Metagenome / Metatranscriptome Family F052015

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F052015
Family Type	Metagenome / Metatranscriptome
Number of Sequences	143
Average Sequence Length	82 residues
Representative Sequence	MPRLATTEIYMIKKSAEGFIVSFRRGTDHGVRPGMQLAVLNEDGFRVGVVEVLASTETESEALVSGESGIKLGCLVSIPAA
Number of Associated Samples	89
Number of Associated Scaffolds	143

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	59.44 %
% of genes near scaffold ends (potentially truncated)	36.36 %
% of genes from short scaffolds (< 2000 bps)	82.52 %
Associated GOLD sequencing projects	69
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.40

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (96.503 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil (23.077 % of family members)
Environment Ontology (ENVO)	Unclassified (30.070 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (26.573 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 30.28% Coil/Unstructured: 69.72%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.40
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.40
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 143 Family Scaffolds
PF16222	DUF4881	11.19
PF00391	PEP-utilizers	6.29
PF01925	TauE	5.59
PF01326	PPDK_N	3.50
PF01564	Spermine_synth	1.40
PF00672	HAMP	0.70
PF03328	HpcH_HpaI	0.70
PF08388	GIIM	0.70
PF01053	Cys_Met_Meta_PP	0.70
PF13424	TPR_12	0.70
PF00899	ThiF	0.70
PF00528	BPD_transp_1	0.70

COG ID	Name	Functional Category	% Frequency in 143 Family Scaffolds
COG0730	Sulfite exporter TauE/SafE/YfcA and related permeases, UPF0721 family	Inorganic ion transport and metabolism [P]	5.59
COG0574	Phosphoenolpyruvate synthase/pyruvate phosphate dikinase	Carbohydrate transport and metabolism [G]	3.50
COG0075	Archaeal aspartate aminotransferase or a related aminotransferase, includes purine catabolism protein PucG	Amino acid transport and metabolism [E]	0.70
COG0156	7-keto-8-aminopelargonate synthetase or related enzyme	Coenzyme transport and metabolism [H]	0.70
COG0399	dTDP-4-amino-4,6-dideoxygalactose transaminase	Cell wall/membrane/envelope biogenesis [M]	0.70
COG0436	Aspartate/methionine/tyrosine aminotransferase	Amino acid transport and metabolism [E]	0.70
COG0469	Pyruvate kinase	Carbohydrate transport and metabolism [G]	0.70
COG0520	Selenocysteine lyase/Cysteine desulfurase	Amino acid transport and metabolism [E]	0.70
COG0626	Cystathionine beta-lyase/cystathionine gamma-synthase	Amino acid transport and metabolism [E]	0.70
COG1921	Seryl-tRNA(Sec) selenium transferase	Translation, ribosomal structure and biogenesis [J]	0.70
COG1982	Arginine/lysine/ornithine decarboxylase	Amino acid transport and metabolism [E]	0.70
COG2008	Threonine aldolase	Amino acid transport and metabolism [E]	0.70
COG2301	Citrate lyase beta subunit	Carbohydrate transport and metabolism [G]	0.70
COG2873	O-acetylhomoserine/O-acetylserine sulfhydrylase, pyridoxal phosphate-dependent	Amino acid transport and metabolism [E]	0.70
COG3836	2-keto-3-deoxy-L-rhamnonate aldolase RhmA	Carbohydrate transport and metabolism [G]	0.70
COG4100	Cystathionine beta-lyase family protein involved in aluminum resistance	Inorganic ion transport and metabolism [P]	0.70

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	96.50 %
Unclassified	root	N/A	3.50 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	96.50 %
Unclassified	root	N/A	3.50 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	96.50 %
Unclassified	root	N/A	3.50 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	95.10 %
Unclassified	root	N/A	3.50 %

Name	Rank	Taxonomy	Distribution
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	93.71 %
Unclassified	root	N/A	3.50 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	93.71 %
Unclassified	root	N/A	3.50 %

Name	Rank	Taxonomy	Distribution
Desulfovibrionales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfovibrionales	28.67 %
Unclassified	root	N/A	3.50 %
Desulfobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales	1.40 %

Name	Rank	Taxonomy	Distribution
Desulfovibrionaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfovibrionales → Desulfovibrionaceae	27.27 %
Unclassified	root	N/A	3.50 %
Desulfomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfovibrionales → Desulfomicrobiaceae	1.40 %
Desulfobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae	0.70 %

Name	Rank	Taxonomy	Distribution
Desulfovibrio	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfovibrionales → Desulfovibrionaceae → Desulfovibrio	23.78 %
Unclassified	root	N/A	3.50 %
Solidesulfovibrio	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfovibrionales → Desulfovibrionaceae → Solidesulfovibrio	2.80 %
unclassified Desulfomicrobiaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfovibrionales → Desulfomicrobiaceae → unclassified Desulfomicrobiaceae	1.40 %
Desulfatirhabdium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → Desulfatirhabdium	0.70 %

Name	Rank	Taxonomy	Distribution
Desulfovibrio	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfovibrionales → Desulfovibrionaceae → Desulfovibrio	23.78 %
Unclassified	root	N/A	3.50 %
Solidesulfovibrio magneticus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfovibrionales → Desulfovibrionaceae → Solidesulfovibrio → Solidesulfovibrio magneticus	2.10 %
Desulfomicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfovibrionales → Desulfomicrobiaceae → unclassified Desulfomicrobiaceae → Desulfomicrobiaceae bacterium	1.40 %
Solidesulfovibrio alcoholivorans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfovibrionales → Desulfovibrionaceae → Solidesulfovibrio → Solidesulfovibrio alcoholivorans	0.70 %
Desulfatirhabdium butyrativorans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → Desulfatirhabdium → Desulfatirhabdium butyrativorans	0.70 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000309\|WSSedA1BaDRAFT_1001635	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfovibrionales → Desulfovibrionaceae → Solidesulfovibrio → Solidesulfovibrio magneticus	4536	Open in IMG/M
3300000309\|WSSedA1BaDRAFT_1018347	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1137	Open in IMG/M
3300001213\|JGIcombinedJ13530_108184069	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfovibrionales → Desulfovibrionaceae → Desulfovibrio	793	Open in IMG/M
3300001213\|JGIcombinedJ13530_108185347	Not Available	793	Open in IMG/M
3300002961\|JGI11641J44799_10022575	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1881	Open in IMG/M
3300003154\|Ga0052186_10137223	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfovibrionales → Desulfovibrionaceae → Desulfovibrio	656	Open in IMG/M
3300003432\|JGI20214J51088_10018790	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfovibrionales → Desulfovibrionaceae → Desulfovibrio	4673	Open in IMG/M
3300003432\|JGI20214J51088_10099253	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfovibrionales → Desulfovibrionaceae → Desulfovibrio	2050	Open in IMG/M
3300003541\|JGI20214J51650_10104119	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfovibrionales → Desulfovibrionaceae → Desulfovibrio	1934	Open in IMG/M
3300003910\|JGI26437J51864_10036957	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1042	Open in IMG/M
3300004000\|Ga0055458_10111841	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	765	Open in IMG/M
3300004048\|Ga0055494_10058562	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	759	Open in IMG/M
3300004049\|Ga0055493_10071742	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfovibrionales → Desulfovibrionaceae → Desulfovibrio	697	Open in IMG/M
3300004057\|Ga0055496_10071593	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfovibrionales → Desulfovibrionaceae → Desulfovibrio	779	Open in IMG/M
3300004066\|Ga0055484_10122961	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	660	Open in IMG/M
3300004146\|Ga0055495_10036946	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfovibrionales → Desulfovibrionaceae → Desulfovibrio	963	Open in IMG/M
3300004155\|Ga0066600_10065782	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1328	Open in IMG/M
3300004282\|Ga0066599_100098008	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1375	Open in IMG/M
3300005263\|Ga0071346_1284339	Not Available	775	Open in IMG/M
3300005830\|Ga0074473_10190556	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfovibrionales → Desulfovibrionaceae → Desulfovibrio	1592	Open in IMG/M
3300005833\|Ga0074472_10245209	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfovibrionales → Desulfovibrionaceae → Desulfovibrio	1737	Open in IMG/M
3300006224\|Ga0079037_101196397	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfovibrionales → Desulfovibrionaceae → Desulfovibrio	756	Open in IMG/M
3300006224\|Ga0079037_101629244	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	645	Open in IMG/M
3300006930\|Ga0079303_10003457	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfovibrionales → Desulfovibrionaceae → Desulfovibrio	4275	Open in IMG/M
3300006930\|Ga0079303_10010429	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfovibrionales → Desulfovibrionaceae → Desulfovibrio	2774	Open in IMG/M
3300006930\|Ga0079303_10067015	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1300	Open in IMG/M
3300009009\|Ga0105105_10001042	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	11932	Open in IMG/M
3300009009\|Ga0105105_10010525	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	3709	Open in IMG/M
3300009009\|Ga0105105_10419413	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	750	Open in IMG/M
3300009037\|Ga0105093_10000054	All Organisms → cellular organisms → Bacteria → Proteobacteria	40470	Open in IMG/M
3300009037\|Ga0105093_10787967	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfovibrionales → Desulfovibrionaceae → Solidesulfovibrio → Solidesulfovibrio alcoholivorans	551	Open in IMG/M
3300009075\|Ga0105090_10310634	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	965	Open in IMG/M
3300009075\|Ga0105090_10318419	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	952	Open in IMG/M
3300009075\|Ga0105090_10343044	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfovibrionales → Desulfovibrionaceae → Desulfovibrio	912	Open in IMG/M
3300009081\|Ga0105098_10442693	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	652	Open in IMG/M
3300009085\|Ga0105103_10127746	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1335	Open in IMG/M
3300009091\|Ga0102851_10188707	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1919	Open in IMG/M
3300009091\|Ga0102851_10396052	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfovibrionales → Desulfovibrionaceae → Desulfovibrio	1388	Open in IMG/M
3300009091\|Ga0102851_10472712	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1282	Open in IMG/M
3300009091\|Ga0102851_10830300	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfovibrionales → Desulfomicrobiaceae → unclassified Desulfomicrobiaceae → Desulfomicrobiaceae bacterium	991	Open in IMG/M
3300009091\|Ga0102851_13245530	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	522	Open in IMG/M
3300009091\|Ga0102851_13514887	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	503	Open in IMG/M
3300009111\|Ga0115026_10209023	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfovibrionales → Desulfovibrionaceae	1309	Open in IMG/M
3300009111\|Ga0115026_10457741	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfovibrionales → Desulfovibrionaceae → Desulfovibrio	938	Open in IMG/M
3300009111\|Ga0115026_10490354	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	911	Open in IMG/M
3300009111\|Ga0115026_10828606	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	726	Open in IMG/M
3300009131\|Ga0115027_10042607	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2263	Open in IMG/M
3300009131\|Ga0115027_10092276	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1716	Open in IMG/M
3300009131\|Ga0115027_10103443	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1643	Open in IMG/M
3300009131\|Ga0115027_10483475	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	887	Open in IMG/M
3300009131\|Ga0115027_10695241	Not Available	762	Open in IMG/M
3300009131\|Ga0115027_10992690	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	657	Open in IMG/M
3300009167\|Ga0113563_10446571	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1394	Open in IMG/M
3300009167\|Ga0113563_11002489	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	961	Open in IMG/M
3300009167\|Ga0113563_11356281	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	833	Open in IMG/M
3300009167\|Ga0113563_12284865	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	650	Open in IMG/M
3300009167\|Ga0113563_12665462	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	604	Open in IMG/M
3300009169\|Ga0105097_10298097	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	891	Open in IMG/M
3300009169\|Ga0105097_10610855	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	614	Open in IMG/M
3300009170\|Ga0105096_10316948	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	797	Open in IMG/M
3300009430\|Ga0114938_1001694	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	14718	Open in IMG/M
3300009430\|Ga0114938_1329383	Not Available	555	Open in IMG/M
3300009455\|Ga0114939_10205328	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	834	Open in IMG/M
3300010412\|Ga0136852_10264101	Not Available	1703	Open in IMG/M
3300014258\|Ga0075315_1100032	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	551	Open in IMG/M
3300014305\|Ga0075349_1001616	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → Desulfatirhabdium → Desulfatirhabdium butyrativorans	3436	Open in IMG/M
3300014307\|Ga0075304_1110578	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	633	Open in IMG/M
3300014315\|Ga0075350_1040835	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	965	Open in IMG/M
3300014319\|Ga0075348_1002269	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfovibrionales → Desulfovibrionaceae → Desulfovibrio	3270	Open in IMG/M
3300014320\|Ga0075342_1139847	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	654	Open in IMG/M
3300014321\|Ga0075353_1002343	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfovibrionales → Desulfovibrionaceae → Desulfovibrio	2554	Open in IMG/M
3300014324\|Ga0075352_1033052	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1149	Open in IMG/M
3300017947\|Ga0187785_10326085	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	714	Open in IMG/M
3300024056\|Ga0124853_1023760	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfovibrionales → Desulfovibrionaceae → Desulfovibrio	920	Open in IMG/M
3300024056\|Ga0124853_1026107	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfovibrionales → Desulfovibrionaceae → Desulfovibrio	1243	Open in IMG/M
3300024056\|Ga0124853_1136135	All Organisms → cellular organisms → Bacteria	1944	Open in IMG/M
3300025106\|Ga0209398_1001867	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfovibrionales → Desulfovibrionaceae → Solidesulfovibrio → Solidesulfovibrio magneticus	10270	Open in IMG/M
3300025550\|Ga0210098_1047162	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	695	Open in IMG/M
3300025956\|Ga0210104_1003188	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2011	Open in IMG/M
3300025964\|Ga0210127_1000158	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfovibrionales → Desulfovibrionaceae → Solidesulfovibrio → Solidesulfovibrio magneticus	9760	Open in IMG/M
3300025966\|Ga0210105_1076679	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	513	Open in IMG/M
3300026048\|Ga0208915_1028160	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	527	Open in IMG/M
3300026059\|Ga0208540_1036191	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	567	Open in IMG/M
3300026349\|Ga0256811_1003698	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1242	Open in IMG/M
3300026350\|Ga0256823_1002805	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfovibrionales → Desulfovibrionaceae → Desulfovibrio	1245	Open in IMG/M
3300026477\|Ga0256807_1102816	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	500	Open in IMG/M
3300026501\|Ga0256806_1004325	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2061	Open in IMG/M
3300026501\|Ga0256806_1018206	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1177	Open in IMG/M
3300027715\|Ga0208665_10034031	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1430	Open in IMG/M
3300027721\|Ga0209492_1026115	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2018	Open in IMG/M
3300027726\|Ga0209285_10000503	All Organisms → cellular organisms → Bacteria → Proteobacteria	13254	Open in IMG/M
3300027800\|Ga0209800_10392133	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	571	Open in IMG/M
3300027841\|Ga0209262_10036090	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2173	Open in IMG/M
3300027871\|Ga0209397_10043780	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1623	Open in IMG/M
3300027871\|Ga0209397_10151368	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1031	Open in IMG/M
3300027871\|Ga0209397_10310641	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfovibrionales → Desulfovibrionaceae → Desulfovibrio	756	Open in IMG/M
3300027871\|Ga0209397_10311709	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	755	Open in IMG/M
3300027871\|Ga0209397_10353025	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfovibrionales → Desulfovibrionaceae → Desulfovibrio	712	Open in IMG/M
3300027871\|Ga0209397_10377664	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfovibrionales → Desulfovibrionaceae → Desulfovibrio	690	Open in IMG/M
3300027877\|Ga0209293_10066390	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1539	Open in IMG/M
3300027885\|Ga0209450_10000818	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	15608	Open in IMG/M
3300027885\|Ga0209450_10489366	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	900	Open in IMG/M
3300027887\|Ga0208980_10419836	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	770	Open in IMG/M
3300027890\|Ga0209496_10034074	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfovibrionales → Desulfovibrionaceae → Desulfovibrio	1794	Open in IMG/M
3300027899\|Ga0209668_10125915	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1525	Open in IMG/M
3300027972\|Ga0209079_10083158	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1090	Open in IMG/M
3300027975\|Ga0209391_10361452	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	564	Open in IMG/M
3300032263\|Ga0316195_10581812	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	598	Open in IMG/M
3300033004\|Ga0335084_10082928	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales	3325	Open in IMG/M
3300033004\|Ga0335084_10998227	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	843	Open in IMG/M
3300033406\|Ga0316604_10840301	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	504	Open in IMG/M
3300033408\|Ga0316605_10189401	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1718	Open in IMG/M
3300033408\|Ga0316605_10246763	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfovibrionales → Desulfovibrionaceae → Desulfovibrio	1534	Open in IMG/M
3300033408\|Ga0316605_11178288	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	739	Open in IMG/M
3300033408\|Ga0316605_12128951	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	546	Open in IMG/M
3300033408\|Ga0316605_12147884	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	543	Open in IMG/M
3300033413\|Ga0316603_10104886	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2243	Open in IMG/M
3300033413\|Ga0316603_10406609	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfovibrionales → Desulfovibrionaceae → Desulfovibrio	1231	Open in IMG/M
3300033413\|Ga0316603_10495315	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1121	Open in IMG/M
3300033413\|Ga0316603_10809680	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	880	Open in IMG/M
3300033414\|Ga0316619_10506467	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfovibrionales → Desulfovibrionaceae → Desulfovibrio	984	Open in IMG/M
3300033416\|Ga0316622_100173997	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfovibrionales → Desulfovibrionaceae → Desulfovibrio	2269	Open in IMG/M
3300033418\|Ga0316625_100371878	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1062	Open in IMG/M
3300033418\|Ga0316625_101122592	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	712	Open in IMG/M
3300033419\|Ga0316601_100442976	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1233	Open in IMG/M
3300033481\|Ga0316600_10776030	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	675	Open in IMG/M
3300033482\|Ga0316627_100137738	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfovibrionales → Desulfovibrionaceae → Desulfovibrio	1767	Open in IMG/M
3300033482\|Ga0316627_100230493	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1457	Open in IMG/M
3300033482\|Ga0316627_101068966	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	788	Open in IMG/M
3300033482\|Ga0316627_101554768	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	671	Open in IMG/M
3300033483\|Ga0316629_11772729	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	509	Open in IMG/M
3300033486\|Ga0316624_11825443	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	563	Open in IMG/M
3300033487\|Ga0316630_10342529	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfovibrionales → Desulfovibrionaceae → Desulfovibrio	1170	Open in IMG/M
3300033488\|Ga0316621_10554739	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	811	Open in IMG/M
3300033493\|Ga0316631_10164443	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfovibrionales → Desulfovibrionaceae → Desulfovibrio	833	Open in IMG/M
3300033513\|Ga0316628_100001030	All Organisms → cellular organisms → Bacteria	19020	Open in IMG/M
3300033513\|Ga0316628_100696468	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfovibrionales → Desulfovibrionaceae → Desulfovibrio	1333	Open in IMG/M
3300033513\|Ga0316628_102506798	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	681	Open in IMG/M
3300033521\|Ga0316616_102770248	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	660	Open in IMG/M
3300033557\|Ga0316617_100341308	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1291	Open in IMG/M
3300033557\|Ga0316617_100748247	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfovibrionales → Desulfovibrionaceae → Desulfovibrio	929	Open in IMG/M
3300034156\|Ga0370502_0078523	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfovibrionales → Desulfomicrobiaceae → unclassified Desulfomicrobiaceae → Desulfomicrobiaceae bacterium	1045	Open in IMG/M
3300034169\|Ga0370480_0215244	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	650	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.30%
Engineered	Engineered	0.70%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	64.34%
Terrestrial	Environmental → Terrestrial	34.97%
Bioreactor	Engineered → Bioreactor	0.70%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	48.25%
Soil	Environmental → Terrestrial → Soil	32.17%
Marine	Environmental → Aquatic → Marine	13.99%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface	2.80%
Sediment	Environmental → Aquatic → Sediment	2.10%
Unclassified	Engineered → Bioreactor → Unclassified	0.70%

Habitat	Taxonomy	Distribution
Wetlands	Environmental → Terrestrial → Soil → Wetlands	32.17%
Sediment	Environmental → Aquatic → Freshwater → Sediment	25.17%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	14.69%
Wetlands	Environmental → Aquatic → Marine → Wetlands	13.29%
Lentic	Environmental → Aquatic → Freshwater → Lentic	2.80%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	2.80%
Pond	Environmental → Aquatic → Freshwater → Pond	2.80%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified	2.80%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.10%
Coastal	Environmental → Aquatic → Marine → Coastal	0.70%
Unclassified	Engineered → Bioreactor → Unclassified → Unclassified	0.70%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	32.17%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	25.17%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	11.19%
Sediment	Environmental → Aquatic → Marine → Wetlands → Sediment	6.29%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	6.99%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	3.50%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	2.80%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	2.80%
Sediment	Environmental → Aquatic → Freshwater → Pond → Sediment	2.80%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified	2.80%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.10%
Sediment	Environmental → Aquatic → Marine → Coastal → Sediment	0.70%
Unclassified	Engineered → Bioreactor → Unclassified → Unclassified → Unclassified	0.70%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	23.08%
Wetland	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Wetland	12.59%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	11.89%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	11.19%
Wetland	Environmental → Aquatic → Marine → Wetlands → Sediment → Wetland	6.29%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	6.99%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	6.99%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Sediment	3.50%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	2.80%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Groundwater	2.80%
Freshwater	Environmental → Aquatic → Freshwater → Pond → Sediment → Freshwater	2.80%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface	2.80%
Sediment (Intertidal)	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)	1.40%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	1.40%
Anaerobic Enrichment Culture	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Anaerobic Enrichment Culture	0.70%
Sediment	Environmental → Aquatic → Marine → Coastal → Sediment → Sediment	0.70%
Mangrove Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Mangrove Sediment	0.70%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.70%
Bioreactor	Engineered → Bioreactor → Unclassified → Unclassified → Unclassified → Bioreactor	0.70%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000309	Wetland microbial communities from Twitchell Island in the Sacramento Delta, sample from surface sediment Feb2011 Site A1 Bulk	Environmental	Open in IMG/M
3300001213	Combined assembly of wetland microbial communities from Twitchell Island in the Sacramento Delta (Jan 2013 JGI Velvet Assembly)	Environmental	Open in IMG/M
3300002961	Wetland microbial communities from Twitchell Island in the Sacramento Delta, sample from surface sediment Feb2011 Site A1 Bulk	Environmental	Open in IMG/M
3300003154	Anode biofilm microbial communities from J. Craig Venter Institute, USA, in microbial fuel cells	Engineered	Open in IMG/M
3300003432	Wetland sediment microbial communities from Twitchell Island in the Sacramento Delta, sample from surface sediment Aug2011 Site B2 Bulk	Environmental	Open in IMG/M
3300003541	Wetland sediment microbial communities from Twitchell Island in the Sacramento Delta, sample from surface sediment Aug2011 Site B2 Bulk	Environmental	Open in IMG/M
3300003910	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - LWP11 LW	Environmental	Open in IMG/M
3300004000	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Joice_CattailNLB_D2	Environmental	Open in IMG/M
3300004048	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushSE_TuleA_D2	Environmental	Open in IMG/M
3300004049	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushSE_CattailNLC_D2	Environmental	Open in IMG/M
3300004057	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushSE_TuleC_D2	Environmental	Open in IMG/M
3300004066	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushMan_CattailNLC_D2	Environmental	Open in IMG/M
3300004146	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushSE_TuleB_D2	Environmental	Open in IMG/M
3300004155	Freshwater pond sediment microbial communities from the University of Edinburgh, under environmental carbon perturbations - Low cellulose week 11	Environmental	Open in IMG/M
3300004282	Freshwater pond sediment microbial communities from the University of Edinburgh, under environmental carbon perturbations - Initial sediment	Environmental	Open in IMG/M
3300005263	Freshwater pond sediment microbial communities from Middleton WI, enriched with Humic Acid Only under anaerobic conditions - HA Sample 3	Environmental	Open in IMG/M
3300005830	Microbial communities from Youngs Bay mouth sediment, Columbia River estuary, Oregon - S.178_YBM	Environmental	Open in IMG/M
3300005833	Microbial communities from Cathlamet Bay sediment, Columbia River estuary, Oregon - S.174_CBK	Environmental	Open in IMG/M
3300006224	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 4 metaG	Environmental	Open in IMG/M
3300006930	Deep subsurface shale carbon reservoir microbial communities from Ohio, USA - Methanogen_OWC	Environmental	Open in IMG/M
3300009009	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 1-3cm September2015	Environmental	Open in IMG/M
3300009037	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 1-3cm March2015	Environmental	Open in IMG/M
3300009075	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 1-3cm March2015	Environmental	Open in IMG/M
3300009081	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm May2015	Environmental	Open in IMG/M
3300009085	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 10-12cm September2015	Environmental	Open in IMG/M
3300009091	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300009111	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Mud_0915_D1	Environmental	Open in IMG/M
3300009131	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Open_0915_D1	Environmental	Open in IMG/M
3300009167	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG - Illumina Assembly (version 2)	Environmental	Open in IMG/M
3300009169	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 10-12cm May2015	Environmental	Open in IMG/M
3300009170	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 1-3cm May2015	Environmental	Open in IMG/M
3300009430	Groundwater microbial communities from Big Spring, Nevada to study Microbial Dark Matter (Phase II) - Ash Meadows Big Spring	Environmental	Open in IMG/M
3300009455	Groundwater microbial communities from Big Spring, Nevada to study Microbial Dark Matter (Phase II) - Ash Meadows Crystal Spring	Environmental	Open in IMG/M
3300010412	Mangrove sediment microbial communities from Mai Po Nature Reserve Marshes in Hong Kong, China - Maipo_10	Environmental	Open in IMG/M
3300014258	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_TuleA_D1	Environmental	Open in IMG/M
3300014305	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushSE_TuleB_D1	Environmental	Open in IMG/M
3300014307	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Joice_CattailNLA_D1	Environmental	Open in IMG/M
3300014315	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushSE_TuleC_D1	Environmental	Open in IMG/M
3300014319	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushSE_TuleA_D1	Environmental	Open in IMG/M
3300014320	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushOxbow_ThreeSqA_D1	Environmental	Open in IMG/M
3300014321	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_TuleB_D1	Environmental	Open in IMG/M
3300014324	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_TuleA_D1	Environmental	Open in IMG/M
3300017947	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_4_20_MG	Environmental	Open in IMG/M
3300024056	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG (PacBio error correction)	Environmental	Open in IMG/M
3300025106	Groundwater microbial communities from Big Spring, Nevada to study Microbial Dark Matter (Phase II) - Ash Meadows Big Spring (SPAdes)	Environmental	Open in IMG/M
3300025550	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Joice_ThreeSqA_D1 (SPAdes)	Environmental	Open in IMG/M
3300025956	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushSE_TuleA_D2 (SPAdes)	Environmental	Open in IMG/M
3300025964	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushSE_CattailNLC_D2 (SPAdes)	Environmental	Open in IMG/M
3300025966	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushSE_TuleC_D2 (SPAdes)	Environmental	Open in IMG/M
3300026048	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_TuleB_D1 (SPAdes)	Environmental	Open in IMG/M
3300026059	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushSE_TuleA_D1 (SPAdes)	Environmental	Open in IMG/M
3300026349	Sediment microbial communities from tidal freshwater marsh on Altamaha River, Georgia, United States - 10-16 PU6	Environmental	Open in IMG/M
3300026350	Sediment microbial communities from tidal freshwater marsh on Altamaha River, Georgia, United States - 7-17 PU6	Environmental	Open in IMG/M
3300026477	Sediment microbial communities from tidal freshwater marsh on Altamaha River, Georgia, United States - 10-16 PR5	Environmental	Open in IMG/M
3300026501	Sediment microbial communities from tidal freshwater marsh on Altamaha River, Georgia, United States - 10-16 PR4	Environmental	Open in IMG/M
3300027715	Deep subsurface shale carbon reservoir microbial communities from Ohio, USA - Methanogen_OWC (SPAdes)	Environmental	Open in IMG/M
3300027721	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 10-12cm May2015 (SPAdes)	Environmental	Open in IMG/M
3300027726	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 1-3cm March2015 (SPAdes)	Environmental	Open in IMG/M
3300027800	Freshwater pond sediment microbial communities from the University of Edinburgh, under environmental carbon perturbations - High cellulose week 8 (SPAdes)	Environmental	Open in IMG/M
3300027841	Freshwater pond sediment microbial communities from the University of Edinburgh, under environmental carbon perturbations - Low cellulose week 11 (SPAdes)	Environmental	Open in IMG/M
3300027871	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Open_0915_D1 (SPAdes)	Environmental	Open in IMG/M
3300027877	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Mud_0915_D1 (SPAdes)	Environmental	Open in IMG/M
3300027885	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - LWP11 LW (SPAdes)	Environmental	Open in IMG/M
3300027887	Wetland microbial communities from Twitchell Island in the Sacramento Delta, sample from surface sediment Aug2011 Site A1 Bulk	Environmental	Open in IMG/M
3300027890	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Plant_0915_D1 (SPAdes)	Environmental	Open in IMG/M
3300027899	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - PLP11 PL (SPAdes)	Environmental	Open in IMG/M
3300027972	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 10-12cm September2015 (SPAdes)	Environmental	Open in IMG/M
3300027975	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 1-3cm March2015 (SPAdes)	Environmental	Open in IMG/M
3300032263	Coastal sediment microbial communities from Maine, United States - Phippsburg sediment 1	Environmental	Open in IMG/M
3300033004	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4	Environmental	Open in IMG/M
3300033406	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day20_CT	Environmental	Open in IMG/M
3300033408	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day20_noCT	Environmental	Open in IMG/M
3300033413	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day10_noCT	Environmental	Open in IMG/M
3300033414	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D4_B	Environmental	Open in IMG/M
3300033416	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_OW2_C1_D5_C	Environmental	Open in IMG/M
3300033418	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_T1_C1_D1_A	Environmental	Open in IMG/M
3300033419	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day5_noCT	Environmental	Open in IMG/M
3300033481	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day5_CT	Environmental	Open in IMG/M
3300033482	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D1_C	Environmental	Open in IMG/M
3300033483	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_May_M1_C1_D1_A	Environmental	Open in IMG/M
3300033486	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_N3_C1_D5_A	Environmental	Open in IMG/M
3300033487	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_May_M1_C1_D6_A	Environmental	Open in IMG/M
3300033488	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_OW2_C1_D1_C	Environmental	Open in IMG/M
3300033493	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_May_M1_C1_D3_A	Environmental	Open in IMG/M
3300033513	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D5_C	Environmental	Open in IMG/M
3300033521	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D1_B	Environmental	Open in IMG/M
3300033557	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D2_B	Environmental	Open in IMG/M
3300034156	Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_01D_18	Environmental	Open in IMG/M
3300034169	Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_02D_15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
WSSedA1BaDRAFT_10016355	3300000309	Wetland	VPERRSWTFYEVVNEAEQAMAKDGPIEIYMIKKSAEGFIVSFRLGTDQGVTPGMDLVVLNEDGFQVGNVTVLSSTETESEALVAGESGIKLGCRVSLPAAARGV*
WSSedA1BaDRAFT_10183472	3300000309	Wetland	TTEIYMIKKSAEGFIVSFRRGTDHGVRPGMQLAVLNEDGFGVGIVEVLASTETESEALVSGESGIKLGCLVSVPAG*
JGIcombinedJ13530_1081840691	3300001213	Wetland	MPRHDVTEIYMIKKSAEGFIVSFRRGTDHGVRPGMQLAVVNEDGFRVGLVEVLASTETDSEALVSGESGIKLGCLVSIPQP
JGIcombinedJ13530_1081853472	3300001213	Wetland	MPRQDASAIYMIKKSAEGSIVSFRRGTDHGVRPGMQLTVVNEDGFRVGVVDVLKSTETESDALVSGESNIKLGCLVSMPN*
JGI11641J44799_100225752	3300002961	Wetland	MPRLDTTEIYMIKKSAEGFIVSFRRGTDHGVRPGMQLAVLNEDGFGVGIVEVLASTETESEALVSGESGIKLGCLVSVPAG*
Ga0052186_101372232	3300003154	Bioreactor	MPRHDTTEIYMIKKSAEGFIVSFRRGTDHGIRPGMQLTVLNEDGIRVGGVEVLTSTETESEALVSGESGIKLGCRVSIPPAAAPG*
JGI20214J51088_100187904	3300003432	Wetland	MIKKSAGGLLVSFRLGTGEGVRPGMTLAVVNEDGLRVGVVEVVSSTETESNALALDEGGVKLGCHVRVPAQG*
JGI20214J51088_100992534	3300003432	Wetland	MIKKSADGLXVSFRLGTGEGVRPGMTLAVVNEDGXRVGVVEVVSSTETESNALAFDERGVKLGCHVRMPEGG*
JGI20214J51650_101041191	3300003541	Wetland	MIKKSADGLLVSFRLGTGEGVRPGMTLAVVNEDGLRVGVVEVVSSTETESNALAFDERGVKLGCHV
JGI26437J51864_100369572	3300003910	Freshwater Lake Sediment	MPRLDTTEIYMIKKSAEGFIVSFRRGTDHGVRPGMQLAVLNEDGFGVGIVEVLASTETESEALVSSESGIKLGCLVSVPAG*
Ga0055458_101118412	3300004000	Natural And Restored Wetlands	RTSAGCGPLMMERFMPRLDTTEIYMIKKSAEGFIVSFQRGTDHGVRPGMQLAVLNEDGFRVGVVEVLASTESESEALVSGESGIKLGCLVSLPAA*
Ga0055494_100585621	3300004048	Natural And Restored Wetlands	MPRLDTTEIYMIKKSAEGFIVSFQRGTDHGVRPGMQLAVLNEDGFRVGVVEVLASTESESEALVSGESGIKLGCLVSLPAA*
Ga0055493_100717422	3300004049	Natural And Restored Wetlands	MHRLDTTEIYMIKKSAEGFIVSFRRGTDHGVRPGMQLAVLNEDGFRVGVVEVLASTEAESEALVSGESGIKLGCLVSIPAV*
Ga0055496_100715931	3300004057	Natural And Restored Wetlands	MHRLDTTEIYMIKKSAEGFIVSFRRGTDHGVRPGMQLAVLNEDGFRVGVVEVLASTEAESEALVSGESGIKLGCLVSIPTV*
Ga0055484_101229612	3300004066	Natural And Restored Wetlands	MMERFMPRLDTTEIYMIKKSAEGFIVSFQRGTDHGVRPGMQLAVLNEDGFRVGVVEVLASTESESEALVSGESGIKLGCLVSLPAA*
Ga0055495_100369461	3300004146	Natural And Restored Wetlands	MHRLDTTEIYMIKKSAEGFIVSFRRGTDHGVRPGMQLAVLNEDGFRVGVVEVLASTEAESEALVSGESGIKLGCLVSIP
Ga0066600_100657822	3300004155	Freshwater	MSGPQSSAIYMIKKSAAGLLVSFRLGTGEGVRPGMTLAVVNEDGLRVGVVEVVSSTATESNALAFDERGVKLGCHVRVPAGG*
Ga0066599_1000980082	3300004282	Freshwater	SAEGFIVSFRRGTDHGVRPGMQLAVLNEDGFGVGIVEVLASTETESEALVSGESGIKLGCLVSVPAG*
Ga0071346_12843393	3300005263	Anaerobic Enrichment Culture	LLVSFRLGTGEGVRPGMTLAVVNEDGLRVGVVEVVSSTETESNALAFDERGVKLGCHVRMPEGG*
Ga0074473_101905562	3300005830	Sediment (Intertidal)	MHRLDTTEIYMIKKSAEGFIVSFRRGTDHGVRPGMQLAVLNEDGFRVGVVEVLASTEAESEALVSGESGIKLGCLVSIPKV*
Ga0074472_102452091	3300005833	Sediment (Intertidal)	MPRHDTTEIYMIKKSAEGFIVSFRRGTNHGIRPGMQLAVVNEDGFRVGVVEVLGSTESESEALVSGESGIKLGCLV
Ga0079037_1011963973	3300006224	Freshwater Wetlands	MPRLATTEIYMIKKSAEGFIVSFRRGTDHGVRPGMQLAVLNEDGFRVGVVEVLASTETESEALVSGES
Ga0079037_1016292442	3300006224	Freshwater Wetlands	EIYMIKKSAEGFIVSFRRGTDHGVRPGMQLAVLNEDGFGVGIVEVLASTETESEALVSGESGIKLGCLVSVPAG*
Ga0079303_100034573	3300006930	Deep Subsurface	MPRLATTEIYMIKKSAEGFIVSFRRGTDHGVRPGMQLAVLNEDGFRVGVVEVLASTETESEALVSGESGIKLGCLVSIPAA*
Ga0079303_100104293	3300006930	Deep Subsurface	MPRRDTTEIYMIKKSTEGFIVSFRRGTDHGVRPGMQLAVVNEDGFRVGVVEVRASTETESEALVSGESGIKLGCLVSIPAPASSS*
Ga0079303_100670152	3300006930	Deep Subsurface	MPRHDATEIYMIKKSAEGFIVSFRRGTDHGVRPGMQLAVLNEDGFGVGIVEVLASTETESEALVSGESGIKLGCLVSVPAG*
Ga0105105_1000104212	3300009009	Freshwater Sediment	MPRHDTTEIYMIKKSAEGFIVSFRRGTDHGVRPGMQLAVLNEDGFRVGVVEVLASTDTESEALVSGESSIKLGCLVSIPAA*
Ga0105105_100105253	3300009009	Freshwater Sediment	MPRLDTSEIYMIKKSAEGFIVSFRRGTDHGVRPGMQLAVLNEDGFQVGVVEVLASTETESEALVSGESGIKLGCLVSTPAA*
Ga0105105_104194132	3300009009	Freshwater Sediment	MDRKSTSEIYMIKKSAEGFIVSFRMGTRHGVEPGMDLAVLNEDGFSVGTVQVLSSTETESDALVAGESAIKLGCRVSLSGAPEAF*
Ga0105093_1000005437	3300009037	Freshwater Sediment	MPRHDTTEIYMIKKSAEGFIVSFRRGTDHGVRPGMQLAVLNEDGFRVGFVEVLASTDTESEALVSGESSIKLGCLVSIPAA*
Ga0105093_107879671	3300009037	Freshwater Sediment	MDRKSTSEIYMIKKSAEGFIVSFRMGTRHGVEPGMDLAVLNEDGFSVGTVQVLSSTENESDALVAGESAIKLGCRVSLSGAPKDS*
Ga0105090_103106342	3300009075	Freshwater Sediment	MSSAAPSAIYMIKKSADGLRVSFRLGAKDDVRPGMRLAVMNEDGFRVGTVEVVATTETESTALVVDGREVKLGCLVRATPHG*
Ga0105090_103184192	3300009075	Freshwater Sediment	VIGRCPALVKEQLMPRQDASAIYMIKKSAEGSIVSFRRGTDHGLRPGMQLTVVNEDGFRVGVVDVIVSSETESEALVSGESGVKLGCLVSVPAP*
Ga0105090_103430443	3300009075	Freshwater Sediment	VIERCTALTEEPFMPRNDATEIYMIKKSTEGFVVSFRRGTDQGIRPGMKLTVVNEDGFRVGVVEVLTSTETESEALVSGESGIKLGCLVSLPTA*
Ga0105098_104426931	3300009081	Freshwater Sediment	PEPSRPSAGCGLSITERFMPRLDTSEIYMIKKSAEGFIVSFRRGTDHGVRPGMQLAVLNEDGFRMGVVEVLASTETESEALVSGESGIKLGCLVSTPAA*
Ga0105103_101277462	3300009085	Freshwater Sediment	MERFMPRLATTEIYMIKKSAEGFIVSFRRGTDHGVRPGMQLAVLNEDGFQVGVVEVLASTETESEALVSGESGIKLGCLVSTPAA*
Ga0102851_101887072	3300009091	Freshwater Wetlands	MERFMPRLATTEIYMIKKSAEGFIVSFRRGTDHGVRPGMQLAVLNEDGFRVGVVEVLASTETESEALVSGESGIKLGCLVSIPAA*
Ga0102851_103960523	3300009091	Freshwater Wetlands	VIGRCTALAQELHMPRHDATEIYMIKKSAEGFIVSFRRGTDHGVRPGMQLAVVNEDGFRVGVVEVLASTEAESEALVSGESGIKLGCLVSIPAPASSS*
Ga0102851_104727122	3300009091	Freshwater Wetlands	MMERFMPRLDTTEIYMIKKSAEGFIVSFRCGTDHGVRPGMQLAVLNEDGFGVGIVEVLASTETESEALVSGESGIKLGCLVSVPAG*
Ga0102851_108303003	3300009091	Freshwater Wetlands	MPRRDTTEIYMIKKSTEGFIVSFRRGTDHGVRPGMQLAVVNEDGFRVGVVEVRASTETESEALVSGESGIKLGCLVS
Ga0102851_132455301	3300009091	Freshwater Wetlands	MEQFMVRPDTTEIYKIKKSTEGFIVSFRSGTEHGIRPGMKLAVLNEDGFRVGVVEVLASTETESEALVSGDSGIKLGCLVSMPTV*
Ga0102851_135148872	3300009091	Freshwater Wetlands	MPRHDTTEIYMIKKSAEGFIVSFRRGTDHGVRPGMQLAVVNEDGFRVGVVEVRASTETESEALVSGESGIKLGCLVS
Ga0115026_102090233	3300009111	Wetland	MELFITRLATTEIYMIKKSAEGFIVSFRRGTDHGVRPGMQLAVLNEDGFRVGVVEVLASTETESEALVSGESGIKLGCLVSIPAA*
Ga0115026_104577413	3300009111	Wetland	VIGRCTALAQELHMPRHDATEIYMIKKSAEGFIVSFRRGTDHGVRPGMQLAVVNEDGFRVGVVEVRASTETESEALVSGESGIKLGCLVSIPAPAS
Ga0115026_104903542	3300009111	Wetland	MMERFMPRLDTTEIYMIKKSAEGFIVSFRRGTDHGVRPGMQLAVLNEDGFGVGIVEVLASTETESEALVSGESEIKLGCLVSVPAG*
Ga0115026_108286062	3300009111	Wetland	MIKKSTAGLLVSFRLGTGEGVRPGMTLAVVNEDGLRVGVVEVVSSTETESDALAFDERGVKLGCHVRMPAQI*
Ga0115027_100426071	3300009131	Wetland	RKVERFMPRHDTTEIYMIKKSTEGFIFSFRRGTDHGVRPGMQLAVLNEDGFRVGFVEVLGSTETESEALVSGESGIKLGCLVSVPAP*
Ga0115027_100922761	3300009131	Wetland	MMERFMPRLDTTEIYMIKKSAEGFIVSFRRGTDHGVRPGMQLAVLNEDGFGVGIVEVLASTETESEALVSGESGIKLGCLVSVPAG*
Ga0115027_101034432	3300009131	Wetland	MERFMPRLATTEIYMIKKSAEGFIVSFRRGTDHGVRPGMQLAVLNEDGFRVGVVVVLASTETESEALVSGESGIKLGCLVSIPAA*
Ga0115027_104834751	3300009131	Wetland	VIGRCPALVKEQLMPRQDASAIYMIKKSAEGSIVAFRRGTDQGIRPGMQLTVVNEDGIRVGVVKVLESTETQSEALVSGESGIKLGCLVSMPQGG*
Ga0115027_106952411	3300009131	Wetland	VIGRCPALVKEQLMPRQDASAIYMIKKSAEGSIVSFRRGTDHGVRPGMQLTVVNEDGFRVGVVEVLVSSETESEALVSGESGVKLGCLVSLPQGG*
Ga0115027_109926903	3300009131	Wetland	MPRHDATEIYMIKKSAEGFIVSFRRGTDHGVRPGMQLAVVNEDGFRVGVVEVRASTETESEALVSGESGI
Ga0113563_104465712	3300009167	Freshwater Wetlands	VIGRCPALVKEQLMPRQDASAIYMIKKSAEGSIVSFRRGTDHGVRPGMQLTVVNEDGFRVGVVEVIVSSETESEALVSGESGVKLGCLVSLPTV*
Ga0113563_110024892	3300009167	Freshwater Wetlands	MMERFMPRLDTTEIYMIKKSAEGFIVSFRRGTDHGVRPGMQLAVLNEDGFRVGVVEVLASTEAESEALVSGESGIKLGCLVSIPNRLSV*
Ga0113563_113562812	3300009167	Freshwater Wetlands	MDRFMSQRDTTEIYMIKKSAEGFIVSFRRGTDHGVRPGMQLAVLNEDGFRVGVVEVLGSTETESEALVAGESGIKLGCLVSIPQPMRPG*
Ga0113563_122848652	3300009167	Freshwater Wetlands	PRLDTTEIYMIKKSAEGFIVSFRRGTDHGVRPGMQLAVLNEDGFGVGIVEVLASTDTESEALVSGESGIKLGCLVSVPAG*
Ga0113563_126654621	3300009167	Freshwater Wetlands	MPRHDTTEIYMIKKSAEGFIVSFRRGTDHGVRPGMQLAVLNEDGFRVGVVEVLASTEAESEALVSGESGIKLGCLVSIPAPASSS*
Ga0105097_102980972	3300009169	Freshwater Sediment	VIERCTALTEEPFMPRHDTTEIYMIKKSTEGFVVSFRRGTDQGIRPGMKLTVVNEDGFRVGVVEVLTSTETESEALVSGESGIKLGCLVSLPTA*
Ga0105097_106108551	3300009169	Freshwater Sediment	MDRKSTSEIYMIKKSAEGFIVSFRMGTRHGVEPGMDLAVLNEDGFSVVTVQVLASTENESDALVAGESSSKLGCRLSLSGAPKDS*
Ga0105096_103169482	3300009170	Freshwater Sediment	MPRLDTSEIYMIKKSAEGFIVSFRRGTDHGVRPGMQLAVLNEDGFRMGVVEVLASTETESEALVSGESGIKLGCLVSTPAA*
Ga0114938_10016949	3300009430	Groundwater	MVRPDTTEIYMIKKSTEGFVVSFRRGTAHGIRPGMRLTVVNEDGFRVGVVEVLGSTETESEALVSGESGIKLGCLVSLPTA*
Ga0114938_13293831	3300009430	Groundwater	STEGFVVSFRRGTAHGIRPGMRLTVVNEDGFRVGIVEVLGSTEAESEALVFGESGIKLGCLVSLPAA*
Ga0114939_102053282	3300009455	Groundwater	MPRHDTTEIYMIKKSAAGFIVSFRRGTDHGVGPGMHLTVVNEDGIRVGAVEVLSSTEAESEALVSGESGVKLGCRVRLPAA*
Ga0136852_102641011	3300010412	Mangrove Sediment	MHRLDTTEIYMIKKSAEGFIVSFRRGTDHGVRPGMQLAVLNEDGFRVGGVEVLASTEAESEALVSGESGIKLGCLV
Ga0075315_11000322	3300014258	Natural And Restored Wetlands	MDQRSTSEIYMIKKSAEGFVVSFRMGTRHGVEPGMDLAVLNEDGFSVGTVQVLSSTETESDALVAGESAIKLGCRISLSGTPKTS*
Ga0075349_10016161	3300014305	Natural And Restored Wetlands	LFTVLLRRIHLRQRLHAPPRPPAGYDPSELERFMHRLDTTEIYMIKKSAEGFIVSFRRGTDHGVRPGMQLAVLNEDGFRVGVVEVLASTEAESEALVSGESGIKLGCLVSIPTV*
Ga0075304_11105781	3300014307	Natural And Restored Wetlands	MHRLDTTEIYMIKKSAEGFIVSFRRGTDHGVRPGMQLAVLNEDGFRVGVVEVLASTEAESEALVSGESGIKL
Ga0075350_10408352	3300014315	Natural And Restored Wetlands	MMERFMPRLDTTEIYMIKKSAEGFIVSFQRGTDHGVRPGMQLAVLNEDGFRVGVVEVLASTESGSEALVSGESGIKLGCLVSLPAA*
Ga0075348_10022692	3300014319	Natural And Restored Wetlands	MHRLDTTEIYMIKKSAEGFIVSFRRGTDHGVRPGMQLAVLNEDGFRVGVVEVLASTEAESEALVSGESGIKLGCLVSIPVV*
Ga0075342_11398471	3300014320	Natural And Restored Wetlands	MHRLDTTEIYMIKKSAEGFIVSFRRGTDHGVRPGMQLAVLNEDGYRVGVVEVLASTEVESEALVSGESGIKLGCLVSI
Ga0075353_10023432	3300014321	Natural And Restored Wetlands	MPRHDVTEIYMIKKSAEGFIVSFRRGTDHGVRPGMQLAVVNEDGFRVGVVEVLASTETDSEALVSGESGIKLGCLVSIPQPMRPG*
Ga0075352_10330522	3300014324	Natural And Restored Wetlands	MPRHDVTEIYMIKKSAEGFIVSFRRGTDHGVRPGMQLAVVNEDGFRVGLVEVLASTETDSEALVSGESGIKLGCLVSIPQPMRPG*
Ga0187785_103260851	3300017947	Tropical Peatland	MTKPGPNQIYMLKKSAEGFIVSFRLGTNDGVQPGMELAVLNEEGFPIGTVKVLASTETDSEALVSSESGVKLGCLIRRPAAAQPIQPTLH
Ga0124853_10237601	3300024056	Freshwater Wetlands	MPRLATTEIYMIKKSAEGFIVSFRRGTDHGVRPGMQLAVLNEDGFRVGVVEVLASTETESEALVSGESGIKLGCLVSIPAA
Ga0124853_10261073	3300024056	Freshwater Wetlands	MPRRDTTEIYMIKKSTEGFIVSFRRGTDHGVRPGMQLAVVNEDGFRVGVVEVRASTETESEALVSGESGIKLGCLVSITAPASSS
Ga0124853_11361353	3300024056	Freshwater Wetlands	MPRRDTTEIYMIKKSTEGFIVSFRRGTDHGVRPGMQLAVVNEDGFRVGVVEVRASTETESEALVSGESGIKLGCLVSIPAPASSS
Ga0209398_10018674	3300025106	Groundwater	MVRPDTTEIYMIKKSTEGFVVSFRRGTAHGIRPGMRLTVVNEDGFRVGVVEVLGSTETESEALVSGESGIKLGCLVSLPTA
Ga0210098_10471622	3300025550	Natural And Restored Wetlands	MPRLDTTEIYMIKKSAEGFIVSFQRGTDHGVRPGMQLAVLNEDGFRVGVVEVLASTESESEALVSGESGIKLGCLVSLPAA
Ga0210104_10031882	3300025956	Natural And Restored Wetlands	MHRLDTTEIYMIKKSAEGFIVSFRRGTDHGVRPGMQLAVLNEDGFRVGVVEVLASTEAESEALVSGESGIKLGCLVSIPTV
Ga0210127_10001586	3300025964	Natural And Restored Wetlands	MHRLDTTEIYMIKKSAEGFIVSFRRGTDHGVRPGMQLAVLNEDGFRVGVVEVLASTEAESEALVSGESGIKLGCLVSIPAV
Ga0210105_10766792	3300025966	Natural And Restored Wetlands	MHRLDTTEIYMIKKSAEGFIVSFRRGTDHGVRPGMQLAVLNEDGFRVGVVEVLASTEAESEALVSGESG
Ga0208915_10281601	3300026048	Natural And Restored Wetlands	MPRHDVTEIYMIKKSAEGFIVSFRRGTDHGVRPGMQLAVVNEDGFRVGVVEVLASTETDSEALVSGESGIKLGCLVSIPQPMRPG
Ga0208540_10361912	3300026059	Natural And Restored Wetlands	MHRLDTTEIYMIKKSAEGFIVSFRRGTDHGVRPGMQLAVLNEDGFRVGVVEVLASTEAESEALVSGESGIKLGCLVSIPVV
Ga0256811_10036982	3300026349	Sediment	MPRHDTTEIYMIKKSTAGFIVSFRRGTDHGIRPGMQLAVLNEDGFPVGIVEVLASTETESDALVSGESGIKLGCLVSIPASAPSR
Ga0256823_10028053	3300026350	Sediment	MPRHDTTEIYMIKKSTAGFIVSFRRGTDHGIRPGMQLAVLNEDGFPVGIVEVLASTETESDALVSGESGIK
Ga0256807_11028162	3300026477	Sediment	MPRHDTTEIYMIKKSTAGFIVSFRRGTDHGIRPGMQLAVLNEDGFPVGIVEVLASTETESDALVSGES
Ga0256806_10043252	3300026501	Sediment	MAKDEPTEIYMIKKSADGFIVSFRLGTDLGIRPGMGLVVLNEDGFQVGKVTVLSSTEKESEALVAGESGIKLGCRVSLPAAARGVLT
Ga0256806_10182061	3300026501	Sediment	DPSELERFMHRLDTTEIYMIKKSAEGFIVSFRRGTDHGVRPGMQLAVLNEDGFRVGVVEVLASTEAESEALVSGESGIKLGCLVSIPMV
Ga0208665_100340312	3300027715	Deep Subsurface	MIKKSTAGLLVSFRLGTGEGVRPGMTLAVVNEDGLRVGVVEVVSSTETESDALAFDERGVKLGCHVRVPAQI
Ga0209492_10261152	3300027721	Freshwater Sediment	MPRLDTSEIYMIKKSAEGFIVSFRRGTDHGVRPGMQLAVLNEDGFQVGVVEVLASTETESEALVSGESGIKLGCLVSTPAA
Ga0209285_1000050312	3300027726	Freshwater Sediment	MPRHDTTEIYMIKKSAEGFIVSFRRGTDHGVRPGMQLAVLNEDGFRVGFVEVLASTDTESEALVSGESSIKLGCLVSIPAA
Ga0209800_103921331	3300027800	Freshwater	MPRLDTTEIYMIKKSAEGFIVSFRRGTDHGVRPGMQLAVLNEDGFGVGIVEVLASTETESEALVSGESGIKLGCLVSVPAG
Ga0209262_100360902	3300027841	Freshwater	MIKKSAAGLLVSFRLGTGEGVRPGMTLAVVNEDGLRVGVVEVVSSTATESNALAFDERGVKLGCHVRVPAGG
Ga0209397_100437802	3300027871	Wetland	MPRLATTEIYMIKKSAEGFIVSFRRGTDHGVRPGMQLAVLNEDGFRVGVVVVLASTETESEALVSGESGIKLGCLVSIPAA
Ga0209397_101513682	3300027871	Wetland	MPRQDASAIYMIKKSAEGSIVSFRRGTDHGVRPGMQLTVVNEDGFRVGVVEVLVSSETESEALVSGESGVKLGCLVSLPTV
Ga0209397_103106411	3300027871	Wetland	MPRHDTTEIYMIKKSAEGFIVSFRRGTDHGVRPGMQLAVLNEDGFRVGVVEVLASTEAESEALVSGESGIKLGCLVSI
Ga0209397_103117092	3300027871	Wetland	ERFMPRLDTTEIYMIKKSAEGFIVSFRRGTDHGVRPGMQLAVLNEDGFGVGIVEVLASTETESEALVSGESGIKLGCLVSVPAG
Ga0209397_103530251	3300027871	Wetland	MIKKSTAGLLVSFRLGTGEGVRPGMTLAVVNEDGLRVGVVEVVSSTETESDALAFDERGVKLGCHVRMPAQI
Ga0209397_103776641	3300027871	Wetland	MPRHDATEIYMIKKSAEGFIVSFRRGTDHGVRPGMQLAVVNEDGFRVGVVEVRASTETESEALVSGESGIKLG
Ga0209293_100663902	3300027877	Wetland	QQPQTSSDCNHRKVKRFMPRRDTTEIYMIKKSTEGFIVSFRRGTDHGVRPGMQLAVVNEDGFRVGVVEVRASTETESEALVSGESGIKLGCLVSIPAPASSS
Ga0209450_1000081815	3300027885	Freshwater Lake Sediment	MPRLDTTEIYMIKKSAEGFIVSFRRGTDHGVRPGMQLAVLNEDGFGVGIVEVLASTETESEALVSSESGIKLGCLVSVPAG
Ga0209450_104893661	3300027885	Freshwater Lake Sediment	PHIVIERCTALTEEPFMPRNDATEIYMIKKSTEGFVVSFRRGTDHDIRPGMKLTVVNEDGFRVGVVEVLTSTETESEALVSGESGIKLGCLVSLPTA
Ga0208980_104198361	3300027887	Wetland	MPRRDTTEIYMIKKSTEGFIVSFRRGTDHGVRPGMQLAVLNEDGFRVGFVEVLGSTETESEALVSSESGIKLGCLVSIPAL
Ga0209496_100340741	3300027890	Wetland	MPRRDTTEIYMIKKSTEGFIVSFRRGTDHGVRPGMQLAVVNEDGFRVGVVEVRASTETESEALVSGESGIKLGCLVSI
Ga0209668_101259151	3300027899	Freshwater Lake Sediment	IYMIKKSTAGLLVSFRLGTGEGVRPGMTLAVVNEDGLRVGVVEVVSSTETESDALAFDERGVKLGCHVRMPAQI
Ga0209079_100831583	3300027972	Freshwater Sediment	MPRHDTTEIYMIKKSAEGFIVSFRRGTDHGVRPGMQLAVLNEDGFQVGVVEVLASTETESEALVSGESGIKLGCLVSTPAA
Ga0209391_103614522	3300027975	Freshwater Sediment	MDRKSTSEIYMIKKSAEGFIVSFRMGTRHGVEPGMDLAVLNEDGFSVGTVQVLSSTENESDALVAGESAIKLGCRVSLSGAPKDS
Ga0316195_105818122	3300032263	Sediment	LQCQPRIAFYPYLESVMTKAGTTAIYMLKKSADGFIVSFRLGTDDGVRPGMNLAVLNEDGFRVGTVEVLTSTETESEALVSGESGVKLGCLIRRPAAGNAVKPSAH
Ga0335084_100829284	3300033004	Soil	MMGTETSQIYMIKKRKEGTIVSFRMGTNHGIKPGMQLDVVNEDGFLVGIVEIFMSTETESEALIVGQNSISLGCSIKTSGSAKQG
Ga0335084_109982272	3300033004	Soil	MPRQDAIEIYMIKKSAEGFLVSFRRGTDHGVRPGMQLAVVNEDGFPVGVVEVLASTETESEALVSGESAVKLGCRVSLPQATPSA
Ga0316604_108403011	3300033406	Soil	MPRHAATEIYKIKKSAEGFIVSFRRGTDHGIRPGMQLTVVNEEGFRVGVVEVLESTESESEALVSGESGVKLGCL
Ga0316605_101894013	3300033408	Soil	MPLHDTTEIYMIKKSTEGFIVSFRCGTDHGVQPGMQLAVLNEDGFRVGVVKVLASTETESEALVSVESGIKLGCLVSIPTA
Ga0316605_102467634	3300033408	Soil	MPRRDTTEIYMIKKSTEGFIVSFRRGTDHGVRPGMQLAVVNEDGFRVGVVEVRASTETESEALVSGESGIKLGCL
Ga0316605_111782883	3300033408	Soil	MPRHDATEIYMIKKSAEGFIVSFRRGTDHGVRPGMQLAVVNEDGFRVGVVEVRASTETESEALVSGESGIKLGCLVSIPAPASSS
Ga0316605_121289511	3300033408	Soil	MSQRDTTEIYMIKKSAEGFIVSFRRGTDHGVRPGMQLAVLNEDGFRVGVVEVLGSTETESEALVAGESGIKLG
Ga0316605_121478841	3300033408	Soil	MPRNDATEIYMIKKSTEGFVVSFRRGTDHGIRPGMKLTVVNEDGFRVGVVEVLTSTETESEALVSGESGIKL
Ga0316603_101048861	3300033413	Soil	FRKVERFMPLHDTTEIYMIKKSTEGFIVSFRCGTDHGVQPGMQLAVLNEDGFRVGVVKVLASTETESEALVSVESGIKLGCLVSIPTA
Ga0316603_104066093	3300033413	Soil	MPRHDATEIYMIKKSAEGFIVSFRRGTDHGVRPGMQLAVVNEDGFRVGVVEVRASTETESEALVSGESGIKLGCLVSIPAP
Ga0316603_104953152	3300033413	Soil	MPRLDTTEIYMIKKSAEGFIVSFRCGTDRGVRPGMQLAVLNEDGFRVGVVEVLGSTETESEALVAGESGIKLGCLVSIPQPMRPG
Ga0316603_108096802	3300033413	Soil	MPRHDTTEIFMIKKSTEGFVVSFRRGTDHGVRPGMQLAVLNEDGFRVGVVEVLASTEAESEALVSGESGIKLGCLVSIPNRLSV
Ga0316619_105064671	3300033414	Soil	MPRHDATEIYMIKKSAEGFIVSFRRGTDHGVRPGMQLAVVNEDGFRVGVVEVLASTEAESEALVSGESGIKLGCLVSIPAPASSS
Ga0316622_1001739974	3300033416	Soil	MPRHDTTEIYMIKKSAEGFIVSFRRGTDHGVRPGMQLAVLNEDGFRVGVVEVLASTEAESEALVSGESGIKLGCLVSIPAP
Ga0316625_1003718782	3300033418	Soil	MERFMPRLATTEIYMIKKSAEGFIVSFRRGTDHGVRPGMQLAVLNEDGFRVGVVEVLASTETESEALVSGESGIKLGCLVSIPAA
Ga0316625_1011225922	3300033418	Soil	MERFMPRLDTTEIYMIKKSAEGFIVSFRCGTDRGVRPGMQLAVLNEDGFRVGVVEVLACTEAESEALVSGESGIKLGCLVSIPAA
Ga0316601_1004429762	3300033419	Soil	MPRLDTTEIYMIKKSAEGFIVSFRCGTDRGVRPGMQLAVLNEDGFRVGVVEVLACTEAESEALVSGESGIKLGCLVSIPAA
Ga0316600_107760301	3300033481	Soil	EIYMIKKSAEGFIVSFRRGTDHGVRPGMQLAVLNEDGFGVGIVEVLASTETESEALVSGESGIKLGCLVSVPAG
Ga0316627_1001377384	3300033482	Soil	MPRHDATEIYMIKKSAEGFIVSFRRGTDHGVRPGMQLAVVNEDGFRVGVVEVRASTETESEALVSGESGIKLGCLVSIPAPASS
Ga0316627_1002304932	3300033482	Soil	YMIKKSAEGFIVSFRRGTDHGVRPGMQLAVLNEDGFGVGIVEVLASTETESEALVSGESGIKLGCLVSVPAG
Ga0316627_1010689663	3300033482	Soil	MPLHDTTEIYMIKKSAEGFIVSFRCGTDHGVRPGMQLAVLNEDGFRVGVVKVLTSTETESEALVSGESGIKLGCLVSIPTA
Ga0316627_1015547682	3300033482	Soil	DTTEIYMIKKSAEGFIVSFRCGTDRGVRPGMQLAVLNEDGFRVGVVEVLACTEAESEALVSGESGIKLGCLVSIPAA
Ga0316629_117727291	3300033483	Soil	IYMIKKSTEGFIVSFRRGTDHGVRPGMQLAVVNEDGFRVGVVEVRASTETESEALVSGESGIKLGCLVSIPAPASSS
Ga0316624_118254431	3300033486	Soil	TTEIYMIKKSAEGFIVSFRRGTDHGVRPGMQLAVLNEDGFGVGVVEVLASTETESEALVSGESGIKLGCLVSIPAA
Ga0316630_103425293	3300033487	Soil	MPRHDTTEIYMIKKSAEGFIVSFRRGTDHGVRPGMQLAVLNEDGFRVGVVEVLASTEAESEALVSGESGIKLGCLVSIPAPASSS
Ga0316621_105547392	3300033488	Soil	CGPLMMERFMPRLDTTEIYMIKKSAEGFIVSFRRGTDHGVRPGMQLAVLNEDGFGVGIVEVLASTETESEALVSGESGIKLGCLVSVPAG
Ga0316631_101644431	3300033493	Soil	MPRHDTTEIYMIKKSAEGFIVSFRRGTDHGVRPGMQLAVVNEDGFRVGVVEVRASTETESEALVSGESGIKLGCLV
Ga0316628_1000010305	3300033513	Soil	MPRQDATEIYMIKKSAEGFLVSFRRGTNHGVRPGMRLAVLNEDGFHVGVVDVLTSTETESEALVSGESGVKLGCRVSVPQPTPSG
Ga0316628_1006964684	3300033513	Soil	MPRHDATEIYMIKKSAEGFIVSFRRGTDHGIRPGMQLTVVNEDGFRVGVVEVLASTETEREALVSGESGI
Ga0316628_1025067982	3300033513	Soil	TEIYMIKKSTEGFIVSFRRGTDHGVRPGMQLAVVNEDGFRVGVVEVRASTETESEALVSGESGIKLGCLVSIPAPASSS
Ga0316616_1027702482	3300033521	Soil	MPRHDTTEIFMIKKSTVGFVVSFRRGTDHGVRPGMQLAVLNEDGFRVGVVEVLASTEAESEALVSGESGIKLGCLVSIPNRLSV
Ga0316617_1003413082	3300033557	Soil	MPRHDTTEIYMIKKSTEGFIVSFRRGTDHGVRPGMQLAVLNEDGFRVGFVEVLGSTETESEALVSGESGIKLGCLVSVPAP
Ga0316617_1007482473	3300033557	Soil	MPAIAPSAIYMIKKSADGLLVSFRLGVKDGVRPGMRLAVVNEDGFRVGTVEVVATTETESTALALDGREVKLGCLVRATPHG
Ga0370502_0078523_819_1043	3300034156	Untreated Peat Soil	MSGLPSSAIYMIKKSADGLLVSFRLGTGEGVRPGMTLAVVNEDDMRVGVVEVVSSTETESSALAFDERGVKLGCR
Ga0370480_0215244_278_496	3300034169	Untreated Peat Soil	MIKKSTAGLLVSFRLGTGEGVRPGMTLAVVNEDGLRVGVVEVVSSTETESNALAVDERGVKLGCHVRVPAQI

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F052015

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences