NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F052108

Metagenome / Metatranscriptome Family F052108

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F052108
Family Type Metagenome / Metatranscriptome
Number of Sequences 143
Average Sequence Length 42 residues
Representative Sequence MNAPRVEPLRQVIAAEQIQKRVKELARHISDDYQGQTIQA
Number of Associated Samples 124
Number of Associated Scaffolds 143

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 97.20 %
% of genes near scaffold ends (potentially truncated) 99.30 %
% of genes from short scaffolds (< 2000 bps) 91.61 %
Associated GOLD sequencing projects 117
AlphaFold2 3D model prediction Yes
3D model pTM-score0.44

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (99.301 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil
(13.986 % of family members)
Environment Ontology (ENVO) Unclassified
(25.175 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(51.049 % of family members)


 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      

 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 26.47%    β-sheet: 0.00%    Coil/Unstructured: 73.53%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.44
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 143 Family Scaffolds
PF11734TilS_C 93.71
PF01171ATP_bind_3 2.10
PF07973tRNA_SAD 1.40
PF03129HGTP_anticodon 1.40
PF00436SSB 0.70
PF13302Acetyltransf_3 0.70

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 143 Family Scaffolds
COG0037tRNA(Ile)-lysidine synthase TilS/MesJTranslation, ribosomal structure and biogenesis [J] 2.10
COG0301Adenylyl- and sulfurtransferase ThiI (thiamine and tRNA 4-thiouridine biosynthesis)Translation, ribosomal structure and biogenesis [J] 2.10
COG0482tRNA U34 2-thiouridine synthase MnmA/TrmU, contains the PP-loop ATPase domainTranslation, ribosomal structure and biogenesis [J] 2.10
COG0519GMP synthase, PP-ATPase domain/subunitNucleotide transport and metabolism [F] 2.10
COG06037-cyano-7-deazaguanine synthase (queuosine biosynthesis)Translation, ribosomal structure and biogenesis [J] 2.10
COG1606ATP-utilizing enzyme, PP-loop superfamilyGeneral function prediction only [R] 2.10
COG0124Histidyl-tRNA synthetaseTranslation, ribosomal structure and biogenesis [J] 1.40
COG0423Glycyl-tRNA synthetase, class IITranslation, ribosomal structure and biogenesis [J] 1.40
COG0441Threonyl-tRNA synthetaseTranslation, ribosomal structure and biogenesis [J] 1.40
COG0442Prolyl-tRNA synthetaseTranslation, ribosomal structure and biogenesis [J] 1.40
COG0629Single-stranded DNA-binding proteinReplication, recombination and repair [L] 0.70
COG2965Primosomal replication protein NReplication, recombination and repair [L] 0.70

 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms99.30 %
UnclassifiedrootN/A0.70 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000567|JGI12270J11330_10132075All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis985Open in IMG/M
3300001170|JGI12704J13340_1005833All Organisms → cellular organisms → Bacteria1160Open in IMG/M
3300004092|Ga0062389_100079724All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae2794Open in IMG/M
3300004635|Ga0062388_100535337All Organisms → cellular organisms → Bacteria1057Open in IMG/M
3300005176|Ga0066679_11033488All Organisms → cellular organisms → Bacteria510Open in IMG/M
3300005435|Ga0070714_101143674All Organisms → cellular organisms → Bacteria759Open in IMG/M
3300005529|Ga0070741_10684482All Organisms → cellular organisms → Bacteria906Open in IMG/M
3300005542|Ga0070732_10088141All Organisms → cellular organisms → Bacteria → Proteobacteria1820Open in IMG/M
3300005559|Ga0066700_10430753All Organisms → cellular organisms → Bacteria928Open in IMG/M
3300005602|Ga0070762_10691104All Organisms → cellular organisms → Bacteria684Open in IMG/M
3300005764|Ga0066903_101132015All Organisms → cellular organisms → Bacteria1446Open in IMG/M
3300006052|Ga0075029_101143953All Organisms → cellular organisms → Bacteria542Open in IMG/M
3300006174|Ga0075014_100555464All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia650Open in IMG/M
3300006176|Ga0070765_100303504All Organisms → cellular organisms → Bacteria1476Open in IMG/M
3300009090|Ga0099827_10146504All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1929Open in IMG/M
3300009523|Ga0116221_1403952All Organisms → cellular organisms → Bacteria → Acidobacteria594Open in IMG/M
3300009700|Ga0116217_10786170All Organisms → cellular organisms → Bacteria586Open in IMG/M
3300009759|Ga0116101_1007867All Organisms → cellular organisms → Bacteria → Acidobacteria1868Open in IMG/M
3300009824|Ga0116219_10113032All Organisms → cellular organisms → Bacteria → Acidobacteria1582Open in IMG/M
3300009839|Ga0116223_10138542All Organisms → cellular organisms → Bacteria → Acidobacteria1517Open in IMG/M
3300010361|Ga0126378_10856251All Organisms → cellular organisms → Bacteria1017Open in IMG/M
3300010379|Ga0136449_100247543All Organisms → cellular organisms → Bacteria → Acidobacteria3316Open in IMG/M
3300011269|Ga0137392_11269704All Organisms → cellular organisms → Bacteria → Acidobacteria595Open in IMG/M
3300011270|Ga0137391_11248179All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium590Open in IMG/M
3300011271|Ga0137393_10250286All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1504Open in IMG/M
3300011271|Ga0137393_10526475All Organisms → cellular organisms → Bacteria → Acidobacteria1014Open in IMG/M
3300012096|Ga0137389_11682012All Organisms → cellular organisms → Bacteria → Acidobacteria531Open in IMG/M
3300012199|Ga0137383_10358015All Organisms → cellular organisms → Bacteria → Acidobacteria1069Open in IMG/M
3300012357|Ga0137384_10309517All Organisms → cellular organisms → Bacteria → Acidobacteria1312Open in IMG/M
3300012469|Ga0150984_117524079All Organisms → cellular organisms → Bacteria → Acidobacteria583Open in IMG/M
3300012927|Ga0137416_11794790All Organisms → cellular organisms → Bacteria → Acidobacteria560Open in IMG/M
3300014155|Ga0181524_10422069All Organisms → cellular organisms → Bacteria → Acidobacteria578Open in IMG/M
3300014158|Ga0181521_10072819All Organisms → cellular organisms → Bacteria → Acidobacteria2223Open in IMG/M
3300014160|Ga0181517_10080495All Organisms → cellular organisms → Bacteria → Acidobacteria1930Open in IMG/M
3300014164|Ga0181532_10115004All Organisms → cellular organisms → Bacteria → Acidobacteria1657Open in IMG/M
3300014489|Ga0182018_10669393All Organisms → cellular organisms → Bacteria → Acidobacteria542Open in IMG/M
3300014654|Ga0181525_10071968All Organisms → cellular organisms → Bacteria → Acidobacteria1932Open in IMG/M
3300014657|Ga0181522_10087631All Organisms → cellular organisms → Bacteria → Acidobacteria1788Open in IMG/M
3300015054|Ga0137420_1074745All Organisms → cellular organisms → Bacteria → Acidobacteria800Open in IMG/M
3300015195|Ga0167658_1049679All Organisms → cellular organisms → Bacteria1033Open in IMG/M
3300015265|Ga0182005_1155653All Organisms → cellular organisms → Bacteria → Acidobacteria667Open in IMG/M
3300015374|Ga0132255_101922114All Organisms → cellular organisms → Bacteria → Acidobacteria900Open in IMG/M
3300016387|Ga0182040_11581807All Organisms → cellular organisms → Bacteria558Open in IMG/M
3300017933|Ga0187801_10175287All Organisms → cellular organisms → Bacteria → Acidobacteria843Open in IMG/M
3300017933|Ga0187801_10269885All Organisms → cellular organisms → Bacteria → Acidobacteria687Open in IMG/M
3300017938|Ga0187854_10291783All Organisms → cellular organisms → Bacteria → Acidobacteria699Open in IMG/M
3300017940|Ga0187853_10482254All Organisms → cellular organisms → Bacteria → Acidobacteria542Open in IMG/M
3300017943|Ga0187819_10281169All Organisms → cellular organisms → Bacteria → Acidobacteria969Open in IMG/M
3300017970|Ga0187783_10073137All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis2523Open in IMG/M
3300017970|Ga0187783_10277425All Organisms → cellular organisms → Bacteria → Acidobacteria1224Open in IMG/M
3300017970|Ga0187783_10399469All Organisms → cellular organisms → Bacteria → Acidobacteria999Open in IMG/M
3300017975|Ga0187782_11027542All Organisms → cellular organisms → Bacteria → Acidobacteria642Open in IMG/M
3300018002|Ga0187868_1013519All Organisms → cellular organisms → Bacteria → Acidobacteria4140Open in IMG/M
3300018009|Ga0187884_10392855All Organisms → cellular organisms → Bacteria → Acidobacteria558Open in IMG/M
3300018026|Ga0187857_10078159All Organisms → cellular organisms → Bacteria → Acidobacteria1638Open in IMG/M
3300018034|Ga0187863_10482998All Organisms → cellular organisms → Bacteria → Acidobacteria693Open in IMG/M
3300018042|Ga0187871_10146430All Organisms → cellular organisms → Bacteria → Acidobacteria1336Open in IMG/M
3300018043|Ga0187887_10165443All Organisms → cellular organisms → Bacteria → Acidobacteria1321Open in IMG/M
3300018062|Ga0187784_10504799All Organisms → cellular organisms → Bacteria → Acidobacteria974Open in IMG/M
3300018085|Ga0187772_10272170All Organisms → cellular organisms → Bacteria → Acidobacteria1155Open in IMG/M
3300018085|Ga0187772_10888327All Organisms → cellular organisms → Bacteria → Acidobacteria647Open in IMG/M
3300018086|Ga0187769_10219418All Organisms → cellular organisms → Bacteria → Acidobacteria1410Open in IMG/M
3300018088|Ga0187771_11246443All Organisms → cellular organisms → Bacteria → Acidobacteria631Open in IMG/M
3300018090|Ga0187770_10484906All Organisms → cellular organisms → Bacteria → Acidobacteria977Open in IMG/M
3300019082|Ga0187852_1432323All Organisms → cellular organisms → Bacteria511Open in IMG/M
3300019786|Ga0182025_1206268All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis1747Open in IMG/M
3300020580|Ga0210403_10300391All Organisms → cellular organisms → Bacteria → Acidobacteria1315Open in IMG/M
3300020581|Ga0210399_10039149All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae3796Open in IMG/M
3300021088|Ga0210404_10442375All Organisms → cellular organisms → Bacteria → Acidobacteria730Open in IMG/M
3300021180|Ga0210396_10093379All Organisms → cellular organisms → Bacteria → Acidobacteria2724Open in IMG/M
3300021181|Ga0210388_11546505All Organisms → cellular organisms → Bacteria → Acidobacteria553Open in IMG/M
3300021401|Ga0210393_10426781All Organisms → cellular organisms → Bacteria → Acidobacteria1081Open in IMG/M
3300021401|Ga0210393_11072903All Organisms → cellular organisms → Bacteria → Acidobacteria651Open in IMG/M
3300021403|Ga0210397_10112155All Organisms → cellular organisms → Bacteria → Acidobacteria1858Open in IMG/M
3300021403|Ga0210397_10912641All Organisms → cellular organisms → Bacteria → Acidobacteria680Open in IMG/M
3300021404|Ga0210389_11529854All Organisms → cellular organisms → Bacteria → Acidobacteria507Open in IMG/M
3300021405|Ga0210387_10197783All Organisms → cellular organisms → Bacteria1743Open in IMG/M
3300021405|Ga0210387_11691447All Organisms → cellular organisms → Bacteria536Open in IMG/M
3300021407|Ga0210383_10823324All Organisms → cellular organisms → Bacteria → Acidobacteria794Open in IMG/M
3300021420|Ga0210394_11699136All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium529Open in IMG/M
3300021474|Ga0210390_11196220All Organisms → cellular organisms → Bacteria → Acidobacteria614Open in IMG/M
3300021477|Ga0210398_11208074All Organisms → cellular organisms → Bacteria → Acidobacteria597Open in IMG/M
3300021479|Ga0210410_10317822All Organisms → cellular organisms → Bacteria → Acidobacteria1397Open in IMG/M
3300021479|Ga0210410_11105681All Organisms → cellular organisms → Bacteria → Acidobacteria683Open in IMG/M
3300021560|Ga0126371_11313233All Organisms → cellular organisms → Bacteria → Acidobacteria857Open in IMG/M
3300022523|Ga0242663_1042132All Organisms → cellular organisms → Bacteria → Acidobacteria778Open in IMG/M
3300022525|Ga0242656_1085218All Organisms → cellular organisms → Bacteria → Acidobacteria599Open in IMG/M
3300024176|Ga0224565_1018814All Organisms → cellular organisms → Bacteria → Acidobacteria748Open in IMG/M
3300025463|Ga0208193_1049067All Organisms → cellular organisms → Bacteria → Acidobacteria935Open in IMG/M
3300025928|Ga0207700_11507973All Organisms → cellular organisms → Bacteria → Acidobacteria596Open in IMG/M
3300025929|Ga0207664_10702869All Organisms → cellular organisms → Bacteria → Acidobacteria909Open in IMG/M
3300026215|Ga0209849_1087571All Organisms → cellular organisms → Bacteria → Acidobacteria550Open in IMG/M
3300027158|Ga0208725_1065600All Organisms → cellular organisms → Bacteria → Acidobacteria533Open in IMG/M
3300027376|Ga0209004_1066725All Organisms → cellular organisms → Bacteria → Acidobacteria608Open in IMG/M
3300027590|Ga0209116_1120984All Organisms → cellular organisms → Bacteria → Acidobacteria574Open in IMG/M
3300027842|Ga0209580_10667442All Organisms → cellular organisms → Bacteria → Acidobacteria514Open in IMG/M
3300027867|Ga0209167_10179501All Organisms → cellular organisms → Bacteria → Acidobacteria1122Open in IMG/M
3300027867|Ga0209167_10702461All Organisms → cellular organisms → Bacteria → Acidobacteria552Open in IMG/M
3300027884|Ga0209275_10077129All Organisms → cellular organisms → Bacteria → Acidobacteria1662Open in IMG/M
3300027884|Ga0209275_10274030All Organisms → cellular organisms → Bacteria → Acidobacteria931Open in IMG/M
3300027911|Ga0209698_10597057All Organisms → cellular organisms → Bacteria → Acidobacteria848Open in IMG/M
3300028731|Ga0302301_1107075All Organisms → cellular organisms → Bacteria → Acidobacteria714Open in IMG/M
3300028863|Ga0302218_10233445All Organisms → cellular organisms → Bacteria → Acidobacteria590Open in IMG/M
3300028882|Ga0302154_10562183All Organisms → cellular organisms → Bacteria → Acidobacteria539Open in IMG/M
3300029999|Ga0311339_10363257All Organisms → cellular organisms → Bacteria → Acidobacteria1525Open in IMG/M
3300030013|Ga0302178_10364532All Organisms → cellular organisms → Bacteria → Acidobacteria651Open in IMG/M
3300030056|Ga0302181_10489929All Organisms → cellular organisms → Bacteria → Acidobacteria519Open in IMG/M
3300030058|Ga0302179_10246259All Organisms → cellular organisms → Bacteria → Acidobacteria788Open in IMG/M
3300030494|Ga0310037_10247997All Organisms → cellular organisms → Bacteria → Acidobacteria773Open in IMG/M
3300030503|Ga0311370_12423982All Organisms → cellular organisms → Bacteria → Acidobacteria507Open in IMG/M
3300030520|Ga0311372_10833233All Organisms → cellular organisms → Bacteria → Acidobacteria1254Open in IMG/M
3300030617|Ga0311356_10567456All Organisms → cellular organisms → Bacteria → Acidobacteria1102Open in IMG/M
3300030707|Ga0310038_10050208All Organisms → cellular organisms → Bacteria → Acidobacteria2357Open in IMG/M
3300030940|Ga0265740_1027397All Organisms → cellular organisms → Bacteria → Acidobacteria618Open in IMG/M
3300031234|Ga0302325_10886597All Organisms → cellular organisms → Bacteria → Acidobacteria1241Open in IMG/M
3300031234|Ga0302325_11828132All Organisms → cellular organisms → Bacteria → Acidobacteria760Open in IMG/M
3300031446|Ga0170820_13552473All Organisms → cellular organisms → Bacteria → Acidobacteria806Open in IMG/M
3300031525|Ga0302326_10173101All Organisms → cellular organisms → Bacteria → Acidobacteria3665Open in IMG/M
3300031525|Ga0302326_12500552All Organisms → cellular organisms → Bacteria → Acidobacteria648Open in IMG/M
3300031616|Ga0307508_10782469All Organisms → cellular organisms → Bacteria → Acidobacteria570Open in IMG/M
3300031708|Ga0310686_105305231All Organisms → cellular organisms → Bacteria → Acidobacteria2230Open in IMG/M
3300031708|Ga0310686_108272270All Organisms → cellular organisms → Bacteria → Acidobacteria535Open in IMG/M
3300031708|Ga0310686_119700103All Organisms → cellular organisms → Bacteria → Acidobacteria1242Open in IMG/M
3300031715|Ga0307476_10248178All Organisms → cellular organisms → Bacteria → Acidobacteria1299Open in IMG/M
3300031718|Ga0307474_10049385All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis3104Open in IMG/M
3300031753|Ga0307477_10195124All Organisms → cellular organisms → Bacteria → Acidobacteria1409Open in IMG/M
3300031753|Ga0307477_10780870All Organisms → cellular organisms → Bacteria → Acidobacteria635Open in IMG/M
3300031823|Ga0307478_10969187All Organisms → cellular organisms → Bacteria → Acidobacteria711Open in IMG/M
3300031823|Ga0307478_11278014All Organisms → cellular organisms → Bacteria → Acidobacteria610Open in IMG/M
3300031823|Ga0307478_11385983All Organisms → cellular organisms → Bacteria → Acidobacteria583Open in IMG/M
3300031954|Ga0306926_10339923All Organisms → cellular organisms → Bacteria → Acidobacteria1857Open in IMG/M
3300032160|Ga0311301_10931074Not Available1164Open in IMG/M
3300032180|Ga0307471_100592121All Organisms → cellular organisms → Bacteria → Acidobacteria1267Open in IMG/M
3300032261|Ga0306920_100103026All Organisms → cellular organisms → Bacteria → Acidobacteria4226Open in IMG/M
3300032783|Ga0335079_10253925All Organisms → cellular organisms → Bacteria → Acidobacteria1932Open in IMG/M
3300032828|Ga0335080_10287714All Organisms → cellular organisms → Bacteria → Acidobacteria1788Open in IMG/M
3300032892|Ga0335081_10413497All Organisms → cellular organisms → Bacteria → Acidobacteria1730Open in IMG/M
3300032893|Ga0335069_10476134All Organisms → cellular organisms → Bacteria → Acidobacteria1452Open in IMG/M
3300032895|Ga0335074_10671661All Organisms → cellular organisms → Bacteria → Acidobacteria1008Open in IMG/M
3300032955|Ga0335076_11316274All Organisms → cellular organisms → Bacteria → Acidobacteria607Open in IMG/M
3300033475|Ga0310811_10385859All Organisms → cellular organisms → Bacteria → Acidobacteria1544Open in IMG/M
3300034163|Ga0370515_0222004All Organisms → cellular organisms → Bacteria → Acidobacteria803Open in IMG/M
3300034163|Ga0370515_0361677All Organisms → cellular organisms → Bacteria → Acidobacteria613Open in IMG/M


 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil13.99%
PalsaEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa9.09%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Peatland6.29%
Peatlands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil6.29%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil6.99%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland6.99%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil5.59%
BogEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog4.20%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil4.20%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil3.50%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil3.50%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil2.80%
SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Soil2.80%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment2.10%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds2.10%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil2.10%
Bog Forest SoilEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil1.40%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland1.40%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil1.40%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil1.40%
Untreated Peat SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil1.40%
Agricultural SoilEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil1.40%
Glacier Forefield SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil0.70%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil0.70%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Soil0.70%
PalsaEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa0.70%
PermafrostEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost0.70%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil0.70%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere0.70%
BogEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Bog0.70%
Plant LitterEnvironmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter0.70%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere0.70%
EctomycorrhizaHost-Associated → Plants → Roots → Unclassified → Unclassified → Ectomycorrhiza0.70%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere0.70%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere0.70%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000567Peat soil microbial communities from Weissenstadt, Germany - SII-2010EnvironmentalOpen in IMG/M
3300001170Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_O2EnvironmentalOpen in IMG/M
3300004092Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3EnvironmentalOpen in IMG/M
3300004635Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3EnvironmentalOpen in IMG/M
3300005176Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128EnvironmentalOpen in IMG/M
3300005435Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaGEnvironmentalOpen in IMG/M
3300005529Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1EnvironmentalOpen in IMG/M
3300005542Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1EnvironmentalOpen in IMG/M
3300005559Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149EnvironmentalOpen in IMG/M
3300005602Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2EnvironmentalOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300006052Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013EnvironmentalOpen in IMG/M
3300006174Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014EnvironmentalOpen in IMG/M
3300006176Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5EnvironmentalOpen in IMG/M
3300009090Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaGEnvironmentalOpen in IMG/M
3300009523Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_8_FC metaGEnvironmentalOpen in IMG/M
3300009700Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaGEnvironmentalOpen in IMG/M
3300009759Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_4_10EnvironmentalOpen in IMG/M
3300009824Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaGEnvironmentalOpen in IMG/M
3300009839Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaGEnvironmentalOpen in IMG/M
3300010361Tropical forest soil microbial communities from Panama - MetaG Plot_23EnvironmentalOpen in IMG/M
3300010379Sb_50d combined assemblyEnvironmentalOpen in IMG/M
3300011269Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaGEnvironmentalOpen in IMG/M
3300011270Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaGEnvironmentalOpen in IMG/M
3300011271Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaGEnvironmentalOpen in IMG/M
3300012096Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaGEnvironmentalOpen in IMG/M
3300012199Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaGEnvironmentalOpen in IMG/M
3300012357Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaGEnvironmentalOpen in IMG/M
3300012469Combined assembly of Soil carbon rhizosphereHost-AssociatedOpen in IMG/M
3300012927Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300014155Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_60_metaGEnvironmentalOpen in IMG/M
3300014158Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_60_metaGEnvironmentalOpen in IMG/M
3300014160Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_30_metaGEnvironmentalOpen in IMG/M
3300014164Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_30_metaGEnvironmentalOpen in IMG/M
3300014489Permafrost microbial communities from Stordalen Mire, Sweden - 812P2M metaGEnvironmentalOpen in IMG/M
3300014654Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_10_metaGEnvironmentalOpen in IMG/M
3300014657Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_10_metaGEnvironmentalOpen in IMG/M
3300015054Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300015195Arctic soil microbial communities from a glacier forefield, Storglaci?ren, Tarfala, Sweden (Sample st-6c, vegetation/snow interface)EnvironmentalOpen in IMG/M
3300015265Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaGHost-AssociatedOpen in IMG/M
3300015374Col-0 rhizosphere combined assemblyHost-AssociatedOpen in IMG/M
3300016387Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176EnvironmentalOpen in IMG/M
3300017933Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_1EnvironmentalOpen in IMG/M
3300017938Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_150EnvironmentalOpen in IMG/M
3300017940Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_100EnvironmentalOpen in IMG/M
3300017943Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4EnvironmentalOpen in IMG/M
3300017970Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MGEnvironmentalOpen in IMG/M
3300017975Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MGEnvironmentalOpen in IMG/M
3300018002Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_40EnvironmentalOpen in IMG/M
3300018009Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_40EnvironmentalOpen in IMG/M
3300018026Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_100EnvironmentalOpen in IMG/M
3300018034Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_10EnvironmentalOpen in IMG/M
3300018042Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_10EnvironmentalOpen in IMG/M
3300018043Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_10EnvironmentalOpen in IMG/M
3300018062Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MGEnvironmentalOpen in IMG/M
3300018085Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MGEnvironmentalOpen in IMG/M
3300018086Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MGEnvironmentalOpen in IMG/M
3300018088Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_10_MGEnvironmentalOpen in IMG/M
3300018090Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_20_MGEnvironmentalOpen in IMG/M
3300019082Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_40EnvironmentalOpen in IMG/M
3300019786Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (PacBio error correction)EnvironmentalOpen in IMG/M
3300020580Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-MEnvironmentalOpen in IMG/M
3300020581Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-MEnvironmentalOpen in IMG/M
3300021088Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-MEnvironmentalOpen in IMG/M
3300021180Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-OEnvironmentalOpen in IMG/M
3300021181Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-OEnvironmentalOpen in IMG/M
3300021401Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-OEnvironmentalOpen in IMG/M
3300021403Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-OEnvironmentalOpen in IMG/M
3300021404Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-OEnvironmentalOpen in IMG/M
3300021405Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-OEnvironmentalOpen in IMG/M
3300021407Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-OEnvironmentalOpen in IMG/M
3300021420Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-MEnvironmentalOpen in IMG/M
3300021474Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-OEnvironmentalOpen in IMG/M
3300021477Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-OEnvironmentalOpen in IMG/M
3300021479Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-MEnvironmentalOpen in IMG/M
3300021560Tropical forest soil microbial communities from Panama - MetaG Plot_4EnvironmentalOpen in IMG/M
3300022523Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-17-O (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022525Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-4-M (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300024176Spruce litter microbial communities from Bohemian Forest, Czech Republic ? CLU1EnvironmentalOpen in IMG/M
3300025463Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_10 (SPAdes)EnvironmentalOpen in IMG/M
3300025928Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025929Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026215Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 2 DNA2013-048 (SPAdes)EnvironmentalOpen in IMG/M
3300027158Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF011 (SPAdes)EnvironmentalOpen in IMG/M
3300027376Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_RefH0_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300027590Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_O1 (SPAdes)EnvironmentalOpen in IMG/M
3300027842Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)EnvironmentalOpen in IMG/M
3300027867Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1 (SPAdes)EnvironmentalOpen in IMG/M
3300027884Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)EnvironmentalOpen in IMG/M
3300027911Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)EnvironmentalOpen in IMG/M
3300028731Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E1_2EnvironmentalOpen in IMG/M
3300028863Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E1_1EnvironmentalOpen in IMG/M
3300028882Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N2_3EnvironmentalOpen in IMG/M
3300029999I_Palsa_E3 coassemblyEnvironmentalOpen in IMG/M
3300030013Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E1_3EnvironmentalOpen in IMG/M
3300030056Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E3_3EnvironmentalOpen in IMG/M
3300030058Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E3_1EnvironmentalOpen in IMG/M
3300030494Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG (v2)EnvironmentalOpen in IMG/M
3300030503III_Palsa_E3 coassemblyEnvironmentalOpen in IMG/M
3300030520III_Palsa_N2 coassemblyEnvironmentalOpen in IMG/M
3300030617II_Palsa_N2 coassemblyEnvironmentalOpen in IMG/M
3300030707Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG (v2)EnvironmentalOpen in IMG/M
3300030940Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSI1 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031234Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2EnvironmentalOpen in IMG/M
3300031446Fir Summer Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031525Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3EnvironmentalOpen in IMG/M
3300031616Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EMHost-AssociatedOpen in IMG/M
3300031708FICUS49499 Metagenome Czech Republic combined assemblyEnvironmentalOpen in IMG/M
3300031715Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05EnvironmentalOpen in IMG/M
3300031718Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05EnvironmentalOpen in IMG/M
3300031753Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515EnvironmentalOpen in IMG/M
3300031823Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05EnvironmentalOpen in IMG/M
3300031954Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)EnvironmentalOpen in IMG/M
3300032160Sb_50d combined assembly (MetaSPAdes)EnvironmentalOpen in IMG/M
3300032180Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515EnvironmentalOpen in IMG/M
3300032261Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)EnvironmentalOpen in IMG/M
3300032783Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3EnvironmentalOpen in IMG/M
3300032828Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4EnvironmentalOpen in IMG/M
3300032892Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5EnvironmentalOpen in IMG/M
3300032893Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1EnvironmentalOpen in IMG/M
3300032895Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.3EnvironmentalOpen in IMG/M
3300032955Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5EnvironmentalOpen in IMG/M
3300033475Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YCEnvironmentalOpen in IMG/M
3300034163Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_04D_14EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap


 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI12270J11330_1013207513300000567Peatlands SoilMSGARVEPLRQVITTEQIQKRVKELGRQISDDYKVETVEGQAIQVLAVLENAFMFL
JGI12704J13340_100583313300001170Forest SoilMNPTKSEPLRQVIAAEQIQKRVKELGRHISDDYQGQTVQALAVLENGF
Ga0062389_10007972413300004092Bog Forest SoilMNALKGAPLRQVIGAEQIQKRVKELARHISDDYQGQTIQALAVLENA
Ga0062388_10053533713300004635Bog Forest SoilMNGSKPGEGLRQVITTEQIQKRVKELGRQISDDYKGQTIQALAVLE
Ga0066679_1103348823300005176SoilMKDSRVEKDSRVEPLRQVIGSEQIQKRVKELGRQISVDYQGQTIQALAVL
Ga0070714_10114367423300005435Agricultural SoilMSAARVEPLRPVITTDQIQKRVKELGRQISDDYKGQTVQV
Ga0070741_1068448213300005529Surface SoilMSARVEPLRPIITTEQLQKRVKELGRQISDDYKGQTIQMLAVL
Ga0070732_1008814113300005542Surface SoilLSAARVEPLRPVITSEQIQKRVKELGRQISDDYKNQAGNGQPLQALAVLENGFMF
Ga0066700_1043075313300005559SoilMSATRVEPLRPVIPSDQIQKRVKELGRQISDDYKGQSIHALAVL
Ga0070762_1069110413300005602SoilMNELNAEPLRQVIAAEQIQKRVKELGRHISDDYRGQTIQAL
Ga0066903_10113201523300005764Tropical Forest SoilMSESRVEPLRQVISAEQIQKRIKELARQISDDYRGL
Ga0075029_10114395323300006052WatershedsMNARVEPLRQVIQAEQIQKRVRELARQISDDYRGLTIQMLAVLENAFM
Ga0075014_10055546413300006174WatershedsMSQTARVVPINPVISADQIEKRVKEMARQISDDYRGRTIHI
Ga0070765_10030350423300006176SoilMNRPKAESLRQVIAADQIQKRVKELARHISDDYEGQ
Ga0099827_1014650423300009090Vadose Zone SoilMQNPSGRVEPLRQIISAEQIQKRVKEIARQISDDYRGQTI
Ga0116221_140395213300009523Peatlands SoilMSGARVEPLRQVITTEQIQKRVKELGRQISDDYKGQTAGNQAVQVLAVLENAFM
Ga0116217_1078617013300009700Peatlands SoilLNRDVLEALGLMSAARVEPLRPVITSEQIQKRVKELGRQISDDYK
Ga0116101_100786723300009759PeatlandMNGPRVEPLRPVISTDQIQKRVKELARQISDYYKGQTIQML
Ga0116219_1011303223300009824Peatlands SoilMSGARVEPLRQVITTEQIQKRVKELGRQISDDYKGQTAGNQAVQVLAVLENAFMFLA
Ga0116223_1013854223300009839Peatlands SoilMSGARVEPLRQVITTEQIQKRVKELGRQISDDYKGQTAGNQAVQVLAV
Ga0126378_1085625113300010361Tropical Forest SoilMNQAAEVEQLRVVIPAEQIQKRVKEMGRQISDDYKGQTIHALAL
Ga0136449_10024754313300010379Peatlands SoilMNALKAAPLRQVIGAEQIQKRVKELARHISDDYQGQTIQAL
Ga0137392_1126970413300011269Vadose Zone SoilMSGSKVQSLRQVISTEQIQKRVKELERQISDDYKGNTIQALAVLEN
Ga0137391_1124817923300011270Vadose Zone SoilMQNPSGRVEPLRQIISAEQIQKRVKEIARQISDDYRGQTIHAL
Ga0137393_1025028613300011271Vadose Zone SoilMQNPSGRVEPLRQIISAEQIQKRVKEIARQISDDYRGQ
Ga0137393_1052647513300011271Vadose Zone SoilMNGSRIQSLRQVISTEHIQKRVKELGRQISDDYKGNTIQALAVL
Ga0137389_1168201213300012096Vadose Zone SoilMKDSRAEPLRQVIGSEQIQKRVKELGRQISVDYKGQTIQALAVLENGFI
Ga0137383_1035801513300012199Vadose Zone SoilMTGPRVEPLSQVITTDQIQKRVKELGRQISDDYKGQTI
Ga0137384_1030951713300012357Vadose Zone SoilMNAPRVDVLRPVITTDQIQKRVKELARQISDDYKG
Ga0150984_11752407923300012469Avena Fatua RhizosphereMNESRVEPLRQVISAEHIQKRVKELARQISDDYRGQTIQ
Ga0137416_1179479013300012927Vadose Zone SoilMKDSRIEPLRQVIGSEQIQKRVKELGRQISVDYKGQTIQ
Ga0181524_1042206913300014155BogMNATRVEPLRQVIAAEQIQKRVKELGRHISDDYKG
Ga0181521_1007281913300014158BogMSGARVEPLRQVITTEQIQKRVKELGRQISDDYRMDMVEGQAIQVLAVLENAFMFL
Ga0181517_1008049513300014160BogMNAARVEPLRQVIAAAQIQKRVKELGRHISDDYKGQTIQAL
Ga0181532_1011500423300014164BogMSAARVEPLRQVIAAEQIQKRVKELGRHISDDYKGQ
Ga0182018_1066939313300014489PalsaMNEPKAEPLRQVIAAEQIQKRIKEIARHISDDYRGQTIQALAVLENG
Ga0181525_1007196823300014654BogMNGPRVETLRQVIPAEQIQKRVKELARHISDDYQGQTIQALAVLEN
Ga0181522_1008763113300014657BogMEATGLMNAPRTEPLRQVIAAEQIQKRVKELGRHISDD
Ga0137420_107474523300015054Vadose Zone SoilMNGSKVQSLRQVISTEHIQKRVKELGRQISDDYKG
Ga0167658_104967913300015195Glacier Forefield SoilMNALKTDSLRQVIAAEQIQKRVKELGRHISDDYQGQTIQALAVL
Ga0182005_115565323300015265RhizosphereMSARVEPLRPIITTEQLQKRVKELGRQISDDYKGQTI*
Ga0132255_10192211413300015374Arabidopsis RhizosphereMTSSKAGAGRVVISSEQIQKRVKELARQISDDYRGQTVQMLAVLENAF
Ga0182040_1158180713300016387SoilMNTTSKAVNLRPVISAEQIQKRVRELARQISDDYQGKTLQALAVLENSFI
Ga0187801_1017528723300017933Freshwater SedimentMNASRVEPLRPVITTEQIQKRVKELARQISDDYQG
Ga0187801_1026988513300017933Freshwater SedimentMNGSRSEPLRQVITSEQIQKRVKELARQISDDYKGQTIQMLAVLEN
Ga0187854_1029178323300017938PeatlandMNAARVEPLRQVIAAAQIQKRVKELGRHISDDYKGQTIQALAVL
Ga0187853_1048225413300017940PeatlandMNAARVEPLRQVIAAAQIQKRVKELGRHISDDYKGQTIQALAVLENAF
Ga0187819_1028116913300017943Freshwater SedimentMNASRSETLRQVITSEQIQKRVKELARQISDDYKGQTIQMLAVLEN
Ga0187783_1007313733300017970Tropical PeatlandMSSSRTEPLRPVITAEQIQKRVKELGRQISDDYRGQTVQV
Ga0187783_1027742513300017970Tropical PeatlandLITPTKTESLRQVISAEQIQKRVKELARHISDDYRGQTIQALAVLENGFIF
Ga0187783_1039946913300017970Tropical PeatlandMNELKTETLRQVIGAEQIQKRVKELARHISDDYRGQTIQALAVLENAFI
Ga0187782_1102754213300017975Tropical PeatlandMNAVKVEPLRQVISAEQIQKRVKELGRQISDDYEGQTVQLLAVL
Ga0187868_101351943300018002PeatlandMNATRVEPLRQVIAAEQIQKRVKELGRHISDDYKGQTIQALAVLENAFM
Ga0187884_1039285513300018009PeatlandMNGPRVEPLRPVITSEQIQKRVKELGRQISDDYKGQTVQMLA
Ga0187857_1007815913300018026PeatlandMNAARVEPLRQVIAAAQIQKRVKELGRHISDDYKGQTI
Ga0187863_1048299823300018034PeatlandMNAARVEPIRQVITADQIQKRVKELARHISDDYQG
Ga0187871_1014643033300018042PeatlandMNGLRADSLRQVIASEQIQKRVKELGRHISDDYKGQTIQAL
Ga0187887_1016544323300018043PeatlandMNGPRVEPLRPVITTDQIQKRVKELARQISDDYKGQ
Ga0187784_1050479923300018062Tropical PeatlandMDDPRTEPLRQVISAEQIQKRVKELARHISDDYRG
Ga0187772_1027217013300018085Tropical PeatlandMNAVKVEPLRQVISAEQIQKRVKELGRQISDDYEGQT
Ga0187772_1088832723300018085Tropical PeatlandMNGSSVGSLRPVITTEQIQKRVRELGRQISDDYKGKTIQMLAVLEN
Ga0187769_1021941813300018086Tropical PeatlandMGWEGGQTSMNGARVQPLRQVITTEQLQKRVKELGRQISDDYAEQAEGQAVQVLAVLENAFMFL
Ga0187771_1124644313300018088Tropical PeatlandMGWEGGQTSMNGARVQPLRQVITTEQLQKRVKELGRQISDDYAEQAEGQAVQVLAVLENA
Ga0187770_1048490623300018090Tropical PeatlandMNGRRVEALRQVITTEQIQKRVKELGRQISDDYKEQIVGDEAIQVLAVLENAF
Ga0187852_143232313300019082PeatlandMSAARVEPLRQVIAAEQIQKRVKELGRHISDDYKGQTIQAL
Ga0182025_120626813300019786PermafrostMNGLKAESLRQVIAAEQIQKRVKELGRHISDDYRGQTIQALAVLENAFM
Ga0210403_1030039113300020580SoilMNAANSSLRQVIAAEQIQKRVKELGRHISDDYQGQTVQA
Ga0210399_1003914913300020581SoilMNATRVEPPRQVISAEQIQKRVKELARQISDDYKG
Ga0210404_1044237523300021088SoilMDVPRVEPLRPVITTDQIQKRVKELARQISDDYKGQ
Ga0210396_1009337943300021180SoilMNAFKVAPLRPVIAAEQIQKRVKELARHISDDYQGQTIQALAVLENAFMF
Ga0210388_1154650523300021181SoilMNASKVAPLRQVIAAEQIQKRVKELARHISDDYQGQTVQALAVL
Ga0210393_1042678113300021401SoilMNASKAAPLRQVIGAEQIQKRVKELARHISDDYQGQTI
Ga0210393_1107290323300021401SoilMSAARVEPLRPVITTEQIQKRVKELGRQISDDYQGQTI
Ga0210397_1011215513300021403SoilMNSSRVESMRQVISAEQIQKRIKELARQISDDYQGH
Ga0210397_1091264113300021403SoilMNATRVEPPRQVISAEQIQKRVKELARQISDDYKGQTIQ
Ga0210389_1152985423300021404SoilMSGSRVEALRQVISAEQIQKRIKELARQISDDYKGQTIQAL
Ga0210387_1019778313300021405SoilMSAARVEPLRQVISSEQIQKRVKELGRQISDDYDGQTVQVLAVL
Ga0210387_1169144713300021405SoilMNAPTMEPLRQVIAAEQIQKRVKELARHISDDYQGQTIQALA
Ga0210383_1082332413300021407SoilMNGSRVEPLRQVITTEQIQKRVKELGRQISDDYKGQTI
Ga0210394_1169913613300021420SoilMNAFKVAPLRPVIAAEQIQKRVKELARHISDDYQGQTIQALAVLEN
Ga0210390_1119622013300021474SoilMNATRAEPPRQVISAEQIQKRVKELARQISDDYKGQ
Ga0210398_1120807413300021477SoilMSATAETLRQVISAEHIQKRVKELARHISDDYQGQTIQALA
Ga0210410_1031782223300021479SoilMNAARVEPLRQVIPTEQIQKRVKELGRQISDDYKGQTVQALAVL
Ga0210410_1110568113300021479SoilMSAARVEPLRPVITTEQIQKRVKELGRQISDDYQGQTIQMLA
Ga0126371_1131323323300021560Tropical Forest SoilMNSRVEPLRQVITAEQIQKRVKELARQISDDYRGRSI
Ga0242663_104213213300022523SoilMNGPRVEPLRPVISTDQIQKRVKELARQISDDYKGQTIQMLAVLENAFM
Ga0242656_108521823300022525SoilMNATRVEPPRQVISAEQIQKRVKELARQISDDYKGQTIQILAVLENA
Ga0224565_101881423300024176Plant LitterLMNAWEVAPLRQVIAAEQIQKRVKELARHISDDYQGQTI
Ga0208193_104906723300025463PeatlandMNTAKVESLRQVIAAEQIRKRVKELGRQISDDYQGQTIQALA
Ga0207700_1150797313300025928Corn, Switchgrass And Miscanthus RhizosphereMSARVEPLRPIITTEQLQKRVKELGRQISDDYKGQTIQMLA
Ga0207664_1070286923300025929Agricultural SoilMTSSKAGAGRVVISSEQIQKRVKELARQISDDYRG
Ga0209849_108757113300026215SoilMNGPRVEPLRPVITTEQIQKRIKELGRQISDDYRG
Ga0208725_106560013300027158Forest SoilMNASKVAPLRQVIAAEQIQKRVKELARHISDDYQGQTVQAL
Ga0209004_106672513300027376Forest SoilMSSPKIEPLRPVITTEQIQKRVKELARQISDDYRGETIQMLAV
Ga0209116_112098413300027590Forest SoilMNGSRVEPLRLVITTEQIQKRVKELGRQISDDYKGQTIQM
Ga0209580_1066744213300027842Surface SoilMTARVEPLRQVISSDQIQKRVKELGRQISDDYKGQTI
Ga0209167_1017950123300027867Surface SoilMSSPKIQPLRPVITTEQIQKRVKELARQISDDYRGETI
Ga0209167_1070246123300027867Surface SoilMNGSKSGALRQVITAEQIQKRIKELGRQISDDYKGRT
Ga0209275_1007712913300027884SoilMNAFKVAPLRPVIAAEQIQKRVKELARHISDDYQGQTI
Ga0209275_1027403023300027884SoilMNASKAAPLRQVIGAEQIQKRVKELARHISDDYQGQ
Ga0209698_1059705713300027911WatershedsMNGSRSEPLRQVITSEQIQKRVKELARQISDDYKGQTVQM
Ga0302301_110707523300028731PalsaMNAPRVEPLRQVIAAEQIQKRVKELARHISDDYQGQTIQA
Ga0302218_1023344513300028863PalsaMNELKMNEPKVEVLRQVIAAEQIQKRVKELARQISDDYRGQTVQALAVL
Ga0302154_1056218313300028882BogMNDLKMNELKMNEPKVEVLRQVIGAEQVQKRVKELARQISDDYRGQTIQALAVL
Ga0311339_1036325713300029999PalsaMNELNAEPLRQVIAAEQIQKRVKELGRHISDDYRG
Ga0302178_1036453213300030013PalsaMMTLKTESLRQVIAAEQIQKRVKELARQISDDYQGQTI
Ga0302181_1048992913300030056PalsaMNGSKSGGALRQVITSEQIQKRVKELGRQISDDYKGQTIQAL
Ga0302179_1024625913300030058PalsaMNELNAEPLRQVIAAEQIQKRVKELGRHISDDYRGQTIQALA
Ga0310037_1024799713300030494Peatlands SoilMSAARVEPLRPVITSEQIQKRVKELGRQISDDYKVQATTGEPIQALAVLENGFMFLA
Ga0311370_1242398213300030503PalsaMSGPKTESLRQVIGSEQIQKRVKELARHISDDYRGQTVQALAVLENA
Ga0311372_1083323313300030520PalsaMNGPREEPLRTVITTEQIQKRVKELGRQISDDYKGQTIQM
Ga0311356_1056745623300030617PalsaMMTLKTESLRQVIAAEQIQKRVKELARQISDDYQGQTIQ
Ga0310038_1005020833300030707Peatlands SoilMNGSRVEPLRPVITTDQIQKRVKELARQISDDYKGETVQMLAVLE
Ga0265740_102739723300030940SoilMNGSKSGETLRQVITSEQIQKRVKELGRQISDDYKGQT
Ga0302325_1088659713300031234PalsaMNAPTVNEPRAEPLRQVIAAEQIQKRVKELARHISNDYQGRTVQALAVLE
Ga0302325_1182813223300031234PalsaMNGPITSSRAEPPRQVISAEQIHKRVKELARQISDD
Ga0170820_1355247323300031446Forest SoilMNALNRVSPRVEPLRPVITADQIQKRVKELARQISDDYRGQTIQ
Ga0302326_1017310113300031525PalsaMDSSNADSSRSEQPRQVISSEQIQKRVKELGRQISDDYQGRTIQALAVLE
Ga0302326_1250055223300031525PalsaMNGPRVETLRQVIPAEQIQKRVKELARHISDDYQGQTIQA
Ga0307508_1078246923300031616EctomycorrhizaMNGSRVEALRPVITTDQIQKRVKELGRQISDDYKGETIQMLAVLE
Ga0310686_10530523113300031708SoilMNTLKVESLRQVIAAEQIQKRVKELARHISDDYEGETIQALAVLE
Ga0310686_10827227013300031708SoilMNVSKAAPLRQVIGAEQIQKRVKELARHISDDYQGQTIQALAVLENA
Ga0310686_11970010313300031708SoilMNSLKVESLRQVIAAEQIQKRVKELARHISDDYEGETIQALAVLE
Ga0307476_1024817813300031715Hardwood Forest SoilMNVPKAEPLRQVIASEQIQRRVKELGRHISDDYRGQTIQALAVLENA
Ga0307474_1004938513300031718Hardwood Forest SoilMNVLKAEPLRQVIASEQIQRRVKELGRHISDDYRGQTIQALA
Ga0307477_1019512413300031753Hardwood Forest SoilMNATRVESPRQVISAEQIQKRVKELARQISDDYKGQTI
Ga0307477_1078087023300031753Hardwood Forest SoilMNGPRVEPLRQVIAAEQIQKRVKELARHISNDYQG
Ga0307478_1096918713300031823Hardwood Forest SoilMNLRVEPLRQVISSEQIQKRVKELGRQISDDYKGQTVQMLAVL
Ga0307478_1127801423300031823Hardwood Forest SoilMNASKAAPLRQVIGAEQIQKRVKGLARHISDDYQGQ
Ga0307478_1138598323300031823Hardwood Forest SoilMNGLKAESLRQVIASEQIQKRVKELGRHISDDYQGQTIQALAV
Ga0306926_1033992313300031954SoilMSGSRVEPLRQVISAEQIQKRVKELARQISDDYRGQT
Ga0311301_1093107413300032160Peatlands SoilMNSPRVEPLRPVITSEQIQKRVKELGRQISDDYKGQTTGGQAIQVLAVL
Ga0307471_10059212113300032180Hardwood Forest SoilMNATRVEPPRQVISAEQIQKRVKELARQISDDYKGQTIQMLAVLE
Ga0306920_10010302613300032261SoilMSAAKSENLRPVITTEQIQKRVKELARQISDDYRGQTIQILAVLENA
Ga0335079_1025392523300032783SoilMTGSQTEALRQVISAEQIQKRVKELGRQISDDYKGQ
Ga0335080_1028771413300032828SoilMNGPRVEPLRPVITTEQIQKRIRELGRQISDDYKGQTIQML
Ga0335081_1041349713300032892SoilMNSRAEPLRQVITAEQIQKRVKELARQISDDYRGRP
Ga0335069_1047613423300032893SoilMNASRVEPLRNVITAEQIQKRVKELGRQISDDYKGQTVQ
Ga0335074_1067166123300032895SoilMNTARVETLRPVIGSEQIQKRVKELGRQISDDYKG
Ga0335076_1131627413300032955SoilMTGSQTEALRQVISAEQIQKRVKELGRQISDDYKGQTVQMLAVLENA
Ga0310811_1038585913300033475SoilMSARVEPLRPIITTEQLQKRVKELGRQISDDYKGQTIQMLAVLEN
Ga0370515_0222004_2_1543300034163Untreated Peat SoilMNEMNEPIAKPLRQVIAAEQIQKRVKELGRHISDDYRGQTIQALAVLENGF
Ga0370515_0361677_465_6113300034163Untreated Peat SoilMNASRAESLRQVIAADQIQKRVKELARHISDDYQGQTIQALAVLENAFM

 ⦗Top⦘


Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.