NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F051764

Metagenome / Metatranscriptome Family F051764

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F051764
Family Type Metagenome / Metatranscriptome
Number of Sequences 143
Average Sequence Length 42 residues
Representative Sequence SLGDVRAWTLVAAVAIGYMISRGLAKSGTKYVGGEDPLNRNN
Number of Associated Samples 102
Number of Associated Scaffolds 143

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 0.00 %
% of genes near scaffold ends (potentially truncated) 99.30 %
% of genes from short scaffolds (< 2000 bps) 90.21 %
Associated GOLD sequencing projects 100
AlphaFold2 3D model prediction Yes
3D model pTM-score0.40

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (90.210 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil
(48.951 % of family members)
Environment Ontology (ENVO) Unclassified
(49.650 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(44.056 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Transmembrane (alpha-helical) Signal Peptide: Yes Secondary Structure distribution: α-helix: 41.43%    β-sheet: 0.00%    Coil/Unstructured: 58.57%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.40
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 143 Family Scaffolds
PF03364Polyketide_cyc 37.76
PF07332Phage_holin_3_6 7.69
PF05974DUF892 6.99
PF07295DUF1451 5.59
PF12277DUF3618 5.59
PF13185GAF_2 0.70
PF07043DUF1328 0.70
PF02870Methyltransf_1N 0.70
PF00004AAA 0.70
PF01442Apolipoprotein 0.70
PF07498Rho_N 0.70
PF01471PG_binding_1 0.70
PF03641Lysine_decarbox 0.70
PF00903Glyoxalase 0.70
PF01844HNH 0.70

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 143 Family Scaffolds
COG3685Ferritin-like metal-binding protein YciEInorganic ion transport and metabolism [P] 6.99
COG0350DNA repair enzyme Ada (O6-methylguanine-DNA--protein-cysteine methyltransferase)Replication, recombination and repair [L] 0.70
COG1611Nucleotide monophosphate nucleosidase PpnN/YdgH, Lonely Guy (LOG) familyNucleotide transport and metabolism [F] 0.70
COG5487Uncharacterized membrane protein YtjA, UPF0391 familyFunction unknown [S] 0.70

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms92.31 %
UnclassifiedrootN/A7.69 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2228664021|ICCgaii200_c0859313Not Available505Open in IMG/M
2228664021|ICCgaii200_c1107514All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales3050Open in IMG/M
3300000033|ICChiseqgaiiDRAFT_c0587925All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium754Open in IMG/M
3300000044|ARSoilOldRDRAFT_c013700All Organisms → cellular organisms → Bacteria687Open in IMG/M
3300000363|ICChiseqgaiiFebDRAFT_13748770All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria739Open in IMG/M
3300000550|F24TB_10524005All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1990Open in IMG/M
3300000550|F24TB_10884875All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia516Open in IMG/M
3300000953|JGI11615J12901_10828708All Organisms → cellular organisms → Bacteria570Open in IMG/M
3300000956|JGI10216J12902_106654684All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria645Open in IMG/M
3300000956|JGI10216J12902_111989013All Organisms → cellular organisms → Bacteria759Open in IMG/M
3300004463|Ga0063356_101382291All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1035Open in IMG/M
3300004463|Ga0063356_105316766All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium553Open in IMG/M
3300004479|Ga0062595_102376608All Organisms → cellular organisms → Bacteria525Open in IMG/M
3300005340|Ga0070689_100542461All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1001Open in IMG/M
3300005364|Ga0070673_101074808All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia751Open in IMG/M
3300005438|Ga0070701_11058447All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia569Open in IMG/M
3300005543|Ga0070672_102050941All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia515Open in IMG/M
3300005577|Ga0068857_102217503All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria539Open in IMG/M
3300006853|Ga0075420_100409901All Organisms → cellular organisms → Bacteria1171Open in IMG/M
3300009148|Ga0105243_11557869All Organisms → cellular organisms → Bacteria → Terrabacteria group → Candidatus Dormibacteraeota → unclassified Candidatus Dormibacteraeota → Candidatus Dormibacteraeota bacterium686Open in IMG/M
3300009156|Ga0111538_11384304All Organisms → cellular organisms → Bacteria887Open in IMG/M
3300009840|Ga0126313_11459161Not Available568Open in IMG/M
3300010040|Ga0126308_10902055All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium616Open in IMG/M
3300010045|Ga0126311_11813559All Organisms → cellular organisms → Bacteria517Open in IMG/M
3300010112|Ga0127458_1125194All Organisms → cellular organisms → Bacteria640Open in IMG/M
3300010145|Ga0126321_1375237All Organisms → cellular organisms → Bacteria1175Open in IMG/M
3300010166|Ga0126306_10479244All Organisms → cellular organisms → Bacteria982Open in IMG/M
3300010371|Ga0134125_12372281All Organisms → cellular organisms → Bacteria577Open in IMG/M
3300010396|Ga0134126_12976669All Organisms → cellular organisms → Bacteria512Open in IMG/M
3300010397|Ga0134124_11507224All Organisms → cellular organisms → Bacteria701Open in IMG/M
3300010999|Ga0138505_100019546All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium859Open in IMG/M
3300011992|Ga0120146_1019546All Organisms → cellular organisms → Bacteria1284Open in IMG/M
3300012360|Ga0137375_10984031Not Available664Open in IMG/M
3300012395|Ga0134044_1284941All Organisms → cellular organisms → Bacteria1339Open in IMG/M
3300012500|Ga0157314_1005800All Organisms → cellular organisms → Bacteria948Open in IMG/M
3300012915|Ga0157302_10089751All Organisms → cellular organisms → Bacteria → Terrabacteria group → Candidatus Dormibacteraeota → unclassified Candidatus Dormibacteraeota → Candidatus Dormibacteraeota bacterium950Open in IMG/M
3300012955|Ga0164298_11182844All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium578Open in IMG/M
3300012977|Ga0134087_10296128All Organisms → cellular organisms → Bacteria757Open in IMG/M
3300013307|Ga0157372_11113941All Organisms → cellular organisms → Bacteria913Open in IMG/M
3300014488|Ga0182001_10330205All Organisms → cellular organisms → Bacteria631Open in IMG/M
3300015077|Ga0173483_10302843All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium783Open in IMG/M
3300015200|Ga0173480_10827882All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium594Open in IMG/M
3300017997|Ga0184610_1160817All Organisms → cellular organisms → Bacteria740Open in IMG/M
3300018027|Ga0184605_10119907All Organisms → cellular organisms → Bacteria1171Open in IMG/M
3300018028|Ga0184608_10159801All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium975Open in IMG/M
3300018031|Ga0184634_10197682All Organisms → cellular organisms → Bacteria915Open in IMG/M
3300018053|Ga0184626_10398712All Organisms → cellular organisms → Bacteria550Open in IMG/M
3300018054|Ga0184621_10087965All Organisms → cellular organisms → Bacteria1087Open in IMG/M
3300018074|Ga0184640_10164159All Organisms → cellular organisms → Bacteria995Open in IMG/M
3300018075|Ga0184632_10075792All Organisms → cellular organisms → Bacteria1467Open in IMG/M
3300018075|Ga0184632_10264726All Organisms → cellular organisms → Bacteria749Open in IMG/M
3300018076|Ga0184609_10256222All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium818Open in IMG/M
3300018081|Ga0184625_10560937Not Available566Open in IMG/M
3300018082|Ga0184639_10629323All Organisms → cellular organisms → Bacteria522Open in IMG/M
3300018469|Ga0190270_13153886All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium522Open in IMG/M
3300019255|Ga0184643_1420600All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium708Open in IMG/M
3300019269|Ga0184644_1401714All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium520Open in IMG/M
3300019867|Ga0193704_1000667All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium6405Open in IMG/M
3300019867|Ga0193704_1071767All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium648Open in IMG/M
3300019869|Ga0193705_1008358All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales2255Open in IMG/M
3300019869|Ga0193705_1025224All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1287Open in IMG/M
3300019869|Ga0193705_1030630All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1156Open in IMG/M
3300019885|Ga0193747_1056996All Organisms → cellular organisms → Bacteria → Proteobacteria969Open in IMG/M
3300020070|Ga0206356_11749941All Organisms → cellular organisms → Bacteria621Open in IMG/M
3300020077|Ga0206351_10173249All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium659Open in IMG/M
3300020080|Ga0206350_10254183All Organisms → cellular organisms → Bacteria1174Open in IMG/M
3300020082|Ga0206353_11923474All Organisms → cellular organisms → Bacteria500Open in IMG/M
3300022195|Ga0222625_1053463All Organisms → cellular organisms → Bacteria765Open in IMG/M
3300022534|Ga0224452_1047628All Organisms → cellular organisms → Bacteria1269Open in IMG/M
3300022694|Ga0222623_10116323All Organisms → cellular organisms → Bacteria1041Open in IMG/M
3300022756|Ga0222622_10003828All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia6582Open in IMG/M
3300022756|Ga0222622_10229818All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1246Open in IMG/M
3300022756|Ga0222622_10308870All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1090Open in IMG/M
3300022893|Ga0247787_1037171All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium695Open in IMG/M
3300025920|Ga0207649_10688667All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium792Open in IMG/M
3300025921|Ga0207652_11506568All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium577Open in IMG/M
3300025926|Ga0207659_11763312Not Available526Open in IMG/M
3300025937|Ga0207669_10097566All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1933Open in IMG/M
3300025942|Ga0207689_10543621Not Available975Open in IMG/M
3300028608|Ga0247819_11050390Not Available518Open in IMG/M
3300028710|Ga0307322_10015803All Organisms → cellular organisms → Bacteria1704Open in IMG/M
3300028710|Ga0307322_10031877All Organisms → cellular organisms → Bacteria1249Open in IMG/M
3300028710|Ga0307322_10089647All Organisms → cellular organisms → Bacteria783Open in IMG/M
3300028711|Ga0307293_10119094All Organisms → cellular organisms → Bacteria839Open in IMG/M
3300028711|Ga0307293_10168130All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium698Open in IMG/M
3300028712|Ga0307285_10009323All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales2080Open in IMG/M
3300028715|Ga0307313_10037971All Organisms → Viruses → Predicted Viral1382Open in IMG/M
3300028715|Ga0307313_10044536All Organisms → cellular organisms → Bacteria1289Open in IMG/M
3300028716|Ga0307311_10269054All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium509Open in IMG/M
3300028718|Ga0307307_10022037All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter1767Open in IMG/M
3300028718|Ga0307307_10062270All Organisms → cellular organisms → Bacteria1104Open in IMG/M
3300028720|Ga0307317_10011341All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales2660Open in IMG/M
3300028720|Ga0307317_10020895All Organisms → cellular organisms → Bacteria2001Open in IMG/M
3300028721|Ga0307315_10268401All Organisms → cellular organisms → Bacteria538Open in IMG/M
3300028722|Ga0307319_10031867All Organisms → cellular organisms → Bacteria1635Open in IMG/M
3300028744|Ga0307318_10058380All Organisms → Viruses → Predicted Viral1282Open in IMG/M
3300028755|Ga0307316_10004019All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria4545Open in IMG/M
3300028771|Ga0307320_10147327All Organisms → cellular organisms → Bacteria909Open in IMG/M
3300028771|Ga0307320_10268835All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium674Open in IMG/M
3300028784|Ga0307282_10098865All Organisms → cellular organisms → Bacteria1352Open in IMG/M
3300028784|Ga0307282_10106775All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1304Open in IMG/M
3300028787|Ga0307323_10004744All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales4413Open in IMG/M
3300028793|Ga0307299_10267295All Organisms → cellular organisms → Bacteria642Open in IMG/M
3300028810|Ga0307294_10010847All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales2260Open in IMG/M
3300028810|Ga0307294_10076476All Organisms → cellular organisms → Bacteria1022Open in IMG/M
3300028814|Ga0307302_10120076All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1262Open in IMG/M
3300028814|Ga0307302_10147538All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1138Open in IMG/M
3300028824|Ga0307310_10091922All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1337Open in IMG/M
3300028824|Ga0307310_10229904All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium884Open in IMG/M
3300028828|Ga0307312_10002668All Organisms → cellular organisms → Bacteria9360Open in IMG/M
3300028828|Ga0307312_10017692All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales4028Open in IMG/M
3300028828|Ga0307312_10249794All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter1147Open in IMG/M
3300028828|Ga0307312_10779646Not Available633Open in IMG/M
3300028880|Ga0307300_10235242All Organisms → cellular organisms → Bacteria603Open in IMG/M
3300028881|Ga0307277_10106085All Organisms → cellular organisms → Bacteria1195Open in IMG/M
3300030830|Ga0308205_1002858All Organisms → Viruses → Predicted Viral1426Open in IMG/M
3300030830|Ga0308205_1026907All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium688Open in IMG/M
3300030830|Ga0308205_1052992All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium544Open in IMG/M
3300030902|Ga0308202_1006042All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter1526Open in IMG/M
3300030902|Ga0308202_1089209All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium623Open in IMG/M
3300030903|Ga0308206_1002680All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter2016Open in IMG/M
3300030903|Ga0308206_1017335All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1172Open in IMG/M
3300030903|Ga0308206_1031468All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium966Open in IMG/M
3300030903|Ga0308206_1057113All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium790Open in IMG/M
3300030903|Ga0308206_1098809All Organisms → cellular organisms → Bacteria651Open in IMG/M
3300030903|Ga0308206_1139172Not Available576Open in IMG/M
3300030903|Ga0308206_1185199All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium520Open in IMG/M
3300030905|Ga0308200_1159638All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium527Open in IMG/M
3300030988|Ga0308183_1177044All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium542Open in IMG/M
3300031058|Ga0308189_10486123All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium529Open in IMG/M
3300031089|Ga0102748_11704141Not Available586Open in IMG/M
3300031091|Ga0308201_10071284All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium932Open in IMG/M
3300031091|Ga0308201_10175485All Organisms → cellular organisms → Bacteria691Open in IMG/M
3300031091|Ga0308201_10229819All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium628Open in IMG/M
3300031092|Ga0308204_10006124All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales1953Open in IMG/M
3300031092|Ga0308204_10056327All Organisms → cellular organisms → Bacteria973Open in IMG/M
3300031092|Ga0308204_10063339All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium934Open in IMG/M
3300031092|Ga0308204_10170348All Organisms → cellular organisms → Bacteria660Open in IMG/M
3300031092|Ga0308204_10351440All Organisms → cellular organisms → Bacteria507Open in IMG/M
3300031852|Ga0307410_10826768All Organisms → cellular organisms → Bacteria789Open in IMG/M
3300033550|Ga0247829_11034748All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium682Open in IMG/M
3300033550|Ga0247829_11301278All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium602Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil48.95%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment8.39%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil4.90%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment3.50%
Serpentine SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil2.80%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere2.80%
Groundwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment2.10%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil2.10%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil2.10%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil2.10%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere2.10%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil1.40%
Arabidopsis Thaliana RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere1.40%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere1.40%
SoilEnvironmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil0.70%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil0.70%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil0.70%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil0.70%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil0.70%
PermafrostEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost0.70%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil0.70%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere0.70%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere0.70%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere0.70%
SoilEnvironmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil0.70%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere0.70%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere0.70%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere0.70%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere0.70%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.70%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere0.70%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere0.70%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere0.70%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere0.70%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2228664021Soil microbial communities from Great Prairies - Iowa, Continuous Corn soilEnvironmentalOpen in IMG/M
3300000033Soil microbial communities from Great Prairies - Iowa, Continuous Corn soilEnvironmentalOpen in IMG/M
3300000044Arabidopsis rhizosphere microbial communities from the University of North Carolina - sample from Arabidopsis soil oldHost-AssociatedOpen in IMG/M
3300000363Soil microbial communities from Great Prairies - Iowa, Continuous Corn soilEnvironmentalOpen in IMG/M
3300000550Amended soil microbial communities from Kansas Great Prairies, USA - BrdU amended with acetate total DNA F2.4 TB clc assemlyEnvironmentalOpen in IMG/M
3300000953Soil microbial communities from Great Prairies - Kansas Corn soilEnvironmentalOpen in IMG/M
3300000956Soil microbial communities from Great Prairies - Kansas, Native Prairie soilEnvironmentalOpen in IMG/M
3300004463Combined assembly of Arabidopsis thaliana microbial communitiesHost-AssociatedOpen in IMG/M
3300004479Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAsEnvironmentalOpen in IMG/M
3300005340Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaGEnvironmentalOpen in IMG/M
3300005364Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaGHost-AssociatedOpen in IMG/M
3300005438Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaGEnvironmentalOpen in IMG/M
3300005543Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaGHost-AssociatedOpen in IMG/M
3300005577Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2Host-AssociatedOpen in IMG/M
3300006853Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4Host-AssociatedOpen in IMG/M
3300009148Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaGHost-AssociatedOpen in IMG/M
3300009156Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009840Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105AEnvironmentalOpen in IMG/M
3300010040Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55EnvironmentalOpen in IMG/M
3300010045Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61EnvironmentalOpen in IMG/M
3300010112Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_5_4_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010145Soil microbial communities from Hawaii, USA to study soil gas exchange rates - KP-HI-INT metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010166Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27EnvironmentalOpen in IMG/M
3300010371Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1EnvironmentalOpen in IMG/M
3300010396Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2EnvironmentalOpen in IMG/M
3300010397Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4EnvironmentalOpen in IMG/M
3300010999Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t3i015EnvironmentalOpen in IMG/M
3300011992Permafrost microbial communities from Nunavut, Canada - A23_65cm_12MEnvironmentalOpen in IMG/M
3300012360Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaGEnvironmentalOpen in IMG/M
3300012395Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_8_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012500Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.4.old.080610Host-AssociatedOpen in IMG/M
3300012915Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S103-311B-2EnvironmentalOpen in IMG/M
3300012955Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MGEnvironmentalOpen in IMG/M
3300012977Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300013307Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaGHost-AssociatedOpen in IMG/M
3300014488Bulk soil microbial communities from Mexico - San Felipe (SF) metaGEnvironmentalOpen in IMG/M
3300015077Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2 (version 2)EnvironmentalOpen in IMG/M
3300015200Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1 (version 2)EnvironmentalOpen in IMG/M
3300017997Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_coexEnvironmentalOpen in IMG/M
3300018027Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coexEnvironmentalOpen in IMG/M
3300018028Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coexEnvironmentalOpen in IMG/M
3300018031Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b1EnvironmentalOpen in IMG/M
3300018053Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_b1EnvironmentalOpen in IMG/M
3300018054Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1EnvironmentalOpen in IMG/M
3300018074Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b2EnvironmentalOpen in IMG/M
3300018075Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b1EnvironmentalOpen in IMG/M
3300018076Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coexEnvironmentalOpen in IMG/M
3300018081Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1EnvironmentalOpen in IMG/M
3300018082Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b2EnvironmentalOpen in IMG/M
3300018469Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 TEnvironmentalOpen in IMG/M
3300019255Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019269Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019867Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3m1EnvironmentalOpen in IMG/M
3300019869Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3m2EnvironmentalOpen in IMG/M
3300019885Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1m2EnvironmentalOpen in IMG/M
3300020070Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300020077Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-1 (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300020080Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-4 (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300020082Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022195Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300022534Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_b1EnvironmentalOpen in IMG/M
3300022694Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_coexEnvironmentalOpen in IMG/M
3300022756Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1EnvironmentalOpen in IMG/M
3300022893Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S126-311R-4EnvironmentalOpen in IMG/M
3300025920Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025921Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025926Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025937Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025942Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300028608Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Xylose_Day6EnvironmentalOpen in IMG/M
3300028710Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_380EnvironmentalOpen in IMG/M
3300028711Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_150EnvironmentalOpen in IMG/M
3300028712Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_139EnvironmentalOpen in IMG/M
3300028715Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_203EnvironmentalOpen in IMG/M
3300028716Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_198EnvironmentalOpen in IMG/M
3300028718Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_194EnvironmentalOpen in IMG/M
3300028720Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_357EnvironmentalOpen in IMG/M
3300028721Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_355EnvironmentalOpen in IMG/M
3300028722Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_368EnvironmentalOpen in IMG/M
3300028744Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_367EnvironmentalOpen in IMG/M
3300028755Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_356EnvironmentalOpen in IMG/M
3300028771Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_369EnvironmentalOpen in IMG/M
3300028784Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121EnvironmentalOpen in IMG/M
3300028787Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_381EnvironmentalOpen in IMG/M
3300028793Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_159EnvironmentalOpen in IMG/M
3300028810Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_151EnvironmentalOpen in IMG/M
3300028814Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183EnvironmentalOpen in IMG/M
3300028824Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197EnvironmentalOpen in IMG/M
3300028828Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202EnvironmentalOpen in IMG/M
3300028880Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_181EnvironmentalOpen in IMG/M
3300028881Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_116EnvironmentalOpen in IMG/M
3300030830Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_368 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300030902Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_356 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300030903Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_369 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300030905Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_204 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300030988Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_157 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031058Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_184 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031089Forest soil microbial communities from USA, for metatranscriptomics studies - Jemez Pines PI 2B (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300031091Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_355 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031092Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_367 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031852Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3Host-AssociatedOpen in IMG/M
3300033550Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day4EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
ICCgaii200_085931322228664021SoilLGDVRAWTLVTAVAAAYIISRGLAKSGSRYSGGEDPLNRSNR
ICCgaii200_110751472228664021SoilDVRAWTLVAAVATGYIISRGLAKSGTKYTGGEDPVNRDS
ICChiseqgaiiDRAFT_058792523300000033SoilNDVRAWTLVAAVATGYIISRGLAKSGTKYTGGEDPVNRDS*
ARSoilOldRDRAFT_01370013300000044Arabidopsis RhizosphereTLVAAVAIGYMLSRGLAKSGTKYVGDEDPLNRNDH*
ICChiseqgaiiFebDRAFT_1374877023300000363SoilAAISDTLGDVRAWTLVSAVVVGYMLSRGLAKSGSRYLGGEDPVGRDDR*
F24TB_1052400513300000550SoilRAWTLVAAVAIGYMISRGLAKSGTKYAGGEDSLNQNNR*
F24TB_1088487523300000550SoilSLGDVRAWTLVTAVVVGYMISRGLAKSGSRYFGGDDPLRRDDR*
JGI11615J12901_1082870823300000953SoilSDSLNDVRAWTLVAAVATGYIISRGLAKSGTKYTGGEDPVNRDS*
JGI10216J12902_10665468423300000956SoilVSDSLDDVRAWTLVAAVSIGYIVSRGLAKSGSRYVGSEDPTNRDDR*
JGI10216J12902_11198901323300000956SoilWTLVAVVAVGYMISRGLAKSGTKHVGGEDTLTRNN*
Ga0063356_10138229113300004463Arabidopsis Thaliana RhizosphereSLGDVRAWTLVAAVAIGYMISRGLAKSGTKYVGGEDPLNRNN*
Ga0063356_10531676613300004463Arabidopsis Thaliana RhizosphereSLGDVRAWTLVAAVAIGYMISRGLAKAGTKYVGGEDPLNRNN*
Ga0062595_10237660813300004479SoilVRAWTLVAAVAIGYMVSRGLAKSGTKYAGSEDPLNRDNR*
Ga0070689_10054246113300005340Switchgrass RhizosphereTWVSDTLNDVRGWTLVAAVAIGYMLSRGLAKSGSRYLGGEDALNR*
Ga0070673_10107480823300005364Switchgrass RhizosphereATWVSDTLNDVRGWTLVAAVAIGYMLSRGLAKSGSRYLGGEDALNR*
Ga0070701_1105844723300005438Corn, Switchgrass And Miscanthus RhizosphereSDSLGDVRAWTLVTIVAAAYIISRGLAKAGSRYSGGEDPLNR*
Ga0070672_10205094113300005543Miscanthus RhizosphereIAAAVSDSLGDVRAWTLVTIVAAAYIISRGLAKAGSRYSGGEDPLNR*
Ga0068857_10221750313300005577Corn RhizosphereAWTLVAAVAAAYIISRGLAKSGSRYSGGEDPLNRNDR*
Ga0075420_10040990113300006853Populus RhizosphereWTLVAAVSIGYIISRGLAKSGSEYFGDEDPLNRDDR*
Ga0105243_1155786913300009148Miscanthus RhizosphereTLVAAIGIGYMISRGLAKAGTKYAGGEDPLNNNR*
Ga0111538_1138430413300009156Populus RhizosphereRAWTLVTAVVVGYMISRGLAKAGSRHFGGDDPLRRDPR*
Ga0126313_1145916123300009840Serpentine SoilDSLNDVRAWTLVAAVAIGYMISRGLAKSGTKYAGSEDPLNRDNR*
Ga0126308_1090205513300010040Serpentine SoilDSLNDVRAWTLVAAVAIGYMLSRGLAKSGSKYVGGEDPLNRNDR*
Ga0126311_1181355913300010045Serpentine SoilIASAVSDSLNDVRAWTLVAAVVIGYMVSRGLAKSGTKHVGDPSN*
Ga0127458_112519423300010112Grasslands SoilAWTLVAAVGIGYMISRGLAKSGTKYVGEDPLTQDNR*
Ga0126321_137523713300010145SoilLVAAVSIGYIVSRGLAKSGSKYFGSEDPVNSDDR*
Ga0126306_1047924433300010166Serpentine SoilWVSDSLDDVRAWTLVAAVSIGYMISRGLAKSGTKYAGGEDPLNRDNR*
Ga0134125_1237228123300010371Terrestrial SoilGDVRAWTLVAAVGIGYMISRGLAKSGTKYAGGEDPLNQVNR*
Ga0134126_1297666913300010396Terrestrial SoilTLVAAVAIGYMVSRGLAKSGSRYAGGEDLLNRNDH*
Ga0134124_1150722413300010397Terrestrial SoilAVSDSLNDVRAWTLVAAIGIGYMISRGLAKSGTKYAGSEDPLNRNDR*
Ga0138505_10001954613300010999SoilSDSLDDIRAWTLVAAVSIGYMISRGLAKSGTKYVGSENN*
Ga0120146_101954623300011992PermafrostSAVSDSLGDVRAWTLVAAIGIGYMISRGLAKAGTRYVGGEDPLNRENH*
Ga0137375_1098403123300012360Vadose Zone SoilASAVSDSLGDVRAWTLVAAIAIGYMLSRGLAKSGTKYAGGEDPLNQNSR*
Ga0134044_128494133300012395Grasslands SoilASAVSDSLGDVRAWTLVAAVGIGYMISRGLAKSGTKHAGGEDPLNQNNR*
Ga0157314_100580013300012500Arabidopsis RhizosphereRAWTLVAAVAIGYMLSRGLAKSGTKYVGDEDPLNRNDH*
Ga0157302_1008975133300012915SoilSAYSDSLGDVRAWTLVAAIGIGYMISRGLAKAGTKYAGGEDPLNNNR*
Ga0164298_1118284413300012955SoilAVSDSLGDVRDWTLVAAVGIGYIISRGLAKSGTRYAGGEDPFRHNNG*
Ga0134087_1029612833300012977Grasslands SoilTLVAAVSIGYMLSRGLAKSGTKYAGAEDLLNRDNR*
Ga0157372_1111394133300013307Corn RhizosphereSAVSDSFGDRRAWTLVAAVAIGYMISRGLAKSGTKYVGGEDPLNRNDR*
Ga0182001_1033020513300014488SoilDSLNDVRAWTLVAAVAIGYMISRGLAKSGSKYAGSEDPLNRDNR*
Ga0173483_1030284323300015077SoilAWTLVAAVAIGYMISRGLAKSGTKYAGGEDPLASNDR*
Ga0173480_1082788223300015200SoilGDIRAWTLVAVVAVGYMISRGLAKSGTKYVGGEDPLNRNN*
Ga0184610_116081723300017997Groundwater SedimentLNDVRAWTLIAAVAIGYMISRGLAKSGTKYAGGEDPLNRNNH
Ga0184605_1011990713300018027Groundwater SedimentDVRAWTLVAAVSIGYIISRGLAKSGSRYVGGEDPLNRDDR
Ga0184608_1015980133300018028Groundwater SedimentAVSDSLGDVRAWTLVAAVGIGYMISRGLAKSGTKYTGGEDSLNQNNR
Ga0184634_1019768223300018031Groundwater SedimentWVSDSLNDVRAWTLVAAVAIGYMISRGLAKSGTKYVGGDDPLNRNDR
Ga0184626_1039871223300018053Groundwater SedimentDVRAWTLVAAVSIGYIISRGLAKSGSKYFGDEDPLNRDDR
Ga0184621_1008796533300018054Groundwater SedimentSDTFGDRRAWTLVAAVAIGYMISRGLAKSGTKYVGGEDPLNRSNH
Ga0184640_1016415933300018074Groundwater SedimentWTLVAAVSIGYMISRGLAKSGSRYVGGEDPLNCDDR
Ga0184632_1007579233300018075Groundwater SedimentWTLVAAVGIGYMISRGLAKSGTKYAGGEDSLNHNNR
Ga0184632_1026472613300018075Groundwater SedimentGDVRAWTLVAAVAIGYMISRGLAKSGTKYAGEEPLNQNNR
Ga0184609_1025622213300018076Groundwater SedimentDSLNDVRAWTLVAAVAIGYIISRGLAKSGSKYFGSEDPANRDSH
Ga0184625_1056093713300018081Groundwater SedimentGDRRAWTLVAAVAIGYMISRGLAKSGTKYVGGEDPLSRNDH
Ga0184639_1062932313300018082Groundwater SedimentWTLVAAASIGYMISRGVAKSGSRYVGGEDPLNRDDR
Ga0190270_1315388623300018469SoilSDSLNDVRAWTLVAAVSIGYMISRGLAKSGSRDNA
Ga0184643_142060013300019255Groundwater SedimentDSLGDVRAWTLVAAVAIGYMISRGLAKSGTRYVGGEDR
Ga0184644_140171413300019269Groundwater SedimentDDVRAWTLVAAVAIGYMLSRGLAKSGSKYFGHEDLLNRTP
Ga0193704_100066713300019867SoilVSDTFGDRRAWTLVAAVAIGYMISRGLAKSGTKYVGGEDPLSRNDR
Ga0193704_107176713300019867SoilRRAWTLVAAVAIGYMISRGLAKSGTKYVGGEDPANRDN
Ga0193705_100835863300019869SoilSDTFGDRRAWTLVAAVAIGYMISRGLAKSGTKYVGGEDPLNRN
Ga0193705_102522433300019869SoilGDRRAWTLVAAVAIGYMISRGLAKSGTKYVGGEDPVNRNDH
Ga0193705_103063023300019869SoilSFGDRRAWTLVAAVAIGYMISRGLAKSGTKYVGGEDPLKRDDH
Ga0193747_105699633300019885SoilSDSLNDVRAWTLIAAVAIGYMISRGLAKSGTKYAGGEDPLNRNNH
Ga0206356_1174994123300020070Corn, Switchgrass And Miscanthus RhizosphereRAWTLVAAVAIGYMISRGLAKSGTKYAGGEDPLNQGNR
Ga0206351_1017324923300020077Corn, Switchgrass And Miscanthus RhizosphereSDSLNDVRAWTLVAAVGIGYMISRGLAKSGSKYAGGEDPLKQNDR
Ga0206350_1025418333300020080Corn, Switchgrass And Miscanthus RhizosphereDSLGDVRAWTLVAAVAIGYMISRGLAKSGTKYAGGEDPLNQNNR
Ga0206353_1192347413300020082Corn, Switchgrass And Miscanthus RhizosphereSDSLGDVRAWTLVAAVAIGYMISRGLAKSGTKYAGGEDPLNQGNR
Ga0222625_105346313300022195Groundwater SedimentWVSDSLNDVRAWTLVAAVAIGYMISRGLAKSGTQYAGSEDPLDRDNR
Ga0224452_104762813300022534Groundwater SedimentTLVAAVGIGYMISRGLAKSGTKYTGGEDSLNHDDR
Ga0222623_1011632333300022694Groundwater SedimentVSDTFGDRRAWTLVAAVAIGYMISRGLAKSGTKYVGGEDPLNRSNH
Ga0222622_1000382813300022756Groundwater SedimentRRAWTLVAAVAIGYMISRGLAKSGTKYVDGEDSRNDH
Ga0222622_1022981833300022756Groundwater SedimentASAVSDTFGDRRAWTLVAAVAIGYMISRGLAKSGTKYVGGEDPVNRNDH
Ga0222622_1030887033300022756Groundwater SedimentTFGDRRAWTLVAAVAIGYMISRGLAKSGTKYVGGEDPLNRN
Ga0247787_103717113300022893SoilATAVSDSLNDVRAWTLVAAVAIGYIVSRGLAKSGTKYTGAEDPLNRNGN
Ga0207649_1068866713300025920Corn RhizosphereLGDVRAWTLVTVVAAAYIISRGLAKAGSRYSGGEDPLTR
Ga0207652_1150656813300025921Corn RhizosphereAVSDSLNDVRAWTLVAAVGIGYMVSRGLAKSGSRYAGGEDPLNSDR
Ga0207659_1176331223300025926Miscanthus RhizosphereAAAVSDSLGDVRAWTLVTVVAAAYIISRGLAKAGSRYSGGEDPLTR
Ga0207669_1009756623300025937Miscanthus RhizosphereRAWTLVTIVAAAYILSRGLAKAGSRYTGSDDPLNRNDR
Ga0207689_1054362113300025942Miscanthus RhizosphereDSLGDVRAWTLVTVVAAAYIISRGLAKAGSRYSGGEDPLNR
Ga0247819_1105039023300028608SoilTLVTAVVVGYVISRGLAKSGSRYLGGDDPLRRDER
Ga0307322_1001580313300028710SoilRRAWTLVAAVAIGYMISRGLAKSGTKYVGGEDPLSRNDH
Ga0307322_1003187733300028710SoilRRAWTLVAAVAIGYMISRGLAKSGTKYVGGEDPLNRNDH
Ga0307322_1008964713300028710SoilWVSDSLDDVRAWTLVAAVSIGYMISRGLAKSGTKYAGSEDPLNRDNR
Ga0307293_1011909413300028711SoilTFGDRRAWTLVAAVAIGYMISRGLAKSGTKYVGGEDPLSRNDR
Ga0307293_1016813033300028711SoilTFGDRRAWTLVAAVAIGYMISRGLAKSGTKYVGGEDPLNRNDH
Ga0307285_1000932353300028712SoilYSDSLDDVRARTLVAAIGIGYMISRGLAKSGTKYAGGEDPLNNR
Ga0307313_1003797143300028715SoilDTFGDRRAWTLVAAVAIGYMISRGLAKSGTKYVGGEDPLNRN
Ga0307313_1004453633300028715SoilAWTLVAAVAIGYMISRGLAKSGTKYVGGEDPLSRNDR
Ga0307311_1026905433300028716SoilASAVSDSFGDRRAWTLVAAVAIGYMISRGLAKSGTKYVGGEDPANRDN
Ga0307307_1002203743300028718SoilVSDSLSDVRAWTLVAAVGIGYMISRGLAKSGTKYTGGEDSLNQNNR
Ga0307307_1006227013300028718SoilFGDRRAWTLVAAVAIGYMISRGLAKSGTKYVGGEDPLSRNDR
Ga0307317_1001134113300028720SoilDRRAWTLVAAVAIGYMISRGLAKSGTKYVGGEDPLNRN
Ga0307317_1002089543300028720SoilGDRRAWTLVAAVAIGYMISRGLAKSGTKYVGGEDPLSRNDR
Ga0307315_1026840123300028721SoilLNDVRAWTLVAAVAIGYMISRGLAKSGSRYAGGEDPLKRDDR
Ga0307319_1003186713300028722SoilVSDSLDDVRAWTLVAAVSIGYIISRGLAKSGSKYVGGEDPLNRNDR
Ga0307318_1005838013300028744SoilAWTLVAAVAIGYMISRGLAKSGTKYVGGEDPLNRN
Ga0307316_1000401993300028755SoilFGDRRAWTLVAAVAIGYMISRGLAKSGTKYVGGEDPLNRN
Ga0307320_1014732733300028771SoilSLNDVRAWTLVAAVAIGYMVSRGLAKSGTKYAGGEDPLNRNN
Ga0307320_1026883523300028771SoilDVRAWTLVAAVAIGYMISRGLAKSGTKYPGGEPRNQNNR
Ga0307282_1009886513300028784SoilSFGDRRAWTLVAAVAIGYMISRGLAKSGTKYVGGEDPLSRNDH
Ga0307282_1010677533300028784SoilRAWTLVAAVAIGYMISRGLAKSGTKYVGGEDPVNRNDH
Ga0307323_1000474413300028787SoilGDRRAWTLVAAVAIGYMISRGLAKSGTKYVGGEDPLNRN
Ga0307299_1026729513300028793SoilWTLVAAVAIGYMISRGLAKSGTKYAGGEDPLSRSNH
Ga0307294_1001084713300028810SoilVSDTFGDRRAWTLVAAVAIGYMISRGLAKSGTKYVGGEDPLNRN
Ga0307294_1007647633300028810SoilFGDRRAWTLVAAVAIGYMISRGLAKSGTKYVGGEDPANRDN
Ga0307302_1012007613300028814SoilIASAVSDTFGDRRAWTLVAAVAIGYMISRGLAKSGTKYVGGEDPVNRNDH
Ga0307302_1014753813300028814SoilAVSDSFGDRRAWTLVAAVAIGYMISRGLAKSGTKYVGGEDPANRDN
Ga0307310_1009192233300028824SoilASAVSDTFGDRRAWTLVAAVAIGYMISRGLAKSGTKYVGGEDPLNRNDH
Ga0307310_1022990433300028824SoilRAWTLVAAVAIGYMISRGLAKSGTKYVGGEDPVNNR
Ga0307312_10002668103300028828SoilIASAVSDTFGDRRAWTLVAAVAIGYMISRGLAKSGTKYVGGEDPLNH
Ga0307312_1001769283300028828SoilIASAVSDTFGDRRAWTLVAAVAIGYMISRGLAKSGAKYVGGEDPLNRN
Ga0307312_1024979433300028828SoilRRAWTLVAAVAIGYMISRGLAKSGTKYVGGEDPVNNR
Ga0307312_1077964613300028828SoilDTFGDRRAWTLVAAVAIGYMISRGLAKSGTKYVGSEDPVNRDNH
Ga0307300_1023524213300028880SoilDDVRAWTLVAAVAIGYMISRGLAKSGTKYAGGEDPLNRDNR
Ga0307277_1010608513300028881SoilWTLVAAVAIGYMISRGLAKSGTKYVGGEDPLNRSNH
Ga0308205_100285813300030830SoilSDSLNDVRAWTLVAAVAIGYMISRGLAKSGTKYAGSEDPLNRDNR
Ga0308205_102690733300030830SoilDTFGDRRAWTLVAAVAIGYMISRGLAKSGTKYVGGEDPLNRNDH
Ga0308205_105299223300030830SoilRAWTLVAAVGIGYMISRGLAKSGTKYTGGEDSLNQNNR
Ga0308202_100491113300030902SoilLIASAVSDTFGDRRAWTLVAAVAIGYMISRGLAKSGTKYVGGEDPLNRNDH
Ga0308202_100604213300030902SoilVSDTFGDRRAWTLVAAVAIGYMISRGLAKSGTKYAGGEDPVNNR
Ga0308202_108920923300030902SoilDRRAWTLVAAVAIGYMISRGLAKSGTNYVGGEDPANRDN
Ga0308206_100268043300030903SoilSAVSDSLGDVRAWTLVAAVAIGYMLSRGLAKSGTKYVGDEEPLDRADR
Ga0308206_101733533300030903SoilSDTFGDRRAWTLVAAVAIGYMISRGLAKSGTKYVGGEDPVNRNDH
Ga0308206_103146833300030903SoilDSLGDVRAWTLVAAVGIGYMISRGLAKSGTKYTGGEDSLNQNNR
Ga0308206_105711313300030903SoilDVRAWTLVAAVAIGYMISRGLAKSGTKYVGTEDPLNRTSH
Ga0308206_109880913300030903SoilAWTLVAAVGIGYMISRGLAKSGTKYTGGEDSLNHDDR
Ga0308206_113917213300030903SoilTFGDRRAWTLVAAVAIGYMISRGLAKSGTKYVGGEDPLNRSNH
Ga0308206_118519913300030903SoilDSLGDVRAWTLVAAVAIGYMISRGLAKSGTKHVGGDDTNRNN
Ga0308200_115963833300030905SoilAWTLVAAVAIGYMISRGLAKSGTKYVGGEDPANRDN
Ga0308183_117704423300030988SoilGDRRAWTLVAAVAIGYMISRGLAKSGTKYVGGEDPANRDN
Ga0308189_1048612313300031058SoilAVSDTFGDRRAWTLVAAVAIGYMISRGLAKSGTKYVGGEDPVNNR
Ga0102748_1170414123300031089SoilAWTLVAAVAIGYMISRGLAKSGTKYVGGEDPLNRSNH
Ga0308201_1007128413300031091SoilIASAVSDTFGDRRAWTLVAAVAIGYMISRGLAKSGTKYVGGEDPLNRN
Ga0308201_1017548513300031091SoilWVSDSLDDVRAWTLVAAVAIGYMISRGLAKSGTKYVGSEDPLNRDNR
Ga0308201_1022981923300031091SoilASAVSDSLDDVRAWTLVAAIGIGYMISRGLAKSGTKYAGGDDPLNNR
Ga0308204_1000612413300031092SoilDVRAWTLVAAVAIGYIISRGLAKSGSKYVGGEDPLNRN
Ga0308204_1005632733300031092SoilWTLVAAVAIGYMISRGLAKSGTKYPAEAPLDQNNR
Ga0308204_1006333913300031092SoilASAVSDSLGDVRAWTLVAAVGIGYMISRGLAKSGTKYTGGEDSLNNR
Ga0308204_1017034823300031092SoilSLNDVRAWTLVAAVAIGYMISRGLAKSGSRYAGGEDPLKRDDR
Ga0308204_1035144023300031092SoilSDTFGDRRAWTLVAAVAIGYMISRGLAKSGTKYAGGEDPLNRND
Ga0307410_1082676813300031852RhizosphereDVRAWTLVAAVSIGYMISRGLAKSGTKYAGSEDPLNRDN
Ga0247829_1103474813300033550SoilAWTLVAAVGIGYMISRGLAKSGSKYADGEDPLNNR
Ga0247829_1130127823300033550SoilDSLGDVRAWTLVAAIGIGYMISRGLAKAGTKYAGGEDPLNNNR

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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