Metagenome Family F052100

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F052100
Family Type	Metagenome
Number of Sequences	143
Average Sequence Length	60 residues
Representative Sequence	MKDLGNTIYSFGCVVAATVLGIGVADYWFGHHQLTAFLSWAVLAAIPWLVGRASLYVLAR
Number of Associated Samples	93
Number of Associated Scaffolds	143

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	81.12 %
% of genes near scaffold ends (potentially truncated)	45.45 %
% of genes from short scaffolds (< 2000 bps)	86.01 %
Associated GOLD sequencing projects	87
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.48

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (78.322 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (24.476 % of family members)
Environment Ontology (ENVO)	Unclassified (51.748 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (72.028 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 62.50% β-sheet: 0.00% Coil/Unstructured: 37.50%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.48
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.48
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 143 Family Scaffolds
PF04519	Bactofilin	2.80
PF06904	Extensin-like_C	2.10
PF04226	Transgly_assoc	2.10
PF08734	GYD	1.40
PF13356	Arm-DNA-bind_3	0.70
PF01925	TauE	0.70
PF03401	TctC	0.70
PF00550	PP-binding	0.70
PF06411	HdeA	0.70
PF05610	DUF779	0.70
PF07345	DUF1476	0.70
PF00156	Pribosyltran	0.70
PF13545	HTH_Crp_2	0.70
PF02371	Transposase_20	0.70
PF09361	Phasin_2	0.70
PF04140	ICMT	0.70
PF13414	TPR_11	0.70
PF06577	EipA	0.70
PF13533	Biotin_lipoyl_2	0.70
PF07883	Cupin_2	0.70
PF01977	UbiD	0.70
PF11185	DUF2971	0.70
PF00216	Bac_DNA_binding	0.70
PF01425	Amidase	0.70

COG ID	Name	Functional Category	% Frequency in 143 Family Scaffolds
COG1664	Cytoskeletal protein CcmA, bactofilin family	Cytoskeleton [Z]	2.80
COG2261	Uncharacterized membrane protein YeaQ/YmgE, transglycosylase-associated protein family	General function prediction only [R]	2.10
COG3921	Uncharacterized conserved protein, contains Extensin-like_C domain	Function unknown [S]	2.10
COG4274	Uncharacterized conserved protein, contains GYD domain	Function unknown [S]	1.40
COG0043	3-polyprenyl-4-hydroxybenzoate decarboxylase	Coenzyme transport and metabolism [H]	0.70
COG0154	Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit or related amidase	Translation, ribosomal structure and biogenesis [J]	0.70
COG0730	Sulfite exporter TauE/SafE/YfcA and related permeases, UPF0721 family	Inorganic ion transport and metabolism [P]	0.70
COG0776	Bacterial nucleoid DNA-binding protein IHF-alpha	Replication, recombination and repair [L]	0.70
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	0.70
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.70
COG3564	Uncharacterized conserved protein, DUF779 family	Function unknown [S]	0.70

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	78.32 %
All Organisms	root	All Organisms	21.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	78.32 %
cellular organisms	root	All Organisms → cellular organisms	21.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	78.32 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	21.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	78.32 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	16.08 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	78.32 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	11.19 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.70 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	78.32 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	6.99 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	0.70 %
Vibrionales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Vibrionales	0.70 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	78.32 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2.10 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.70 %
Gemmatales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales	0.70 %
Vibrionaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Vibrionales → Vibrionaceae	0.70 %
Kaistiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Kaistiaceae	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	78.32 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2.10 %
Gemmataceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae	0.70 %
Bauldia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Kaistiaceae → Bauldia	0.70 %
Vibrio	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Vibrionales → Vibrionaceae → Vibrio	0.70 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	78.32 %
Gemmata	genus	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae → Gemmata	0.70 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	0.70 %
unclassified Bauldia	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Kaistiaceae → Bauldia → unclassified Bauldia	0.70 %
Vibrio anguillarum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Vibrionales → Vibrionaceae → Vibrio → Vibrio anguillarum	0.70 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	78.32 %
Gemmata massiliana	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae → Gemmata → Gemmata massiliana	0.70 %
Bauldia sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Kaistiaceae → Bauldia → unclassified Bauldia → Bauldia sp.	0.70 %
Bradyrhizobium sp. WSM3983	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. WSM3983	0.70 %
Vibrio anguillarum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Vibrionales → Vibrionaceae → Vibrio → Vibrio anguillarum	0.70 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.70 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000655\|AF_2010_repII_A100DRAFT_1009217	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1891	Open in IMG/M
3300001867\|JGI12627J18819_10292420	Not Available	656	Open in IMG/M
3300003505\|JGIcombinedJ51221_10041358	Not Available	1720	Open in IMG/M
3300004633\|Ga0066395_10173313	Not Available	1111	Open in IMG/M
3300004633\|Ga0066395_10444541	Not Available	738	Open in IMG/M
3300005187\|Ga0066675_10501530	Not Available	907	Open in IMG/M
3300005332\|Ga0066388_100292119	Not Available	2274	Open in IMG/M
3300005332\|Ga0066388_100785068	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. WSM3983	1547	Open in IMG/M
3300005332\|Ga0066388_101818817	Not Available	1084	Open in IMG/M
3300005332\|Ga0066388_104625316	Not Available	700	Open in IMG/M
3300005332\|Ga0066388_107842293	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Vibrionales → Vibrionaceae → Vibrio → Vibrio anguillarum	534	Open in IMG/M
3300005435\|Ga0070714_101386329	Not Available	686	Open in IMG/M
3300005436\|Ga0070713_100515365	Not Available	1130	Open in IMG/M
3300005560\|Ga0066670_11003334	Not Available	510	Open in IMG/M
3300005569\|Ga0066705_10327749	Not Available	968	Open in IMG/M
3300005764\|Ga0066903_100216523	All Organisms → cellular organisms → Bacteria	2895	Open in IMG/M
3300005764\|Ga0066903_101054255	Not Available	1493	Open in IMG/M
3300005764\|Ga0066903_101161405	Not Available	1430	Open in IMG/M
3300005764\|Ga0066903_101253333	Not Available	1381	Open in IMG/M
3300005764\|Ga0066903_101752992	Not Available	1184	Open in IMG/M
3300005764\|Ga0066903_101910196	All Organisms → cellular organisms → Bacteria	1137	Open in IMG/M
3300005764\|Ga0066903_102648754	Not Available	972	Open in IMG/M
3300005764\|Ga0066903_106484328	Not Available	610	Open in IMG/M
3300005764\|Ga0066903_106751583	Not Available	597	Open in IMG/M
3300006175\|Ga0070712_100042544	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3124	Open in IMG/M
3300006175\|Ga0070712_100060609	All Organisms → cellular organisms → Bacteria → Proteobacteria	2669	Open in IMG/M
3300009792\|Ga0126374_10809946	Not Available	717	Open in IMG/M
3300010046\|Ga0126384_11461318	Not Available	639	Open in IMG/M
3300010046\|Ga0126384_12435933	Not Available	507	Open in IMG/M
3300010048\|Ga0126373_10036594	All Organisms → cellular organisms → Bacteria → Proteobacteria	4284	Open in IMG/M
3300010048\|Ga0126373_10115815	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Kaistiaceae → Bauldia → unclassified Bauldia → Bauldia sp.	2500	Open in IMG/M
3300010048\|Ga0126373_10202392	Not Available	1925	Open in IMG/M
3300010048\|Ga0126373_12284091	Not Available	602	Open in IMG/M
3300010358\|Ga0126370_10028513	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3327	Open in IMG/M
3300010358\|Ga0126370_11964856	Not Available	571	Open in IMG/M
3300010358\|Ga0126370_12362933	Not Available	527	Open in IMG/M
3300010360\|Ga0126372_10860652	Not Available	905	Open in IMG/M
3300010361\|Ga0126378_10421858	Not Available	1447	Open in IMG/M
3300010366\|Ga0126379_11733299	Not Available	729	Open in IMG/M
3300010366\|Ga0126379_12590231	Not Available	605	Open in IMG/M
3300010366\|Ga0126379_13589911	Not Available	520	Open in IMG/M
3300010376\|Ga0126381_100040678	All Organisms → cellular organisms → Bacteria	5635	Open in IMG/M
3300010376\|Ga0126381_100076609	All Organisms → cellular organisms → Bacteria → Proteobacteria	4191	Open in IMG/M
3300010376\|Ga0126381_102565267	Not Available	730	Open in IMG/M
3300010376\|Ga0126381_103221747	Not Available	645	Open in IMG/M
3300010376\|Ga0126381_103233028	Not Available	644	Open in IMG/M
3300010863\|Ga0124850_1006820	All Organisms → cellular organisms → Bacteria	3602	Open in IMG/M
3300012677\|Ga0153928_1028427	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1203	Open in IMG/M
3300012948\|Ga0126375_11186081	Not Available	634	Open in IMG/M
3300012948\|Ga0126375_12039069	Not Available	508	Open in IMG/M
3300012971\|Ga0126369_10286043	Not Available	1642	Open in IMG/M
3300016270\|Ga0182036_11617379	Not Available	546	Open in IMG/M
3300016294\|Ga0182041_10274448	Not Available	1385	Open in IMG/M
3300016357\|Ga0182032_10008805	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae → Gemmata → Gemmata massiliana	5328	Open in IMG/M
3300016357\|Ga0182032_10481469	Not Available	1017	Open in IMG/M
3300016357\|Ga0182032_11301876	All Organisms → cellular organisms → Bacteria → Proteobacteria	627	Open in IMG/M
3300016371\|Ga0182034_10774721	Not Available	820	Open in IMG/M
3300016371\|Ga0182034_11971983	Not Available	516	Open in IMG/M
3300016422\|Ga0182039_11286091	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	662	Open in IMG/M
3300017924\|Ga0187820_1134032	Not Available	735	Open in IMG/M
3300017928\|Ga0187806_1173143	Not Available	722	Open in IMG/M
3300017959\|Ga0187779_10098469	Not Available	1760	Open in IMG/M
3300017973\|Ga0187780_10367049	Not Available	1018	Open in IMG/M
3300017974\|Ga0187777_10021610	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4092	Open in IMG/M
3300017974\|Ga0187777_10702308	Not Available	718	Open in IMG/M
3300017999\|Ga0187767_10187489	Not Available	645	Open in IMG/M
3300017999\|Ga0187767_10333712	Not Available	528	Open in IMG/M
3300018058\|Ga0187766_10096976	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1783	Open in IMG/M
3300018058\|Ga0187766_10134689	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1523	Open in IMG/M
3300018060\|Ga0187765_10005342	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	5453	Open in IMG/M
3300018431\|Ga0066655_10408838	Not Available	895	Open in IMG/M
3300020150\|Ga0187768_1069305	Not Available	792	Open in IMG/M
3300020150\|Ga0187768_1150727	Not Available	536	Open in IMG/M
3300020579\|Ga0210407_10985494	Not Available	643	Open in IMG/M
3300020580\|Ga0210403_10142326	Not Available	1959	Open in IMG/M
3300020580\|Ga0210403_10147595	All Organisms → cellular organisms → Bacteria	1922	Open in IMG/M
3300020580\|Ga0210403_10280074	Not Available	1367	Open in IMG/M
3300020580\|Ga0210403_11153457	Not Available	599	Open in IMG/M
3300020581\|Ga0210399_10505673	Not Available	1004	Open in IMG/M
3300021168\|Ga0210406_11147305	Not Available	569	Open in IMG/M
3300021405\|Ga0210387_11711015	Not Available	532	Open in IMG/M
3300021420\|Ga0210394_10169155	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1902	Open in IMG/M
3300021420\|Ga0210394_10369105	All Organisms → cellular organisms → Bacteria → Proteobacteria	1262	Open in IMG/M
3300021560\|Ga0126371_10439916	Not Available	1449	Open in IMG/M
3300021560\|Ga0126371_10788364	Not Available	1097	Open in IMG/M
3300021560\|Ga0126371_11743489	Not Available	746	Open in IMG/M
3300021560\|Ga0126371_11823795	Not Available	729	Open in IMG/M
3300021560\|Ga0126371_12163643	Not Available	671	Open in IMG/M
3300025915\|Ga0207693_10187425	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1628	Open in IMG/M
3300025929\|Ga0207664_11737368	Not Available	546	Open in IMG/M
3300025939\|Ga0207665_10065721	All Organisms → cellular organisms → Bacteria	2467	Open in IMG/M
3300026723\|Ga0208342_101455	Not Available	684	Open in IMG/M
3300026896\|Ga0207730_1017892	Not Available	604	Open in IMG/M
3300026898\|Ga0207788_1027567	Not Available	501	Open in IMG/M
3300026959\|Ga0207852_1021137	Not Available	675	Open in IMG/M
3300026979\|Ga0207817_1006816	Not Available	1357	Open in IMG/M
3300026997\|Ga0207784_1006006	Not Available	1403	Open in IMG/M
3300027003\|Ga0207722_1016346	Not Available	832	Open in IMG/M
3300027090\|Ga0208604_1005309	Not Available	1212	Open in IMG/M
3300027313\|Ga0207780_1015203	Not Available	1516	Open in IMG/M
3300027680\|Ga0207826_1043548	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1246	Open in IMG/M
3300027703\|Ga0207862_1125235	Not Available	771	Open in IMG/M
3300027703\|Ga0207862_1153034	Not Available	689	Open in IMG/M
3300027874\|Ga0209465_10063928	Not Available	1775	Open in IMG/M
3300027874\|Ga0209465_10351773	Not Available	738	Open in IMG/M
3300031545\|Ga0318541_10000774	All Organisms → cellular organisms → Bacteria	11156	Open in IMG/M
3300031545\|Ga0318541_10035519	Not Available	2499	Open in IMG/M
3300031545\|Ga0318541_10517947	Not Available	667	Open in IMG/M
3300031546\|Ga0318538_10016593	Not Available	3199	Open in IMG/M
3300031546\|Ga0318538_10410372	Not Available	733	Open in IMG/M
3300031561\|Ga0318528_10616302	Not Available	582	Open in IMG/M
3300031573\|Ga0310915_10155723	Not Available	1582	Open in IMG/M
3300031573\|Ga0310915_10727243	Not Available	700	Open in IMG/M
3300031668\|Ga0318542_10332015	Not Available	781	Open in IMG/M
3300031679\|Ga0318561_10744416	Not Available	539	Open in IMG/M
3300031681\|Ga0318572_10167130	Not Available	1276	Open in IMG/M
3300031708\|Ga0310686_101996957	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2454	Open in IMG/M
3300031719\|Ga0306917_10604868	Not Available	862	Open in IMG/M
3300031723\|Ga0318493_10757735	Not Available	546	Open in IMG/M
3300031744\|Ga0306918_10102928	Not Available	2036	Open in IMG/M
3300031751\|Ga0318494_10219274	Not Available	1087	Open in IMG/M
3300031754\|Ga0307475_11063019	Not Available	634	Open in IMG/M
3300031770\|Ga0318521_10429225	Not Available	790	Open in IMG/M
3300031771\|Ga0318546_10430856	Not Available	922	Open in IMG/M
3300031823\|Ga0307478_11068714	Not Available	674	Open in IMG/M
3300031890\|Ga0306925_10896831	Not Available	912	Open in IMG/M
3300031896\|Ga0318551_10489506	Not Available	705	Open in IMG/M
3300031897\|Ga0318520_10949208	Not Available	542	Open in IMG/M
3300031910\|Ga0306923_10924108	All Organisms → cellular organisms → Bacteria → Proteobacteria	954	Open in IMG/M
3300031910\|Ga0306923_11447173	Not Available	721	Open in IMG/M
3300031962\|Ga0307479_11735015	Not Available	577	Open in IMG/M
3300031981\|Ga0318531_10423661	Not Available	602	Open in IMG/M
3300032041\|Ga0318549_10171240	Not Available	971	Open in IMG/M
3300032052\|Ga0318506_10253667	Not Available	779	Open in IMG/M
3300032052\|Ga0318506_10364479	Not Available	641	Open in IMG/M
3300032064\|Ga0318510_10211014	Not Available	788	Open in IMG/M
3300032065\|Ga0318513_10388480	Not Available	681	Open in IMG/M
3300032076\|Ga0306924_10400913	Not Available	1570	Open in IMG/M
3300032091\|Ga0318577_10071871	Not Available	1587	Open in IMG/M
3300032180\|Ga0307471_100158784	Not Available	2190	Open in IMG/M
3300032205\|Ga0307472_101014053	Not Available	779	Open in IMG/M
3300032261\|Ga0306920_100588312	Not Available	1647	Open in IMG/M
3300033289\|Ga0310914_10227796	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1670	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.30%
Host-Associated	Host-Associated	0.70%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	97.90%
Aquatic	Environmental → Aquatic	1.40%
Fungi	Host-Associated → Fungi	0.70%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	97.90%
Freshwater	Environmental → Aquatic → Freshwater	1.40%
Mycelium	Host-Associated → Fungi → Mycelium	0.70%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	62.24%
Loam	Environmental → Terrestrial → Soil → Loam	27.97%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	7.69%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	1.40%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified	0.70%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	39.16%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	22.38%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	20.28%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	7.69%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.90%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.80%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	1.40%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.70%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified	0.70%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	24.48%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	20.28%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	19.58%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	10.49%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	7.69%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.50%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.50%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.10%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.10%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	1.40%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	1.40%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.70%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.70%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.70%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.70%
Attine Ant Fungus Gardens	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified → Attine Ant Fungus Gardens	0.70%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000655	Forest soil microbial communities from Amazon forest - 2010 replicate II A100	Environmental	Open in IMG/M
3300001867	Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)	Environmental	Open in IMG/M
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119	Environmental	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010863	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (PacBio error correction)	Environmental	Open in IMG/M
3300012677	Attine ant fungus gardens microbial communities from New Jersey, USA - TSNJ012 MetaG	Host-Associated	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300017924	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_5	Environmental	Open in IMG/M
3300017928	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_1	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300017973	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MG	Environmental	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300017999	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP10_10_MG	Environmental	Open in IMG/M
3300018058	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MG	Environmental	Open in IMG/M
3300018060	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MG	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300020150	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP10_20_MG	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026723	Grasslands soil microbial communities from Chapel Hill, North Carolina, USA that are Nitrogen fertilized - NN357 (SPAdes)	Environmental	Open in IMG/M
3300026896	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 71 (SPAdes)	Environmental	Open in IMG/M
3300026898	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 79 (SPAdes)	Environmental	Open in IMG/M
3300026959	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 3 (SPAdes)	Environmental	Open in IMG/M
3300026979	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 13 (SPAdes)	Environmental	Open in IMG/M
3300026997	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 66 (SPAdes)	Environmental	Open in IMG/M
3300027003	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 26 (SPAdes)	Environmental	Open in IMG/M
3300027090	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF016 (SPAdes)	Environmental	Open in IMG/M
3300027313	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 45 (SPAdes)	Environmental	Open in IMG/M
3300027680	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 80 (SPAdes)	Environmental	Open in IMG/M
3300027703	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 81 (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300031981	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25	Environmental	Open in IMG/M
3300032041	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f22	Environmental	Open in IMG/M
3300032052	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19	Environmental	Open in IMG/M
3300032064	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f17	Environmental	Open in IMG/M
3300032065	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
AF_2010_repII_A100DRAFT_10092172	3300000655	Forest Soil	MKSFGNTIHWFGYVMAATLLVIGLFDYWFGDHHLTAFLSWAVLAAIPWLVGRASLYVMARR*
JGI12627J18819_102924201	3300001867	Forest Soil	MKNLGNTIYSFSCILAATLLGIGVADYWFGHHQLTAFLSWAVLAAIPWLV
JGIcombinedJ51221_100413583	3300003505	Forest Soil	MKNLGNTIYSFSCVVAATLLGIGIADYWFGHQQLTAFLSWAVLAAIAWLVGRASLYVLARR*
Ga0066395_101733132	3300004633	Tropical Forest Soil	MKSFGNTIHWFGYVMAATLLVIGLFDYWFGDHHLTAFLSWAVLAAIPWLVGRASLYVLARR*
Ga0066395_104445411	3300004633	Tropical Forest Soil	MKELGNTIYAFCCVVAATVLGLGVFDYWFGNHQLTSFLSWAVLGAIPWLVGFASSYVLARSK*
Ga0066675_105015301	3300005187	Soil	MKSFGNTIYAFACIVAATVLGIGIANYWFGQHQLTAFLSWAVLAAIPWPVGRASLLVLARR*
Ga0066388_1002921196	3300005332	Tropical Forest Soil	MKDFGNTIYAFGCVVAATVLGLGVFDYWFGHHQLTAFLSWAALAAIPWLVGFASSYILARGK*
Ga0066388_1007850684	3300005332	Tropical Forest Soil	MKDLGNTIYSFGCVVAATVLGIGIADYWFGHHQMIAFLSWAVLAAIPWLIGRASLYVLARR*
Ga0066388_1018188174	3300005332	Tropical Forest Soil	MKDFGNTIYAFGCVVAATVLGIGVADYWFGHHELTAFLSWAVLAVITWLVGFASSYVLARY*
Ga0066388_1046253162	3300005332	Tropical Forest Soil	MRSLANAIYWFGCVVAVTLLVIGVFDYWFGDHHLAALLSWAILAAIPWLVGWLFGSLGRRFSE*
Ga0066388_1078422931	3300005332	Tropical Forest Soil	MKDFGKTIYWFSCVVAATFLGIGLADYWLGHHQFTAFLSWAVLAAIPWLVGRASLFVLAGLA
Ga0070714_1013863292	3300005435	Agricultural Soil	MKDFGNTIYWISCVVAATILGLGAADYLYGHHQFTAFLSWAVLAVVPWLVGRASLFLLARR*
Ga0070713_1005153651	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	NTIYAFGCVAAATVLGIGFADYWFGHHQLTAFLSWAVLAAIPWLVGRASLYVLAS*
Ga0066670_110033341	3300005560	Soil	MKSFGNTIYAFACIVAATVLGIGIADYWFGQHQLTAFLSWAVLAAIPWPVGRASLLVLARR*
Ga0066705_103277491	3300005569	Soil	MKSFGNTIYAFACIVAATVLGIVLLTIGSASTLTAFLSWAVLAAIPWPVGRASLLVLARR
Ga0066903_1002165235	3300005764	Tropical Forest Soil	MKDLGNTIYSFGCVVAATVLGIGVADYWFGQHQLTTFLSWAVLAAIPWLVSLASWYVLARR*
Ga0066903_1010542551	3300005764	Tropical Forest Soil	MKELGNTIYCFGCVVAATLLGIGVADYWFGDHHLTAFLSWAVLAAIPWLV
Ga0066903_1011614052	3300005764	Tropical Forest Soil	MKNFGNTIYWIGCVVAATILGLGAADDLYGHHQFTAFLSWAVLAVIPWLVGRASLFLLARR*
Ga0066903_1012533332	3300005764	Tropical Forest Soil	MKDLGNTIYWFCWLVTATFLGIGVADYWFGNHQMIAFLSWAVLAAIPWLIGRASLYVLARRH*
Ga0066903_1017529922	3300005764	Tropical Forest Soil	MRNFGNTIYWFGCVVAATLLVIGVFDYWFGDAHLTAFLSWALLAVIPWLVGWLVVSLGRGFSE*
Ga0066903_1019101962	3300005764	Tropical Forest Soil	MKDLGNTIYWFCWLVTATFLGIGVADYWFGNHQMIAFFSWAVLAAIPWLVGRASLYVLARRH*
Ga0066903_1026487544	3300005764	Tropical Forest Soil	WFGYVVAATLLVIGLFDYWFGDHHLTAFLSWAVLAAIPWPVGRASLYVMARR*
Ga0066903_1064843282	3300005764	Tropical Forest Soil	MQDLGKRIYWFGCFVAATVLGIGVVDYWSNDHRLTAFLSWAVLAAITWLVGRASLFVLARR*
Ga0066903_1067515831	3300005764	Tropical Forest Soil	GAMGNPGNTIYWFCCVVAATVLGIGVADYWFGDHKLTALLSWAVLAVIPWLVGRASLYLLAHR*
Ga0070712_1000425444	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	LGLLALGAANMKDLGNTVYSFGCVVAATVLGIGIADYWFGHHQMTAFLSWAVLAAIPWLIGRASLYVLVRR*
Ga0070712_1000606096	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MKDLGKKIYSFGYVVAATVLVIGVADYWFGNHQLTAFLSWAVLATIPWLVGRASLFVLARR*
Ga0126374_108099461	3300009792	Tropical Forest Soil	MKNFGKTIYWFGGVVAATFVGIGLADYWFGHHDFTAFLSWAVLAAIPWLVGRAS
Ga0126384_114613181	3300010046	Tropical Forest Soil	GGAMSSFGNTIYWFGCVVAATLLVIGVFDYWFGDHHLTAFLSWAVLAAIPWLVGRASLYVLARR*
Ga0126384_124359331	3300010046	Tropical Forest Soil	MKDFGKTIYWFGCVVAATFLGIGLADYWFGQHQFTAFLSWAVLAAIPWLVGRASLFV
Ga0126373_100365947	3300010048	Tropical Forest Soil	MNDLGNTIYAFGCAVAATVLGIGIADYWFGHHELTAFLSWAVSAAILWLVSRASLYVLARR*
Ga0126373_101158151	3300010048	Tropical Forest Soil	MGNLGNTINWFCSVVAATLFVIGVADYWFGEHHLTAFLSWAVLAAIPWLVGRASLLILARR*
Ga0126373_102023924	3300010048	Tropical Forest Soil	MQDLGKRIYWAGCVVAATVLGIGVVDYWSNDHRLTAFLSWAVLAAIPWLVGRASLYVLARR*
Ga0126373_122840912	3300010048	Tropical Forest Soil	YWFGCVVAATLLGIGVADYWFGDHHLTAFLSWAGLAVICWLIGRASLLILARR*
Ga0126370_100285133	3300010358	Tropical Forest Soil	MKSFGNTIHWFGYVVAATLLVIGLFDYWFGDHHLTAFLSWAVLAAIPWLVGRASLYVLARR*
Ga0126370_119648561	3300010358	Tropical Forest Soil	MKDFGNTIYAFGCVVAATVLVLGVFDYWFGHHQLTAFLSWAALAAIPWLVGFASSYILARGK*
Ga0126370_123629332	3300010358	Tropical Forest Soil	MRNFGNTIYWFGCVVAATLLVIGVFDCWFGDAHLTAFLSWALLAVIPWLVGWLVVSLGRGFSE*
Ga0126372_108606521	3300010360	Tropical Forest Soil	MQDLGKRIYWFGCVVAATVLRIGVADYWSNDHRLAAFLSWAVLAAIPWLVGRVRLSVCS*
Ga0126378_104218582	3300010361	Tropical Forest Soil	MKDLGNTIYWFCWFMTATFLGIGVADHWFGNRQMIAFFSWAVLAAIPWLVGRASLYVLSRRY*
Ga0126379_117332991	3300010366	Tropical Forest Soil	HMKELGNTIYWFGCVVAATLLGIGVADYWFGDHHLTAFLSWAVLAAILWLVGRASLLVLARR*
Ga0126379_125902311	3300010366	Tropical Forest Soil	MKDLGNTIYWFCWFMTATFLGIGVADHWFGNRQMIAFFSWAVLAAIPWLVGRASLYVLARR*
Ga0126379_135899112	3300010366	Tropical Forest Soil	MKDLGNKIYAFGCVVAATVLGLGVADYWFGHHRLTAVLSWAVLAVIPWLVGFASSYVLARR*
Ga0126381_1000406784	3300010376	Tropical Forest Soil	MQDFGNTIYAFGCVMAATVLGLGVADYWFGHRQLTAFLSWAVLAAIPWLVGYASSYVLARGK*
Ga0126381_1000766094	3300010376	Tropical Forest Soil	MKSFGNTIYAFACIVAATVLGIGIADYWFGQHQLTAFLSWAVLAAIPWLVGRASLLVLSRR*
Ga0126381_1025652671	3300010376	Tropical Forest Soil	MKDFGNTIYAFGCVVAATVLGLGVFDYWFGHHQLTAFLAWAALAAIPWLVGFASSYILARGK*
Ga0126381_1032217471	3300010376	Tropical Forest Soil	MKNFGKTIYWFGGVVAATFVGIDADYWFGHHDFTAFLSWAVLAAIPWLVG
Ga0126381_1032330282	3300010376	Tropical Forest Soil	MKELANTIYWFGCVVAATVLGIGVVDYWFNDHKLTALLSWAVLAALPWLVGRASLFVLAVGARSPHKVKNSD
Ga0124850_10068201	3300010863	Tropical Forest Soil	AGALTTCRTLEIPAFGCVMAATVLGLGVADYWFGHRQLTAFLSWAVLAAIPWLVGYASSYVLARGK*
Ga0153928_10284271	3300012677	Attine Ant Fungus Gardens	MKDLGNTIYSFGCVVAATVLGIGIADYWFGHHQMTAFLSWAVLAAIPW
Ga0126375_111860811	3300012948	Tropical Forest Soil	MKDFGKTIYWFGCVVAATFLGIGLADYWFGQHQFTAFLSWAVLAAIPWL
Ga0126375_120390691	3300012948	Tropical Forest Soil	MKELGNIIYWFGCVVAATLLVIGVADYWFGGHHLTAFLSWAVLAAIPWLV
Ga0126369_102860432	3300012971	Tropical Forest Soil	MNDLGNTIYAFGCAVAATVLGIGIADYWFGHHELTAFLSWAVSATILWLVSRASLYVLARR*
Ga0182036_116173791	3300016270	Soil	MKELGNIIYWFGCVVAATLLVIGVFDYWFGGHHLTAFLSWAMLAAIPWLVGRASLFVLALGARSPHKV
Ga0182041_102744483	3300016294	Soil	LALCINYGGLCFRGALTHAGPHMQDLGKRIYWFGCFVAATVLGIGVVDYWSNDHRLTAFLSWAVLAAITWLVGRASLFVLARR
Ga0182032_100088051	3300016357	Soil	MQDLGKRIYWFGCVVAATVLGIGVVDYWSNDHRLTAFLSWAVLAAIPWLVGRASLYVLAR
Ga0182032_104814692	3300016357	Soil	MKDLGNTIYRFSCVVAATVLGIGVADYWFGDRHLTAFLFWAVLATVPWLVGRASLYVLAR
Ga0182032_113018762	3300016357	Soil	MQDLGKRIYWFGCFVAATVLGIGVVDYWSNDHRLTAFLSWAVLAAIPWLVGRASLFVLAR
Ga0182034_107747212	3300016371	Soil	MKDLGNTIYRFSCVVAATVLGIGVADYWFGDRHLTAFLSWAVLAAIPWLVGR
Ga0182034_119719831	3300016371	Soil	MKELGNTIYWFGCVVAATLLGIGVADYWFGDHHLTAFLSWAVLAAIPWLIGRASLFVLALGTRSPHKVKT
Ga0182039_112860911	3300016422	Soil	MKELGNTIYWFGCVVAATLLGIGVADYWFGDHHLTAFLSWAVLAAIPWLVGRASLYVLA
Ga0187820_11340321	3300017924	Freshwater Sediment	MKDLGNTIYLWGCVVAATILAVGVADYWFGQGRLSAFLSWVVIAAIPWLVG
Ga0187806_11731431	3300017928	Freshwater Sediment	MKDFGNTIYTAACVVAATILGIGVADYWFASHQFSAFFSWAVLAAIPWLIGRASLY
Ga0187779_100984693	3300017959	Tropical Peatland	MKDLGNTIYAFGCIVAATVLGVGIADYWFGHHELAAFLSWALLAVIPWLVGFASSY
Ga0187780_103670492	3300017973	Tropical Peatland	MKDLGNTIYVFGCIVAATVLGVGIADYWFGHHELAAFLSWALLALIPWLVGFASSYFLVR
Ga0187777_100216104	3300017974	Tropical Peatland	MKDFGDTIYASACVVAATILGVAVADCWFGHHQFSVFLSWAVLSTIAWLGGRACLYVLAR
Ga0187777_107023081	3300017974	Tropical Peatland	MKDLGNTIYAFGCIVAATVLGVGIADYWFGHHELAAFLSWALLALIPWLVGFASSYVLVR
Ga0187767_101874891	3300017999	Tropical Peatland	MKDLGSTIYVLGCVVAATILGLGVADYWAGYRQFTAFLFWVVLAAITWLVSRVALY
Ga0187767_103337121	3300017999	Tropical Peatland	MKDFGNAIYAFGCVVAATLLGIGVADYWFGHHELTAFLSWAVLAVIPWLVGFASSYVLAR
Ga0187766_100969765	3300018058	Tropical Peatland	FGCVVAATLLVIGLFDYWFGDHHFTAFLSWAVLAVIPWLVGWLFCSLGQRFSE
Ga0187766_101346892	3300018058	Tropical Peatland	MKDLGNTIYAFGCVVAATVLGLGVADYWFGHHELTAFLSWALLAVIPWLVGFASSYVLAR
Ga0187765_100053425	3300018060	Tropical Peatland	MRNLGNTIYWFGCVVAATLLVIGLFDYWFGDHHFTAFLSWAVLAVIPWLVGWLFCSLGQRFSE
Ga0066655_104088381	3300018431	Grasslands Soil	MKSFGNTIYAFACIVAATVLGIGIADYWFGQHQLTAFLSWAVLAAIPWPVGRASLLVLAR
Ga0187768_10693051	3300020150	Tropical Peatland	MRNLGNTIYWFGCVVAATLLVIGLFDYWFGDHHFTAFLSWAVLAVIPWLVGWLFCSLGQR
Ga0187768_11507272	3300020150	Tropical Peatland	MKDLGNTIYAFGCVVAATVLGLGVADYWFGHHELTAFLSWALLAVIPWLV
Ga0210407_109854941	3300020579	Soil	GSDSGASQHMKNLGNTIYSFSCVVAATLLGIGIADYWFGHQQLTAFLSWAVLAAIAWLVGRASLYVLARR
Ga0210403_101423262	3300020580	Soil	MKDFGNTIYAFGCVVAATVLGIGIADYWFGHHQLTAFLSWAVMAAIPWLIGRASLYVLAR
Ga0210403_101475953	3300020580	Soil	MKNLGNTIYSFSCVVAATLLGIGIADYWFGHQQLTAFLSWAVLAAIAWLVGRASLYVLAR
Ga0210403_102800742	3300020580	Soil	MKDLGNTIYSFGCVVAATVLGIGIADYWFGHHQMTAFLSWAVLAAIPWLIGRASLYVLVR
Ga0210403_111534571	3300020580	Soil	MKDLGNTIYAFGCVAAATVLGIGFADYWFGHHQLTAFLSWAVLAAIPWLVGRASLYVLAS
Ga0210399_105056732	3300020581	Soil	MKDFGNTIYAFGCVVAATVLGIGIADYWFGHHQLTAFLSWAVTAAIPWL
Ga0210406_111473051	3300021168	Soil	MKHLGNTIYSFGCVVAATVLGIGIADYWFGHHQMTAFLSWAVLAAIPWLIGRASLYVLVR
Ga0210387_117110152	3300021405	Soil	MKDFGNTIYAFGCVVAATVLGIGIADHWFGHHQLTAFLSWAVMAAIPWLIG
Ga0210394_101691551	3300021420	Soil	MKDFGNTVYAFGCVVAATVLGIGIADYWFGHHQMTAFLSWAVLAAIPWLIGRASLYVLVR
Ga0210394_103691054	3300021420	Soil	MKDFGNTIYAFGCVLAATVLGIGVADYWFGHHQVTAFLSWAVMAAILWLIGRASLYVLAR
Ga0126371_104399163	3300021560	Tropical Forest Soil	MKELGNTIYAFCCVVAATVLGLGVFDYWFGNHQLTSFLSWAVLGAIPWLVGFASSYVLARSK
Ga0126371_107883641	3300021560	Tropical Forest Soil	MKSFGNTIYAFACIVAATVLGIGIADYWFGQHQLTAFLSWAVLAAIPWLVGRASLLVLSR
Ga0126371_117434892	3300021560	Tropical Forest Soil	MKDLGNTIYSFGCVVAATVLGIGVADYWFGHHQLTAFLSWAVLAAIPWLIGRASLYVLAR
Ga0126371_118237951	3300021560	Tropical Forest Soil	MQDLGKRIYWFGCFVAATVLGIGVVDYWSNDHRLTAFLSWAVLAAITWLVGRASLFVLAR
Ga0126371_121636431	3300021560	Tropical Forest Soil	MKSFGNTIHWFGYVVAATLLVIGLFDYWFGDHHLTAFLSWAVLAAIPWLVGRASLYVMAR
Ga0207693_101874251	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	KPQAHLGLLALGAANMKDLGNTVYSFGCVVAATVLGIGIADYWFGHHQMTAFLSWAVLAAIPWLIGRASLYVLVRR
Ga0207664_117373681	3300025929	Agricultural Soil	VKDFGNTIYSFSCVVAATVIGISFADYWFGRHQLTAFLSWAVLATIPWLVGRASLFVLGGRSPHW
Ga0207665_100657212	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MKDLDNTIYAFGCVAAATVLGIGFADYWFGHHQLTAFLSWAVLAAIPWLVGRASLYVLAS
Ga0208342_1014553	3300026723	Soil	MKDLGNTIYAFGCVAAATVFGIGIADYWFGHHQMTAFLSWAVLATIPWLVGRASLFVLAR
Ga0207730_10178922	3300026896	Tropical Forest Soil	MKDLGNTICSFGYVVAATVLGIGVADYWFGNHQFTAFLSWAALATIPWLVGRASLYVLAR
Ga0207788_10275672	3300026898	Tropical Forest Soil	MKDLGNTICSFGYVVAATVLGIGVADYWFGNHQFTAFLSWAALATIPWLVG
Ga0207852_10211372	3300026959	Tropical Forest Soil	MKDFGDAIYAFGCVVAATLLGIGVADYWFGHRELTAFLSWAVLAVIPWLVGFASSYVLA
Ga0207817_10068161	3300026979	Tropical Forest Soil	MKDLGNTICSFGYVVAATVLGIGVADYWFGNHQFTAFLSWAALATIPWLVGRASLYVLARLG
Ga0207784_10060062	3300026997	Tropical Forest Soil	MKDVGKTINSFGYVVAATVLGIGVADYWFGHHQLTALLSWVVLAAIPWLVGCASLYVLAR
Ga0207722_10163462	3300027003	Tropical Forest Soil	MKDLGNTICSFGYVVAATVLGIGVADYWFGNHQFTAFLSWAALATIPWLVGRASLYVL
Ga0208604_10053092	3300027090	Forest Soil	MKDLGNTIYAFGYVVAATVLGIGVADYWFGNHQLTAFLSWAVLATIPWLVGRASLYVLAR
Ga0207780_10152034	3300027313	Tropical Forest Soil	MKDLGNTICSFGYVVAATVLGIGVADYWFGNHQLTAFLSWAALATIPWLVGRASLYVLA
Ga0207826_10435481	3300027680	Tropical Forest Soil	LGNTIYAFGCVVAATVLGIGVADYWFGHHQLTALLSWVVLAAIPWLVGCASLYVLARR
Ga0207862_11252351	3300027703	Tropical Forest Soil	MKDLGNTIYAFGCVVAATVLGIGVADYWFGHHQLTAFFSWAVLAAIPWLVGFASSYVLAR
Ga0207862_11530341	3300027703	Tropical Forest Soil	MKDFGNTIYAFGCVVAATVLGIGIADYWFGNHQLTAFLSWAVLATIPWLVGFASSYVLGRRN
Ga0209465_100639281	3300027874	Tropical Forest Soil	TLEIPAFGCVMAATVLGLGVADYWFGHRQLTAFLSWAVLAAIPWLVGYASSYVLARGK
Ga0209465_103517731	3300027874	Tropical Forest Soil	MKELGNIIYWFGCVVAATLLVIGVFDYWFGGHHLTAFLSWAVLAAIPWLVGRASLFVL
Ga0318541_100007743	3300031545	Soil	MQDLGKRIYWAGCVVAATVLGIGVVDYWSNDHRLTAFLSWAVLAAIPWLVGRVSLYVLAR
Ga0318541_100355193	3300031545	Soil	MQDLGKRIYWFGCVVAATVLRIGVADYWSNDHRLAAFLSWAVLAAIPWLVGRVRLSVCS
Ga0318541_105179471	3300031545	Soil	MKELGNIIYWFGSVVAATLLVIGVFDYWFGGHHLTTFLSWAVLAAIPWLVGRASLY
Ga0318538_100165937	3300031546	Soil	MQDLGKRIYWAGCVVAATVLGIGVVDYWSNDHRLTAFLSWAVLAAIPWLVGRASLYVLAR
Ga0318538_104103722	3300031546	Soil	MKELGNIIYWFGCVVAATLLVIGVFDYWFGSHHLTAFLSWAVLAAIPWLVGRASLFVLALGARSPHK
Ga0318528_106163021	3300031561	Soil	MKDLGNTIYRFSCVVAATVLGIGVADYWFGDRHLTAFLSWAVLATVPWLVGRASLYVLAR
Ga0310915_101557231	3300031573	Soil	MKDLGNTIYSFGHVLAATVFGIGVADYWFGNHRLTAFLSWVVLATIPWLVGRASLYVMAR
Ga0310915_107272432	3300031573	Soil	MKDVGKTINSFGYVVAATVLGIGVADYWFGNHQFTAFLSWAALATIPW
Ga0318542_103320151	3300031668	Soil	MQDLGKRIYWFGCVVAATVLRIGVADYWSNDHRLAAFLSWAVLAAIPWLVGRVRLTPTLLAAHA
Ga0318561_107444162	3300031679	Soil	MKELGNIIYWFGCVVAATLLVIGVFDYWFGGHHLTAFLSWAVLAAIPWLVGRASLFVLAL
Ga0318572_101671302	3300031681	Soil	MQDLGKRIYWFGCVVAATVLRIGVADYGSNDHRLAAFLSWAVLAAIPWLVGRVRLSVCS
Ga0310686_1019969573	3300031708	Soil	MKDLGNTIYLWGCVVAATILGVGIADYWFGQGRLSVFLSWVVIAVIPWLVGRASLYVLARVKWVDNLPVQHRDTL
Ga0306917_106048681	3300031719	Soil	MKDFGNTIYGFGCIVAATVLGIGVADYWFGHHELTAFLSWAVLAAIPWLVGRASLYVLAR
Ga0318493_107577352	3300031723	Soil	THAGPHMQDLGKRIYWFGCFVAATVLGIGVVDYWSNDHRLTAFLSWAVLAAITWLVGRASLFVLARR
Ga0306918_101029282	3300031744	Soil	MKDLGNTIYSFGCVVAATVLGIGVADYWFGHHQLTAFLSWAVLAAIPWLVGRASLYVLAR
Ga0318494_102192742	3300031751	Soil	MQDLGKRIYWAGCVVAATVLGIGVVDYWSNDHRLTAFLSWAVLAAIPWLVGRTS
Ga0307475_110630191	3300031754	Hardwood Forest Soil	MKDLGNTIYSFGCVVAATVLGIGIADYWLGHHQMTAFLSWAVLAAIPWLIGRASLYVLVR
Ga0318521_104292252	3300031770	Soil	MKDFGNTIYAFGCVVAATVLGLGVADYWFGNHQLTAFLSWAVLATIPWLVGFASSYVLGRRN
Ga0318546_104308561	3300031771	Soil	YYRGLCFRGLQHMKDLGNTIYSFGCVVAATVLGIGVADYWFGHHQLTAFLSWAVLAAIPWLVGRASLYVLARR
Ga0307478_110687141	3300031823	Hardwood Forest Soil	WGRIQHMKDLGKKIYSFGYVVAATVLVIGVADYWFGNHQLTAFLSWAVLATIPWLVGRASLFVLARR
Ga0306925_108968311	3300031890	Soil	MKDFGNTIYGFGCIVAATVLGIGVADYWFGHHELTAFLSWAVLAAIPWLVGRA
Ga0318551_104895062	3300031896	Soil	INYGGLCFRGALTHAGPHMQDLGKRIYWFGCFVAATVLGIGVVDYWSNDHRLTAFLSWAVLAAITWLVGRASLFVLARR
Ga0318520_109492081	3300031897	Soil	MQDLGKRIYWFGCVVAATVLRIGVADYWSNDHRLAAFLSWAVLAAIPWVVGRVRLS
Ga0306923_109241082	3300031910	Soil	MKDLGNTIYAFGCVVTATVLGIGVADSWFGHHQLTAFLSWAVLAAIPWLVGRASLYVLAR
Ga0306923_114471731	3300031910	Soil	MKELGNIIYWFGCVVAATLLVIGVFDYWFGGHHLTAFLSWAVLAAIPWLVGRALLFLFSRDPLSA
Ga0307479_117350152	3300031962	Hardwood Forest Soil	MKDLGNTIHSFGCVVAATVLGIGIADYWFGHHQTTAFLSWAVLAAIPWLIGRASLYVLAR
Ga0318531_104236612	3300031981	Soil	MKDLGTRIYWFGCVVAATVLGIGVADCWFGHQLTAFLSWAVLASIPWLVGRASLYVLARY
Ga0318549_101712401	3300032041	Soil	MQDLGKRIYWAGCVVAATVLGIGVVDYWSNDHRLTAFLSWAVLAAIPWLVGRASLFVLAR
Ga0318506_102536671	3300032052	Soil	MKDFGKTIYWFGWVVAATFVGIGLADYWFGHHDFTAFLSWAVLAAIPWLVGRASLFV
Ga0318506_103644791	3300032052	Soil	AGPHMQDLGKRIYWFGCFVAATVLGIGVVDYWSNDHRLTAFLSWAVLAAITWLVGRASLFVLARR
Ga0318510_102110141	3300032064	Soil	MQDLGKRIYWAGCVVAATVLGIGVVDYWSNDHRLTAFLSWAVLAAIPWLV
Ga0318513_103884801	3300032065	Soil	MKDFGKTIYWFGWVVAATFVGIGLADYWFGHHDFTAFLSWAVLAAIPWLVGRASLF
Ga0306924_104009131	3300032076	Soil	VKELGNIIYWFGCVVAATLLVIGIFDYWFGGHHVTAFLSWAALAAIPWLVGRASLFVLALGAR
Ga0318577_100718711	3300032091	Soil	MQDLGKRIYWAGCVVAATVLGIGVVDYWSNDHRLTAFLSWAVLAAIPWLVGRASL
Ga0307471_1001587843	3300032180	Hardwood Forest Soil	MKDLGNRIYSFGCVVAATVLGIGIADYWFGHHQMTAFLSWAVLAAIPWLIGRASLYVLVR
Ga0307472_1010140532	3300032205	Hardwood Forest Soil	MKDLGKKIYSFGYVVAATVLGIGVADYWFGDHHLTAFLYWALLAAIPWLVGRASLYVLAR
Ga0306920_1005883122	3300032261	Soil	MKDLGNTIYAFGCVVTATVLGIGVADYWFGHHQLTALLSWAVLAAIPWLVGRA
Ga0310914_102277962	3300033289	Soil	MKDLGNTIYSFGHVLAATVFGIGVADYWFGNHRLTAFLSWVVLATIPWLVGHASLYVLAR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F052100

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences