITO_mtgs_120607 (SPAdes)EnvironmentalOpen in IMG/M
3300025881Pelagic marine microbial communities from North Sea - COGITO_mtgs_120412 (SPAdes)EnvironmentalOpen in IMG/M
3300025890Pelagic Microbial community sample from North Sea - COGITO 998_met_08 (SPAdes)EnvironmentalOpen in IMG/M
3300025892Pelagic Microbial community sample from North Sea - COGITO 998_met_01 (SPAdes)EnvironmentalOpen in IMG/M
3300026483Seawater microbial communities from Monterey Bay, California, United States - 23DEnvironmentalOpen in IMG/M
3300026500Metatranscriptome of seawater microbial communities from Monterey Bay, California, United States - 54R (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300027232Estuarine microbial communities from the Columbia River estuary - metaG 1551A-02 (SPAdes)EnvironmentalOpen in IMG/M
3300027687Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_138 (SPAdes)EnvironmentalOpen in IMG/M
3300027752Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_154 (SPAdes)EnvironmentalOpen in IMG/M
3300027788Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB11_88 (SPAdes)EnvironmentalOpen in IMG/M
3300027791Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB8_130 (SPAdes)EnvironmentalOpen in IMG/M
3300027810Marine eukaryotic phytoplankton communities from Arctic Ocean - Arctic Ocean ARC135M Metagenome (SPAdes)EnvironmentalOpen in IMG/M
3300028136Seawater microbial communities from Monterey Bay, California, United States - 9DEnvironmentalOpen in IMG/M
3300028137Metatranscriptome of seawater microbial communities from Monterey Bay, California, United States - WCR_74 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300028194Marine microbial communities from Northeast Subartic Pacific Ocean, Canada - LP_J_2011_P26_10mEnvironmentalOpen in IMG/M
3300028197Marine microbial communities from Northeast Subartic Pacific Ocean, Canada - LP_J_2015_P26_10mEnvironmentalOpen in IMG/M
3300028672Metatranscriptome of marine microbial communities from Northeast Subartic Pacific Ocean, Canada - LP_J_2011_P26_10m (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300030715Metatranscriptome of marine microbial communities from Western Arctic Ocean, Canada - AG5_1295_SCM (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300030722Metatranscriptome of marine microbial communities from Western Arctic Ocean, Canada - CB4_943_SCM (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031519Sea-ice brine microbial communities from Beaufort Sea near Barrow, Alaska, United States - SB 0.2EnvironmentalOpen in IMG/M
3300031594Marine microbial communities from Western Arctic Ocean, Canada - CB9_20mEnvironmentalOpen in IMG/M
3300031599Marine microbial communities from water near the shore, Antarctic Ocean - #71EnvironmentalOpen in IMG/M
3300031612Marine microbial communities from water near the shore, Antarctic Ocean - #127EnvironmentalOpen in IMG/M
3300031623Marine microbial communities from Western Arctic Ocean, Canada - CB21_32.1EnvironmentalOpen in IMG/M
3300031626Marine microbial communities from Western Arctic Ocean, Canada - CB21_surfaceEnvironmentalOpen in IMG/M
3300031637Marine microbial communities from Western Arctic Ocean, Canada - CBN3_32.1EnvironmentalOpen in IMG/M
3300031639Marine microbial communities from Western Arctic Ocean, Canada - AG5_32.2EnvironmentalOpen in IMG/M
3300031655Marine microbial communities from water near the shore, Antarctic Ocean - #282EnvironmentalOpen in IMG/M
3300031660Marine microbial communities from Ellis Fjord, Antarctic Ocean - #261EnvironmentalOpen in IMG/M
3300031675Marine microbial communities from Western Arctic Ocean, Canada - CB21_SCMEnvironmentalOpen in IMG/M
3300031683Marine microbial communities from water near the shore, Antarctic Ocean - #69EnvironmentalOpen in IMG/M
3300031694Marine microbial communities from water near the shore, Antarctic Ocean - #231EnvironmentalOpen in IMG/M
3300031696Marine microbial communities from Ellis Fjord, Antarctic Ocean - #262EnvironmentalOpen in IMG/M
3300031702Marine microbial communities from David Island wharf, Antarctic Ocean - #37EnvironmentalOpen in IMG/M
3300031703Marine microbial communities from water near the shore, Antarctic Ocean - #34EnvironmentalOpen in IMG/M
3300031705Marine microbial communities from water near the shore, Antarctic Ocean - #36EnvironmentalOpen in IMG/M
3300031706Marine microbial communities from David Island wharf, Antarctic Ocean - #36EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap


 ⦗Top⦘

Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
GS313G0146KB_001496402189573028Marine EstuarineVDVAVPQQATVSGGMLSLMKSTKKRKLPMTHVRLKNLENEYLLGDCTMATAQPML
BpDRAFT_1002308443300000930Freshwater And MarineAALRQATASGGMLSLRKSIKKRKLPMKPVRLKNPENEYWLGNCAMATAQPMLRIGFPEIAKC*
Ga0005227J37284_102653513300002688MarineLQNVGVAVPQQATVSGGMLSLKKSIKKRKLPMKRVRLKNLENEYVLSNRATPTAQPMLLLGFPEIALC*
JGI26260J51721_104251413300003580MarineATVSGGMLSLKKSIKKKKLPMTHVRFKNLKNEYWLGDCAMATAQPMLRIGFPEIAKC*
JGI26273J51734_1005483423300003620MarineVDVAALRQATVSGGMLSLKKSIKKKKLPMTHVRFKNLKNEYWLGDCAMATAQPMLRIGFPEIAKC*
JGI26083J51738_1007224113300003621MarineVDVAALRQATVSGGMLSLKKSIKKKKLPMTHVRFKNLKNEYWLGDCAMATAHEYWLGDCAMATAQPMLRIGFPEIAKC*
Ga0075468_1003302543300007229AqueousVDVAVPQQANVSGGMLYLRKSIKKRKLPMKRVRLKNLENEQLLGDCVMAATQPML*
Ga0075469_1007980413300007231AqueousVDVAALRQANVSGGMLSLRKSIKKRKLPLKPVRLKNPENEYWLGDCAMATAQPMLRIGFPEIALC*
Ga0102820_106172723300007554EstuarineVDVAALRQATVSGGMLSLRKSIKKRKLPMKPVRLKNLETEYWLGDCAMATAQPMLRIGFPEIAKC*
Ga0102820_107101523300007554EstuarineVDVAAHRQATVSGGMLSLMKSIKKRKLPMKQVRLKNLENEYWLGGYALPTAQPML*
Ga0102878_124489013300007624EstuarineVDVAALRQATVSGGMLSLMKSIKKRKLPMKQVRLKNLENEYWLGGYALPTAQPML*
Ga0102894_117087713300007632EstuarineVDVAVPQQATVLGGMLSLRKSIKKRKLPMKPVRLKNPENEYWLGNCAMATAQPMLRIGFPEIAKC*
Ga0102866_100272723300007661EstuarineVDVAVPQQATVLGGMLSLRKSIKKRKLPMKQVRLKNLENEYWLGGYALPTAQPML*
Ga0102827_110283813300007715EstuarineVDVAALRQATVSGGMLSLRKSIKKRKLPMKPVSLKNPENEYWLGNCAMATAQPMLRIGFPEIAKC*
Ga0102827_111729323300007715EstuarineVDVAVPQQATVSGGMLSLMKSIKKRKLPMKQVRLKNLENEYWLGGYALPTAQPML*
Ga0102904_106418723300007981EstuarineVDVAALRQATVSGGMLSLRKSIKKRKLPMNPVRLKNPENEHWRDNCAMATAQTMLRIGFPEIALC*
Ga0103732_106527213300008929Ice Edge, Mcmurdo Sound, AntarcticaAAVLQQATASGGMLSLKKSIKKRKLPVKHVRLKNLENEYLLGDCAMATAQPML*
Ga0103735_105320723300008932Ice Edge, Mcmurdo Sound, AntarcticaVDVAVLQQATASGGMLSLKKSIKKRKLPVKHVRLKNLENEYFLGDCAMATAQPML*
Ga0102813_102999413300009003EstuarineVDVAALRQATVSGGMLSLKKSIKKKKLPMTHVRFKNLKNEYWLGDCAMATAQPMLRIGFPEIAVC*
Ga0102826_109852923300009054EstuarineVDVAAHRQATVSGGMLSLKKSIKKKKLPMTHVRFKNLKNEYWLGDCAMATAQPMLRIGFPEIAKC*
Ga0115566_1000983863300009071Pelagic MarineVDVAVPQQATVSGGMLSLKKSIKKRKLLMKHVRLKNLENEYLLGDCAMATAQQML*
Ga0115566_1028053423300009071Pelagic MarineVDVAVLRQATVSGGTLSLRKSIKKRKLPMKHVRLKNLENEYLLGDCAMATAQPML*
Ga0115552_100293543300009077Pelagic MarineVDVAVPQLATVSGGMLSLRKSIKKRKLHIKHTRLENLENEYLLGGCELPTAQPMLRLVSTCKS*
Ga0102884_109736513300009141EstuarineVDVAALRQATVSGGMLSLRKSIKKRKLPLKPVRLKNPENEYWLGDCAMATAQPMLRIGFPEIAKC*
Ga0102885_100807123300009142EstuarineVDVAALRQATVSGGMLSLKKRIKKKKLPMTHVRFKNLKNEYWLGDCAMATAQPMLRIGFPEIAKC*
Ga0114995_1007314913300009172MarineVDVAVLRQATVSGGTLSLRKIIKKRKLPMTYVRLKNLENEYLLGDCAMATAQPMP*
Ga0114995_1034865523300009172MarineVDVAAHRQATVSGGTLSLMKSIKKRKLPMKHVRLKNLENEYWLGDCAMATAQPML*
Ga0114995_1057505813300009172MarineVDVAVPQQATVLGGMLSLRKSIKKRKLSMKHVRLKNLEIEYLFCGNVMLAAAQMFSIGCLEIALC*
Ga0115551_137506913300009193Pelagic MarineVDVAVPQQATVSGGMLSLMKSIKKRKLPMKHVRLKNLENEYWLGGYALPTAQPML*
Ga0114993_1052799813300009409MarineVDVAALRQATVSGGMLSLKKSIKKRKLPMKHVRLKNLENEYWLGGCAMATAQPMLLLGFPEIALC*
Ga0114994_1008135033300009420MarineVGVAVPQQATVSGGMLSLKKSIKKRKLPMKRVRLKNLENEYVLSNRATPTAQPMLLLGFPEIALC*
Ga0114994_1045559723300009420MarineVDVAALRQATVSGGMLSLKKSIKKRKLPMKHVRLKNLENEYLLGDCAMATAQPMP*
Ga0114994_1080771423300009420MarineVDVAVPQQATVSGGMLSLKKSTKKRKLPMKHVRLKNLKTEYLLGGRVTPIAQQML*
Ga0114994_1096013823300009420MarineVDVAVPQQVTVLGGMLSLRKSIKKRKLSMKHVRLKNLEIEYLFCGNVMLAAAQMFSIGCL
Ga0114994_1109210923300009420MarineVDVAVPQQATVSGGMLSLMKSIKKRKLPMTHVRLKNLENEYLLGDCAMATAQPML*
Ga0115005_1023060923300009432MarineVDVAALRQATVSGGMLSLKKSIKKRKLPMKHVRLKNLENEYWLGGCAMATAQPMLRIGFPEIAKC*
Ga0115005_1125794313300009432MarineTVSGGMLSLMKSIKKRKLPMKQVRLKNLENEYWLGGYALPTAQPML*
Ga0115545_114306323300009433Pelagic MarineLRQATVSGGTLSLRKSIKKRKLPMKHVRLKNLENEYLLGDCAMATAQPML*
Ga0115562_106035723300009434Pelagic MarineVDVAVPQQATVSGGMLSLMKSTKKRKLPMTHVRLKNLENEYLLGDCAMATAQPML*
Ga0115562_108714033300009434Pelagic MarineVDVAVPQQATVSGGMLSLMKSIKKRKLPMKHVRLKNLENEYLLGGYALPTAQPML*
Ga0115008_1075233623300009436MarineDVAALRQATVSGGMLSLKKSIKKKKLPMTHVRFKNLKNEYWLGDCAMATAQPMLRIGFPEIAKC*
Ga0115563_108156333300009442Pelagic MarineVDVAVPQQATVSGGMLSLMKSIKKRKLPMKHVRLKNLENEYLLGGYALPTAQTML*
Ga0115563_123307223300009442Pelagic MarineVDVAALRQATASGGMLSLRKSIKKRKLPMNPVRLKNPENEHWRGNCAMATAQTMLRIGFPEIAK
Ga0115563_132706213300009442Pelagic MarineVGVAVPQQTTVSGGMLSLKKSIKKRKLPMKRVRLKNLENEYVLSNRATPTAQPMLLLGFPEIALC*
Ga0115557_106067723300009443Pelagic MarineVDVAVPQQATVSGGMLSLMKSTKKRKLRMTHVRLKNLENEYLLGDCAMATAQPML*
Ga0115565_1030122013300009467Pelagic MarineVGVAVPQQTTVSGGMLSLKKSIKKRKLPMKRVRLKNLENEYVLSNRATPTAQPMPLLGFPEIALC*
Ga0115571_121984823300009495Pelagic MarineDVAVLRQATVSGGTLSLRKSIKKRKLPLKPVRLKNPENEYWLGDCAMATAQPMLRIGFPEIALC*
Ga0115568_1001471493300009498Pelagic MarineQQTTVSGGMLSLKKSIKKRKLPMKPVRLNNPENEYWLGDCAMATAQPMLRIGFPEIAIC*
Ga0115564_1026386123300009505Pelagic MarineVDVAAHRQATVSGGMLSLMKSIKKRKLPMKQVRLKNLENEYWRGGYALPTAQPML*
Ga0115572_1015654323300009507Pelagic MarineVDVAALRQANVSGGMLSLRKSIKKRKLPMKHVRLKNLENEYLLGDCAMATAQPML*
Ga0115004_1025809733300009526MarineVAALRQATVSGGMLSLKKSIKKRKLPMKRVRLKNLENEYVLSNRATPTAQPMLLLGFPEIALC*
Ga0115103_162423813300009599MarineVLRQATVSGGTLSLRKSIKKRKLPMKHVRLKNLENEYLLGGYALPTAQPML*
Ga0115001_1005933033300009785MarineVDVAALRQATVSGGMLSLKKSIKKRKLPMKHVRLKNLENEYWLGDCAMATAQPML*
Ga0115001_1009752223300009785MarineVDVAVLRQATVSGGTLSLRKIIKKRKLPMKHVRLKNLENENWLGDCAMATAQ*
Ga0115001_1065977623300009785MarineVDVAVPQQVTVLGGMLSLRKSIKKRKLPMTHVRLKNLENEYLLGDCAMATAQP
Ga0114999_1033322223300009786MarineVDVAVPQQATVSGGTLSLMKSIKKRKLPMKQVRLKNLENEYLLGGYALPTAQPML*
Ga0138265_104443933300012408Polar MarineDVAVLQQATASGGMLSLKKSIKKRKLPVKHVRLKNLENEYLLSGHAMPTTRQML*
Ga0138265_114525623300012408Polar MarineVDVAALRQATVSDGMVSLKKSIKKRKLPMKHVRLKNLENEYWLGGCAMATAQPMLRIGFP
Ga0138266_109786313300012412Polar MarineVDVAVPQQATVSGGMLSLMKSTKKRKLPMTHVRLKNLENEYLLGNCAMATAQRML*
Ga0138266_112692413300012412Polar MarineQATVSGGMLSLRKSIKKRKLPMKHVRLKNLENEYWLGDCAMATAQPMLRIGFPKIAKC*
Ga0138266_127366523300012412Polar MarineVDVAALRQATVSGGMLSLRKSIKKRKLPMKPVRLKNPENEYWLGDCAMATAQPMLRIGFPEIALC*
Ga0138266_127441913300012412Polar MarineHQNVDVAVPQQATVSGGMLSLRKSIKKRKLPMTHVRLKNLETEYWLGDCALPTVQPML*
Ga0138264_132823013300012414Polar MarineLKHQNVDVAVPQQATVSGGMLSLRKIIKKRKLPMKHVRLKNLENEYLLGDCAMATAQPML
Ga0138262_175331523300012417Polar MarineVDVAALRQATVSGGMLSLKKSIKKRKLPMEHVRLKNLENEYWLGGCAMATA
Ga0138261_166683413300012418Polar MarineHQNVDVAVPQQATVSGGMLSLMKSTKKRKLPMTHVRLKNLENEYLLGNCAMATAQRML*
Ga0138260_1018947423300012419Polar MarineVDVAVPQQATVSGGMLSLRKIIKKRKLPMKHVRLKNLENEYLLGDRAMATAQPML*
Ga0138260_1020280513300012419Polar MarineQATVSGGMLSLRKSIKKRKLPMKPVRLKNPENEYWLGDCAMATAQPMLRIGFPEIALC*
Ga0138260_1034849223300012419Polar MarineVDVAALRQATVSGGMLSLRKSIKKRKLPMKPVRLKNPKNEYWLGDCAMATAQPML*
Ga0138260_1110487423300012419Polar MarineVDVAVPQQATVSGGMLSLMKSIKKRKLPMTHVRLKNLEIEYLLGDCTMATAQPML*
Ga0138268_111972413300012782Polar MarineQATVSGGMLSLRKSIKKRKLPMKPARLNNPENEYLLGDCAMATAQRML*
Ga0134293_102218313300014973MarineVDVAVPQQATVSGGMLSLRKSIKKRKLPMKHVRLKNLENEYLLGDCAMATAQPML*
Ga0192967_103001423300018730MarineVDVAVPQQATVLGGMLSLKKSIKKRKLPMKRVRLKNLENEYVLSHRATPTAQPMLRLGIPEVALC
Ga0206128_109857523300020166SeawaterVGVAVPQQTTVSGGMLSLKKSIKKRKLPMKRVRLKNLENEYVLSNRATPTAQPMLLLGFPEIALC
Ga0206128_113142923300020166SeawaterVDVAVPQQATVSGGMLSLMKSIKKRKLPMKHVRLKNLENEYLLGGYALPTAQPML
Ga0206124_1003542033300020175SeawaterVDVAVPQQATVSGGMLSLKKSIKKRKLLMKHVRLKNLENEYLLGDCAMATAQQML
Ga0206131_1029344513300020185SeawaterVDVAALRQATASGGMLSLRKSIKKRKLPMNPVRLKNPENEHWRGNCAMATAQTMLRIGFPEIAKC
Ga0206130_1007826823300020187SeawaterVDVAALRQATASGGMLSLRKSIKKRKLPMNPVRLKNPENEHWRDNCAMATAQTMLRIGFPEIAKC
Ga0211681_104428413300020309MarineVDVAVLQQATASGGMLSLKKSIKKRKLPVKHVRLKNLENEYLLGDCAMATAQPML
Ga0211686_1004212733300020382MarineVDVAVPQQATVLGGMLSLKKSIKERKLPMKRVRLKNLENEYVLSHRATPTAQPMLRLGIPEVALC
Ga0211576_1030125323300020438MarineVDVAVPQQATVSGGMLSLMKSTKKRKLPMTHVRLKNLENEYLLGDCAMATAQPML
Ga0211577_1033912513300020469MarineVDVAVPQQATVSGGMLSLMKSTKKRKLPMTHVRLKNLENEYLPGDCAMATAQPML
Ga0213869_1041903613300021375SeawaterVDVAVPQQAIVSGGMLSLMKSTKKRKLPMTHVRLKNLENEYLLGDCAMATAQPML
Ga0222651_102103913300022866Saline WaterVDVAVPQQATVSGGMLSLKKSIKKRKLLMKHVRLRNLENEYLLGDCAMATAQQML
(restricted) Ga0233426_1008750723300022920SeawaterVDVAAHRQATVSGGMLSLMKSIKKRKLPMKQVRLKNLENEYWLGGYALPTAQPML
(restricted) Ga0233433_1025669223300022931SeawaterVDVAALRQATVSGGMLSLRKSIKKRKLPMKPVRLKNPENEYWLGNCAMATAQPMLRIGFPEIAKC
Ga0222660_104526623300023239Saline WaterVDVAVLRQATVSGGTLSLRKSIKKRKLPMKHDRIKNLENEYWLGDCAMAAAQPML
Ga0228636_103345323300024191SeawaterVDVAVLRQATVSGGTLSLRKSIKKRKLPMKHVRLKNLENEYLLGGYALPTAQPML
Ga0228673_106359323300024242SeawaterVDVAVLRQATVSGGTLSLRKSIKKRKLPMKHVRLKNLENEYLLGDCTMATARPMLCLVST
Ga0228678_106240013300024244SeawaterVDVAVLRQATVSGGTLSLRKSIKKRKLPMKHVRLKNLENEYLLGDCTMATARPMLCLV
Ga0228651_110968423300024293SeawaterVDVAVLRQATVSGGTLSLRKSIKKRKLPMKHVRLKNLENEYLLGDCTMATAR
Ga0228624_105841313300024313SeawaterVDVAVLRQATVSGGTLSLRKSIKKRKLPMKHVRNKNLENEYLLGDCTM
Ga0244776_1032626423300024348EstuarineVDVAVPQQATVSGGMLSLMKSIKKRKLPMKQVRLKNLENEYWLGGYALPTAQPML
Ga0209304_103569013300025577Pelagic MarineVDVAVLRQATVSGGTLSLRKSIKKRKLPMKHVRLKNLENEYLLGDCTMATARPMLCL
Ga0209405_106337123300025620Pelagic MarineVDVAVPQQATVSGGMLSLRKSTKKRKLPMTHVRLKNLENEYLLGDCAMATAQPML
Ga0209716_106701323300025626Pelagic MarineVDVAVLRQATVSGGTLSLRKSIKKRKLPMKHVRLKNLENEYLLGDCAMATAQPML
Ga0209054_115008423300025656MarineVDVAVLRQATVSGGTLSLRKSIKKRKLPMKQVRLKNLENEYWLGGYALPTAQPML
Ga0209659_105663923300025658MarineVDVAVPQQATVSGGMLSLRKSIKKRKLPMKHVRLKNLENEYLLGDCALATAQPMLRIGFPKIALC
Ga0209715_118633613300025699Pelagic MarineVDVAALRQANVSGGMLSLRKSIKKRKLPLKPVRLKNPENEYWLGDCAMATAQPMLRIGFPEIALC
Ga0209558_123201913300025729MarineVDVAALRQATVSGGMLSLKKSIKKRKLPMKRVRLKNLENEYVLSNRATPTAQPMLLLGFPEIAKC
Ga0209137_114229923300025767MarineNHQNVDVVVPQQATVSGGMLSLKKSIKKRKLPMKHVRLKNLENEYLLGDCVMATAQLML
Ga0209362_109855913300025770MarineVDVAVPQQATVSGGMLSLMKSIKKRKLPMTHVRLKNLETEYWLGDCALPTAQPML
Ga0209832_115061023300025830Pelagic MarineVDVAVPQQATVSGGMLSLMKSTKKRKLRMTHVRLKNLENEYLLGDCAMATAQPML
Ga0209603_117107823300025849Pelagic MarineVDVAVPQQATVSGGMLSLMKSTKKRKLPMTHVRLKNLENEYFLGDCTMATAQPML
Ga0209309_1005389223300025881Pelagic MarineVDVAVPQLATVSGGMLSLRKSIKKRKLHIKHTRLENLENEYLLGGCELPTAQPMLRLVSTCKS
Ga0209631_1006863933300025890Pelagic MarineVDVAVPQLATVSGGMLSLRKSIKKRKLHIKHTRLENLENEYWLGGCELPTAQPMLRLVSTCKS
Ga0209630_1019231313300025892Pelagic MarineVDVAVLRQATVSGGTLSLRKSIKKRKLPMKHVRLKNLENEYLLGDCTMATA
Ga0228620_103635113300026483SeawaterVDVAVLQQATVSGGTLSLRKSIKKRKLPMKHVRLKNLENEYLLGDCTMATARPMLCLVST
Ga0247592_111773723300026500SeawaterVDVAVLRQATVSGGTLSLRKIIKKRKLHMKHVRLKNLENEYLLGDCAMATAQPML
Ga0208803_107264523300027232EstuarineVDVAALRQATVSGGMLSLKKSIKKKKLPMTHVRFKNLKNEYWLGDCAMATAQPMLRIGFPEIAKC
Ga0209710_112598523300027687MarineVDVAAHRQATVSGGTLSLMKSIKKRKLPMKHVRLKNLENEYWLGDCAMATAQPML
Ga0209192_1003397813300027752MarineVDVAVLRQATVSGGTLSLRKIIKKRKLPMTYVRLKNLENEYLLGDCAMATAQPMP
Ga0209711_1003943713300027788MarineVDVAVLRQATVSGGTLSLRKIIKKRKLPMKHVRLKNLENEYWLGDCAMATAQ
Ga0209830_1030773613300027791MarineVDVAALRQATVSGGMLSLKKSIKKRKLPMKHVRLKNLENEYWLGGCAMATAQPMLRIGFPEIAKC
Ga0209302_1023623213300027810MarineVGVAVPQQATVSGGMLSLKKSIKKRKLPMKRVRLKNLENEYVLSNRATPTAQPMLLLGFPEIALC
Ga0228608_104401823300028136SeawaterVDVAVLQQATVSGGTLSLRKSIKKRKLPMKHVRNKNLENEYLLGDCTIATTQP
Ga0256412_112891413300028137SeawaterHQNVDVAVPQQVTVSGGMGSLKKNTKKRKLPMKHVRLKNLKTEYLLGARVTPIAQQML
Ga0257106_105233123300028194MarineVDVAVLRRATVSGGMLSLRKSIKKRKLPMKHVRLKNLENEYLLGDCAMATAQPIL
Ga0257110_118017413300028197MarineVDVAVPQQATVSGGMLSLMKSTKKRKLRMTHVRLKNLENEYLLGDCAMVTAQPML
Ga0257128_106443323300028672MarineKHQNVDVAVPQQATVSGGMLSLMKSTKKRKLPMTHVRVKNLENEYLLGDCAMATAQPML
Ga0308127_102583013300030715MarineKWQKHQNVDVAVPQQATVSGGMLSLMKSTKKRKLPMTHVRLKNLENEYLLGDCAMATAQPML
Ga0308137_104523413300030722MarineVDVAVPQLATVSGGMLSLSKSIKKRKLHMKHARLKNLENEYLLGDCVMTTAQPML
Ga0308137_104531423300030722MarineLNHQNVDVAVPQQATVSGGMLSLKKSTKKRKLPMKHVRLKNLKTEYLLGGRVTPIAQQML
Ga0307488_1054658423300031519Sackhole BrineVDVAALRQATVSGGMLSLKKSIKKRKLPMKHVRLKNLENEYWLGGCAMATAQPMLRIGFPEIA
Ga0302131_102927633300031594MarineVDVAVLRQATVSGGTLSLRKIIKKRKLPMKHVRLKNLENEYWLGDCAMAT
Ga0308007_1012835223300031599MarineVDVAVPQQATVSGGMLSLMKSTKKRKLPMTHVRLKNLENEYLLGNCAMATAQRML
Ga0308009_1011865013300031612MarineVDVAVLQQATASGGMLSLKKSIKKRKLPVKHVRLKNLENEYFLGDCAMATAQQM
Ga0308009_1037368313300031612MarineVDVAVPQQATVSGGMLSLRKIIKKRKLPMKHVRLKNLENEYLLGDCAMATAQPML
Ga0302123_1036314013300031623MarineVDVAVPQLATVSGGMLSLRKSIKKRKLHMKHTRLENLENEYLLGGCELPTAQPMLRLVSACKS
Ga0302121_1011992123300031626MarineVDVAVLRQATVWGGMLSLRKIIKKRKLPMKQVRLKNLENEYLLGD
Ga0302138_1010961923300031637MarineVAVPQQATVSGGMLSLMKSIKKRKLPMKQVRLKNLENEYWLGGYALPTAQPML
Ga0302117_1006747023300031639MarineVDVAVPQLATVSGGMLSLRKSIKKRKLHIKHTRLENLENEYLLGGCELPTDQPMLRLVSTCKS
Ga0302117_1028163813300031639MarineVDVAVPQQATVSGGMLSLKKSTKKRKLPMKHVRLKNLKTEYLLGGRVTPIAQQML
Ga0308018_1019431423300031655MarineVDVAALRQATVSGGMLSLKKSIKKRKLPMEHVRLKNLENEYWLGGCAMATAQPMLRIGFPEIAKC
Ga0307994_111610423300031660MarineVDVAVPQQATVSGGMLSLTKSIKKRKLPMKQVRLKNLENEYWLGGYALPTAQPML
Ga0302122_1008365723300031675MarineVDVAVPQQATVSGGMLSLMKSIKKRKLPMTHVRLKNLENEYLLGDCAMATAQPML
Ga0308006_1022790023300031683MarineVDVAALRQATVSGGMLSLRKSIKKRKLPMKPVRLKNPENEYWLGDCAMATAQPMLRIGFPEIALC
Ga0308015_1008356613300031694MarineNVDVAALRKATVSGGMLSLRKSIKKRKLPMKPVRLKNPENEYWLGDCAMATAQPMLRIGFPEIALC
Ga0307995_106441733300031696MarineVDVAVPRQATVSGGMLSLRKSIKKRKLPMKHVRLKNLENEYWLGDCAMATAQPMLRIGFPKIAKC
Ga0307998_120001323300031702MarineVDVAALRQATVSGGMLSLRKSIKKRKLHMKPVRLNNPENEYLLGDCAMATAQRML
Ga0308002_108495923300031703MarineVDVAVLQQATASGGMLSLKKSIKKRKLPVKHVRLKNLENEYLLGDCAMATAQQML
Ga0308003_114869613300031705MarineVDVAALRQATVSGGMLSLKKSIKKRKLPMEHVRLKNLENEYWLGGCAMATAQPMLRIGFP
Ga0307997_1008734913300031706MarineLNHQNVDVAVLRQATVSGGMLSLRKSIKKRKLPMKHVRLKNLENEYLLGDCAMATAQPML
Ga0307997_1028028813300031706MarineVDVAVPQQATVLGGMLSLRKSIKKRKLPMKRVRLKNLENEYVLSHRATPTAQPMLRLGIPEVALC

 ⦗Top⦘


Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.