Metagenome / Metatranscriptome Family F052026

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F052026
Family Type	Metagenome / Metatranscriptome
Number of Sequences	143
Average Sequence Length	85 residues
Representative Sequence	MSTMAIGLERDQLRLIGSRPGTAGKGPRLYAAERICGASKCRTVLSRYNRTELCWLHEPRHEYLSAVRGRRPAEVEVLDQLVAKVS
Number of Associated Samples	120
Number of Associated Scaffolds	143

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	86.01 %
% of genes near scaffold ends (potentially truncated)	20.98 %
% of genes from short scaffolds (< 2000 bps)	77.62 %
Associated GOLD sequencing projects	112
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (69.231 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand (14.685 % of family members)
Environment Ontology (ENVO)	Unclassified (39.161 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Subsurface (non-saline) (39.860 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 8.14% β-sheet: 19.77% Coil/Unstructured: 72.09%
Feature Viewer

Powered by Feature Viewer

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 143 Family Scaffolds
PF08327	AHSA1	11.89
PF10604	Polyketide_cyc2	10.49
PF01566	Nramp	9.09
PF10431	ClpB_D2-small	5.59
PF13527	Acetyltransf_9	3.50
PF00149	Metallophos	2.10
PF13466	STAS_2	1.40
PF12670	DUF3792	0.70
PF05532	CsbD	0.70
PF14907	NTP_transf_5	0.70
PF00903	Glyoxalase	0.70
PF04972	BON	0.70
PF13581	HATPase_c_2	0.70
PF05175	MTS	0.70
PF10762	DUF2583	0.70
PF03631	Virul_fac_BrkB	0.70
PF01028	Topoisom_I	0.70
PF02678	Pirin	0.70
PF12850	Metallophos_2	0.70
PF01230	HIT	0.70

COG ID	Name	Functional Category	% Frequency in 143 Family Scaffolds
COG1914	Mn2+ or Fe2+ transporter, NRAMP family	Inorganic ion transport and metabolism [P]	9.09
COG1295	Uncharacterized membrane protein, BrkB/YihY/UPF0761 family (not an RNase)	Function unknown [S]	0.70
COG1741	Redox-sensitive bicupin YhaK, pirin superfamily	General function prediction only [R]	0.70
COG3237	Uncharacterized conserved protein YjbJ, UPF0337 family	Function unknown [S]	0.70
COG3569	DNA topoisomerase IB	Replication, recombination and repair [L]	0.70

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	69.23 %
Unclassified	root	N/A	30.77 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	69.23 %
Unclassified	root	N/A	30.77 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	69.23 %
Unclassified	root	N/A	30.77 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	51.75 %
Unclassified	root	N/A	30.77 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	41.26 %
Unclassified	root	N/A	30.77 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	31.47 %
Unclassified	root	N/A	30.77 %
Acidimicrobiia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia	4.20 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	30.77 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	23.08 %
Acidimicrobiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales	4.20 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.70 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	30.77 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	23.08 %
Ilumatobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Ilumatobacteraceae	4.20 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.70 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	30.77 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	23.08 %
Desertimonas	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Ilumatobacteraceae → Desertimonas	4.20 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.70 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	30.77 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	23.08 %
Desertimonas flava	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Ilumatobacteraceae → Desertimonas → Desertimonas flava	4.20 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.70 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	0.70 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000033\|ICChiseqgaiiDRAFT_c0888636	Not Available	1194	Open in IMG/M
3300000550\|F24TB_10905276	All Organisms → cellular organisms → Bacteria	1219	Open in IMG/M
3300000956\|JGI10216J12902_108052635	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	927	Open in IMG/M
3300004643\|Ga0062591_101515344	Not Available	671	Open in IMG/M
3300005185\|Ga0066811_1001913	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1083	Open in IMG/M
3300005332\|Ga0066388_100139619	All Organisms → cellular organisms → Bacteria	2985	Open in IMG/M
3300005441\|Ga0070700_100137232	All Organisms → cellular organisms → Bacteria	1658	Open in IMG/M
3300005444\|Ga0070694_100425740	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1044	Open in IMG/M
3300005549\|Ga0070704_100041573	All Organisms → cellular organisms → Bacteria	3174	Open in IMG/M
3300005713\|Ga0066905_100254653	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1351	Open in IMG/M
3300005713\|Ga0066905_100316215	Not Available	1233	Open in IMG/M
3300005719\|Ga0068861_100178032	All Organisms → cellular organisms → Bacteria	1768	Open in IMG/M
3300005719\|Ga0068861_100216292	All Organisms → cellular organisms → Bacteria	1617	Open in IMG/M
3300005937\|Ga0081455_10003975	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	16770	Open in IMG/M
3300005937\|Ga0081455_10065469	All Organisms → cellular organisms → Bacteria	3039	Open in IMG/M
3300006058\|Ga0075432_10116759	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	999	Open in IMG/M
3300006196\|Ga0075422_10078898	Not Available	1235	Open in IMG/M
3300006580\|Ga0074049_13164660	Not Available	792	Open in IMG/M
3300006844\|Ga0075428_100027787	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	6258	Open in IMG/M
3300006844\|Ga0075428_100968434	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	901	Open in IMG/M
3300006847\|Ga0075431_100301766	All Organisms → cellular organisms → Bacteria	1618	Open in IMG/M
3300006852\|Ga0075433_11107016	Not Available	689	Open in IMG/M
3300006865\|Ga0073934_10570633	Not Available	666	Open in IMG/M
3300006871\|Ga0075434_100291214	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1653	Open in IMG/M
3300009081\|Ga0105098_10067555	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1488	Open in IMG/M
3300009100\|Ga0075418_10098976	All Organisms → cellular organisms → Bacteria → Terrabacteria group	3098	Open in IMG/M
3300009100\|Ga0075418_10124296	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2741	Open in IMG/M
3300009100\|Ga0075418_12042487	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	624	Open in IMG/M
3300009146\|Ga0105091_10010920	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3846	Open in IMG/M
3300009147\|Ga0114129_10794802	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1207	Open in IMG/M
3300009148\|Ga0105243_10231021	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1641	Open in IMG/M
3300009156\|Ga0111538_10062646	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4742	Open in IMG/M
3300009157\|Ga0105092_10036795	All Organisms → cellular organisms → Bacteria	2608	Open in IMG/M
3300009168\|Ga0105104_10647191	All Organisms → cellular organisms → Bacteria → Terrabacteria group	604	Open in IMG/M
3300009610\|Ga0105340_1049926	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1633	Open in IMG/M
3300009789\|Ga0126307_10211765	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1556	Open in IMG/M
3300009800\|Ga0105069_1043524	All Organisms → cellular organisms → Bacteria → Terrabacteria group	545	Open in IMG/M
3300009801\|Ga0105056_1003056	All Organisms → cellular organisms → Bacteria	1576	Open in IMG/M
3300009801\|Ga0105056_1075174	Not Available	507	Open in IMG/M
3300009809\|Ga0105089_1045874	Not Available	666	Open in IMG/M
3300009811\|Ga0105084_1090790	Not Available	570	Open in IMG/M
3300009812\|Ga0105067_1005647	All Organisms → cellular organisms → Bacteria	1505	Open in IMG/M
3300009814\|Ga0105082_1036932	All Organisms → cellular organisms → Bacteria	793	Open in IMG/M
3300009817\|Ga0105062_1002147	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2547	Open in IMG/M
3300009823\|Ga0105078_1021750	Not Available	746	Open in IMG/M
3300009836\|Ga0105068_1016541	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1231	Open in IMG/M
3300009837\|Ga0105058_1017689	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1474	Open in IMG/M
3300010029\|Ga0105074_1120091	All Organisms → cellular organisms → Bacteria → Terrabacteria group	509	Open in IMG/M
3300010038\|Ga0126315_10120894	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1526	Open in IMG/M
3300010040\|Ga0126308_10004576	All Organisms → cellular organisms → Bacteria	6391	Open in IMG/M
3300010043\|Ga0126380_12175327	Not Available	512	Open in IMG/M
3300010047\|Ga0126382_11767489	Not Available	580	Open in IMG/M
3300010166\|Ga0126306_10435942	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Ilumatobacteraceae → Desertimonas → Desertimonas flava	1029	Open in IMG/M
3300010362\|Ga0126377_10077290	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2979	Open in IMG/M
3300010362\|Ga0126377_12187146	Not Available	629	Open in IMG/M
3300011398\|Ga0137348_1045646	All Organisms → cellular organisms → Bacteria → Terrabacteria group	738	Open in IMG/M
3300011412\|Ga0137424_1045206	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	787	Open in IMG/M
3300012159\|Ga0137344_1104897	Not Available	523	Open in IMG/M
3300012204\|Ga0137374_10402050	All Organisms → cellular organisms → Bacteria	1088	Open in IMG/M
3300012355\|Ga0137369_10048901	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3716	Open in IMG/M
3300012358\|Ga0137368_10054857	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3347	Open in IMG/M
3300012360\|Ga0137375_11019905	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	650	Open in IMG/M
3300012948\|Ga0126375_10252905	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1195	Open in IMG/M
3300014325\|Ga0163163_10601430	Not Available	1163	Open in IMG/M
3300014965\|Ga0120193_10004187	Not Available	1112	Open in IMG/M
3300015258\|Ga0180093_1029272	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1172	Open in IMG/M
3300015371\|Ga0132258_12522268	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Ilumatobacteraceae → Desertimonas → Desertimonas flava	1286	Open in IMG/M
3300015373\|Ga0132257_103508270	Not Available	571	Open in IMG/M
3300015374\|Ga0132255_102465965	Not Available	794	Open in IMG/M
3300017792\|Ga0163161_10469455	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1020	Open in IMG/M
3300017965\|Ga0190266_10864786	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	589	Open in IMG/M
3300017997\|Ga0184610_1004252	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3336	Open in IMG/M
3300018028\|Ga0184608_10000674	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	9341	Open in IMG/M
3300018052\|Ga0184638_1053514	Not Available	1470	Open in IMG/M
3300018052\|Ga0184638_1104069	All Organisms → cellular organisms → Bacteria	1041	Open in IMG/M
3300018052\|Ga0184638_1122414	Not Available	950	Open in IMG/M
3300018053\|Ga0184626_10024601	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2463	Open in IMG/M
3300018056\|Ga0184623_10205757	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	904	Open in IMG/M
3300018063\|Ga0184637_10350164	Not Available	888	Open in IMG/M
3300018072\|Ga0184635_10175946	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	855	Open in IMG/M
3300018073\|Ga0184624_10069866	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1461	Open in IMG/M
3300018074\|Ga0184640_10213916	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	872	Open in IMG/M
3300018075\|Ga0184632_10013548	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3432	Open in IMG/M
3300018075\|Ga0184632_10168603	Not Available	966	Open in IMG/M
3300018075\|Ga0184632_10292680	All Organisms → cellular organisms → Bacteria	705	Open in IMG/M
3300018076\|Ga0184609_10064235	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1594	Open in IMG/M
3300018076\|Ga0184609_10378584	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	660	Open in IMG/M
3300018076\|Ga0184609_10525352	Not Available	537	Open in IMG/M
3300018078\|Ga0184612_10012631	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4291	Open in IMG/M
3300018078\|Ga0184612_10065043	Not Available	1900	Open in IMG/M
3300018079\|Ga0184627_10385475	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	731	Open in IMG/M
3300018081\|Ga0184625_10075835	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1714	Open in IMG/M
3300018466\|Ga0190268_10006618	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2931	Open in IMG/M
3300018466\|Ga0190268_10539495	Not Available	806	Open in IMG/M
3300018469\|Ga0190270_12339121	Not Available	596	Open in IMG/M
3300018469\|Ga0190270_12982422	Not Available	535	Open in IMG/M
3300018476\|Ga0190274_10249525	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1608	Open in IMG/M
3300019259\|Ga0184646_1212886	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1839	Open in IMG/M
3300019884\|Ga0193741_1112955	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	691	Open in IMG/M
3300020003\|Ga0193739_1039276	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1225	Open in IMG/M
3300020003\|Ga0193739_1127457	Not Available	627	Open in IMG/M
3300020020\|Ga0193738_1148336	Not Available	630	Open in IMG/M
3300021081\|Ga0210379_10120203	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1103	Open in IMG/M
3300021082\|Ga0210380_10108221	Not Available	1232	Open in IMG/M
3300021972\|Ga0193737_1028059	Not Available	800	Open in IMG/M
3300022195\|Ga0222625_1635640	All Organisms → cellular organisms → Bacteria	665	Open in IMG/M
3300022534\|Ga0224452_1134313	Not Available	761	Open in IMG/M
3300025904\|Ga0207647_10160586	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Ilumatobacteraceae → Desertimonas → Desertimonas flava	1311	Open in IMG/M
3300025926\|Ga0207659_10194315	All Organisms → cellular organisms → Bacteria	1616	Open in IMG/M
3300027006\|Ga0209896_1021631	Not Available	725	Open in IMG/M
3300027163\|Ga0209878_1006881	All Organisms → cellular organisms → Bacteria	1643	Open in IMG/M
3300027379\|Ga0209842_1003023	All Organisms → cellular organisms → Bacteria	3350	Open in IMG/M
3300027560\|Ga0207981_1003159	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2926	Open in IMG/M
3300027561\|Ga0209887_1005197	All Organisms → cellular organisms → Bacteria	3671	Open in IMG/M
3300027561\|Ga0209887_1005681	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3500	Open in IMG/M
3300027561\|Ga0209887_1007586	All Organisms → cellular organisms → Bacteria	2957	Open in IMG/M
3300027577\|Ga0209874_1029900	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Ilumatobacteraceae → Desertimonas → Desertimonas flava	1496	Open in IMG/M
3300027650\|Ga0256866_1005087	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3248	Open in IMG/M
3300027873\|Ga0209814_10001166	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	9190	Open in IMG/M
3300027873\|Ga0209814_10242964	Not Available	780	Open in IMG/M
3300027907\|Ga0207428_10094199	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2322	Open in IMG/M
3300027909\|Ga0209382_10062904	All Organisms → cellular organisms → Bacteria	4396	Open in IMG/M
3300027909\|Ga0209382_10735512	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	1058	Open in IMG/M
3300027949\|Ga0209860_1054072	Not Available	532	Open in IMG/M
3300027952\|Ga0209889_1108689	Not Available	552	Open in IMG/M
3300027956\|Ga0209820_1051300	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Ilumatobacteraceae → Desertimonas → Desertimonas flava	1091	Open in IMG/M
3300028712\|Ga0307285_10237753	Not Available	516	Open in IMG/M
3300028784\|Ga0307282_10057133	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Ilumatobacteraceae → Desertimonas → Desertimonas flava	1752	Open in IMG/M
3300028803\|Ga0307281_10152492	Not Available	811	Open in IMG/M
3300028809\|Ga0247824_10581854	Not Available	670	Open in IMG/M
3300028819\|Ga0307296_10090469	All Organisms → cellular organisms → Bacteria	1636	Open in IMG/M
3300030336\|Ga0247826_10511901	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	908	Open in IMG/M
3300030606\|Ga0299906_10072870	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2735	Open in IMG/M
3300031995\|Ga0307409_100609525	Not Available	1080	Open in IMG/M
3300033550\|Ga0247829_10307240	Not Available	1289	Open in IMG/M
3300034113\|Ga0364937_007431	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1577	Open in IMG/M
3300034115\|Ga0364945_0104715	All Organisms → cellular organisms → Bacteria → Terrabacteria group	830	Open in IMG/M
3300034147\|Ga0364925_0036846	All Organisms → cellular organisms → Bacteria	1625	Open in IMG/M
3300034151\|Ga0364935_0022543	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1713	Open in IMG/M
3300034176\|Ga0364931_0053429	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1228	Open in IMG/M
3300034354\|Ga0364943_0009474	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2887	Open in IMG/M
3300034354\|Ga0364943_0378272	Not Available	545	Open in IMG/M
3300034417\|Ga0364941_164697	Not Available	564	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	79.02%
Host-Associated	Host-Associated	20.98%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	53.15%
Aquatic	Environmental → Aquatic	25.87%
Plants	Host-Associated → Plants	20.98%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	47.55%
Sediment	Environmental → Aquatic → Sediment	18.88%
Rhizosphere	Host-Associated → Plants → Rhizosphere	13.99%
Freshwater	Environmental → Aquatic → Freshwater	6.29%
Rhizoplane	Host-Associated → Plants → Rhizoplane	6.29%
Floodplain	Environmental → Terrestrial → Floodplain	5.59%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.70%
Roots	Host-Associated → Plants → Roots	0.70%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	27.97%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	18.88%
Sand	Environmental → Terrestrial → Soil → Sand	14.69%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	13.29%
Sediment	Environmental → Aquatic → Freshwater → Sediment	6.29%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	5.59%
Loam	Environmental → Terrestrial → Soil → Loam	4.90%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	4.20%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.10%
Sediment	Environmental → Aquatic → Thermal Springs → Sediment	0.70%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.70%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.70%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	23.78%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	18.88%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	14.69%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	13.29%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	6.29%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	5.59%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	4.20%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	2.10%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.10%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.10%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.10%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.40%
Unclassified	Environmental → Aquatic → Thermal Springs → Sediment → Unclassified	0.70%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.70%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.70%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.70%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.70%

Habitat	Taxonomy	Distribution
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	14.69%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	14.69%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	11.89%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	11.89%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	5.59%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	3.50%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	3.50%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	3.50%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	2.80%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	2.80%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	2.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.10%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	2.10%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.10%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.10%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	2.10%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.40%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	1.40%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.40%
Hot Spring Sediment	Environmental → Aquatic → Thermal Springs → Sediment → Unclassified → Hot Spring Sediment	0.70%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.70%
Terrestrial	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial	0.70%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.70%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.70%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.70%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.70%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.70%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.70%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.70%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.70%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000033	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000550	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU amended with acetate total DNA F2.4 TB clc assemly	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005185	Soil and rhizosphere microbial communities from Laval, Canada - mgHPB	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300006058	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1	Host-Associated	Open in IMG/M
3300006196	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1	Host-Associated	Open in IMG/M
3300006580	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPC (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006865	Hot spring sediment bacterial and archeal communities from British Columbia, Canada, to study Microbial Dark Matter (Phase II) - Larsen N4 metaG	Environmental	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300009081	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm May2015	Environmental	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009146	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 10-12cm March2015	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009157	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015	Environmental	Open in IMG/M
3300009168	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 19-21cm September2015	Environmental	Open in IMG/M
3300009610	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT700	Environmental	Open in IMG/M
3300009789	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28	Environmental	Open in IMG/M
3300009800	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N2_30_40	Environmental	Open in IMG/M
3300009801	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S2_20_30	Environmental	Open in IMG/M
3300009809	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S2_30_40	Environmental	Open in IMG/M
3300009811	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_20_30	Environmental	Open in IMG/M
3300009812	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N2_50_60	Environmental	Open in IMG/M
3300009814	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S2_50_60	Environmental	Open in IMG/M
3300009817	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_10_20	Environmental	Open in IMG/M
3300009823	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_40_50	Environmental	Open in IMG/M
3300009836	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_10_20	Environmental	Open in IMG/M
3300009837	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_20_30	Environmental	Open in IMG/M
3300010029	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_10_20	Environmental	Open in IMG/M
3300010038	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106	Environmental	Open in IMG/M
3300010040	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010166	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300011398	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT600_2	Environmental	Open in IMG/M
3300011412	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT620_2	Environmental	Open in IMG/M
3300012159	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT500_2	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012358	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_100_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014965	Terrestrial microbial communites from a soil warming plot in Okalahoma, USA - T2	Environmental	Open in IMG/M
3300015258	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLIBT45_16_1Da	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300017965	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 220 T	Environmental	Open in IMG/M
3300017997	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_coex	Environmental	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018052	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b2	Environmental	Open in IMG/M
3300018053	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_b1	Environmental	Open in IMG/M
3300018056	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_b1	Environmental	Open in IMG/M
3300018063	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b2	Environmental	Open in IMG/M
3300018072	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b2	Environmental	Open in IMG/M
3300018073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_b1	Environmental	Open in IMG/M
3300018074	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b2	Environmental	Open in IMG/M
3300018075	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b1	Environmental	Open in IMG/M
3300018076	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coex	Environmental	Open in IMG/M
3300018078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_coex	Environmental	Open in IMG/M
3300018079	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b1	Environmental	Open in IMG/M
3300018081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300019259	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019884	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2s2	Environmental	Open in IMG/M
3300020003	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2a2	Environmental	Open in IMG/M
3300020020	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2a1	Environmental	Open in IMG/M
3300021081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_coex redo	Environmental	Open in IMG/M
3300021082	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_coex redo	Environmental	Open in IMG/M
3300021972	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2m2	Environmental	Open in IMG/M
3300022195	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022534	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_b1	Environmental	Open in IMG/M
3300025904	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes)	Host-Associated	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300027006	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S2_20_30 (SPAdes)	Environmental	Open in IMG/M
3300027163	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_40_50 (SPAdes)	Environmental	Open in IMG/M
3300027379	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_10_20 (SPAdes)	Environmental	Open in IMG/M
3300027560	Soil and rhizosphere microbial communities from Laval, Canada - mgLPC (SPAdes)	Environmental	Open in IMG/M
3300027561	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_30_40 (SPAdes)	Environmental	Open in IMG/M
3300027577	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_20_30 (SPAdes)	Environmental	Open in IMG/M
3300027650	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT152D67 HiSeq	Environmental	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300027949	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S2_40_50 (SPAdes)	Environmental	Open in IMG/M
3300027952	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_0_10 (SPAdes)	Environmental	Open in IMG/M
3300027956	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm May2015 (SPAdes)	Environmental	Open in IMG/M
3300028712	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_139	Environmental	Open in IMG/M
3300028784	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121	Environmental	Open in IMG/M
3300028803	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_120	Environmental	Open in IMG/M
3300028809	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_PalmiticAcid_Day48	Environmental	Open in IMG/M
3300028819	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153	Environmental	Open in IMG/M
3300030336	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day1	Environmental	Open in IMG/M
3300030606	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT145D125	Environmental	Open in IMG/M
3300031995	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2	Host-Associated	Open in IMG/M
3300033550	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day4	Environmental	Open in IMG/M
3300034113	Sediment microbial communities from East River floodplain, Colorado, United States - 7_s17	Environmental	Open in IMG/M
3300034115	Sediment microbial communities from East River floodplain, Colorado, United States - 29_s17	Environmental	Open in IMG/M
3300034147	Sediment microbial communities from East River floodplain, Colorado, United States - 44_j17	Environmental	Open in IMG/M
3300034151	Sediment microbial communities from East River floodplain, Colorado, United States - 2_s17	Environmental	Open in IMG/M
3300034176	Sediment microbial communities from East River floodplain, Colorado, United States - 21_j17	Environmental	Open in IMG/M
3300034354	Sediment microbial communities from East River floodplain, Colorado, United States - 23_s17	Environmental	Open in IMG/M
3300034417	Sediment microbial communities from East River floodplain, Colorado, United States - 17_s17	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
ICChiseqgaiiDRAFT_08886362	3300000033	Soil	MSQMAIGLERDQLRLIGSRPGTAGKGPRMGAAGRICEASRCRTVLSRYNHAGLCWQHEPRHEYLSAVRGRRPAEVEVLSDLVPRAS*
F24TB_109052763	3300000550	Soil	MSQMAIGLERDQLRLIGSRPGTAGKGPRMNTTGRICGAARCRTVLSRYNHSELCWQHEPRHEYLSAVRGRRPAEVEVLNDLVPKAS*
JGI10216J12902_1080526351	3300000956	Soil	MTTMAIGSERDQLRLVGSRPGSSGRGPAMQPAGRVCEARRCRTVLSRYNHATLCWQHEPRHPYLSAVRGRRPAEIEVVDDLVTVAS*
Ga0062591_1015153441	3300004643	Soil	MSTTAIGSERDQLRLIGSRPGSSGKGPAMQPAGRICEAPRCRTVLSRYNHAPLCWQHEPRHPYLSAVRGRRPAEVEVVDDLISVAS*
Ga0066811_10019133	3300005185	Soil	GSRPGTAGKGPRMGAAGRICEASRCRTVLSRYNHAGLCWQHEPRHEYLSAVRGRRPAEVEVLIDLVPKAS*
Ga0066388_1001396196	3300005332	Tropical Forest Soil	MTTMAIGSDRDQLRLVGSRPGSSGKGPAMQAAGRICETPRCRTVLSRYNNSDLCWQHEPRHPYLSAVRGRRPAEIEVVDDLMVAAS*
Ga0070700_1001372321	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	MSTMAIGLERDQLRLMGSRPGTAGKGPRMGAAGRICEASRCRTVLSRYNHAGLCWQHEPRHEYLSAVRGRRPAEVEVLSELVPRAS*
Ga0070694_1004257401	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	MSQMAIGLERDQLRLIGSRPGTAGKGPRMNTAGRVCGVPRCRTVLSRYNHSELCWQHEPRHEYLSAVRGRRPAEVEVLNDLVPKAS*
Ga0070704_1000415731	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	MSTMAIGLERDQLRLIGSRPGTAGKGPRMGAAGRICEASRCRTVLSRYNHAGLCWQHEPRHEYLSAVRGRRPAEVEVLSELVPRAS*
Ga0066905_1002546532	3300005713	Tropical Forest Soil	MTTMAIGADRDQLRLVGSRPGSSGKGPAMQPAGRVCEAPRCRTVLSRYNHATLCWQHEPRHPYLSAVRGRRPAEVEVVEDLITVAS*
Ga0066905_1003162153	3300005713	Tropical Forest Soil	MTQMAIGSDRDQLRLVGSRPGSSGKGPSPEPAGRICEAPRCRTVLSRYNHVDLCWQHEPRHPYLSAVRGRRPAEIEVVDDLMAAS*
Ga0068861_1001780323	3300005719	Switchgrass Rhizosphere	MSTMAIGLERDQLRLIGSRPGTAGKGPRMGAAGRICEASRCRTVLSRYNHVGLCWQHEPRHEYLSAVRGRRPAEVEVLSDLVPKAS*
Ga0068861_1002162921	3300005719	Switchgrass Rhizosphere	GSRPGTAGKGPRMGAAGRICEASRCRTVLSRYNHAGLCWQHEPRHEYLSAVRGRRPAEVEVLSELVPRAS*
Ga0081455_1000397511	3300005937	Tabebuia Heterophylla Rhizosphere	MTTMAIGSERDQLRLVGSRPGSSGKGPAMQPAGRICDAPRCRTVLSRYNHATLCWQHEPRHPYLSAVRGRRPAEVEVVDDLIGVAS*
Ga0081455_100654693	3300005937	Tabebuia Heterophylla Rhizosphere	MSTMAIGLERDQLRFVGSRPGTAGKGPRMGAAGRICEASRCRTVLSRYNHAGLCWQHEPRHEYLSAVRGRRPAEVEVLSDLVPKAS*
Ga0075432_101167591	3300006058	Populus Rhizosphere	MSTMAIGSERDQLRLVGSRPGSSGKGPAMQPAGRICEAPRCMTVLSRYNHAPLCWQHEPRHPYLSAVRGRRPAEVEVVDDLISVAS*
Ga0075422_100788983	3300006196	Populus Rhizosphere	MSTMAIGSERDQLRLVGSRPGSSGKGPAMQPAGRICEAPRCMTVLSRYNHAPLCWQHEPRHPYLSAVRGRRPAEVEVVDNLISVAS*
Ga0074049_131646602	3300006580	Soil	MSTMAIGLERDQLRLVGSRPGTAGKGPRMGAAGRICEASRCRTVLSRYNHAGLCWQHEPRHEYLSAVRGRRPAEVEVLNDLVPKAS*
Ga0075428_1000277872	3300006844	Populus Rhizosphere	MSTMAIGVERDQLRLIGSRPGTAGKGPRLYAAERTCGASKCRTVLSRYNRTELCWLHEPRHEYLSAVRGRRPAEVEVLDQLVAKVS*
Ga0075428_1009684342	3300006844	Populus Rhizosphere	MTTMAIGSERDQLRLMGSRPGSSGKGPAMQAAGRICEARRCRTVLSRYNHATLCWQHEPRHPYLSAVRGRRPAEVEVVDDLISVAS*
Ga0075431_1003017663	3300006847	Populus Rhizosphere	MTTMAIGSERDQLRLMGSRPGSSGKGPAMQAAGRICEARRCRTVLSRYNHATLCWQHEPRHPYLSAVRGRRPAEVEVVDDLITVAS*
Ga0075433_111070163	3300006852	Populus Rhizosphere	MSTMAIGSERDQLRLVGSRPGSSGKGPALQPAGRICEAPRCRTVLSRYNHATLCWQHEPRHPYLSAVRGRRPAEVEVVDDLIGVAS*
Ga0073934_105706332	3300006865	Hot Spring Sediment	MSSMAIGLERDQLRLIGSRPGTAGKGPHLHAAERICGASKCRTVLSRYNHTDLCWLHEPRHEYLSAVRGRRPAEVEVLDQLVAKVS*
Ga0075434_1002912142	3300006871	Populus Rhizosphere	MSTMAIGSERDQLRLVGSRPGSSGKGPAMQPAGRICEAPRCMTVLSRYNDAPLCWQHEPRHPYLSAVRGRRPAEVEVVDDLISVAS*
Ga0105098_100675552	3300009081	Freshwater Sediment	MSTMATGLERDQLRLIGSRPGTAGKGPRLYGAERTCRASKCRTVLSRYNRTELCWLHEPRHEYLSAVRGRRPAEVEVLDQLVAKVS*
Ga0075418_100989764	3300009100	Populus Rhizosphere	MTTMAIASERDQLRLMGSRPGSSGKGPAMQAAGRICEARRCRTVLSRYNHATLCWQHEPRHPYLSAVRGRRPAEVEVVDDLISVAS*
Ga0075418_101242964	3300009100	Populus Rhizosphere	MSTMAIGLERDQLRLIGSRPGTAGKGPRLYAAERTCGASKCRTVLSRYNRTELCWLHEPRHEYLSAVRGRRPAEVEVLDQLVAKVS*
Ga0075418_120424871	3300009100	Populus Rhizosphere	MSTMAIGVERDQLRLIGSRPGTAGKGPRLYAAERTCRASKCRTVLSRYNRTELCWLHEPRHEYLSAVRGRRPAEVEVLDQLVAKVS*
Ga0105091_100109202	3300009146	Freshwater Sediment	MATGLERDQLRLIGSRPGTAGKGPRLYGAERTCGAKKCRTVLSRYNRTELCWLHEPRHEYLSAVRGRRPAEVEVLDQLVAKVS*
Ga0114129_107948022	3300009147	Populus Rhizosphere	MSTMAIGVERDQLRLIGSRPGTAGKGPRLYGAERTCGVKKCRTVLSRYNRTELCWLHEPRHEYLSAVRGRRPAEVEVLDQLVAKVS*
Ga0105243_102310212	3300009148	Miscanthus Rhizosphere	MSTMAIGLERDQLRLIGSRPGTAGKGPRMGAAGRICEASRCRTVLSRYNHAGLCWQHEPRHEYLSAVRGRRPAEVEVLSDLVPKAS*
Ga0111538_100626467	3300009156	Populus Rhizosphere	MTTMAIGSERDQLRLMGSRPGSSGKGPAMQAAGRICEARRCRTVLSRYNHATLCWQHEPRHPYLSAVRGRRPAEVEVVD
Ga0105092_100367952	3300009157	Freshwater Sediment	MSTMATGLERDQLRLIGSRPGTAGKGPRLYAAERICGAKKCRTVLSRYNRTELCWLHEPRHEYLSAVRGRRPAEVEVLDQLVAKVS*
Ga0105104_106471911	3300009168	Freshwater Sediment	MSTMAIGVERDQLRLIGSRPGTAGKGPRLYGAERICGAKKCRTVLSRYNRTELCWLHEPRHEYLSAVRGRRPAEVEVLDQLVAKVS*
Ga0105340_10499263	3300009610	Soil	MSTMAIGVERDQLRLIGSRPGTAGKGPRLYAAERICGASKCRTVLSRYNRTELCWLHEPRHEYLSAVRGRRPAEVEVLDQLVAKVS*
Ga0126307_102117652	3300009789	Serpentine Soil	MSTMAIGVERDQLRLVGSRPGTAGKGPSMGSAGRICEASRCRTVLSRYNHAELCWQHEPRHEYLSAVRGRRPADVEVLNDLVPKNDLVPRAS*
Ga0105069_10435241	3300009800	Groundwater Sand	MSTMAIGLERDQLRLIGSRPGTAGKGPRLHAAERICGASKCRTVLSRYNHTELCWLHEPRHEYLSAVRGRRPAEVEVL
Ga0105056_10030563	3300009801	Groundwater Sand	MSTMAIGLERDQLRLVGSRPGTAGKGPRMGAAGRICEASRCRTVLSRYNHAGLCWQHEPRHEYLSAVRGRRPAEVEVLSDLVPKAS*
Ga0105056_10751741	3300009801	Groundwater Sand	IGLERDQLRLIGSRPGTAGKGPRLYGAERTCGAKKCRTVLSRYNRTELCWLHEPRHEYLSAVRGRRPAEVEVLDQLVAKVS*
Ga0105089_10458741	3300009809	Groundwater Sand	MSTMAIGLERDQLRLVGSRPGTAGKGPRRYAAERTCGASKCRTVLSRYNRTELCWLHEPRHEYLSAVRGRRPAEIEVLDQLVAKVS*
Ga0105084_10907901	3300009811	Groundwater Sand	MSTMATGLERDQLRLIGSRPGTAGKGPRLYAAQRICGARKCRTVLSRYNRTELCWLHEPRHEYLSAVRGRRPAEVEVLDQLVAKVS*
Ga0105067_10056474	3300009812	Groundwater Sand	MSTMAIGLERDQLRLVGSRPGTAGKGPRLGDAGRICEASRCRTVLSRYNHAGLCWQHEPRHEYLSAVRGRRPAEVEVLSDLVP
Ga0105082_10369322	3300009814	Groundwater Sand	MSTMAIGLERDQLLLIGSRPGTAGKGPRLYAAERICGASKCRTVLSRYNRTELCWLHEPRHEYLSAVRGRRPAEIEVLDQLVAKVS*
Ga0105062_10021472	3300009817	Groundwater Sand	MSTMAIGLERDQLRLIGSRPGTAGKGPRLHAAERTCGASKCRTVLSRYNRTELCWLHEPRHEYLSAVRGRRPAEIEVLDQLVAKVS*
Ga0105078_10217501	3300009823	Groundwater Sand	QLLLIGSRPGTAGKGPRLYAAERICEAKKCRTVLSRYNRTELCWLHEPRHEYLSAVRGRRPAEIEVLDQLVAKVS*
Ga0105068_10165412	3300009836	Groundwater Sand	MSTMAIGLERDQLLLIGSRPGTAGKGPRLYAAERICGAKKCRTVLSRYNRTELCWLHEPRHEYLSAVRGRRPAEIEVLDQLVAKVS*
Ga0105058_10176892	3300009837	Groundwater Sand	MSTMAIGLERDQLRLIGSRPGTAGKGPRLYAAQRICGARKCRTVLSRYNRTELCWLHEPRHEYLSAVRGRRPAEVEVLDQLVAKVS*
Ga0105074_11200911	3300010029	Groundwater Sand	MSTMAIGLERDQLRLIGSRPGTAGKGPRLYGAERTCGAKKCRTVLSRYNRTELCWLHEPRHEYLSAVRGRRPAE
Ga0126315_101208941	3300010038	Serpentine Soil	MSTMAIGLERDQLRLVGSRPGTAGKGPSMGSAGRICEASRCRTVLSRYNHAGLCWQHEPRHEYLSAVRGRRPAEVEVLNDLVPKNDLVPRAS*
Ga0126308_100045764	3300010040	Serpentine Soil	MSTMAIGVERDQLRLAGSRPGTAGKGPSMGSAGRICEASRCRTVLSRYNHAELCWQHEPRHEYLSAVRGRRPAEVEVLNDLVPENDLVPTAS*
Ga0126380_121753272	3300010043	Tropical Forest Soil	MTTMAIGSERDQLRLVGSRPGSSGRGPAMQPAGRICEARRCRTVLSRYNHATLCWQHEPRHPYLSAVRGRRPAEVKVVDHLISEAS*
Ga0126382_117674891	3300010047	Tropical Forest Soil	GQMTQMAIGSDRDQLRLVGSRPGSSGKGPAMQAAGRICEAPRCRTVLSRYNHVDLCWQHEPRHPYLSAVRGRRPAEIEVVDDLMAAS*
Ga0126306_104359421	3300010166	Serpentine Soil	SRPGTAGKGPRLYGAERICGASKCRTVLSRYNRTELCWLHEPRHEYLSAVRGRRPAEVEVLDQLVAKVS*
Ga0126377_100772905	3300010362	Tropical Forest Soil	MTTMAIGSDRDQLRLVGSRPGSSGKGPVMQPAGRVCEARRCKTVLSRYNHATLCWQHEPRHPYLSAVRGRRPAEVEVVDDLISVAS*
Ga0126377_121871461	3300010362	Tropical Forest Soil	MSTMAIGSDRDQLRLVGSRPGSSGKGPPMQAAGRICEAPRCRTVLSRYNNSDLCWQHEPRHPYLSAVRGRRPAEIEVVDDLMVAAS*
Ga0137348_10456462	3300011398	Soil	MSTMAIGLERDQLRLIGSRPGTAGKGPRLHAAERICGASKCRTVLSRYNRTELCWLHEPRHEYLSAVRGRRPAEVEVLDQLVAKVS*
Ga0137424_10452062	3300011412	Soil	MSSMAIGLERDQLRLIGSRPGTAGKGPRLYAGQRTCGASKCRTVLSRYNHTDLCWLHEPRHEYLSAVRGRRPAEVEVLDQLVAKVS*
Ga0137344_11048971	3300012159	Soil	MSTTAIGLERDQLRLIGSRPGTAGKGPRLYAGQRICGASKCRTVLSRYNHTDLCWLHEPRHEYLSAVRGRRPAEVEVLDQLVAKVS*
Ga0137374_104020501	3300012204	Vadose Zone Soil	MSTMAIGLERDQLRLVGSRPGTAGKGPRMGDAGRICGASLCRTVLSRYNYSELCWQHEPRHEFLSAVRGRRPAEVEVLDDLVPGDDLVTKAS*
Ga0137369_100489016	3300012355	Vadose Zone Soil	MSQMAIGLERDQLRLIGSRPGTAGKGPRLNTAGRVCGTPRCRTVLSRYNHSELCWQHEPRHEYLSAVRGRRPAEVEVLNDLVPQAS*
Ga0137368_100548571	3300012358	Vadose Zone Soil	STMAIGLERDQLRLVGSRPGTAGKGPRLGDAGRICGASRCRTVLSRYNYSELCWQHEPRHEFLSAVRGRRPAEVEVLDDLVPGDDLVTKAS*
Ga0137375_110199051	3300012360	Vadose Zone Soil	MSQMAIGLERDQLRLIGSRPGTAGKGPRLGDAGRICEASRCRTVLSRYNYSELCWQHEPRHEFLSAVRGRRPAEVEVLDDLVPGDDLVTKAS*
Ga0126375_102529051	3300012948	Tropical Forest Soil	MTTMAIGSDRDQLRLVGSRPGSSGKGPAMQPAGRVCEARRCKTVLSRYNHATLCWQHEPRHPYLSAVRGRRPAEVEVVDDLISVAS*
Ga0163163_106014303	3300014325	Switchgrass Rhizosphere	MSQMAIGLERDQLRLIGSRPGTAGKGPRMNSAGRICGAARCRTVLSRYNHSELCWQHEPRHEYLSAVRGR
Ga0120193_100041873	3300014965	Terrestrial	MSTMAIGLERDQLRLIGSRPGTAGKGPRMGAAGRICEASRCRTVLSRYNHAGLCWQHEPRHEYLSAVRGRRPAEVEVLSDLVPKSDLVPRAS*
Ga0180093_10292721	3300015258	Soil	MSTMAIGLERDQLRLIGSRPGTAGKGPRLYAAERICGASKCRTVLSRYNRTELCWLHEPRHEYLSAVRGRRPAEVEVLDQLVAKVS*
Ga0132258_125222682	3300015371	Arabidopsis Rhizosphere	MGTMAIGLERDQLRLIGSRPGTAGKGPRMGAAGRICEASRCRTVLSRYNHAGLCWQHEPRHEYLSAVRGRRPAEVEVLSDLVPRAS*
Ga0132257_1035082701	3300015373	Arabidopsis Rhizosphere	MSQMAIGLERDQLRLIGSRPGTAGKGPRMGAAGRICEASRCRTVLSRYNHAGLCWQHEPRHEYLSAVRGRRPAEVEV
Ga0132255_1024659653	3300015374	Arabidopsis Rhizosphere	MSTMAIGSERDQLRLVGSRPGSSGKGPALQPAGRICEAPRCRTVLSRYNHATLCWQHEPRHPYLSAVRGRRPAEVEVVDDLISVAS*
Ga0163161_104694553	3300017792	Switchgrass Rhizosphere	MSQMAIGLERDQLRLMGSRPGTAGKGPRMGAAGRICEASRCRTVLSRYNHAGLCWQHEPRHEYLSAVRGRRPAEVEVLNDLVPKAS
Ga0190266_108647862	3300017965	Soil	MSTMAIGVERDQLRLIGSRPGTAGKGPRLYGAERICGAKKCRTVLSRYNRTELCWLHEPRHEYLSAVRGRRPAEVEVLDQLVAKVS
Ga0184610_10042522	3300017997	Groundwater Sediment	MSTMAIGLERDQLRLIGSRPGTAGKGPRLHAAERTCGASKCRTVLSRYNHTELCWLHEPRHEYLSAVRGRRPAEVEVLDQLVAKVS
Ga0184608_100006744	3300018028	Groundwater Sediment	MSSMAIGLERDQLRLIGSRPGTAGKGPHLHAAERICGASKCRTVLSRYNHTDLCWLHEPRHEYLSAVRGRRPAEVEVLDQLVAKVS
Ga0184638_10535142	3300018052	Groundwater Sediment	MSSMAIGLERDQLRLIGSRPGTAGKGPRLYGAERTCGASKCRTVLSRYNHTELCWLHEPRHEYLSAVRGRRPAEVEVLEQLVPAKAS
Ga0184638_11040693	3300018052	Groundwater Sediment	MSSMAIGLERDQLRLIGSRPGTAGKGPRLYAGQRICGASKCRTVLSRYNHTDLCWLHEPRHEYLSAVRGRRPAEVEVLDQLVAKVS
Ga0184638_11224143	3300018052	Groundwater Sediment	RLIGSRPGTAGKGPHLHAAERICGASKCRTVLSRYNHTDLCWLHEPRHEYLSAVRGRRPAEVEVLDQLVAKVS
Ga0184626_100246012	3300018053	Groundwater Sediment	MSTMAIGLERDQLLLSGSRPGTAGKGPRLYAAERICGASKCRTVLSRYNRTELCWLHEPRHEYLSAVRGRRPAEIEVLDQLVAKVS
Ga0184623_102057571	3300018056	Groundwater Sediment	MSTMAIGLERDQLLLIGSRPGTAGKGPRLYAAQRTCGASKCRTVLSRYNRTELCWLHEPRHEYLSAVRGRRPAEVEVLDQLVAKVS
Ga0184637_103501642	3300018063	Groundwater Sediment	MSTMAIGLERDQLRLIGSRPGTAGKGPRLHDAERICGASKCRTVLSRYNHTELCWLHEPRHEYLSAVRGRRPAEVEVLDQLVAQVS
Ga0184635_101759461	3300018072	Groundwater Sediment	MSSMAIGLERDQLRLIGSRPGTAGKGPRLYGAERTCGASKCRTVLSRYNHTDLCWLHEPRHEYLSAVRGRRPAEVEVLDQLVAKVS
Ga0184624_100698661	3300018073	Groundwater Sediment	MSTMAIGLERDQLRLIGSRPGTAGKGPRMGAAGRICEASRCRTVLSRYNHAGLCWQHEPRHEYLSAVRGRRPAEVEVLNDL
Ga0184640_102139162	3300018074	Groundwater Sediment	MSTMAIGLERDQLRLIGSRPGTAGKGPRMGAAGRICEASRCRTVLSRYNHAGLCWQHEPRHEYLSAVRGRRPAEVEVL
Ga0184632_100135482	3300018075	Groundwater Sediment	MSSMAIGLERDQLRLIGSRPGTAGKGPRLYGAERTCGASKCRTLLSRYNHTELCWLHEPRHEYLSAVRGRRPAEVEVLDQLVAKVS
Ga0184632_101686033	3300018075	Groundwater Sediment	MSSMAIGLERDQLRLIGSRPGTAGKGPRLYAGQRICGASKCRTVLSRYNHTDLCRLHEPRHEYLSAVRGRRPAEVEVLDQLVAKVS
Ga0184632_102926801	3300018075	Groundwater Sediment	MSTMAIGLERDQLLLIGSRPGTAGKGPRLYAGERICGAKKCRTVLSRYNRTELCWLHEPRHEYLSAVRGRRPAEVEVLDQLVAKVS
Ga0184609_100642352	3300018076	Groundwater Sediment	MSTTAIGLERDQLLLIGSRPGTAGKGPRLYAAERTCGASKCRTVLSRYNRTELCWLHEPRHEYLSAVRGRRPAEVEVLDQLVAKVS
Ga0184609_103785841	3300018076	Groundwater Sediment	MSTMAIGLERDQLRLIGSRPGTAGKGPRLYGAERTCGASKCRTLLSRYNHTELCWLHEPRHEYLSAVRGRRPAEVEVLDQLVAKVS
Ga0184609_105253522	3300018076	Groundwater Sediment	MSTMAIGLERDQLRLIGSRPGTAGKGPRLHAAERTCGASKCRTVLSRYNHTELCWLHEPRHEYLSAVRGRRPAEVEVLEQLVPAKAS
Ga0184612_100126312	3300018078	Groundwater Sediment	MSTMAIGLERDQLLLIGSRPGTAGKGPRLYAAERICGASKCRTVLSRYNRTELCWLHEPRHEYLSAVRGRRPAEIEVLDQLVAKVS
Ga0184612_100650433	3300018078	Groundwater Sediment	ERDQLRLIGSRPGTAGKGPRLYGAERTCGASKCRTVLSRYNHTELCWLHEPRHEYLSAVRGRRPAEVEVLEQLVPAKAS
Ga0184627_103854752	3300018079	Groundwater Sediment	MSTMAIGLERDQLRLIGSRPGTAGKGPRLHDAERICGASKCRTVLSRYNHTELCWLHEPRHEYLSAVRGRRPAEVEVLDQLVAKVS
Ga0184625_100758352	3300018081	Groundwater Sediment	MSTMAIGLERDQLRLIGSRPGTAGKGPRMGAAGRICEASRCRTVLSRYNHAGLCWQHEPRHEYLSAVRGRRPAEVEVLSDLVPKAS
Ga0190268_100066186	3300018466	Soil	MSTMAIGLERDQLRLIGSRPGTAGKGARLYGAERMCGAKKCRTVLSRYNRTELCWLHEPRHEYLSAVRGRRPAEVEVVDQLVAKVS
Ga0190268_105394952	3300018466	Soil	MSTMATGLERDQLRLIGSRPGTAGKGPRLYASERICGASKCRTVLSRYNRTELCWLHEPRHEYLSAVRGRRPAEVEVLDQLVAKVS
Ga0190270_123391211	3300018469	Soil	MSTMAIGLERDQLLLIGSRPGTAGKGPRLYAAERICGAKKCRTVLSRYNRTELCWLHEPRHEYLSAVRGRR
Ga0190270_129824221	3300018469	Soil	MSQMAIGLERDQLRLIGSRPGTAGKGPRMNTAGRICDAPRCRTVLSRYNHSELCWQHEPRHEYLSAVRGRRPLEVEVLNDLVPKAS
Ga0190274_102495253	3300018476	Soil	MSTMAIGLERDQLRLVGSRPGTAGKGPRMGAAGRICEVSRCRTVLSRYNDAELCWQHEPRHEYLSAVRGRRPAEVEVLNDLVPKNDLVPTAF
Ga0184646_12128861	3300019259	Groundwater Sediment	MSTMAIGLERDQLRLIGSRPGTAGKGPRLYGAERTCGASKCRTLLSRYNHTELCWLHEPRHEYLSAVRGRRPAEVEVLDQLVAK
Ga0193741_11129552	3300019884	Soil	MSSMAIGLERDQLRLIGSRPGTAGKGPRLYAGQRTCGASKCRTVLSRYNHTDLCWLHEPRHEYLSAVRGRRPAEVEVLDQLVAKVS
Ga0193739_10392761	3300020003	Soil	MSTMAIGLERDQLRLIGSRPGTAGKGPRRYAAERTCGASKCRTVLSRYNRTELCWLHEPRHEYLSAVRGRRPAEIEVLDQLVAKVS
Ga0193739_11274572	3300020003	Soil	MSTTAIGLERDQLRLIGSRPGTAGKGPRLYGAERTCGASKCRTVLSRYNRAELCWLHEPRHEYLSAVRGRRPAEVEVLDQLVAKVS
Ga0193738_11483361	3300020020	Soil	MSTTAIGLERDQLRLIGSRPGTAGKGPRRYGAERTCGASKCRTVLSRYNRAELCWLHEPRHEYLSAVRGRRPAEVEVLDQLVAKVS
Ga0210379_101202032	3300021081	Groundwater Sediment	MSTMAIGLERDQLRLIGSRPGTAGKGPRLYGAERTCGASKCRTVLSRYNHTELCWLHEPRHEYLSAVRGRRPAEVEVLDQLVAKVS
Ga0210380_101082211	3300021082	Groundwater Sediment	MSQMAIGLERDQLRLIGSRPGTAGKGPRMNTTGRICGAARCRTVLSRYNHSELCWQHEPRHEYLSAVRGRRPAEVEVLNDLVPKAS
Ga0193737_10280592	3300021972	Soil	MSSMAIGLERDQLRLIGSRPGTAGKGPRRYAAERTCGASKCRTVLSRYNHTDLCWLHEPRHEYLSAVRGRRPAEVEVLDQLVAKVS
Ga0222625_16356401	3300022195	Groundwater Sediment	MAIGLERDQLRLIGSRPGTAGKGPHLHAAERICGASKCRTVLSRYNHTDLCWLHEPRHEYLSAVRGRRPAEVEVLDQLVAKVS
Ga0224452_11343132	3300022534	Groundwater Sediment	MSTMAIGLERDQLRLVGSRPGTAGKGPRLGVAGRICEASRCRTVLSRYNRSELCWQHLPRHEYLSAVRGRRPAEVEVLNDLVPKAS
Ga0207647_101605862	3300025904	Corn Rhizosphere	MSTMAIGLERDQLRLMGSRPGTAGKGPRMGAAGRICEASRCRTVLSRYNHAGLCWQHEPRHEYLSAVRGRRPAEVEVLSQLVPRAS
Ga0207659_101943152	3300025926	Miscanthus Rhizosphere	MSTMAIGLERDQLRLMGSRPGTAGKGPRMGAAGRICEASRCRTVLSRYNHVGLCWQHEPRHEYLSAVRGRRPAEVEVLNDLVPKAS
Ga0209896_10216311	3300027006	Groundwater Sand	MSTMAIGLERDQLRLVGSRPGTAGKGPRMGAAGRICEASRCRTVLSRYNHAGLCWQHEPRHEYLSAVRGRRPAEVEVLSDLVPKAS
Ga0209878_10068812	3300027163	Groundwater Sand	MSTMATGLERDQLRLIGSRPGTAGKGPRLYGAERTCGAKKCRTVLSRYNRTELCWLHEPRHEYLSAVRGRRPAEVEVLDQLVAKVS
Ga0209842_10030234	3300027379	Groundwater Sand	MSTMAIGLERDQLRLIGSRPGTAGKGPRLHTGQRICGASKCRTVLSRYNHTELCWLHEPRHEYLSAVRGRRPAEIEVLDQLVAKVS
Ga0207981_10031592	3300027560	Soil	MSTTAIGLERDQLRLVGSRPGTAGKGPRMGAAGRICEASRCRTVLSRYNHAGLCWQHEPRHEYLSAVRGRRPAEVEVLSDLVPKAS
Ga0209887_10051971	3300027561	Groundwater Sand	SRPGTAGKGPRMGAAGRICEASRCRTVLSRYNHAGLCWQHEPRHEYLSAVRGRRPAEVEVLSDLVPKAS
Ga0209887_10056815	3300027561	Groundwater Sand	MSTMAIGLERDQLRLIGSRPGTAGKGPRLHAAERTCAASKCRTVLSRYNRTELCWLHEPRHEYLSAVRGRRPAEIEVLDQLVAKVS
Ga0209887_10075864	3300027561	Groundwater Sand	RLIGSRPGTAGKGPRLYGAERTCGAKKCRTVLSRYNRTELCWLHEPRHEYLSAVRGRRPAEVEVLDQLVAKVS
Ga0209874_10299001	3300027577	Groundwater Sand	GRMSTMAIGLERDQLRLVGSRPGTAGKGPRMGAAGRICEASRCRTVLSRYNHAGLCWQHEPRHEYLSAVRGRRPAEVEVLNDLVPKAS
Ga0256866_10050872	3300027650	Soil	MSTMAIGLERDQLRLIGSRPGTAGKGPRLYGAERTCRASKCRTVLSRYNRTELCWLHEPRHEYLSAVRGRRPAEIEVLDQLVAKVS
Ga0209814_100011668	3300027873	Populus Rhizosphere	MSTMAIGLERDQLRLMGSRPGTAGKGPRMGAAGRICEASRCRTVLSRYNHAGLCWQHEPRHEYLSAVRGRRPAEVEVLSELVPRAS
Ga0209814_102429641	3300027873	Populus Rhizosphere	MTTMAIGSERDQLRLVGSRPGSSGKGPAMQPAGRICEAPRCMTVLSRYNHAPLCWQHEPRHPYLSAVRGRRPAEVEVVDDLISVAS
Ga0207428_100941994	3300027907	Populus Rhizosphere	MSTMAIGSERDQLRLVGSRPGSSGKGPAMQPAGRICEAPRCMTVLSRYNHAPLCWQHEPRHPYLSAVRGRRPAEVEVVDDLISVAS
Ga0209382_100629043	3300027909	Populus Rhizosphere	MSTMAIGVERDQLRLIGSRPGTAGKGPRLYAAERTCGASKCRTVLSRYNRTELCWLHEPRHEYLSAVRGRRPAEVEVLDQLVAKVS
Ga0209382_107355122	3300027909	Populus Rhizosphere	MTTMAIGSERDQLRLMGSRPGSSGKGPAMQAAGRICEARRCRTVLSRYNHATLCWQHEPRHPYLSAVRGRRPAEVEVVDDLITVAS
Ga0209860_10540721	3300027949	Groundwater Sand	MSTMAIGLERDQLRLIGSRPGTAGKGPRLHAAERTCRASKCRTVLSRYNRTELCWLHEPRHEYLSAVRGRRPAEIEVLDQLVAKVS
Ga0209889_11086891	3300027952	Groundwater Sand	MSTMAIGLERDQLRLVGSRPGTAGKGPRMGAAGRICEASRCRTVLSRYNYSELCWQHEPRHEFLSAVRGRRPAEVEVLDDLAPSNDLVTQAS
Ga0209820_10513002	3300027956	Freshwater Sediment	MSTMATGLERDQLRLIGSRPGTAGKGPRLYAAQRTCGASKCRTVLSRYNRTELCWLHEPRHEYLSAVRGRRPAEVEVLDQLVAKVS
Ga0307285_102377531	3300028712	Soil	MSQMAIGLERDQLRLIGSRPGTAGKGPRMGAAGRICEASRCRTVLSRYNHAGLCWQHEPRHEYLSAVRGRRPAEVEVLNDLVPKAS
Ga0307282_100571334	3300028784	Soil	MSTMAIGLERDQLRLVGSRPGTAGKGPRMGAAGRICEASRCRTVLSRYNHAGLCWQHEPRHEYLSAVRGRRPAEVEVLNDLVPKAS
Ga0307281_101524922	3300028803	Soil	LERDQLRLIGSRPGTAGKGPRMNTTGRICGAARCRTVLSRYNHSELCWQHEPRHEYLSAVRGRRPAEVEVLNDLVPKAS
Ga0247824_105818541	3300028809	Soil	LRLVGSRPGTAGKGPRMGAAGRICEASRCRTVLSRYNHAGLCWQHEPRHEYLSAVRGRRPAEVEVLSDLVPKAS
Ga0307296_100904691	3300028819	Soil	LRLIGSRPGTAGKGPRMGAAGRICEASRCRTVLSRYNHAGLCWQHEPRHEYLSAVRGRRPAEVEVLSDLVPKAS
Ga0247826_105119012	3300030336	Soil	MSTMAIGLERDQLRLIGSRPGTAGKGPRMGAAGRICEASRCRTVLSRYNHVGLCWQHEPRHEYLSAVRGRRPAEVEVLSDLVPKAS
Ga0299906_100728704	3300030606	Soil	MSTMAIGLERDQLRLVGSRPGTAGKGPRRGAAGRICEVSRCRTVLSRYNDAELCWQHEPRHEYLSAVRGRRPAEVEVLNDLVPKNDLVPTAF
Ga0307409_1006095252	3300031995	Rhizosphere	MSTMAIGGERDQLRLVGSRPGTAGKGPSMGSAGRICEASRCRTVLSRYNHAELCWQHEPRHEYLSAVRGRRPAEVEVLNDLVPENDLVPTAS
Ga0247829_103072402	3300033550	Soil	MSTMAIGLERDQLRLMGSRPGTAGKGPRMGAAGRICEASRCRTVLSRYNHAGLCWQHEPRHEYLSAVRGRRPAEVEVLSELVHRAS
Ga0364937_007431_1151_1411	3300034113	Sediment	MSTMAIGVERDQLRLIGSRPGTAGKGPRLYAAERICGASKCRTVLSRYNRTELCWLHEPRHEYLSAVRGRRPAEVEVLDQLVAKVS
Ga0364945_0104715_575_829	3300034115	Sediment	MSTMAIGVERDQLRLIGSRPGTAGKGPRLYAAERICGASKCRTVLSRYNRTELCWLHEPRHEYLSAVRGRRPAEVEVLDQLVAKV
Ga0364925_0036846_855_1115	3300034147	Sediment	MSTMAIGLERDQLRLIGSRPGTAGKGPRLYAAERICGASKCRTVLSRYNRTELCWLHEPRHEYLSAVRGRRPAEVEVLDQLVAKVS
Ga0364935_0022543_1265_1516	3300034151	Sediment	MAIGVERDQLRLIGSRPGTAGKGPRLYAAERICGASKCRTVLSRYNRTELCWLHEPRHEYLSAVRGRRPAEVEVLDQLVAKVS
Ga0364931_0053429_206_460	3300034176	Sediment	MAIGLERDQLRLIGSRPGTAGKGPRLYAGQRICGASKCRTVLSRYNHTDLCWLHEPRHEYLSAVRGRRPAEVEVLEQLVPAKAS
Ga0364943_0009474_2641_2886	3300034354	Sediment	GLERDQLRLIGSRPGTAGKGPRLYAGQRICGASKCRTVLSRYNHTDLCWLHEPRHEYLSAVRGRRPAEVEVLEQLVPAKAS
Ga0364943_0378272_3_236	3300034354	Sediment	RDQLRLIGSRPGTAGKGPRMGAAGRICEASRCRTVLSRYNHAGLCWQHEPRHEYLSAVRGRRPAEVEVLSDLVPKAS
Ga0364941_164697_198_458	3300034417	Sediment	MSTMAIGLERDQLRLIGSRPGTAGKGPRMNTTGRICGAPRCRTILSRYNHSELCWQHEPRHEYLSAVRGRRPAEVEVLNDLVPKAS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F052026

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences