NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F051860

Metagenome / Metatranscriptome Family F051860

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F051860
Family Type Metagenome / Metatranscriptome
Number of Sequences 143
Average Sequence Length 43 residues
Representative Sequence MKLSINEVWGQVYLLPFIKFTHTRQLNGDLELIIGYLKWEIVIGI
Number of Associated Samples 123
Number of Associated Scaffolds 143

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 42.75 %
% of genes near scaffold ends (potentially truncated) 34.27 %
% of genes from short scaffolds (< 2000 bps) 69.23 %
Associated GOLD sequencing projects 121
AlphaFold2 3D model prediction Yes
3D model pTM-score0.56

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Unclassified (61.538 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water
(9.790 % of family members)
Environment Ontology (ENVO) Unclassified
(31.469 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Water (non-saline)
(42.657 % of family members)


 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      

 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 0.00%    β-sheet: 43.84%    Coil/Unstructured: 56.16%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.56
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 143 Family Scaffolds
PF00149Metallophos 9.09
PF00383dCMP_cyt_deam_1 8.39
PF12850Metallophos_2 5.59
PF01223Endonuclease_NS 2.10
PF13585CHU_C 2.10
PF08406CbbQ_C 2.10
PF00156Pribosyltran 1.40
PF02195ParBc 1.40
PF01471PG_binding_1 1.40
PF00085Thioredoxin 1.40
PF07728AAA_5 0.70
PF01569PAP2 0.70
PF05721PhyH 0.70
PF12705PDDEXK_1 0.70
PF00535Glycos_transf_2 0.70
PF00908dTDP_sugar_isom 0.70
PF01832Glucosaminidase 0.70
PF03016Exostosin 0.70
PF01048PNP_UDP_1 0.70
PF13715CarbopepD_reg_2 0.70
PF10504DUF2452 0.70
PF136402OG-FeII_Oxy_3 0.70
PF00574CLP_protease 0.70

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 143 Family Scaffolds
COG0714MoxR-like ATPaseGeneral function prediction only [R] 2.10
COG1864DNA/RNA endonuclease G, NUC1Nucleotide transport and metabolism [F] 2.10
COG0616Periplasmic serine protease, ClpP classPosttranslational modification, protein turnover, chaperones [O] 1.40
COG0740ATP-dependent protease ClpP, protease subunitPosttranslational modification, protein turnover, chaperones [O] 1.40
COG0775Nucleoside phosphorylase/nucleosidase, includes 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase MtnN and futalosine hydrolase MqnBNucleotide transport and metabolism [F] 0.70
COG0813Purine-nucleoside phosphorylaseNucleotide transport and metabolism [F] 0.70
COG1030Membrane-bound serine protease NfeD, ClpP classPosttranslational modification, protein turnover, chaperones [O] 0.70
COG1898dTDP-4-dehydrorhamnose 3,5-epimerase or related enzymeCell wall/membrane/envelope biogenesis [M] 0.70
COG2820Uridine phosphorylaseNucleotide transport and metabolism [F] 0.70
COG5285Ectoine hydroxylase-related dioxygenase, phytanoyl-CoA dioxygenase (PhyH) familySecondary metabolites biosynthesis, transport and catabolism [Q] 0.70

 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A61.54 %
All OrganismsrootAll Organisms38.46 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000385|PR_CR_10_Liq_1_inCRDRAFT_1060696All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon628Open in IMG/M
3300001968|GOS2236_1066348All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium6194Open in IMG/M
3300002132|M2t6BS2_1099441All Organisms → Viruses → Predicted Viral1781Open in IMG/M
3300002274|B570J29581_107505Not Available668Open in IMG/M
3300002835|B570J40625_100004796Not Available25256Open in IMG/M
3300003346|JGI26081J50195_1000562Not Available15889Open in IMG/M
3300003427|JGI26084J50262_1074051All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon741Open in IMG/M
3300003986|Ga0063233_10003320All Organisms → cellular organisms → Bacteria3237Open in IMG/M
3300004240|Ga0007787_10004321Not Available5299Open in IMG/M
3300005581|Ga0049081_10133557Not Available914Open in IMG/M
3300005582|Ga0049080_10041048Not Available1606Open in IMG/M
3300005662|Ga0078894_10482640Not Available1114Open in IMG/M
3300005662|Ga0078894_11034708Not Available705Open in IMG/M
3300005805|Ga0079957_1007383Not Available8643Open in IMG/M
3300006752|Ga0098048_1018231All Organisms → cellular organisms → Bacteria2376Open in IMG/M
3300007177|Ga0102978_1295611All Organisms → cellular organisms → Bacteria1296Open in IMG/M
3300007345|Ga0070752_1317830Not Available590Open in IMG/M
3300007538|Ga0099851_1161373All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon831Open in IMG/M
3300007541|Ga0099848_1347165Not Available500Open in IMG/M
3300007554|Ga0102820_1069429Not Available848Open in IMG/M
3300007557|Ga0102821_1021854All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Elemovirus1722Open in IMG/M
3300007609|Ga0102945_1047518Not Available847Open in IMG/M
3300007634|Ga0102901_1193468All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage573Open in IMG/M
3300007681|Ga0102824_1070508All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Elemovirus918Open in IMG/M
3300007960|Ga0099850_1039829All Organisms → Viruses → Predicted Viral2028Open in IMG/M
3300008107|Ga0114340_1095541Not Available1198Open in IMG/M
3300008107|Ga0114340_1100234All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1160Open in IMG/M
3300008107|Ga0114340_1129708Not Available961Open in IMG/M
3300008108|Ga0114341_10079754Not Available2036Open in IMG/M
3300008110|Ga0114343_1101977All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes992Open in IMG/M
3300008113|Ga0114346_1038771Not Available2453Open in IMG/M
3300008116|Ga0114350_1015515Not Available7200Open in IMG/M
3300008116|Ga0114350_1043705Not Available1676Open in IMG/M
3300008120|Ga0114355_1043364Not Available2111Open in IMG/M
3300008120|Ga0114355_1195550Not Available658Open in IMG/M
3300008448|Ga0114876_1063990Not Available1595Open in IMG/M
3300008448|Ga0114876_1079741All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon1363Open in IMG/M
3300008450|Ga0114880_1169445Not Available765Open in IMG/M
3300009082|Ga0105099_10158446Not Available1279Open in IMG/M
3300009172|Ga0114995_10004634All Organisms → cellular organisms → Bacteria9119Open in IMG/M
3300009420|Ga0114994_10171657Not Available1466Open in IMG/M
3300010296|Ga0129348_1305759Not Available530Open in IMG/M
3300010297|Ga0129345_1090878All Organisms → Viruses → Predicted Viral1137Open in IMG/M
3300012012|Ga0153799_1003517Not Available4054Open in IMG/M
3300013004|Ga0164293_10021078Not Available5442Open in IMG/M
(restricted) 3300013127|Ga0172365_10029304Not Available3823Open in IMG/M
(restricted) 3300013131|Ga0172373_10496920Not Available743Open in IMG/M
(restricted) 3300013132|Ga0172372_10950691Not Available522Open in IMG/M
(restricted) 3300013133|Ga0172362_10035604Not Available3987Open in IMG/M
3300013372|Ga0177922_10124620Not Available878Open in IMG/M
3300017716|Ga0181350_1102597Not Available702Open in IMG/M
3300017761|Ga0181356_1039354All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon1667Open in IMG/M
3300017766|Ga0181343_1056552Not Available1145Open in IMG/M
3300017766|Ga0181343_1058873All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium1119Open in IMG/M
3300017778|Ga0181349_1010600All Organisms → Viruses → Predicted Viral3834Open in IMG/M
3300017778|Ga0181349_1098438Not Available1097Open in IMG/M
3300017785|Ga0181355_1028613Not Available2410Open in IMG/M
3300017788|Ga0169931_10834779Not Available588Open in IMG/M
3300017818|Ga0181565_10031148All Organisms → Viruses → Predicted Viral3924Open in IMG/M
3300018041|Ga0181601_10206117All Organisms → Viruses → Predicted Viral1150Open in IMG/M
3300018416|Ga0181553_10377608All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon774Open in IMG/M
3300018418|Ga0181567_10635976All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon686Open in IMG/M
3300020055|Ga0181575_10280804All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Elemovirus950Open in IMG/M
3300020074|Ga0194113_10752738Not Available671Open in IMG/M
3300020084|Ga0194110_10970924Not Available500Open in IMG/M
3300020109|Ga0194112_10521251Not Available828Open in IMG/M
3300020109|Ga0194112_10725605Not Available660Open in IMG/M
3300020162|Ga0211735_10557728All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon1365Open in IMG/M
3300020176|Ga0181556_1021013All Organisms → Viruses → Predicted Viral3921Open in IMG/M
3300020178|Ga0181599_1217743All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Elemovirus754Open in IMG/M
3300020183|Ga0194115_10032260Not Available3663Open in IMG/M
3300020184|Ga0181573_10416176All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Sphingobacteriia → unclassified Sphingobacteriia → Sphingobacteriia bacterium 28-36-52615Open in IMG/M
3300020506|Ga0208091_1000350Not Available9009Open in IMG/M
3300020524|Ga0208858_1030072Not Available783Open in IMG/M
3300020553|Ga0208855_1012850Not Available1335Open in IMG/M
3300020575|Ga0208053_1019505Not Available1335Open in IMG/M
3300020603|Ga0194126_10157930Not Available1699Open in IMG/M
3300021335|Ga0213867_1181004All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Elemovirus709Open in IMG/M
3300021356|Ga0213858_10249701All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon854Open in IMG/M
3300021959|Ga0222716_10142349All Organisms → Viruses → Predicted Viral1574Open in IMG/M
3300021960|Ga0222715_10092578Not Available1969Open in IMG/M
3300021961|Ga0222714_10000408Not Available50142Open in IMG/M
3300021961|Ga0222714_10025426All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon4520Open in IMG/M
3300021961|Ga0222714_10136465All Organisms → Viruses → Predicted Viral1492Open in IMG/M
3300021961|Ga0222714_10283338All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Elemovirus915Open in IMG/M
3300021961|Ga0222714_10463573Not Available657Open in IMG/M
3300021962|Ga0222713_10010113Not Available8523Open in IMG/M
3300021962|Ga0222713_10143111All Organisms → Viruses → Predicted Viral1659Open in IMG/M
3300021962|Ga0222713_10767319All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Elemovirus542Open in IMG/M
3300021962|Ga0222713_10821501Not Available517Open in IMG/M
3300021963|Ga0222712_10000708Not Available42631Open in IMG/M
3300021963|Ga0222712_10312529Not Available981Open in IMG/M
3300021963|Ga0222712_10479318All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon740Open in IMG/M
3300022190|Ga0181354_1017940Not Available2209Open in IMG/M
3300022407|Ga0181351_1164601Not Available782Open in IMG/M
3300022926|Ga0255753_1033945All Organisms → Viruses → Predicted Viral3212Open in IMG/M
3300022929|Ga0255752_10243002All Organisms → cellular organisms → Bacteria805Open in IMG/M
3300023105|Ga0255782_10091257All Organisms → Viruses → Predicted Viral1629Open in IMG/M
3300023110|Ga0255743_10280585All Organisms → cellular organisms → Bacteria870Open in IMG/M
3300024346|Ga0244775_10000558Not Available45804Open in IMG/M
3300024505|Ga0255150_1012678Not Available1462Open in IMG/M
3300024515|Ga0255183_1023076Not Available1506Open in IMG/M
3300024570|Ga0255276_1099726Not Available774Open in IMG/M
3300024865|Ga0256340_1099049Not Available712Open in IMG/M
3300025070|Ga0208667_1014247Not Available1703Open in IMG/M
3300025543|Ga0208303_1065807Not Available837Open in IMG/M
3300025610|Ga0208149_1017786All Organisms → Viruses → Predicted Viral2058Open in IMG/M
3300025640|Ga0209198_1192990All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage524Open in IMG/M
3300025671|Ga0208898_1042264Not Available1734Open in IMG/M
3300026138|Ga0209951_1016026Not Available1659Open in IMG/M
3300027293|Ga0255132_1026082Not Available1418Open in IMG/M
3300027581|Ga0209651_1207766Not Available509Open in IMG/M
3300027595|Ga0255122_1018581Not Available1328Open in IMG/M
3300027779|Ga0209709_10002170Not Available17447Open in IMG/M
3300027792|Ga0209287_10150950All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon881Open in IMG/M
3300027797|Ga0209107_10246671Not Available860Open in IMG/M
3300028025|Ga0247723_1080005All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon862Open in IMG/M
3300028103|Ga0255172_1035024Not Available941Open in IMG/M
3300031227|Ga0307928_10305280All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium786Open in IMG/M
3300031519|Ga0307488_10019011Not Available5552Open in IMG/M
3300031519|Ga0307488_10076307All Organisms → Viruses → Predicted Viral2505Open in IMG/M
3300031539|Ga0307380_10032925Not Available5950Open in IMG/M
3300031578|Ga0307376_10366602All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon952Open in IMG/M
3300031669|Ga0307375_10454307All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon782Open in IMG/M
3300031707|Ga0315291_10830946Not Available800Open in IMG/M
3300031758|Ga0315907_10128962Not Available2154Open in IMG/M
3300031787|Ga0315900_10299886All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1332Open in IMG/M
3300031857|Ga0315909_10008939Not Available10910Open in IMG/M
3300033418|Ga0316625_102441004Not Available527Open in IMG/M
3300033992|Ga0334992_0003432Not Available11811Open in IMG/M
3300034061|Ga0334987_0497251Not Available744Open in IMG/M
3300034062|Ga0334995_0704979Not Available568Open in IMG/M
3300034072|Ga0310127_063227All Organisms → Viruses → Predicted Viral1763Open in IMG/M
3300034073|Ga0310130_0098673All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Neisseriales → Neisseriaceae → unclassified Neisseriaceae → Neisseriaceae bacterium877Open in IMG/M
3300034102|Ga0335029_0697618Not Available551Open in IMG/M
3300034103|Ga0335030_0238546All Organisms → Viruses → Predicted Viral1247Open in IMG/M
3300034106|Ga0335036_0084028All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon2366Open in IMG/M
3300034283|Ga0335007_0348615Not Available949Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).


 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Freshwater LakeEnvironmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake9.79%
Estuarine WaterEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water9.79%
AqueousEnvironmental → Aquatic → Marine → Coastal → Unclassified → Aqueous8.39%
Salt MarshEnvironmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh8.39%
FreshwaterEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater7.69%
Freshwater, PlanktonEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Plankton6.99%
Freshwater LakeEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake6.99%
FreshwaterEnvironmental → Aquatic → Freshwater → River → Unclassified → Freshwater4.90%
FreshwaterEnvironmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater3.50%
MarineEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine3.50%
EstuarineEnvironmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine2.80%
FreshwaterEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater2.10%
SedimentEnvironmental → Aquatic → Freshwater → Lake → Sediment → Sediment2.10%
FreshwaterEnvironmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater2.10%
MarineEnvironmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine2.10%
SoilEnvironmental → Terrestrial → Soil → Clay → Unclassified → Soil2.10%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment1.40%
Freshwater LenticEnvironmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lentic1.40%
SeawaterEnvironmental → Aquatic → Marine → Coastal → Unclassified → Seawater1.40%
Sackhole BrineEnvironmental → Aquatic → Marine → Coastal → Unclassified → Sackhole Brine1.40%
Freshwater To Marine Saline GradientEnvironmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient1.40%
Pond WaterEnvironmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Pond Water1.40%
Fracking WaterEnvironmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Fracking Water1.40%
FreshwaterEnvironmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater0.70%
Freshwater And SedimentEnvironmental → Aquatic → Freshwater → Lentic → Hypolimnion → Freshwater And Sediment0.70%
LakeEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Lake0.70%
EnviromentalEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Enviromental0.70%
EstuarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine0.70%
Pelagic MarineEnvironmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine0.70%
Saline WaterEnvironmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Saline Water0.70%
MarineEnvironmental → Aquatic → Unclassified → Unclassified → Unclassified → Marine0.70%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil0.70%
Deep Subsurface SedimentEnvironmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface Sediment0.70%

Visualization
Powered by ApexCharts



Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000385Marine microbial community from Cabo Rojo, Puerto Rico - PR CR 10% Liquid 1EnvironmentalOpen in IMG/M
3300001968Marine microbial communities from Lake Gatun, Panama - GS020EnvironmentalOpen in IMG/M
3300002132Marine microbial communities from the Baltic Sea, analyzing arctic terrigenous carbon compounds - M2t6BS2 (105f)EnvironmentalOpen in IMG/M
3300002274Freshwater microbial communities from Lake Mendota, WI - 12OCT2012 deep hole epilimnionEnvironmentalOpen in IMG/M
3300002835Freshwater microbial communities from Lake Mendota, WI - (Lake Mendota Combined Ray assembly, ASSEMBLY_DATE=20140605)EnvironmentalOpen in IMG/M
3300003346Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - ESP_74LU_5_DNAEnvironmentalOpen in IMG/M
3300003427Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - ESP_116LU_22_DNAEnvironmentalOpen in IMG/M
3300003986Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM110.SN (v2)EnvironmentalOpen in IMG/M
3300004240Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MLB.SNEnvironmentalOpen in IMG/M
3300005581Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER78MSRFEnvironmentalOpen in IMG/M
3300005582Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER15MSRFEnvironmentalOpen in IMG/M
3300005662Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MLB.SD (version 4)EnvironmentalOpen in IMG/M
3300005805Microbial and algae communities from Cheney Reservoir in Wichita, Kansas, USAEnvironmentalOpen in IMG/M
3300006025Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_D_<0.8_DNAEnvironmentalOpen in IMG/M
3300006752Marine viral communities from the Subarctic Pacific Ocean - 13_ETSP_OMZ_AT15268 metaGEnvironmentalOpen in IMG/M
3300007177Combined Assembly of cyanobacterial bloom in Marina Bay water reservoir, Singapore (Diel cycle-Surface and Bottom layers) 16 sequencing projectsEnvironmentalOpen in IMG/M
3300007345Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_30EnvironmentalOpen in IMG/M
3300007538Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_2 Viral MetaGEnvironmentalOpen in IMG/M
3300007539Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1M Viral MetaGEnvironmentalOpen in IMG/M
3300007541Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1S Viral MetaGEnvironmentalOpen in IMG/M
3300007542Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_1 Viral MetaGEnvironmentalOpen in IMG/M
3300007554Estuarine microbial communities from the Columbia River estuary - Ebb tide non-ETM metaG S.709EnvironmentalOpen in IMG/M
3300007557Estuarine microbial communities from the Columbia River estuary - Ebb tide non-ETM metaG S.715EnvironmentalOpen in IMG/M
3300007609Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG R2_restored_H2O_MGEnvironmentalOpen in IMG/M
3300007634Estuarine microbial communities from the Columbia River estuary - metaG 1555A-02EnvironmentalOpen in IMG/M
3300007681Estuarine microbial communities from the Columbia River estuary - Ebb tide non-ETM metaG S.753EnvironmentalOpen in IMG/M
3300007960Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1D Viral MetaGEnvironmentalOpen in IMG/M
3300008107Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE2, Sample E2014-0046-3-NAEnvironmentalOpen in IMG/M
3300008108Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample E2014-0048-C-NAEnvironmentalOpen in IMG/M
3300008110Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample E2014-0048-3-NAEnvironmentalOpen in IMG/M
3300008113Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE4, Sample E2014-0050-3-NAEnvironmentalOpen in IMG/M
3300008116Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE2, Sample E2014-0106-3-NAEnvironmentalOpen in IMG/M
3300008120Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample E2014-0108-3-NAEnvironmentalOpen in IMG/M
3300008448Freshwater viral communities during cyanobacterial harmful algal blooms (CHABs) in Western Lake Erie, USA - August 4, 2014 all contigsEnvironmentalOpen in IMG/M
3300008450Freshwater viral communities during cyanobacterial harmful algal blooms (CHABs) in Western Lake Erie, USA - Oct 27, 2014 all contigsEnvironmentalOpen in IMG/M
3300009082Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 1-3cm May2015EnvironmentalOpen in IMG/M
3300009172Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_154EnvironmentalOpen in IMG/M
3300009420Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_152EnvironmentalOpen in IMG/M
3300010296Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_27_0.8_DNAEnvironmentalOpen in IMG/M
3300010297Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_20_0.8_DNAEnvironmentalOpen in IMG/M
3300012012Freshwater microbial communities from Eastern Basin Lake Erie, Ontario, Canada - Station 879 - Top - Depth 1mEnvironmentalOpen in IMG/M
3300013004Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES118 metaGEnvironmentalOpen in IMG/M
3300013127 (restricted)Sediment microbial communities from Lake Kivu, Rwanda - Sediment site 48cmEnvironmentalOpen in IMG/M
3300013131 (restricted)Freshwater microbial communities from Kabuno Bay, South-Kivu, Congo ? kab_092012_10mEnvironmentalOpen in IMG/M
3300013132 (restricted)Freshwater microbial communities from Kabuno Bay, South-Kivu, Congo ? kab_092012_9.5mEnvironmentalOpen in IMG/M
3300013133 (restricted)Sediment microbial communities from Lake Kivu, Rwanda - Sediment s1_kivu2a2EnvironmentalOpen in IMG/M
3300013372Freshwater microbial communities from Lake Erie, Ontario, Canada. Combined Assembly of 10 SPsEnvironmentalOpen in IMG/M
3300017716Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM110.DCM.DEnvironmentalOpen in IMG/M
3300017761Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM110.S.NEnvironmentalOpen in IMG/M
3300017766Freshwater viral communities from Lake Michigan, USA - Su13.VD.MLB.S.DEnvironmentalOpen in IMG/M
3300017778Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM110.S.DEnvironmentalOpen in IMG/M
3300017785Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM15.D.NEnvironmentalOpen in IMG/M
3300017788Freshwater microbial communities from Lake Kivu, Western Province, Rwanda to study Microbial Dark Matter (Phase II) - Kivu_15m_20LEnvironmentalOpen in IMG/M
3300017818Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101401AT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300018041Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041407BS metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300018416Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011502XT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300018418Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101403AT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300020055Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101411CT metaG (spades assembly)EnvironmentalOpen in IMG/M
3300020074Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015017 Mahale Deep Cast 200mEnvironmentalOpen in IMG/M
3300020084Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015032 Kigoma Deep Cast 1200mEnvironmentalOpen in IMG/M
3300020109Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015016 Mahale Deep Cast 400mEnvironmentalOpen in IMG/M
3300020162Freshwater lake microbial communities from Lake Erken, Sweden - P4710_201 megahit1EnvironmentalOpen in IMG/M
3300020176Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011505AT metaG (spades assembly)EnvironmentalOpen in IMG/M
3300020178Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041405US metaG (spades assembly)EnvironmentalOpen in IMG/M
3300020183Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015002 Mahale S4 surfaceEnvironmentalOpen in IMG/M
3300020184Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101409BT metaG (spades assembly)EnvironmentalOpen in IMG/M
3300020506Freshwater microbial communities from Lake Mendota, WI - 26OCT2012 deep hole epilimnion (SPAdes)EnvironmentalOpen in IMG/M
3300020524Freshwater microbial communities from Lake Mendota, WI - 16NOV2012 deep hole epilimnion (SPAdes)EnvironmentalOpen in IMG/M
3300020553Freshwater microbial communities from Lake Mendota, WI - 17MAY2012 deep hole epilimnion (SPAdes)EnvironmentalOpen in IMG/M
3300020575Freshwater microbial communities from Lake Mendota, WI - 20MAY2010 deep hole epilimnion (SPAdes)EnvironmentalOpen in IMG/M
3300020603Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015035 Kigoma Deep Cast 150mEnvironmentalOpen in IMG/M
3300021335Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO540EnvironmentalOpen in IMG/M
3300021356Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO245EnvironmentalOpen in IMG/M
3300021959Estuarine water microbial communities from San Francisco Bay, California, United States - C33_13DEnvironmentalOpen in IMG/M
3300021960Estuarine water microbial communities from San Francisco Bay, California, United States - C33_9DEnvironmentalOpen in IMG/M
3300021961Estuarine water microbial communities from San Francisco Bay, California, United States - C33_3DEnvironmentalOpen in IMG/M
3300021962Estuarine water microbial communities from San Francisco Bay, California, United States - C33_649DEnvironmentalOpen in IMG/M
3300021963Estuarine water microbial communities from San Francisco Bay, California, United States - C33_657DEnvironmentalOpen in IMG/M
3300022190Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM15.S.NEnvironmentalOpen in IMG/M
3300022198Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1S Viral MetaG (v3)EnvironmentalOpen in IMG/M
3300022407Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM15.S.DEnvironmentalOpen in IMG/M
3300022926Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041412US metaGEnvironmentalOpen in IMG/M
3300022929Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011512CT metaGEnvironmentalOpen in IMG/M
3300023105Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101408AT metaGEnvironmentalOpen in IMG/M
3300023110Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101405AT metaGEnvironmentalOpen in IMG/M
3300024346Whole water sample coassemblyEnvironmentalOpen in IMG/M
3300024505Freshwater microbial communities from Altamaha River, Georgia, United States - Atl_Yuk_RepA_8hEnvironmentalOpen in IMG/M
3300024515Freshwater microbial communities from Altamaha River, Georgia, United States - Atl_UVDOM_RepB_8dEnvironmentalOpen in IMG/M
3300024570Metatranscriptome of freshwater microbial communities from Altamaha River, Georgia, United States - Atl_UVDOM_RepB_8h (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300024865Metatranscriptome of freshwater microbial communities from Altamaha River, Georgia, United States - Atl_Colum_RepC_8h (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300025070Marine viral communities from the Subarctic Pacific Ocean - 11B_ETSP_OMZ_AT15265_CsCl metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025543Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_2 Viral MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300025610Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_D_<0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025640Pelagic marine microbial communities from North Sea - COGITO_mtgs_110519 (SPAdes)EnvironmentalOpen in IMG/M
3300025671Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_4 (SPAdes)EnvironmentalOpen in IMG/M
3300026138Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_A_H2O_MG (SPAdes)EnvironmentalOpen in IMG/M
3300027293Freshwater microbial communities from St. Lawrence River, New York, United States - Law_Law_RepA_8dEnvironmentalOpen in IMG/M
3300027581Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM110.SN (SPAdes)EnvironmentalOpen in IMG/M
3300027595Freshwater microbial communities from St. Lawrence River, New York, United States - Law_Colum_RepC_8hEnvironmentalOpen in IMG/M
3300027779Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_136 (SPAdes)EnvironmentalOpen in IMG/M
3300027792Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 1-3cm May2015 (SPAdes)EnvironmentalOpen in IMG/M
3300027797Freshwater microbial communities from dead zone in Lake Erie, Canada - CCB hypolimnion July 2011 (SPAdes)EnvironmentalOpen in IMG/M
3300028025Subsurface sediment microbial communities from gas well in West Virginia, United States - MSEEL Well Study Marcellus 5H_FCEnvironmentalOpen in IMG/M
3300028103Freshwater microbial communities from Altamaha River, Georgia, United States - Atl_Yuk_RepC_8dEnvironmentalOpen in IMG/M
3300031227Saline water microbial communities from Ace Lake, Antarctica - #232EnvironmentalOpen in IMG/M
3300031519Sea-ice brine microbial communities from Beaufort Sea near Barrow, Alaska, United States - SB 0.2EnvironmentalOpen in IMG/M
3300031539Soil microbial communities from Risofladan, Vaasa, Finland - UN-3EnvironmentalOpen in IMG/M
3300031578Soil microbial communities from Risofladan, Vaasa, Finland - TR-2EnvironmentalOpen in IMG/M
3300031669Soil microbial communities from Risofladan, Vaasa, Finland - TR-1EnvironmentalOpen in IMG/M
3300031707Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G12_20EnvironmentalOpen in IMG/M
3300031758Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA123EnvironmentalOpen in IMG/M
3300031787Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA114EnvironmentalOpen in IMG/M
3300031857Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA125EnvironmentalOpen in IMG/M
3300033418Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_T1_C1_D1_AEnvironmentalOpen in IMG/M
3300033992Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME16Jun2014-rr0035EnvironmentalOpen in IMG/M
3300034061Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME02Sep2004-rr0028EnvironmentalOpen in IMG/M
3300034062Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME27Jul2012-rr0045EnvironmentalOpen in IMG/M
3300034072Fracking water microbial communities from deep shales in Oklahoma, United States - MC-3-AEnvironmentalOpen in IMG/M
3300034073Fracking water microbial communities from deep shales in Oklahoma, United States - MC-6-XLEnvironmentalOpen in IMG/M
3300034102Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME17Jul2002-rr0112EnvironmentalOpen in IMG/M
3300034103Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME27Sep2002-rr0119EnvironmentalOpen in IMG/M
3300034106Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME23Aug2013-rr0131EnvironmentalOpen in IMG/M
3300034283Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME07Aug2003-rr0061EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap


 ⦗Top⦘

Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
PR_CR_10_Liq_1_inCRDRAFT_106069633300000385EnviromentalMKFRRCNVWGQIYLFPYLKITHTRELNGDLELIIGWLKWELIIGL*
GOS2236_106634833300001968MarineMKATFCKIYGQFYVLPFIGVTHSRTLNGDLELIIGWGKWELVFGV*
M2t6BS2_109944153300002132MarineMKLNYCKVWGQVYLFPYVKLTHTRFLNGDLELIIGWLKWEAVIGI*
B570J29581_10750533300002274FreshwaterVKLSINEVWGQVYLLPFIKFTHTRQLNGDLELIIGYLKWEIVIGI*
B570J40625_100004796363300002835FreshwaterMKLSINEVWGQVYLLPFIKFTHTRQLNGDLELIIGYLKWEIVIGI*
JGI26081J50195_1000562213300003346MarineMRVTYCEVWGQVYLLPYVKLTHTRTLNGDLELIIGWLKWEIVIGI*
JGI26084J50262_107405123300003427MarineMKTRIYTIYGQIYLLPYIKITHTRELNGDLELIVGWLKWEVVFGI*
Ga0063233_1000332063300003986Freshwater LakeMKIYEVYGQIYIFPFVKITHTRKLNGDLELIFGWLKWELAIRL*
Ga0007787_1000432133300004240Freshwater LakeMKFSICKIYGQVYFLPFIGMTHSRRLNGDIELIIGWLKWEIVIGI*
Ga0049081_1013355723300005581Freshwater LenticMKIYEVYGQIYIFPFVKITHTRKLNGDLELIFGWLKWEFAIRL*
Ga0049080_1004104853300005582Freshwater LenticMKLSISEVWGQVYLLPFIKFTHTRQLNGDLELIIGYLKWEIVIGI*
Ga0078894_1048264023300005662Freshwater LakeMKLSINEVWGQVYFLPFIKMTHTRQLNGDLELIIGYLKWEIVIGI*
Ga0078894_1103470833300005662Freshwater LakeMKLSINEVWGQVYLLPFIKFTHTRQLNGDIELIIGYLKWEIVIGI*
Ga0079957_100738363300005805LakeMKFSICKIYGQCYFLPFIGMTHSRRLNGDIELIIGWLKWEIVIGI*
Ga0075474_1014752523300006025AqueousMKITVSKSHEQVYLLPYVKVTHSRVLNGDLELIVGWLHLELVVGI*
Ga0098048_101823163300006752MarineMGKIMKITKYEVWGQIYLLPYIKLTHTRTLNGDLELIIGWLKWEITIGI*
Ga0102978_129561133300007177Freshwater LakeMKVTFCKVYGQFYLIPFIGITHTRKLNGDLELIIGWGKWEIVFGI*
Ga0070752_131783023300007345AqueousMRLSFVNIWGQLYLLPYIKVTHDKQLNGDLELIIGWL
Ga0099851_116137333300007538AqueousMKISKAEVWGQIYLLPYIKITHTRDLNGDLELIAGWLKWELVFSI*
Ga0099851_123237513300007538AqueousMKITVSKSHEQIYLLPYIKVTHTRLINGDLELIVGWLHLELVVGI*
Ga0099849_137342913300007539AqueousMKITVSKSHEQVYLLPYVKVTHSRVLNGDLELIIGW
Ga0099848_134716513300007541AqueousVGLMKISKAEVWGQIYLLPYIKITHTRDLNGNLELIAGWLKWELVFSI*
Ga0099846_119510223300007542AqueousMKVTVSKSHEQVYLLPYIKVTHTRLINGDLELIVGWLHLELVVGI*
Ga0102820_106942913300007554EstuarineMGKIMRVTYCEVWGQVYLLPYVKLTHTRTLNGDLELIIGWLKWEIIIGI*
Ga0102821_102185423300007557EstuarineMGKIMRVTYCEVWGQVYLLPYVKLTHTRTLNGDLELIIGWLKWEIVIGI*
Ga0102945_104751833300007609Pond WaterMKTTICRVWGQIYPLPYIKITHTRKLNGDLELIIGWFKWEIIIGL*
Ga0102901_119346823300007634EstuarineMKITINEVWGQVYFLPYIKMTHTRRLNGDIEFIIGYLKWEIVFGY*
Ga0102824_107050823300007681EstuarineEVWGQVYLLPYVKLTHTRTLNGDLELIIGWLKWEIVIGI*
Ga0099850_103982943300007960AqueousMKVIISEVFGQVYLLPYVKITHTRELNGDLELIIGWLFWEIGVGI*
Ga0114340_109554123300008107Freshwater, PlanktonMKISKAEVWGQIYLLPYIKITYTRDLNGDLELIAGWLKWELVFSI*
Ga0114340_110023423300008107Freshwater, PlanktonMKISKAEVWGQIYLLPYIKVTHTRDLNGDLELIFGWLKWELVFSI*
Ga0114340_112970823300008107Freshwater, PlanktonMKISKAEVWGQIYLLPYIKVTYTRDLNGNLELIVGWLKWELVFSI*
Ga0114341_1007975453300008108Freshwater, PlanktonMKLSINEIWGQVYLLPFIKLTHTRQLNGDLELIIGYLKWELVIGI*
Ga0114343_110197713300008110Freshwater, PlanktonMKLSINEVWGQVYFLPFIKFTHTRQLNGDIELIIGYLKWEIVIGI*
Ga0114346_103877163300008113Freshwater, PlanktonMKISINEVWGQVYFLPFIKLTHTRQLNGDLELIIGYLKWELVIGM*
Ga0114350_101551563300008116Freshwater, PlanktonMKIYEIYGQIYLFPFVKITHTKKLNGDLEFIIGWLKWELTIKL*
Ga0114350_104370543300008116Freshwater, PlanktonMKVTLCEVWGQIYFLPYIKMTHTRTLNGNLELIIGYLKWEVVIGV*
Ga0114355_104336433300008120Freshwater, PlanktonMKFSICKIYGQVYFLPFIGMTHSRRLNGDIELIIGWLKWEIV
Ga0114355_119555023300008120Freshwater, PlanktonCKIYGQVYFLPFIGMTHSRRLNGDIELIIGWLKWEIVIGI*
Ga0114876_106399023300008448Freshwater LakeMKLSINEIWGQVYFLPFIKLTHTRQLNGDLELIIGYLKWELVIGM*
Ga0114876_107974143300008448Freshwater LakeMKISKAEVWGQIYLLPYIKITHTRDLNGDLELIFGWLKWELVFTI*
Ga0114880_116944523300008450Freshwater LakeMRISKAEVWGQIYLLPYIKITYTRDLNGDLELIVGWLKWELVFSI*
Ga0105099_1015844633300009082Freshwater SedimentMKLSINEIWGQVYLLPFIKLTHTRDLNGDLELIIGYLKWELVIGI*
Ga0114995_10004634133300009172MarineMKSQIVSVWGQIYLFPYLKITHTRTLNGDLEIILGWLKWEWVIGI*
Ga0114994_1017165733300009420MarineMKSQIASVGGQIYLFPYLKITHTRILNGDLELIIGWLKWEWVIGI*
Ga0129348_130575933300010296Freshwater To Marine Saline GradientMIELCKVVGQIYILPYIKLTHSRILNGNLEFIIGWLKWE
Ga0129345_109087813300010297Freshwater To Marine Saline GradientMKTTKCTVYGQIYLLPYVKLTHNRMLNGDLELIIGWLKWELVIGI*
Ga0153799_100351773300012012FreshwaterMKIFEVYGQIYIFPFVKITHTRKLNGDLELIFGWLKWEFAIRL*
Ga0164293_10021078173300013004FreshwaterMRLSISEVWGQVYLLPFIKFTHTRQLNGDLELIIGYLKWEIVIGI*
(restricted) Ga0172365_1002930493300013127SedimentMKISKAEIWGQIYLLPYIKLTYTRDLNGDLELIFGWLKWELVFSI*
(restricted) Ga0172373_1049692033300013131FreshwaterQIYLLPYIKVTYTRDLNVDLELIFGWLKWELVFSI*
(restricted) Ga0172372_1095069123300013132FreshwaterMKISKAEVWGQIYLLPYIKVTYTRDLNVDLELIFGWLKWELVFSI*
(restricted) Ga0172362_10035604103300013133SedimentMVMKISKAEVWGQIYLLPYIKVTYTRDLNGDLELIFGWLKWELVFSI*
Ga0177922_1012462023300013372FreshwaterMKIFEVYGQIYIFPFVKITHTRKLNGDLELIFGWLKWELSIRL*
Ga0181350_110259723300017716Freshwater LakeMKIFEVYGQIYIFPFVKITHTRKLNGDLELIFGWLKWELAIRL
Ga0181356_103935443300017761Freshwater LakeMKISINEVWGQVYLLPFIKFTHTRQLNGDIELIIGYLKWEIVIGI
Ga0181343_105655233300017766Freshwater LakeMKLSINEVWGQVYLLPFIKFTHTRQLTGDLELIIGYLKWEIVIGI
Ga0181343_105887313300017766Freshwater LakeIQMKLSINEIWGQVYFLPFIKLTHTRQLNGDLELIIGYLKWELVIGM
Ga0181349_101060023300017778Freshwater LakeMKISISEVWGQVYLLPFIKFTHTRQLNGDIELIIGYLKWEIVIGI
Ga0181349_109843833300017778Freshwater LakeMKIAINEVWGQVYLLPFIKLTHTRQLNGDIELIIGYLKWELVIGM
Ga0181355_102861353300017785Freshwater LakeDTTFVIGGIDMKIYEVYGQIYIFPFVKITHTRKLNGDLELIFGWLKWELAIRL
Ga0169931_1083477923300017788FreshwaterMTTTLREVWGQVYFLPHLKMTHTRTLNGNLELIIGYLKWELV
Ga0181565_1003114873300017818Salt MarshMKTTKCTVYGQIYLLPYVKITHNRMLNGDLELIIGWLKWEIIFGW
Ga0181601_1020611733300018041Salt MarshMRLAFVNIWGQLYLLPYIKVTHDRQLNGDLEFIIGWLKWEMVIGY
Ga0181553_1037760823300018416Salt MarshMKISINEIWGQVYFLPFIKMTHTRQLNGDLELIIGYLKWEIVIGI
Ga0181567_1063597633300018418Salt MarshMKTTKCTVYGQIYLLPYVKITHNRMLNGDLELIIGWLKWE
Ga0181575_1028080413300020055Salt MarshSISSIWGQVYILPFIKLTHTRTLNGDLELIIGWLKWELIIGI
Ga0194113_1075273813300020074Freshwater LakeMKITLCEVWGQIYFLPYIKMTHTRTLNGNLELIIG
Ga0194110_1097092423300020084Freshwater LakeMGKIMKITLCEVWGQIYFLPYIKMTHTRTLNGNLELIIGYLKWELVIGI
Ga0194112_1052125113300020109Freshwater LakeMKITLCEVWGQIYFLPYIKMTHTRTLNGNLELIIGYLKWELVIG
Ga0194112_1072560523300020109Freshwater LakeKIMKITLCEVWGQIYFLPYIKMTHTRTLNGNLELIIGYLKWELVIGI
Ga0211735_1055772823300020162FreshwaterMEITKAKVWGQVYLFPYVKVTHTRELNGDLEIIVGWLKWQLIFGI
Ga0181556_102101313300020176Salt MarshMRISISSIWGQVYILPFIKLTHTRTLNGDLELIIGWLKWEL
Ga0181599_121774323300020178Salt MarshMRLAFVNIWGQLYLLPYIKVTHDRQLNGDLEIIIGWLKWEMIIGY
Ga0194115_1003226043300020183Freshwater LakeMKITLCEVWGQIYFLPYIKMTHTRTLNGNLELIIGYLKWELVIGI
Ga0181573_1041617633300020184Salt MarshMRISISSIWGQVYILPFIKLTHTRTLNGDLELIIGWL
Ga0208091_1000350183300020506FreshwaterMKLSINEVWGQVYLLPFIKFTHTRQLNGDLELIIGYLKWEIVIGI
Ga0208858_103007233300020524FreshwaterMKLSINEIWGQVYLLPFIKFTHTRQLNGDLELIIGYLKWEIVIGI
Ga0208855_101285033300020553FreshwaterVYGQIYIFPFVKITHTRKLNGDLELIIGWLKWELAIRL
Ga0208053_101950533300020575FreshwaterKIYIFPFVKITHTRKLNGDLELIIGWLKWELAISL
Ga0194126_1015793043300020603Freshwater LakeWGQIYFLPYIKMTHTRTLNGNLELIIGYLKWELVIGI
Ga0213867_118100423300021335SeawaterGQVYILPFIKLKHTRTLNGDLELIIGWLKWELIIGI
Ga0213858_1024970113300021356SeawaterMKTTKCTVYGQIYLLPYVKITHNRMLNGDLELIIGWLKWEIIFGI
Ga0222716_1014234923300021959Estuarine WaterMKITLSKIFGQVYLLPYVKITHTRELNGDLEVIIGYLKWEIALGL
Ga0222715_1009257813300021960Estuarine WaterKGGWGKGYFLPFIKMTHTRQLNGDLELIIGYLKWEIVIGI
Ga0222714_10000408193300021961Estuarine WaterMKFSICKIYGQVYFLPFIGMTHSRRLNGDIELIIGWLKWEIVIGI
Ga0222714_1002542623300021961Estuarine WaterMKISINEVWGQVYFLPFIKMTHTRQLNGDLELIIGYLKWEIVIGI
Ga0222714_1013646533300021961Estuarine WaterMKTTICKVWGQVYLLPYIKLTHTRKLNGDLELIIGWLKWEIIFGK
Ga0222714_1028333823300021961Estuarine WaterKFEICSIWGQVYFLPFIKITHTRTLNGDLELIIGWLKWELVIGI
Ga0222714_1046357313300021961Estuarine WaterMKVTFCEVWGQVYFLPYIKLTHTRKLNGDLELIIGWLKWEIVIGI
Ga0222713_1001011343300021962Estuarine WaterMKVTLCEVWGQIYFLPYIKMTHTRTLNGNLELIIGYLKWEVVIGV
Ga0222713_1014311143300021962Estuarine WaterMKTTICKVWGQVYLLPYIKLTHTRKLNGDLELIIGWGKWEIIFGI
Ga0222713_1076731923300021962Estuarine WaterEVWGQVYFLPYIKLTHTRKLNGDLELIIGWLKWEIVIGI
Ga0222713_1082150123300021962Estuarine WaterMRISKAEVWGQIYLLPYIKITYTRDLNGDLELIVGWVKWELVFSI
Ga0222712_1000070833300021963Estuarine WaterMKITLCEVWGQIYFLPYIKMTHTRTLNGNLELIIGYLKWEVVIGV
Ga0222712_1031252933300021963Estuarine WaterAYQIYVTPYIKITHSKFLNGDREFIIGWLKWELVISF
Ga0222712_1047931813300021963Estuarine WaterMKVSKAEVWGQIYLLPYIKITYTRDLNGDLELIVGWLKWELVFNI
Ga0181354_101794043300022190Freshwater LakeMKIYEVYGQIYIFPFVKITHTRKLNGDLELIFGWLKWELAIRL
Ga0196905_102706333300022198AqueousMKITVSKSHEQVYLLPYVKVTHSRVLNGDLELIVGWLHLELVVGI
Ga0181351_116460123300022407Freshwater LakeMKISKAEVWGQIYLLPYIKITHTRDLNGDLELIFGWLKWELVFTI
Ga0255753_103394513300022926Salt MarshVNIWGQLYLLPYIKVTHDRQLNGDLEFIIGWLKWEMVIGY
Ga0255752_1024300213300022929Salt MarshMIISISSIWGQVYILPFIKLTHTRTLNGDLELIIGWLK
Ga0255782_1009125743300023105Salt MarshVGLIMKTTKCTVYGQIYLLPYVKITHDRMLNGDLELIIGWLKWEIIFGW
Ga0255743_1028058543300023110Salt MarshMIISISSIWGQVYILPFIKLTHTRTLNGDLELIIGWL
Ga0244775_1000055893300024346EstuarineMRVTYCEVWGQVYLLPYVKLTHTRTLNGDLELIIGWLKWEIVIGI
Ga0255150_101267833300024505FreshwaterMKITLCEVWGQIYFLPYIKMTHTRTLNGNLELIIGYLK
Ga0255183_102307643300024515FreshwaterCEVWGQIYFLPYIKMTHTRTLNGNLELIIGYLKWEVVIGV
Ga0255276_109972613300024570FreshwaterKATFCKIYGQFYVLPFIGITHSRTLNGDLELIIGWGKWELVFGV
Ga0256340_109904923300024865FreshwaterMKATFCKIYGEFYVLPFIGITHSRTLNGDLELIIGWGKWELVFGV
Ga0208667_101424733300025070MarineMKITKYEVWGQIYLLPYIKLTHTRTLNGDLELIIGWLKWEITIGI
Ga0208303_106580713300025543AqueousMIELCKVVGQIYILPYIKLTHSRILNGNLEFIIGWLKWEI
Ga0208149_101778613300025610AqueousMIELCKVVGQIYILPYIKLTHSRILNGNLEFIIGWLKW
Ga0209198_119299023300025640Pelagic MarineQTYITPYIKITHNRDLNGYLEFIIGWLKWEIVIGI
Ga0208898_104226413300025671AqueousMRISISSIWGQVYILPFIKLTHTRTLNGDLELIIGWFKWE
Ga0209951_101602653300026138Pond WaterMKVTYCEVWGQIYLLPFIKLTHTRTLNGDLELIIGWLK
Ga0255132_102608243300027293FreshwaterGIDMKIYEVYGQIYIFPFVKITHTRKLNGDLELIFGWLKWELAIRL
Ga0209651_120776623300027581Freshwater LakeMKIYEVYGQIYIFPFVKITHTRKLNGDLELIFGWLKWE
Ga0255122_101858143300027595FreshwaterVYGQIYIFPFVKITHTRKLNGDLELIFGWLKWELAIRL
Ga0209709_10002170173300027779MarineMKSQIASVGGQIYLFPYLKITHTRILNGDLELIIGWLKWEWVIGI
Ga0209287_1015095043300027792Freshwater SedimentMKLSINEIWGQVYLLPFIKLTHTRDLNGDLELIIGYLKWELVIGI
Ga0209107_1024667113300027797Freshwater And SedimentFVIGGIDMKIYEVYGQIYIFPFVKITHTRKLNGDLELIFGWLKWEFAIRL
Ga0247723_108000523300028025Deep Subsurface SedimentMKIAINEIWGQVYFLPFIKLTHTRQLNGDLELIIGYLKWELVIGM
Ga0255172_103502433300028103FreshwaterEVWGQIYFLPYIKMTHTRTLNGNLELIIGYLKWEVVIGV
Ga0307928_1030528033300031227Saline WaterMKIGISSVWGQIYILPYIKLTHTRTLNGDLELIIGWL
Ga0307488_1001901173300031519Sackhole BrineMKLNYCKVWGQVYLFPYVKLTHTRTLNGDLELIIGWFKWEVVIGI
Ga0307488_1007630723300031519Sackhole BrineMKSQIVSVWGQMYLFPYLKITHTRTLNGDLELIVGWLKWEWVIGI
Ga0307380_1003292533300031539SoilMKLNYCKVWGQVYLFPYVKLTHTRFLNGDLELIIGWLKWEAVIGI
Ga0307376_1036660243300031578SoilMKISKAEVWGQIYLLPYIKITHTRDLNGNLELIFGWLKWELVF
Ga0307375_1045430723300031669SoilMKISKAEVWGQIYLLPYIKITHTRDLNGDLELIAGWLKWELVFSI
Ga0315291_1083094623300031707SedimentMKIFEVYGQIYIFPFVKITHTRKLNGDLELIFGWLKWELAISL
Ga0315907_1012896243300031758FreshwaterMKLSINEIWGQVYLLPFIKLTHTRQLNGDLELIIGYLKWELVIGI
Ga0315900_1029988653300031787FreshwaterMKISKAEVWGQIYLLPYIKVTHTRDLNGDLELIFGWLKWELVFSI
Ga0315909_10008939173300031857FreshwaterMKIYEIYGQIYLFPFVKITHTKKLNGDLEFIIGWLKWELTIKL
Ga0316625_10244100413300033418SoilMKIFEVYGQIYIFPFVKITNTRYLNGDLELIIGWL
Ga0334992_0003432_3476_36133300033992FreshwaterMRLSISEVWGQVYLLPFIKFTHTRQLNGDLELIIGYLKWEIVIGI
Ga0334987_0497251_2_1123300034061FreshwaterGQVYLLPFIKFTHTRQLNGDLELIIGYLKWEIVIGI
Ga0334995_0704979_40_1773300034062FreshwaterMKLSINEVWGQVYLLPFIKLTHTRQLNGDIELIIGYLKWELVIGI
Ga0310127_063227_298_4353300034072Fracking WaterMKLSINEVWGQVYFLPFIKLTYTRQLNGDLELIIGYLKWELVIGM
Ga0310130_0098673_445_5943300034073Fracking WaterMGKIIRIKVYDVWGQVYILPYIKLTHNRKLNGDLEFIIGWLKWELVIGI
Ga0335029_0697618_398_5353300034102FreshwaterMKLSINEVWGQVYLLPFIKLTHTRQLNGDIELIIGYLKWEIVIGI
Ga0335030_0238546_442_5793300034103FreshwaterMKVSINEVWGQVYLLPFIKLTHTRQLNGDIELIIGYLKWELVIGI
Ga0335036_0084028_1429_15663300034106FreshwaterMKLSINEVWGQVYLLPFIKLTHTRQLNGDLELIIGYLKWELVIGM
Ga0335007_0348615_3_1103300034283FreshwaterQVYLLPFIKLTHTRQLNGDIELIIGYLKWEIVIGI

 ⦗Top⦘


Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.