Metagenome / Metatranscriptome Family F052099

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F052099
Family Type	Metagenome / Metatranscriptome
Number of Sequences	143
Average Sequence Length	60 residues
Representative Sequence	MPSVAPAARVAFVVEAISGLQRLQREMARLSQRDENYESKKRALQTAIQELRKMISAKA
Number of Associated Samples	106
Number of Associated Scaffolds	143

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	73.43 %
% of genes near scaffold ends (potentially truncated)	24.48 %
% of genes from short scaffolds (< 2000 bps)	74.13 %
Associated GOLD sequencing projects	101
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.67

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (59.441 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (15.385 % of family members)
Environment Ontology (ENVO)	Unclassified (18.881 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (39.860 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 55.17% β-sheet: 0.00% Coil/Unstructured: 44.83%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.67
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.67
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 143 Family Scaffolds
PF00069	Pkinase	4.20
PF03551	PadR	3.50
PF00072	Response_reg	2.80
PF00903	Glyoxalase	2.10
PF13474	SnoaL_3	1.40
PF03544	TonB_C	1.40
PF02371	Transposase_20	1.40
PF00665	rve	1.40
PF07508	Recombinase	1.40
PF08238	Sel1	0.70
PF13426	PAS_9	0.70
PF04055	Radical_SAM	0.70
PF13276	HTH_21	0.70
PF00571	CBS	0.70
PF16576	HlyD_D23	0.70
PF13545	HTH_Crp_2	0.70
PF13570	PQQ_3	0.70
PF01828	Peptidase_A4	0.70
PF06966	DUF1295	0.70
PF04664	OGFr_N	0.70
PF15780	ASH	0.70
PF13604	AAA_30	0.70
PF02586	SRAP	0.70
PF04226	Transgly_assoc	0.70
PF08327	AHSA1	0.70
PF12779	WXXGXW	0.70
PF00115	COX1	0.70
PF03992	ABM	0.70
PF07110	EthD	0.70
PF00215	OMPdecase	0.70
PF12535	Nudix_N	0.70
PF01011	PQQ	0.70
PF00239	Resolvase	0.70
PF13641	Glyco_tranf_2_3	0.70
PF00296	Bac_luciferase	0.70
PF13427	DUF4111	0.70
PF02321	OEP	0.70
PF07676	PD40	0.70
PF14534	DUF4440	0.70
PF09723	Zn-ribbon_8	0.70
PF00210	Ferritin	0.70
PF12681	Glyoxalase_2	0.70
PF13683	rve_3	0.70
PF02518	HATPase_c	0.70
PF05649	Peptidase_M13_N	0.70
PF05973	Gp49	0.70
PF01545	Cation_efflux	0.70
PF01425	Amidase	0.70

COG ID	Name	Functional Category	% Frequency in 143 Family Scaffolds
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	16.78
COG1695	DNA-binding transcriptional regulator, PadR family	Transcription [K]	3.50
COG1733	DNA-binding transcriptional regulator, HxlR family	Transcription [K]	3.50
COG1846	DNA-binding transcriptional regulator, MarR family	Transcription [K]	3.50
COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	Replication, recombination and repair [L]	2.10
COG0810	Periplasmic protein TonB, links inner and outer membranes	Cell wall/membrane/envelope biogenesis [M]	1.40
COG1538	Outer membrane protein TolC	Cell wall/membrane/envelope biogenesis [M]	1.40
COG2801	Transposase InsO and inactivated derivatives	Mobilome: prophages, transposons [X]	1.40
COG2826	Transposase and inactivated derivatives, IS30 family	Mobilome: prophages, transposons [X]	1.40
COG3316	Transposase (or an inactivated derivative), DDE domain	Mobilome: prophages, transposons [X]	1.40
COG3547	Transposase	Mobilome: prophages, transposons [X]	1.40
COG4584	Transposase	Mobilome: prophages, transposons [X]	1.40
COG0053	Divalent metal cation (Fe/Co/Zn/Cd) efflux pump	Inorganic ion transport and metabolism [P]	0.70
COG0154	Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit or related amidase	Translation, ribosomal structure and biogenesis [J]	0.70
COG1230	Co/Zn/Cd efflux system component	Inorganic ion transport and metabolism [P]	0.70
COG2020	Protein-S-isoprenylcysteine O-methyltransferase Ste14	Posttranslational modification, protein turnover, chaperones [O]	0.70
COG2135	ssDNA abasic site-binding protein YedK/HMCES, SRAP family	Replication, recombination and repair [L]	0.70
COG2141	Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)	Coenzyme transport and metabolism [H]	0.70
COG2261	Uncharacterized membrane protein YeaQ/YmgE, transglycosylase-associated protein family	General function prediction only [R]	0.70
COG2452	Predicted site-specific integrase-resolvase	Mobilome: prophages, transposons [X]	0.70
COG3590	Predicted metalloendopeptidase	Posttranslational modification, protein turnover, chaperones [O]	0.70
COG3657	Putative component of the toxin-antitoxin plasmid stabilization module	Defense mechanisms [V]	0.70
COG3752	Steroid 5-alpha reductase family enzyme	General function prediction only [R]	0.70
COG3965	Predicted Co/Zn/Cd cation transporter, cation efflux family	Inorganic ion transport and metabolism [P]	0.70
COG4679	Phage-related protein gp49, toxin component of the Tad-Ata toxin-antitoxin system	Defense mechanisms [V]	0.70

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	59.44 %
Unclassified	root	N/A	40.56 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	59.44 %
Unclassified	root	N/A	40.56 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	59.44 %
Unclassified	root	N/A	40.56 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.56 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	37.76 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.40 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.70 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.70 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.56 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	15.38 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	5.59 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.40 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.70 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.70 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.56 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	14.69 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	4.20 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.40 %
Acidobacteria bacterium 13_2_20CM_56_17	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_2_20CM_56_17	0.70 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	0.70 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.70 %
Gemmatimonadetes	class	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes	0.70 %
unclassified Terriglobia	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.56 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	14.69 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2.80 %
unclassified Terriglobales	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales	1.40 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.40 %
Acidobacteriia bacterium SbA2	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium SbA2	0.70 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.70 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	0.70 %
Gemmatimonadales	order	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales	0.70 %
Acidobacteria bacterium 13_2_20CM_56_17	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_2_20CM_56_17	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.56 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	14.69 %
Acidobacteriales bacterium 13_1_40CM_3_55_5	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_1_40CM_3_55_5	1.40 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.40 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	0.70 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.70 %
Gemmatimonadaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	0.70 %
Acidobacteriia bacterium SbA2	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium SbA2	0.70 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.70 %
Acidobacteria bacterium 13_2_20CM_56_17	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_2_20CM_56_17	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.56 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	14.69 %
Acidobacteriales bacterium 13_1_40CM_3_55_5	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_1_40CM_3_55_5	1.40 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.40 %
Gemmatirosa	genus	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa	0.70 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	0.70 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.70 %
Acidobacteriia bacterium SbA2	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium SbA2	0.70 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.70 %
Acidobacteria bacterium 13_2_20CM_56_17	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_2_20CM_56_17	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.56 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	14.69 %
Acidobacteriales bacterium 13_1_40CM_3_55_5	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_1_40CM_3_55_5	1.40 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.40 %
Gemmatirosa kalamazoonesis	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	0.70 %
Candidatus Koribacter versatilis Ellin345	isolate	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis → Candidatus Koribacter versatilis Ellin345	0.70 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.70 %
Acidobacteriia bacterium SbA2	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium SbA2	0.70 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.70 %
Acidobacteria bacterium 13_2_20CM_56_17	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_2_20CM_56_17	0.70 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002914\|JGI25617J43924_10138379	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	846	Open in IMG/M
3300004152\|Ga0062386_101744153	Not Available	519	Open in IMG/M
3300004479\|Ga0062595_100089680	All Organisms → cellular organisms → Bacteria	1591	Open in IMG/M
3300005332\|Ga0066388_100075166	Not Available	3712	Open in IMG/M
3300005332\|Ga0066388_100944539	All Organisms → cellular organisms → Bacteria → Acidobacteria	1434	Open in IMG/M
3300005337\|Ga0070682_102051626	All Organisms → cellular organisms → Bacteria → Acidobacteria	504	Open in IMG/M
3300005434\|Ga0070709_10522975	Not Available	904	Open in IMG/M
3300005435\|Ga0070714_100301894	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1493	Open in IMG/M
3300005435\|Ga0070714_100894919	Not Available	862	Open in IMG/M
3300005435\|Ga0070714_101749148	Not Available	607	Open in IMG/M
3300005437\|Ga0070710_11206161	All Organisms → cellular organisms → Bacteria → Acidobacteria	559	Open in IMG/M
3300005445\|Ga0070708_100047963	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3775	Open in IMG/M
3300005458\|Ga0070681_10585649	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1030	Open in IMG/M
3300005994\|Ga0066789_10024949	All Organisms → cellular organisms → Bacteria	2650	Open in IMG/M
3300006052\|Ga0075029_100002299	All Organisms → cellular organisms → Bacteria → Acidobacteria	10858	Open in IMG/M
3300006052\|Ga0075029_100007483	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	6008	Open in IMG/M
3300006052\|Ga0075029_100063479	All Organisms → cellular organisms → Bacteria	2158	Open in IMG/M
3300006052\|Ga0075029_100417225	Not Available	875	Open in IMG/M
3300006052\|Ga0075029_100509084	Not Available	796	Open in IMG/M
3300006052\|Ga0075029_101182059	Not Available	534	Open in IMG/M
3300006055\|Ga0097691_1026706	All Organisms → cellular organisms → Bacteria → Acidobacteria	2357	Open in IMG/M
3300006059\|Ga0075017_100958388	Not Available	665	Open in IMG/M
3300006102\|Ga0075015_100728574	Not Available	590	Open in IMG/M
3300006175\|Ga0070712_100067134	All Organisms → cellular organisms → Bacteria	2551	Open in IMG/M
3300006893\|Ga0073928_10017600	All Organisms → cellular organisms → Bacteria → Acidobacteria	7563	Open in IMG/M
3300006893\|Ga0073928_10045246	All Organisms → cellular organisms → Bacteria	4024	Open in IMG/M
3300007265\|Ga0099794_10734482	Not Available	527	Open in IMG/M
3300009029\|Ga0066793_10363117	Not Available	833	Open in IMG/M
3300009029\|Ga0066793_10417727	All Organisms → cellular organisms → Bacteria → Acidobacteria	769	Open in IMG/M
3300009038\|Ga0099829_11394018	Not Available	579	Open in IMG/M
3300009088\|Ga0099830_11207750	Not Available	628	Open in IMG/M
3300009089\|Ga0099828_10438803	All Organisms → cellular organisms → Bacteria	1177	Open in IMG/M
3300009090\|Ga0099827_10181474	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1741	Open in IMG/M
3300009524\|Ga0116225_1446002	Not Available	575	Open in IMG/M
3300009632\|Ga0116102_1029998	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1819	Open in IMG/M
3300009639\|Ga0116122_1085770	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1032	Open in IMG/M
3300009792\|Ga0126374_10855408	All Organisms → cellular organisms → Bacteria	700	Open in IMG/M
3300009839\|Ga0116223_10369395	Not Available	847	Open in IMG/M
3300010339\|Ga0074046_10000775	All Organisms → cellular organisms → Bacteria	29344	Open in IMG/M
3300010339\|Ga0074046_10001222	All Organisms → cellular organisms → Bacteria	23700	Open in IMG/M
3300010339\|Ga0074046_10006317	All Organisms → cellular organisms → Bacteria → Acidobacteria	9321	Open in IMG/M
3300010343\|Ga0074044_10000697	All Organisms → cellular organisms → Bacteria	31479	Open in IMG/M
3300010343\|Ga0074044_10117598	All Organisms → cellular organisms → Bacteria	1785	Open in IMG/M
3300010361\|Ga0126378_13328861	Not Available	511	Open in IMG/M
3300010366\|Ga0126379_10187977	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1972	Open in IMG/M
3300010366\|Ga0126379_10410642	All Organisms → cellular organisms → Bacteria → Acidobacteria	1404	Open in IMG/M
3300010366\|Ga0126379_10921568	Not Available	977	Open in IMG/M
3300010379\|Ga0136449_100658478	Not Available	1768	Open in IMG/M
3300010396\|Ga0134126_12056894	All Organisms → cellular organisms → Bacteria → Acidobacteria	624	Open in IMG/M
3300011269\|Ga0137392_10504100	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1005	Open in IMG/M
3300011271\|Ga0137393_11531657	Not Available	556	Open in IMG/M
3300012096\|Ga0137389_10462801	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1086	Open in IMG/M
3300012096\|Ga0137389_10690849	Not Available	877	Open in IMG/M
3300012189\|Ga0137388_10216792	All Organisms → cellular organisms → Bacteria	1731	Open in IMG/M
3300012189\|Ga0137388_10647458	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_2_20CM_56_17	982	Open in IMG/M
3300012189\|Ga0137388_10875118	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	831	Open in IMG/M
3300012200\|Ga0137382_11175060	Not Available	546	Open in IMG/M
3300012203\|Ga0137399_11069500	Not Available	679	Open in IMG/M
3300012212\|Ga0150985_119738023	Not Available	920	Open in IMG/M
3300012917\|Ga0137395_10035457	Not Available	3045	Open in IMG/M
3300012917\|Ga0137395_10098499	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1939	Open in IMG/M
3300012917\|Ga0137395_10169736	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1504	Open in IMG/M
3300012923\|Ga0137359_10214125	Not Available	1721	Open in IMG/M
3300012923\|Ga0137359_10758226	Not Available	843	Open in IMG/M
3300012957\|Ga0164303_11062329	Not Available	581	Open in IMG/M
3300014162\|Ga0181538_10086486	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1869	Open in IMG/M
3300014164\|Ga0181532_10534655	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	640	Open in IMG/M
3300014165\|Ga0181523_10198083	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis → Candidatus Koribacter versatilis Ellin345	1164	Open in IMG/M
3300014167\|Ga0181528_10621490	Not Available	600	Open in IMG/M
3300014502\|Ga0182021_12700898	Not Available	597	Open in IMG/M
3300015193\|Ga0167668_1016900	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1639	Open in IMG/M
3300015193\|Ga0167668_1021299	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium SbA2	1451	Open in IMG/M
3300017821\|Ga0187812_1226523	Not Available	596	Open in IMG/M
3300017823\|Ga0187818_10122568	Not Available	1127	Open in IMG/M
3300017925\|Ga0187856_1003003	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	12040	Open in IMG/M
3300017931\|Ga0187877_1078961	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1415	Open in IMG/M
3300017933\|Ga0187801_10359880	Not Available	600	Open in IMG/M
3300017942\|Ga0187808_10516528	Not Available	554	Open in IMG/M
3300017943\|Ga0187819_10125460	All Organisms → cellular organisms → Bacteria → Acidobacteria	1531	Open in IMG/M
3300017943\|Ga0187819_10499408	All Organisms → cellular organisms → Bacteria	694	Open in IMG/M
3300017955\|Ga0187817_10418716	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	855	Open in IMG/M
3300017988\|Ga0181520_11024350	Not Available	545	Open in IMG/M
3300017996\|Ga0187891_1125759	Not Available	936	Open in IMG/M
3300018005\|Ga0187878_1174172	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	819	Open in IMG/M
3300018006\|Ga0187804_10109165	Not Available	1142	Open in IMG/M
3300018012\|Ga0187810_10487413	Not Available	525	Open in IMG/M
3300018020\|Ga0187861_10414202	Not Available	563	Open in IMG/M
3300018025\|Ga0187885_10249432	Not Available	811	Open in IMG/M
3300018037\|Ga0187883_10011212	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	5072	Open in IMG/M
3300018431\|Ga0066655_10502227	Not Available	804	Open in IMG/M
3300018468\|Ga0066662_11160673	Not Available	778	Open in IMG/M
3300019242\|Ga0181502_1193817	Not Available	523	Open in IMG/M
3300019888\|Ga0193751_1013740	All Organisms → cellular organisms → Bacteria → Acidobacteria	4179	Open in IMG/M
3300020579\|Ga0210407_10071524	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2605	Open in IMG/M
3300020579\|Ga0210407_10797696	All Organisms → cellular organisms → Bacteria	728	Open in IMG/M
3300020579\|Ga0210407_11461046	Not Available	505	Open in IMG/M
3300020581\|Ga0210399_10073528	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2769	Open in IMG/M
3300021168\|Ga0210406_10015742	All Organisms → cellular organisms → Bacteria	7193	Open in IMG/M
3300021168\|Ga0210406_10023903	All Organisms → cellular organisms → Bacteria → Acidobacteria	5637	Open in IMG/M
3300021171\|Ga0210405_10239552	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	1436	Open in IMG/M
3300022557\|Ga0212123_10004308	All Organisms → cellular organisms → Bacteria	27521	Open in IMG/M
3300022557\|Ga0212123_10016668	All Organisms → cellular organisms → Bacteria → Acidobacteria	8937	Open in IMG/M
3300022557\|Ga0212123_10206803	All Organisms → cellular organisms → Bacteria	1449	Open in IMG/M
3300022724\|Ga0242665_10181961	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	682	Open in IMG/M
3300025527\|Ga0208714_1081345	All Organisms → cellular organisms → Bacteria → Acidobacteria	658	Open in IMG/M
3300025922\|Ga0207646_10320597	Not Available	1400	Open in IMG/M
3300026271\|Ga0209880_1030588	Not Available	1256	Open in IMG/M
3300026291\|Ga0209890_10004637	All Organisms → cellular organisms → Bacteria → Acidobacteria	5870	Open in IMG/M
3300026294\|Ga0209839_10162194	All Organisms → cellular organisms → Bacteria → Acidobacteria	733	Open in IMG/M
3300026514\|Ga0257168_1013312	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_1_40CM_3_55_5	1609	Open in IMG/M
3300027565\|Ga0209219_1066383	Not Available	898	Open in IMG/M
3300027568\|Ga0208042_1000720	All Organisms → cellular organisms → Bacteria → Acidobacteria	11056	Open in IMG/M
3300027591\|Ga0209733_1002134	All Organisms → cellular organisms → Bacteria	4606	Open in IMG/M
3300027610\|Ga0209528_1011090	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1951	Open in IMG/M
3300027812\|Ga0209656_10324046	Not Available	707	Open in IMG/M
3300027846\|Ga0209180_10702007	Not Available	550	Open in IMG/M
3300027854\|Ga0209517_10091010	All Organisms → cellular organisms → Bacteria → Acidobacteria	2084	Open in IMG/M
3300027857\|Ga0209166_10141523	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1316	Open in IMG/M
3300027862\|Ga0209701_10310430	Not Available	903	Open in IMG/M
3300027875\|Ga0209283_10765350	Not Available	597	Open in IMG/M
3300027905\|Ga0209415_10036864	All Organisms → cellular organisms → Bacteria → Acidobacteria	6786	Open in IMG/M
3300027905\|Ga0209415_10098062	All Organisms → cellular organisms → Bacteria	3236	Open in IMG/M
3300027905\|Ga0209415_10235892	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	1668	Open in IMG/M
3300027911\|Ga0209698_10018658	All Organisms → cellular organisms → Bacteria	6647	Open in IMG/M
3300027911\|Ga0209698_10023108	All Organisms → cellular organisms → Bacteria	5838	Open in IMG/M
3300027911\|Ga0209698_10027372	All Organisms → cellular organisms → Bacteria	5280	Open in IMG/M
3300027911\|Ga0209698_11134218	Not Available	578	Open in IMG/M
3300028047\|Ga0209526_10288539	All Organisms → cellular organisms → Bacteria → Acidobacteria	1113	Open in IMG/M
3300028047\|Ga0209526_10294570	Not Available	1099	Open in IMG/M
3300029987\|Ga0311334_11741002	Not Available	531	Open in IMG/M
3300030000\|Ga0311337_10369179	All Organisms → cellular organisms → Bacteria	1210	Open in IMG/M
3300030114\|Ga0311333_11131636	All Organisms → cellular organisms → Bacteria	667	Open in IMG/M
3300031715\|Ga0307476_10586035	Not Available	827	Open in IMG/M
3300031718\|Ga0307474_11227033	All Organisms → cellular organisms → Bacteria	593	Open in IMG/M
3300031754\|Ga0307475_10274327	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_1_40CM_3_55_5	1352	Open in IMG/M
3300031754\|Ga0307475_10396617	Not Available	1109	Open in IMG/M
3300031938\|Ga0308175_100115207	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2509	Open in IMG/M
3300031938\|Ga0308175_103022340	Not Available	523	Open in IMG/M
3300032074\|Ga0308173_11305780	All Organisms → cellular organisms → Bacteria → Acidobacteria	680	Open in IMG/M
3300032160\|Ga0311301_10085825	All Organisms → cellular organisms → Bacteria → Acidobacteria	6376	Open in IMG/M
3300032160\|Ga0311301_12071576	Not Available	660	Open in IMG/M
3300033402\|Ga0326728_10036448	All Organisms → cellular organisms → Bacteria → Acidobacteria	7934	Open in IMG/M
3300033433\|Ga0326726_10115775	All Organisms → cellular organisms → Bacteria	2415	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.30%
Host-Associated	Host-Associated	0.70%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	69.23%
Aquatic	Environmental → Aquatic	30.07%
Plants	Host-Associated → Plants	0.70%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	65.73%
Freshwater	Environmental → Aquatic → Freshwater	18.18%
Sediment	Environmental → Aquatic → Sediment	8.39%
Thermal Springs	Environmental → Aquatic → Thermal Springs	3.50%
Peat	Environmental → Terrestrial → Peat	3.50%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.70%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	45.45%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	18.18%
Loam	Environmental → Terrestrial → Soil → Loam	11.89%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	8.39%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	8.39%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	3.50%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	3.50%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.70%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	30.07%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	10.49%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	9.09%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	8.39%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	6.29%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.99%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	4.90%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	4.90%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	3.50%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.50%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	3.50%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.10%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	2.10%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	1.40%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	1.40%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.70%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.70%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	15.38%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	8.39%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	6.29%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	6.29%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	6.99%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	5.59%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	3.50%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	3.50%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	3.50%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	3.50%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	3.50%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.50%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.80%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	2.80%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.10%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	2.10%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	2.10%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	2.10%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.40%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	1.40%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.40%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	1.40%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	1.40%
Prmafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil	1.40%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.40%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.40%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	1.40%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.70%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.70%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.70%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	0.70%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.70%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002914	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005994	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-049	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006055	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-1 deep-072012	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006102	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2013	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300009029	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 1 DNA2013-189	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009524	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_c_BC metaG	Environmental	Open in IMG/M
3300009632	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_4_40	Environmental	Open in IMG/M
3300009639	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_40	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300009839	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG	Environmental	Open in IMG/M
3300010339	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM3	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300014162	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_30_metaG	Environmental	Open in IMG/M
3300014164	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_30_metaG	Environmental	Open in IMG/M
3300014165	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaG	Environmental	Open in IMG/M
3300014167	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_10_metaG	Environmental	Open in IMG/M
3300014502	Permafrost microbial communities from Stordalen Mire, Sweden - 612E3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300015193	Arctic soil microbial communities from a glacier forefield, Rabots glacier, Tarfala, Sweden (Sample Rb6, proglacial stream)	Environmental	Open in IMG/M
3300017821	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_2	Environmental	Open in IMG/M
3300017823	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_3	Environmental	Open in IMG/M
3300017925	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_40	Environmental	Open in IMG/M
3300017931	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_100	Environmental	Open in IMG/M
3300017933	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_1	Environmental	Open in IMG/M
3300017942	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_3	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017988	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_30_metaG	Environmental	Open in IMG/M
3300017996	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_21_40	Environmental	Open in IMG/M
3300018005	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_150	Environmental	Open in IMG/M
3300018006	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_4	Environmental	Open in IMG/M
3300018012	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_5	Environmental	Open in IMG/M
3300018020	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_100	Environmental	Open in IMG/M
3300018025	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_100	Environmental	Open in IMG/M
3300018037	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_10	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300019242	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_10_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019888	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1c2	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300022724	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-17-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025527	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-1 shallow-072012 (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026271	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 2 DNA2013-191 (SPAdes)	Environmental	Open in IMG/M
3300026291	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-049 (SPAdes)	Environmental	Open in IMG/M
3300026294	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-050 (SPAdes)	Environmental	Open in IMG/M
3300026514	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-13-B	Environmental	Open in IMG/M
3300027565	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M1 (SPAdes)	Environmental	Open in IMG/M
3300027568	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_7_NC metaG (SPAdes)	Environmental	Open in IMG/M
3300027591	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M1 (SPAdes)	Environmental	Open in IMG/M
3300027610	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027812	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027854	Peat soil microbial communities from Weissenstadt, Germany - SII-2010 (SPAdes)	Environmental	Open in IMG/M
3300027857	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027862	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027905	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes)	Environmental	Open in IMG/M
3300027911	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300029987	I_Fen_E3 coassembly	Environmental	Open in IMG/M
3300030000	I_Fen_N3 coassembly	Environmental	Open in IMG/M
3300030114	I_Fen_E2 coassembly	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300032074	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R1	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300033402	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB31MN	Environmental	Open in IMG/M
3300033433	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MN	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI25617J43924_101383792	3300002914	Grasslands Soil	MPNVAPAARVSCVVEAISGLQRLQREMARLSQGDENYEGKKRALQTAIQELRKMISAKA*
Ga0062386_1017441531	3300004152	Bog Forest Soil	MPSVAPAARGAFLAEAVSGLQRLQRFQREMARVSRQDENYARKNVALQATIEELRKTISDNLQRVRNQPLE*
Ga0062595_1000896803	3300004479	Soil	MPRVAPASRIRLVEALSGLQRLRREMARLSQGDKAYDSKKRALQTAIQELQKRLSAHAS*
Ga0066388_1000751667	3300005332	Tropical Forest Soil	MPSVAPAARLNFVVEALAQLVRLQRELTRLAPRDEHYESNRRALQAAIRELRQMISRNVQ
Ga0066388_1009445395	3300005332	Tropical Forest Soil	PAARMNFVVEALAQLVRLQREMTRLAPRDEHYESNRRALQVAIRELRQMIARNVS*
Ga0070682_1020516261	3300005337	Corn Rhizosphere	MPRFAPASRIRLVEALSGLQRLRREMARLSQGDKAYNSKKRALQTAIQELQKRLSADAS*
Ga0070709_105229752	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MPRVAPATRIRLVEALSGLQQLRREMARLSQGDKTYESKKRALQAVIQELKEWLSTDTS*
Ga0070714_1003018942	3300005435	Agricultural Soil	MPRVAPATRIGLIEALSGLQRLQREMVRLSQRDKRYKNKKRALQAAIQELEKWLSADAS*
Ga0070714_1008949191	3300005435	Agricultural Soil	MPRVTPATRIRLVEALSGLQQLRREMARLSQGDKTYESKKRALQAVIQELKEWLSTDTS*
Ga0070714_1017491481	3300005435	Agricultural Soil	MPRVAPATRIDLVEALSGLQRLQREMVRSPQRDEFYKSEKRALQAAIHDLKKWLSADASYPRGH*
Ga0070710_112061611	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MPRVAPASRIRLVEALSGLQRLRREMARLSQGDKAYNSKKRALQTAIQELQKWLSADAP*
Ga0070708_1000479633	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MPSVAPAARVAFAVEAMSRLQRLQREMARLSQRDKNYKSNQRALQAAIRELRKMISANGQ
Ga0070681_105856491	3300005458	Corn Rhizosphere	MPRVAPASRIRLVEALSGLQRLRREMARLSQGDKAYNSKKRALQTAIQELQKWLSADAS*
Ga0066789_100249492	3300005994	Soil	MPSVAPAARVAIVVEAISGLQRLQREMARVSQGDENYESKKRALQTAIQELRKMISANVH
Ga0075029_10000229911	3300006052	Watersheds	MPSVAPAARVAFVREAMSGLQRLQREMARVSQRDENYESKRRALQATIRELRRMISVPKCSEHRKSARVA*
Ga0075029_1000074836	3300006052	Watersheds	MPSVAPAARVAFVVAAISGLQRLQREMARLSSSDEDYRSKKRALQATIQDLRNTIPKNKR
Ga0075029_1000634791	3300006052	Watersheds	MPSVAPVARVAFVVESISGLQRLQREMARVSQRDENYESKKRALRATIQELRKMISANVHGARGRDCTCDRL*
Ga0075029_1004172251	3300006052	Watersheds	MPSVAPAARVALVVEAISGLQRLKHEMAREWRRDGTYESKTRALQIAIKELRKMISADVQ
Ga0075029_1005090841	3300006052	Watersheds	PMPSVAPAARVSFVVESISALQRLQREMARSTQRDENYESKKRALQATIEELRKSISANVQ*
Ga0075029_1011820591	3300006052	Watersheds	MSVRHPKSSPPAARVAFVVEAISGLQRLQREMARVSQRDADYESKKRALQAAIQELRKMISAKAR*
Ga0097691_10267063	3300006055	Arctic Peat Soil	MPSVAPAARVAIVVEAISGLQRLQREMARVSQGDENYESKKRALQTAIQELRKMISANAP
Ga0075017_1009583882	3300006059	Watersheds	IIEQVKRLKADQFHSMSVRHLMPSVAPAARVALVVEAISGLQRLKHEMAREWRRDGTYESKTRALQIAIKELRKMISADVQ*
Ga0075015_1007285741	3300006102	Watersheds	LMPSVAPAARVALVVEAISGLQRLKHEMAREWRRDGTYESKTRALQIAIKELRKMISADVQ*
Ga0070712_1000671343	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MPRVTLATRIGLIEALSGLQRLQREMVRLSQRDKRYKNKKRALQAAIQELEKWLSADAS*
Ga0073928_100176004	3300006893	Iron-Sulfur Acid Spring	MPNAAPGARVSCVVEAISGLQRLQREMARLSQGDENYESKKRALQTAIQELRKMISAKA*
Ga0073928_100452466	3300006893	Iron-Sulfur Acid Spring	MPSSAPAANVAFVVEAISGLQRLQREMARLSQGDENYESKKRALRTAIQELRKMISAEP*
Ga0099794_107344821	3300007265	Vadose Zone Soil	PYSMLVTHLMPSSAPAANVPFIVEAISGLQRLQREMARLSHGDENYESKKRALQTAIQELRKIIPAKA*
Ga0066793_103631171	3300009029	Prmafrost Soil	PIPYSMSVRHPMPSVAPTARVAFVVEAISGLQRLQREMARVSQRDENYESKKRALQAAIQELRKMISVNVQ*
Ga0066793_104177272	3300009029	Prmafrost Soil	MPSVAPAARVAFVVEAISGLQRLQREMARLSQRDKDYESKKRALQATIQELRKMISANAP
Ga0099829_113940182	3300009038	Vadose Zone Soil	MPNVAPAARVAFVVEAISGLQRLQREMARLSQGDENYESKKRALQTAIQELRKMISAKA*
Ga0099830_112077501	3300009088	Vadose Zone Soil	MASVAPAARVAFVVEVISGLQRLQREMARLSQGDENYESKKRALQTAIQELRKMISAKA*
Ga0099828_104388032	3300009089	Vadose Zone Soil	MPSVAPAARVAFVVEAMPGLQRLQREMARSSQRDENYESKKRALQAAIQELRKMISANAQ
Ga0099827_101814741	3300009090	Vadose Zone Soil	MPNVAPAARVSCVVEAISGLQRLQREMARLSQGDENYESKKRALQTAIQELRKMIS
Ga0116225_14460021	3300009524	Peatlands Soil	NCGPYSMSVKHVMPSVAPAARVAFLVEAISGLPRLQREMTRDENYESKKRALQAAIQELRKKISANAQ*
Ga0116102_10299984	3300009632	Peatland	MSVKHVMPSVAPAARVAFLVEAISGLQRLQREMTRDENYESKKRALQAAIQELRKKISANAQ*
Ga0116122_10857702	3300009639	Peatland	MPSVAPAARVAFLVEAISGLQRLQREMTRDENYESKKRALQAAIQELRKKISANAQ*
Ga0126374_108554081	3300009792	Tropical Forest Soil	MATVAPAARITFVVEALAQLERLQREMTRLAPRDENYESNRRALQAAIRELRSMIARNVD
Ga0116223_103693951	3300009839	Peatlands Soil	MPRVAPAARVAFVVEAISGLQRLQHEMTRVSQRDENYESKKRALQAAIQEL
Ga0074046_1000077526	3300010339	Bog Forest Soil	MPSVAPAARVAFVVEAISGLQRLQREMARVSQRDENYESKKRALQVAIQELRKMISAKAQ
Ga0074046_1000122226	3300010339	Bog Forest Soil	MPRVAPAARVAFVVEAISGLQRLQREMSRVSQRDENYESKKRALQAAIQELRKMISANVQ
Ga0074046_100063178	3300010339	Bog Forest Soil	MPSVAPAARVAFVVEALSGLQRLQREMARLSQRDESYESKKRALQAAIQELRKMISANAQ
Ga0074044_100006977	3300010343	Bog Forest Soil	MPSVAPAARVAFVVEAISGLQRLQREMTRMSQRDENYENKKRALQAAIQELRMMIPANVQRAGRSLRRVALPSA*
Ga0074044_101175982	3300010343	Bog Forest Soil	MPSVAPAARAVEAIAGLQRLQREMARASQRDEDYESKKRALQAAIQELRKKISANAH*
Ga0126378_133288611	3300010361	Tropical Forest Soil	MAFVVEALAQLERLQREMTRLAPRDENYESNRRALQDAIRELRSMIVRNVQ*
Ga0126379_101879772	3300010366	Tropical Forest Soil	MRATPVGAVAPVVQAIFTLRKLQREMARLSPRDEDYESNRRALESAIRELRKIIAANVH*
Ga0126379_104106422	3300010366	Tropical Forest Soil	MRVAPATSVAPIVQAIFTLQRLQREMARLSPRDEDYESNRRALESAIRELRKIISCSVQ*
Ga0126379_109215681	3300010366	Tropical Forest Soil	MAFIVEALAQLERLQREMTRFAPRDENYESNRRALQSAIRELRSMVARNVD*
Ga0136449_1006584783	3300010379	Peatlands Soil	MPRVAPAARVAFVVEAISGLQRLQREMGRLSQRDEDYESKKRALQAAIQELRKMISANAQ
Ga0134126_120568941	3300010396	Terrestrial Soil	MPRVAPASRIRLVEALSGLQRLRREMARLSQGDNAYNSKKRALQTAIQELQKWLSADAS*
Ga0137392_105041001	3300011269	Vadose Zone Soil	MPSVAPAARVAFVVEAISGLQRLQREMARLSQGDENYESKKRALQTAIQELRKMISAKA*
Ga0137393_115316571	3300011271	Vadose Zone Soil	MPSVAPAARVAFVVEAIPGLQRLQREMARSSQRDENYESKKRALHAAIQELRKMISANAQ
Ga0137389_104628013	3300012096	Vadose Zone Soil	MPSVAPAARVAFVVEAIPGLQRLQREMARSSQRDENYESKKRALQAAIQELRKMISANA
Ga0137389_106908491	3300012096	Vadose Zone Soil	PERQFPYSMLVRFLMPNVAPAARVSCVVEAISGLQRLQREMARLSQGDENYESKKRALQTAIRELRKMISAKA*
Ga0137388_102167922	3300012189	Vadose Zone Soil	MPSVAPAARVACVVEAIPGLQRLQREMARSSQRDENYESKKRALQAAIQELRKMISANAQ
Ga0137388_106474581	3300012189	Vadose Zone Soil	RVAPAARVAFVVEAISGLQRLQREMVRLPHLDENYESKKRALQATIQRLRKMISADAR*
Ga0137388_108751181	3300012189	Vadose Zone Soil	MPSAAPAARVAFVVEAIPALQRLQREMARSSQRDENYESKKRALQAAIQELRKMISANAQ
Ga0137382_111750601	3300012200	Vadose Zone Soil	YSMLVRHLMPSVAPVARVAFVVEAISGLQRLQREMARLSQGDENYESKKRALQTAIQELRKMISAEA*
Ga0137399_110695001	3300012203	Vadose Zone Soil	MLVRHLMPSSAPAANVTFIVEAISGLQRLQREMARLSHGDENYESKKRALQTGIQELRKMISAKA*
Ga0150985_1197380232	3300012212	Avena Fatua Rhizosphere	MPRLAPATRIRLVEAISGLQRLRREMARSSEGDENYERKKRALQAVIQQLQKSLSADDS*
Ga0137395_100354572	3300012917	Vadose Zone Soil	MPSVAPAARVAFVVEAISGLQRLQREMARLSQRDENYESKKRALQTAIQELRKMISAKA*
Ga0137395_100984994	3300012917	Vadose Zone Soil	MLVRHLMPSSAPAANVTFIVEAISGLQRLQREMARLSHGDENYKSKKRALQTAIQELRKINPAKA*
Ga0137395_101697361	3300012917	Vadose Zone Soil	MPSVAPAARVAFVVEAIPGLQRLQREMARSSQRDENYESKKRALQAAIQELRKMISANAQ
Ga0137359_102141253	3300012923	Vadose Zone Soil	MPSSAPAANVTFIVEAISGLQRLQREMARLSQGDENYESKKRALQTAIQELRKMISAKA*
Ga0137359_107582261	3300012923	Vadose Zone Soil	NVTFIVEAISGLQRLQREMSRLSQGDENSDSKKRALQTAIQELRKIIPAKA*
Ga0164303_110623291	3300012957	Soil	MPRVAPASRIRLVEALSGLQRLRREMARLSQGDKAYNSKKRALQTAIQELQNWLWTHAS*
Ga0181538_100864861	3300014162	Bog	MPSVAPAPRRVAFVVESLSGLQRLQREMARVSQRGEDYESKKRALRATIQELRKMISAKAN*
Ga0181532_105346552	3300014164	Bog	AFMGEAISRLQRLQREMARVSQQDENYENKRRALQAAIQELRKMTSAKVH*
Ga0181523_101980832	3300014165	Bog	MPSVAPAPRRVAFVVESLSGLQRLQREMARVSQRDEDYESKKRALRATIQELRKMISAKAN*
Ga0181528_106214902	3300014167	Bog	MPIVAPTGRVADVVEAISGLQRLQREMARVSQRDDNYEGKKRALQTTIRELRKMISAKVH
Ga0182021_127008982	3300014502	Fen	MSSVAPAARVAFVVEAVAQLQRLQHEMTRMAPRDRNYESNRRALQDAIQELQKMISKNTQ
Ga0167668_10169003	3300015193	Glacier Forefield Soil	MPSVAPAPRVAFVVEAISGLQRLQREMARLSQGDENYESKKRALQTAIQELRKMISAKA*
Ga0167668_10212991	3300015193	Glacier Forefield Soil	PSSAPAANVAFVVEVISGLQRLQREMARLSQGDENYESKKRALQTAIQELRKMISAKA*
Ga0187812_12265231	3300017821	Freshwater Sediment	PRGHFPHSMSVRHPMPSVAPAARVAFVVEAISGLQRLQREMTRVSQRDENYECKKRALQAAIQELRKMISANVQ
Ga0187818_101225682	3300017823	Freshwater Sediment	MASVAPAARVAFVVEAISGLQRLQREMARVSQPDENYESKKRALQAAIQELRKMISANVQ
Ga0187856_100300316	3300017925	Peatland	MPSVALAARVAFVLESVSGLQRLQREMARLSQRDEDYESKKHALQAAIQELRKMISVNAQ
Ga0187877_10789612	3300017931	Peatland	MSVKHVMPSVAPAARVAFLVEAISGLQRLQREMTRDENYESKKRALQAAIQELRKKISANAQ
Ga0187801_103598801	3300017933	Freshwater Sediment	MASVAPAARVAFVVEAISGLQLLQRKMNRVSQRDENYESKKRALQAAIQELRKMISANVQ
Ga0187808_105165282	3300017942	Freshwater Sediment	MPSVAPAARVAFVVEAISGLQRLQREMSRVSQRDENYESKKRALQAAIQELRKMISANVQ
Ga0187819_101254602	3300017943	Freshwater Sediment	MPRVAPAARVAFVVEAISGLQRLQREMSRVSEQDENYESKKRALQAAIQELRKMISANVQ
Ga0187819_104994081	3300017943	Freshwater Sediment	PAARVAFVVEAMSGLQRLQREMTRVSQRDEDYESKKSALQAAIEELRKMISANVQ
Ga0187817_104187161	3300017955	Freshwater Sediment	MPSVAPAARVAFVVEAISGLQRLQREMTRVSQRDENYESYKRALQAVIQELWKMISANVQ
Ga0181520_110243501	3300017988	Bog	MPNVGPAGRVADVVEAISGLRRLQREMARVSQRDENYEGKRRALQTTIRELRKMISAKVH
Ga0187891_11257592	3300017996	Peatland	MPSVAPAARVAFVLEAVSGLQRLQHEMARLSQRDEDYESKKRALQAAIQELRKMISANVQ
Ga0187878_11741721	3300018005	Peatland	MPSVAPAARVAFVLEAVSGLQRLQHEMARLSQRDEDYESKKHALQAAIQELRKMISVNAQ
Ga0187804_101091652	3300018006	Freshwater Sediment	MASVAPAARVAFVLEAVSGLQRLQHEMARLSQRDEDYESKRRALQAAIQELRKMISANVQ
Ga0187810_104874132	3300018012	Freshwater Sediment	MPSVAPAARVAFVVEAMSGLQRLQREMTRVSQRDENYESKKRALQAAIQELWKMISANVQ
Ga0187861_104142021	3300018020	Peatland	MPSVAPAARVACVVEAISGLQRLQREMARVSQRDENYESEKRALQATIQKLREMISVNVQ
Ga0187885_102494322	3300018025	Peatland	MPSVALAARVAFVLESVSGLQRLQREMARLSQRDEDYESKKRALQVAIQELRKMISANAQ
Ga0187883_100112121	3300018037	Peatland	MPSVAPAPRRVAFVVESLSGLQRLQREMARVSQRGEDYESKKRALRATIQELRKMISAKA
Ga0066655_105022271	3300018431	Grasslands Soil	RVAPATRIRLVEALSGLQRLRREMARLSQGDNAYNSKKRALQTAIQALQKWLSEDAS
Ga0066662_111606732	3300018468	Grasslands Soil	MPRIAPASRIRLVEALSGLQRLRREMARLSQGDKAYNSKKRALQTAIQELQKWLSEDASSLGK
Ga0181502_11938171	3300019242	Peatland	HLMPNVGPAGRVADVVEAISGLRRLQREMARVSQRDENYEGKRRALQTTIRELRKMISAKVH
Ga0193751_10137404	3300019888	Soil	MPNVAPAARVSCVVEAISGLQRLQREMARLSQGDQNYERKKRALQTAIQELRKMISAKA
Ga0210407_100715243	3300020579	Soil	MPNVAPAARVSCVVEAISGLQRLQREMARLSQGDENYESKKRALQTAIQELRKMISARA
Ga0210407_107976962	3300020579	Soil	APPAARVSCVVEAISGLQRLQREMARLSQGDENYESKKRALQTAIQELRKMISAKA
Ga0210407_114610461	3300020579	Soil	MPNAPPAAPVSCVVEAISGLQRLQREMARLSQGDENYESKKRALQTAI
Ga0210399_100735285	3300020581	Soil	MPNAAPAAHVSCVVEAISGLQRLQREMARLSQGDENYESKKRALQTAIQELRKMISAKA
Ga0210406_100157426	3300021168	Soil	MPNAAPAARVSCVVEAISGLQRLQREMARLSQGDENYERKKCALQTAIQELRKMISAKA
Ga0210406_100239034	3300021168	Soil	MPNVAPAARVSCVVEAISGLQRLQREMARLSQGDENYESKKRALQTAIQELRKMISAKAY
Ga0210405_102395521	3300021171	Soil	MLVRHLTPSSAPAAKVAFVVEAISGLQRLQREMARLPQENENYESKKRALQTAIQELRKMISAQA
Ga0212123_1000430831	3300022557	Iron-Sulfur Acid Spring	MPSSAPAANVAFVVEAISGLQRLQREMARLSQGDENYESKKRALRTAIQELRKMISAEP
Ga0212123_100166684	3300022557	Iron-Sulfur Acid Spring	MPNAAPGARVSCVVEAISGLQRLQREMARLSQGDENYESKKRALQTAIQELRKMISAKA
Ga0212123_102068032	3300022557	Iron-Sulfur Acid Spring	MSSAAPAARVSFVVESISGLQRLQREMARVSQRDENYESKKRALQAAIQELRKMISANAE
Ga0242665_101819611	3300022724	Soil	MLVRHLTPSSAPAAKVAFVVEAISGLQRLQREMTRLPQENENYESKKRALQTAIQELRKMISAKA
Ga0208714_10813451	3300025527	Arctic Peat Soil	PIPYSMSVRHPMPSVAPAARVAIVVEAISGLQRLQREMARVSQGDENYESKKRALQTAIQELRKMISANVH
Ga0207646_103205972	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MPSVAPAARVAFIVEAMSRLRRLQREMARLSMRDKNYESNQRALQAAIQELRKMISANTQ
Ga0209880_10305881	3300026271	Soil	MPGVAPVARVAFVVEAISGLQRLQGEMARLSQRDEDYESKKRALQATIQELRKMISANAP
Ga0209890_100046377	3300026291	Soil	AARVAIVVEAISGLQRLQREMARVSQGDENYESKKRALQTAIQELRKMISANVH
Ga0209839_101621941	3300026294	Soil	YSMSVRHPMPSVAPAARVAIVVEAISGLQRLQREMARVSQGDENYESKKRALQTAIQELRKMISANVH
Ga0257168_10133122	3300026514	Soil	MLVKHLMPSVAPAARVAFVVEAISGLQRLQREMARLSQGDENYESKKRALQTAIQELRKMISAKA
Ga0209219_10663831	3300027565	Forest Soil	PNVAPAARVSCVVEAISGLQRLQREMARLSQGDENYESKKRALQTAIQELRKMISAKA
Ga0208042_10007208	3300027568	Peatlands Soil	MPSVAPAARVAFVVESISGLQRLQREMARVWQRDENDESKKRALQAAIQELRKMISANAQ
Ga0209733_10021345	3300027591	Forest Soil	MPNVAPAARVSCVVEAISGLQRLQREMARLSQGDENYESKKHALQTAIQELRKMISAKA
Ga0209528_10110903	3300027610	Forest Soil	MLVRHLTPSSAPAAKVAFVVEAISGLQRLQREMARLPQENENYESKKRALQTAIQELRKMISAKA
Ga0209656_103240461	3300027812	Bog Forest Soil	MPSVAPAARVAFMVQAISGLQMLQREMARVSQRDENYESQERALQAAIQELRKMISANTRERGTVCSARRSRV
Ga0209180_107020071	3300027846	Vadose Zone Soil	MPSVAPAARVAFVVEAISGLQRLQREMARLSQQDKNHESKNRALQAAIQELRMMISANAQ
Ga0209517_100910103	3300027854	Peatlands Soil	MPRVAPAARVAFVVEAISGLQRLQHEMTRVSQRDENYESKKRALQAAIQELQKMISANVQ
Ga0209166_101415231	3300027857	Surface Soil	MASAAPAARVAFAYEALSGLLRLQREMARLSQQDENYADKKRALQVAIQELRKRLSADEQ
Ga0209701_103104302	3300027862	Vadose Zone Soil	LPSIAPAARVDFVAEAISGLQRLQREMARVPQRDENYEDKKRALQATIQELRKMIPANVN
Ga0209283_107653502	3300027875	Vadose Zone Soil	MPRVAPAARVAFVVEAISGLQRLQREMVRLPHLDENYESKKRALQATIQRLRKMISADAR
Ga0209415_100368648	3300027905	Peatlands Soil	MPSVAPAARAALVAESIAGLQRLQREMARVSQRDEDYESKKQALQATIQELRKTISASGD
Ga0209415_100980621	3300027905	Peatlands Soil	MPSVAPAARAAVVVEAISGLQRLQRQMARMSQRDKTYRSKKRALRATIRELRKMISAKAN
Ga0209415_102358922	3300027905	Peatlands Soil	MPRVAPAARVAFVVDAISGLQRLQRGMTRFSRRDKSYESKKRALQAAIQELRKMISANAR
Ga0209698_100186585	3300027911	Watersheds	MPSVAPVARVAFVVESISGLQRLQREMARVSQRDENYESKKRALRATIQELRKMISANVHGARGRDCTCDRL
Ga0209698_100231084	3300027911	Watersheds	MPSVAPAARVAFVREAMSGLQRLQREMARVSQRDENYESKRRALQATIRELRRMISVPKCSEHRKSARVA
Ga0209698_100273729	3300027911	Watersheds	MPSVAPAARAAFVVESISGLQRLQREMARVSRRDKTYESKKRALRATIQELRKTISANVN
Ga0209698_111342181	3300027911	Watersheds	MPSVAPAARVSFVVESISALQRLQREMARSTQRDENYESKKRALQATIEELRKSISANVQ
Ga0209526_102885391	3300028047	Forest Soil	MPNAAPAARVSCVVEAISGLQRLQREMARLSQGDENYESKKRALQTAIQELRKMISAKA
Ga0209526_102945701	3300028047	Forest Soil	MPSSASAANVAFVVEAISGLQRLQREMARLSQGDENYESKERALQTAIQELRKMISAKA
Ga0311334_117410021	3300029987	Fen	MSSVAPAVRVAFVVEAVAQLQRLQHDMTRMAPRDRNYESNRRALQDAIQE
Ga0311337_103691792	3300030000	Fen	MSSVAPAVRVAFVVEAVAQLQRLQHEMTRMAPRDRNYESNRRALQDAIQELQKMISKNTQ
Ga0311333_111316362	3300030114	Fen	PSPETSAHPDVGWCVMSSVAPAVRVAFVVEAVAQLQRLQHEMTRMAPRDRNYESNRRALQDAIQELQKMISKNTQ
Ga0307476_105860352	3300031715	Hardwood Forest Soil	MPSVAPAARVAFVVEAISGLQRLQREMARLSQRDENYESKKRALQTAIQELRKMISAKA
Ga0307474_112270331	3300031718	Hardwood Forest Soil	AARVSCVVEAISGLQRLQREMARLSQGDENYESKKRALQTAIQELRKMISAKA
Ga0307475_102743272	3300031754	Hardwood Forest Soil	MPSVAPAARVAFVVEAISGLQRLQREMARLSQRDENYESKKRALQTAI
Ga0307475_103966171	3300031754	Hardwood Forest Soil	VSFVVESMSGLRRLQREMARASQRDENYESKKRALQAAIQELRKMMSANAE
Ga0308175_1001152071	3300031938	Soil	MPRIAPASRIRLIEALSGLQRLRREMARLSQGDKAYNSKKRALETAIQELQQWLSADAS
Ga0308175_1030223401	3300031938	Soil	MPRLAPPSRIRLVEALSGLQRLRREMAAYNNKKRALQTAIQELQKWLSADV
Ga0308173_113057801	3300032074	Soil	MPRLAPASRIRLAAALSGLQRLRREMARMSQGDKAYNRKKRALRNAIQELQKWLSADAP
Ga0311301_100858257	3300032160	Peatlands Soil	MPSVAPAARVAFVLEAISGLQRLQREIARLSQRDEDYESKKRALQAAIQELRKMISANAQ
Ga0311301_120715762	3300032160	Peatlands Soil	MPRVAPAARVAFVVEAISGLQRLQHEMTRVSQRDENYESKKRALQAAIQELQK
Ga0326728_100364486	3300033402	Peat Soil	MPSVAPAARVAFVLEAISGLQKLQREMARLPQQDEDYESKKRALQAAIQELRKMISANAQ
Ga0326726_101157751	3300033433	Peat Soil	MPSVAPGARVAFVVEAISGLQRLQREMARLSQRDESYESKKRALQAAIRELRKMISANAQ

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F052099

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences