Metagenome / Metatranscriptome Family F052126

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F052126
Family Type	Metagenome / Metatranscriptome
Number of Sequences	143
Average Sequence Length	102 residues
Representative Sequence	MCAVLVVVANILREPAFQVAFVNCDDVIQEITPATPYPTLCDSILPRTFERSAERIHPQGSNRCGDLQSILGITIKDDEPRSGSKWKCFSQLLHDP
Number of Associated Samples	115
Number of Associated Scaffolds	143

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	41.84 %
% of genes near scaffold ends (potentially truncated)	69.23 %
% of genes from short scaffolds (< 2000 bps)	84.62 %
Associated GOLD sequencing projects	105
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.28

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (81.818 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (46.154 % of family members)
Environment Ontology (ENVO)	Unclassified (48.951 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (60.839 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 3.23% β-sheet: 20.16% Coil/Unstructured: 76.61%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.28
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.28
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 143 Family Scaffolds
PF08281	Sigma70_r4_2	2.10
PF01381	HTH_3	1.40
PF12704	MacB_PCD	1.40
PF13426	PAS_9	0.70
PF02775	TPP_enzyme_C	0.70
PF00903	Glyoxalase	0.70
PF01966	HD	0.70
PF02311	AraC_binding	0.70
PF13360	PQQ_2	0.70
PF08388	GIIM	0.70
PF07748	Glyco_hydro_38C	0.70
PF02661	Fic	0.70
PF04224	DUF417	0.70
PF11453	DUF2950	0.70
PF01638	HxlR	0.70
PF01258	zf-dskA_traR	0.70
PF02321	OEP	0.70
PF05552	TM_helix	0.70
PF02687	FtsX	0.70
PF08241	Methyltransf_11	0.70
PF02706	Wzz	0.70
PF12844	HTH_19	0.70
PF04545	Sigma70_r4	0.70
PF13407	Peripla_BP_4	0.70

COG ID	Name	Functional Category	% Frequency in 143 Family Scaffolds
COG1538	Outer membrane protein TolC	Cell wall/membrane/envelope biogenesis [M]	1.40
COG0383	Alpha-mannosidase	Carbohydrate transport and metabolism [G]	0.70
COG0668	Small-conductance mechanosensitive channel	Cell wall/membrane/envelope biogenesis [M]	0.70
COG1733	DNA-binding transcriptional regulator, HxlR family	Transcription [K]	0.70
COG1734	RNA polymerase-binding transcription factor DksA	Transcription [K]	0.70
COG3059	Reactive chlorine resistance protein RclC/YkgB, DUF417 family	Defense mechanisms [V]	0.70
COG3206	Exopolysaccharide export protein/domain GumC/Wzc1	Cell wall/membrane/envelope biogenesis [M]	0.70
COG3264	Small-conductance mechanosensitive channel MscK	Cell wall/membrane/envelope biogenesis [M]	0.70
COG3524	Capsule polysaccharide export protein KpsE/RkpR	Cell wall/membrane/envelope biogenesis [M]	0.70
COG3765	LPS O-antigen chain length determinant protein, WzzB/FepE family	Cell wall/membrane/envelope biogenesis [M]	0.70
COG3944	Capsular polysaccharide biosynthesis protein YveK	Cell wall/membrane/envelope biogenesis [M]	0.70

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	82.52 %
Unclassified	root	N/A	17.48 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	82.52 %
Unclassified	root	N/A	17.48 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	81.82 %
Unclassified	root	N/A	17.48 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.70 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	48.95 %
Unclassified	root	N/A	17.48 %
TACK group	clade	All Organisms → cellular organisms → Archaea → TACK group	0.70 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	23.78 %
Unclassified	root	N/A	17.48 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	16.78 %
Candidatus Bathyarchaeota	phylum	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota	0.70 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	23.78 %
Unclassified	root	N/A	17.48 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	16.08 %
unclassified Candidatus Bathyarchaeota	no rank	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota	0.70 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	23.78 %
Unclassified	root	N/A	17.48 %
unclassified Terriglobales	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales	14.69 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1.40 %
Candidatus Bathyarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	0.70 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	23.78 %
Unclassified	root	N/A	17.48 %
Terriglobales bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium	14.69 %
unclassified Acidobacteriaceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae	0.70 %
Candidatus Bathyarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	0.70 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	23.78 %
Unclassified	root	N/A	17.48 %
Terriglobales bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium	14.69 %
Acidobacteriaceae bacterium URHE0068	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium URHE0068	0.70 %
Candidatus Bathyarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	0.70 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002906\|JGI25614J43888_10007520	All Organisms → cellular organisms → Bacteria	3524	Open in IMG/M
3300002914\|JGI25617J43924_10200157	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	664	Open in IMG/M
3300002917\|JGI25616J43925_10391056	All Organisms → cellular organisms → Bacteria	512	Open in IMG/M
3300004082\|Ga0062384_100557984	All Organisms → cellular organisms → Bacteria	769	Open in IMG/M
3300004114\|Ga0062593_101067765	All Organisms → cellular organisms → Bacteria	835	Open in IMG/M
3300004156\|Ga0062589_102010929	Not Available	586	Open in IMG/M
3300004157\|Ga0062590_102808190	Not Available	520	Open in IMG/M
3300005457\|Ga0070662_100271834	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1368	Open in IMG/M
3300005467\|Ga0070706_101789664	All Organisms → cellular organisms → Bacteria → Acidobacteria	558	Open in IMG/M
3300005468\|Ga0070707_100015299	All Organisms → cellular organisms → Bacteria	7199	Open in IMG/M
3300005536\|Ga0070697_100027559	All Organisms → cellular organisms → Bacteria	4546	Open in IMG/M
3300005548\|Ga0070665_102626499	Not Available	504	Open in IMG/M
3300006173\|Ga0070716_101216896	All Organisms → cellular organisms → Bacteria	605	Open in IMG/M
3300006175\|Ga0070712_100053632	All Organisms → cellular organisms → Bacteria	2816	Open in IMG/M
3300006237\|Ga0097621_101135183	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium	735	Open in IMG/M
3300006854\|Ga0075425_100014804	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium URHE0068	8418	Open in IMG/M
3300006871\|Ga0075434_100650400	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium	1072	Open in IMG/M
3300007255\|Ga0099791_10570854	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	552	Open in IMG/M
3300007265\|Ga0099794_10243014	Not Available	928	Open in IMG/M
3300007265\|Ga0099794_10367880	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	749	Open in IMG/M
3300007265\|Ga0099794_10524960	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	624	Open in IMG/M
3300009029\|Ga0066793_10199641	All Organisms → cellular organisms → Bacteria	1164	Open in IMG/M
3300009038\|Ga0099829_10135340	All Organisms → cellular organisms → Bacteria	1954	Open in IMG/M
3300009088\|Ga0099830_11059631	Not Available	672	Open in IMG/M
3300009088\|Ga0099830_11449152	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	571	Open in IMG/M
3300009089\|Ga0099828_10538303	All Organisms → cellular organisms → Bacteria	1053	Open in IMG/M
3300009089\|Ga0099828_11649177	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	564	Open in IMG/M
3300009137\|Ga0066709_102655566	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium	669	Open in IMG/M
3300009137\|Ga0066709_104172581	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium	526	Open in IMG/M
3300009162\|Ga0075423_12788082	Not Available	535	Open in IMG/M
3300009174\|Ga0105241_11081497	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium	754	Open in IMG/M
3300009520\|Ga0116214_1050655	All Organisms → cellular organisms → Bacteria	1505	Open in IMG/M
3300009545\|Ga0105237_10930205	All Organisms → cellular organisms → Bacteria	876	Open in IMG/M
3300009700\|Ga0116217_10971168	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	520	Open in IMG/M
3300010333\|Ga0134080_10469330	Not Available	593	Open in IMG/M
3300010335\|Ga0134063_10435207	Not Available	648	Open in IMG/M
3300010364\|Ga0134066_10443626	Not Available	506	Open in IMG/M
3300011269\|Ga0137392_10067888	All Organisms → cellular organisms → Bacteria	2735	Open in IMG/M
3300011269\|Ga0137392_10373838	All Organisms → cellular organisms → Bacteria	1182	Open in IMG/M
3300011269\|Ga0137392_11521522	Not Available	528	Open in IMG/M
3300011270\|Ga0137391_10004989	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	10181	Open in IMG/M
3300011270\|Ga0137391_10587988	All Organisms → cellular organisms → Bacteria	934	Open in IMG/M
3300011270\|Ga0137391_11182600	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	612	Open in IMG/M
3300011271\|Ga0137393_10773364	All Organisms → cellular organisms → Bacteria	821	Open in IMG/M
3300011271\|Ga0137393_11157633	All Organisms → cellular organisms → Bacteria → Acidobacteria	657	Open in IMG/M
3300011271\|Ga0137393_11406814	Not Available	587	Open in IMG/M
3300012096\|Ga0137389_10106245	All Organisms → cellular organisms → Bacteria → Acidobacteria	2239	Open in IMG/M
3300012189\|Ga0137388_10651642	All Organisms → cellular organisms → Bacteria	978	Open in IMG/M
3300012189\|Ga0137388_10868341	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	835	Open in IMG/M
3300012199\|Ga0137383_10991791	All Organisms → cellular organisms → Bacteria	612	Open in IMG/M
3300012202\|Ga0137363_10851967	Not Available	774	Open in IMG/M
3300012202\|Ga0137363_11723751	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	519	Open in IMG/M
3300012205\|Ga0137362_10794067	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	811	Open in IMG/M
3300012209\|Ga0137379_11676720	All Organisms → cellular organisms → Bacteria	533	Open in IMG/M
3300012210\|Ga0137378_10422042	All Organisms → cellular organisms → Bacteria	1237	Open in IMG/M
3300012211\|Ga0137377_10306458	All Organisms → cellular organisms → Bacteria	1523	Open in IMG/M
3300012354\|Ga0137366_10468340	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium	912	Open in IMG/M
3300012362\|Ga0137361_11744487	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	541	Open in IMG/M
3300012363\|Ga0137390_10558168	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1115	Open in IMG/M
3300012363\|Ga0137390_10868692	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	858	Open in IMG/M
3300012513\|Ga0157326_1049854	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium	612	Open in IMG/M
3300012582\|Ga0137358_10948745	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium	560	Open in IMG/M
3300012683\|Ga0137398_10087842	All Organisms → cellular organisms → Bacteria → Acidobacteria	1931	Open in IMG/M
3300012683\|Ga0137398_10254143	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1171	Open in IMG/M
3300012683\|Ga0137398_10500229	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	835	Open in IMG/M
3300012685\|Ga0137397_10562689	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium	849	Open in IMG/M
3300012882\|Ga0157304_1029838	All Organisms → cellular organisms → Bacteria	746	Open in IMG/M
3300012917\|Ga0137395_10279848	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	1178	Open in IMG/M
3300012917\|Ga0137395_11148806	Not Available	547	Open in IMG/M
3300012918\|Ga0137396_10184100	All Organisms → cellular organisms → Bacteria	1532	Open in IMG/M
3300012918\|Ga0137396_11056156	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium	584	Open in IMG/M
3300012922\|Ga0137394_11522613	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium	527	Open in IMG/M
3300012923\|Ga0137359_11239276	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium	634	Open in IMG/M
3300012924\|Ga0137413_10276664	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium	1163	Open in IMG/M
3300012927\|Ga0137416_10439922	All Organisms → cellular organisms → Bacteria	1112	Open in IMG/M
3300012929\|Ga0137404_11012583	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium	760	Open in IMG/M
3300012929\|Ga0137404_12162542	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	520	Open in IMG/M
3300012930\|Ga0137407_10652602	All Organisms → cellular organisms → Bacteria	989	Open in IMG/M
3300012930\|Ga0137407_11403138	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	664	Open in IMG/M
3300012955\|Ga0164298_11499097	All Organisms → cellular organisms → Bacteria	526	Open in IMG/M
3300012958\|Ga0164299_10484100	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	819	Open in IMG/M
3300012960\|Ga0164301_10776345	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium	730	Open in IMG/M
3300012961\|Ga0164302_10114130	All Organisms → cellular organisms → Bacteria → Acidobacteria	1522	Open in IMG/M
3300012984\|Ga0164309_10179450	All Organisms → cellular organisms → Bacteria	1438	Open in IMG/M
3300012986\|Ga0164304_10371959	All Organisms → cellular organisms → Bacteria	1006	Open in IMG/M
3300012989\|Ga0164305_10354002	All Organisms → cellular organisms → Bacteria	1107	Open in IMG/M
3300014325\|Ga0163163_10531636	All Organisms → cellular organisms → Bacteria → Acidobacteria	1238	Open in IMG/M
3300014495\|Ga0182015_10524143	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	756	Open in IMG/M
3300014501\|Ga0182024_12165794	All Organisms → cellular organisms → Bacteria	609	Open in IMG/M
3300014969\|Ga0157376_10463105	All Organisms → cellular organisms → Bacteria	1239	Open in IMG/M
3300015052\|Ga0137411_1003586	Not Available	532	Open in IMG/M
3300015054\|Ga0137420_1210871	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2331	Open in IMG/M
3300015054\|Ga0137420_1487677	All Organisms → cellular organisms → Bacteria	4303	Open in IMG/M
3300015241\|Ga0137418_10028212	All Organisms → cellular organisms → Bacteria	5194	Open in IMG/M
3300015358\|Ga0134089_10452134	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium	556	Open in IMG/M
3300015359\|Ga0134085_10573297	Not Available	522	Open in IMG/M
3300015374\|Ga0132255_100655746	All Organisms → cellular organisms → Bacteria → Acidobacteria	1556	Open in IMG/M
3300018482\|Ga0066669_12060910	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	537	Open in IMG/M
3300019789\|Ga0137408_1355767	All Organisms → cellular organisms → Bacteria	2568	Open in IMG/M
3300019887\|Ga0193729_1004020	All Organisms → cellular organisms → Bacteria → Acidobacteria	7160	Open in IMG/M
3300020062\|Ga0193724_1025092	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1270	Open in IMG/M
3300020199\|Ga0179592_10023714	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2743	Open in IMG/M
3300020199\|Ga0179592_10286684	Not Available	733	Open in IMG/M
3300020580\|Ga0210403_10001170	All Organisms → cellular organisms → Bacteria	25457	Open in IMG/M
3300021086\|Ga0179596_10024831	All Organisms → cellular organisms → Bacteria → Acidobacteria	2230	Open in IMG/M
3300021170\|Ga0210400_10795145	All Organisms → cellular organisms → Bacteria	775	Open in IMG/M
3300021180\|Ga0210396_11198681	All Organisms → cellular organisms → Bacteria	635	Open in IMG/M
3300021478\|Ga0210402_10652680	All Organisms → cellular organisms → Bacteria	974	Open in IMG/M
3300022717\|Ga0242661_1047888	All Organisms → cellular organisms → Bacteria	790	Open in IMG/M
3300024222\|Ga0247691_1022334	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	988	Open in IMG/M
3300024283\|Ga0247670_1047204	All Organisms → cellular organisms → Bacteria	777	Open in IMG/M
3300024330\|Ga0137417_1012488	All Organisms → cellular organisms → Bacteria → Acidobacteria	948	Open in IMG/M
3300024330\|Ga0137417_1225095	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	558	Open in IMG/M
3300025898\|Ga0207692_11083845	All Organisms → cellular organisms → Bacteria	530	Open in IMG/M
3300025910\|Ga0207684_10137314	All Organisms → cellular organisms → Bacteria	2100	Open in IMG/M
3300025922\|Ga0207646_10005182	All Organisms → cellular organisms → Bacteria	13782	Open in IMG/M
3300026035\|Ga0207703_11252572	Not Available	713	Open in IMG/M
3300026320\|Ga0209131_1134262	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1271	Open in IMG/M
3300026351\|Ga0257170_1023608	All Organisms → cellular organisms → Bacteria	814	Open in IMG/M
3300026354\|Ga0257180_1069572	All Organisms → cellular organisms → Bacteria	513	Open in IMG/M
3300026551\|Ga0209648_10270334	All Organisms → cellular organisms → Bacteria → Acidobacteria	1243	Open in IMG/M
3300026551\|Ga0209648_10579126	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	621	Open in IMG/M
3300026557\|Ga0179587_10444751	All Organisms → cellular organisms → Bacteria → Acidobacteria	847	Open in IMG/M
3300026557\|Ga0179587_10598703	Not Available	725	Open in IMG/M
3300027587\|Ga0209220_1187140	Not Available	528	Open in IMG/M
3300027629\|Ga0209422_1110156	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	633	Open in IMG/M
3300027643\|Ga0209076_1128070	Not Available	715	Open in IMG/M
3300027645\|Ga0209117_1113151	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	731	Open in IMG/M
3300027663\|Ga0208990_1193641	Not Available	519	Open in IMG/M
3300027671\|Ga0209588_1004323	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3999	Open in IMG/M
3300027671\|Ga0209588_1220809	Not Available	586	Open in IMG/M
3300027846\|Ga0209180_10299738	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	921	Open in IMG/M
3300027846\|Ga0209180_10747089	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium	528	Open in IMG/M
3300028146\|Ga0247682_1055934	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	714	Open in IMG/M
3300031057\|Ga0170834_104271476	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium	547	Open in IMG/M
3300031128\|Ga0170823_10673006	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium	530	Open in IMG/M
3300031446\|Ga0170820_15484233	Not Available	524	Open in IMG/M
3300031469\|Ga0170819_15331225	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	651	Open in IMG/M
3300031715\|Ga0307476_10458651	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium	943	Open in IMG/M
3300031792\|Ga0318529_10370395	All Organisms → cellular organisms → Bacteria	667	Open in IMG/M
3300031962\|Ga0307479_10184575	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium	2052	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	90.91%
Host-Associated	Host-Associated	9.09%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	90.21%
Plants	Host-Associated → Plants	9.09%
Aquatic	Environmental → Aquatic	0.70%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	90.21%
Rhizosphere	Host-Associated → Plants → Rhizosphere	5.59%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.10%
Roots	Host-Associated → Plants → Roots	1.40%
Freshwater	Environmental → Aquatic → Freshwater	0.70%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	79.02%
Loam	Environmental → Terrestrial → Soil → Loam	8.39%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	4.20%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.80%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.40%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	1.40%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.40%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.70%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.70%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	58.74%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	11.89%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	6.29%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.59%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	4.20%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	2.80%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.80%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.10%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.40%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	1.40%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.40%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	0.70%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.70%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	46.15%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	7.69%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	7.69%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	6.29%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.59%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	3.50%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	2.80%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.10%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.10%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	1.40%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.40%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	1.40%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.40%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.70%
Prmafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil	0.70%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	0.70%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.70%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.70%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	0.70%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.70%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.70%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.70%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.70%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.70%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002906	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_60cm	Environmental	Open in IMG/M
3300002914	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm	Environmental	Open in IMG/M
3300002917	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_100cm	Environmental	Open in IMG/M
3300004082	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300009029	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 1 DNA2013-189	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009520	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_1_NS metaG	Environmental	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300009700	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG	Environmental	Open in IMG/M
3300010333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015	Environmental	Open in IMG/M
3300010364	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09212015	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012513	Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.2.old.250510	Host-Associated	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012882	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014495	Permafrost microbial communities from Stordalen Mire, Sweden - 712P3M metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015052	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015054	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015358	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015359	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09182015	Environmental	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019789	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300019887	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c2	Environmental	Open in IMG/M
3300020062	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2a1	Environmental	Open in IMG/M
3300020199	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300021086	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300022717	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-11-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300024222	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK32	Environmental	Open in IMG/M
3300024283	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK11	Environmental	Open in IMG/M
3300024330	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cm (SPAdes)	Environmental	Open in IMG/M
3300026351	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-05-B	Environmental	Open in IMG/M
3300026354	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-04-B	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027587	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M3 (SPAdes)	Environmental	Open in IMG/M
3300027629	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M3 (SPAdes)	Environmental	Open in IMG/M
3300027643	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3 (SPAdes)	Environmental	Open in IMG/M
3300027645	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2 (SPAdes)	Environmental	Open in IMG/M
3300027663	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA Ref_M3 (SPAdes)	Environmental	Open in IMG/M
3300027671	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300028146	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK23	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031128	Oak Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031469	Fir Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031792	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f23	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300033475	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YC	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI25614J43888_100075209	3300002906	Grasslands Soil	VAFVNCDDVIQEITAATPYPTLCDSILPRTFERGADRIHAQEPNRCGDFQSILGITIKDDEPRSGSKWKRFSQLLDDPQACRMLCDIEVQNAPTIVTDDEKAI
JGI25617J43924_102001571	3300002914	Grasslands Soil	MRAVLVVVANILREPAFQVAFVNCDDVIQEIMPATLYPTLCDSILPRTFERGADRIHPQGSNRCGDFQSILGITIKDDEPRSGS
JGI25616J43925_103910561	3300002917	Grasslands Soil	MRAVLVVIANILSEAAFQVAFVNCNDVIQEITAATPYPTLCDSILPRTLGRSADRTHAQGSNRCRDFQSVLGITIKDDEPRSGSKWKRFSQLLDDPRACRMLC
Ga0062384_1005579842	3300004082	Bog Forest Soil	MGNNCNDAIQEITPATPYPTLCDSILQRTLERGADRTHAEGSNRCGDFQSILGITIKDDEPRSGSKWKCFSQLLDDPKAGRML
Ga0062593_1010677651	3300004114	Soil	RWFGLGSSIVPVVQPSQSRMRKDVTGGYGASSSIWRSLPESEMCAVLVVVANILREPAFQVAFVNCDDVIQEITPATPYPTLCDSILPRTFERSAERIHPQGSNRCQDLQSILGITIKDDEPRSGSKWKCFSQLLHDP*
Ga0062589_1020109291	3300004156	Soil	WFGLGGSIVPVVQPSQSRMRKDVTGGYDASSSVWRSLPESEMCAVLVVVANILREPAFQVAFINCDDVIQEITPATPYPTLCDSILPRTFERSAERIHPQGSNRCQDLQSILGITIKDDEPRSGSKWKCFSQLLHDP*
Ga0062590_1028081901	3300004157	Soil	VVQPSQSRMRKDVTGGYGASSSVWRSLLESEMCAVFVVVANILREPAFQVAFVNCDDVIQEITPATPYPTLCDSILPRTFERSAERIHPQGSNRCQDLQSILGITIKDDEPRSGSKWKCFSQLLHDP*
Ga0070662_1002718341	3300005457	Corn Rhizosphere	MRRWFALGSPIVPVVQSSQSRMRKDVTGGYGASSSVWRSLPESEMCAVLVVVANILTEPSFQVAFVNCDDVIQEITPATPYPTLCDSILPRTFERSAKRIHPQGSNRCGDLQSILGITIKDDKPRSGPKWKCFSQLLHDP*
Ga0070706_1017896642	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	VIQEITPATPYPTLCDSILPRTFERSAERIHPQGSNRCGDLQSILAITIKDDEPRSGSKWKCFSQLLHDP*
Ga0070707_1000152996	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	NILREPAFQVAFVNCDDVIQEITPATPYPTLCDSILPRTFERSAERIHPQGSNRCGGLQSILSITIKDDEPRSGSKWKCFSQLLYDP*
Ga0070697_1000275597	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	AFVNCDDVIQEITPATPYPTLCDSILPRTFERSADRIHPQGSNRCGDLQSILGITIKDDEPRSGSKWKCFSQLLHDP*
Ga0070665_1026264991	3300005548	Switchgrass Rhizosphere	MRKDVTGGYGASSSVWRSLPESEMCAVLVVVANILTEPSFQVAFVNCDDVIQEITPATPYPTLCDSILPRTFERSAERILPQGSNRCGDLQTILAITIKDDEPGSESKWKCFSQLLHDP*
Ga0070716_1012168962	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	ILREPAFQVAFVNCDDVIQEITPATPYPTLCDSTLPRTFKRSAERIHPQGSNRCGDFQSILGITIKDDEPRSGSKWKCFSQLLHDP*
Ga0070712_1000536323	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MCAVLMVVAYILREPAFQVVLVNCDDVIQEITPATPYPTLCDSILPRTFERSAERIHPQGSNRCGNLQSILGIAIKDDEPRNGSKWKCFSQLLHDP*
Ga0097621_1011351831	3300006237	Miscanthus Rhizosphere	WFGLGSSIVPVVQPSQSRMRKDVTGGYGASSSIWRSLPESEMCAVLVVVANILREPAFQVAFVNCDDVIQEITPATPYPTLCDSILPRTFERSAERIHPQGSNRCGDLQSILGITIKDDEPRSGSKWKCFSQLLHDP*
Ga0075425_1000148049	3300006854	Populus Rhizosphere	VVVANILREAAFQVAFVNCDDVIQEITPATPYPTLCDSILPRTFERSADRIHPQGSNRCGDLQSILGITIKDDEPRSGSKWKCFSQLLHDP*
Ga0075434_1006504001	3300006871	Populus Rhizosphere	CAVLVVVANILREAAFQVAFVNCDDVIQEITPATPYPTLCDSILPRTFERSADRIHPQGSNRCGDLQSILGITIKDDEPRSGSKWKCFSQLLHDP*
Ga0099791_105708542	3300007255	Vadose Zone Soil	MCAVLVVVANILREPAFQVAFVNCDDVIQEITPATPYPTLCHSILPRTFERSADRIHPQGSNRCGDFQSILGITIKDDEP
Ga0099794_102430141	3300007265	Vadose Zone Soil	MRAVLVVVANILREQAFRVAFVNCDDVIQEITPATPYPTLCNSILPRTFERSADRIHHQGSNRCGDFQSILGITIKDDEPWSGFKWKCFSQLLDDPQACRMLCDIEVQ
Ga0099794_103678801	3300007265	Vadose Zone Soil	MRAVLMVVANILREPAFQVAFVNCNDVIQEIKPATPYPTLCDSILPRTFERGADRVHPQGSNRCGDFQSILGATIKDDEPRGGSKWKCFSQLLDDPQACRML
Ga0099794_105249601	3300007265	Vadose Zone Soil	MRAVFVVVANILREPAFQVAFINCNDVIQEITPATPYPTLCDSILPRTLERGADRIHPQGSNRCGDFQSVLGITIKDDE
Ga0066793_101996412	3300009029	Prmafrost Soil	MCAVLVVVANILREPAFQVAFVNCDDVIQEITPATPYATLCDSILPRTFERSAERIHPQGSNRCGDLPSILGITIKDDEPRSGCKWKCFSQLLHDP*
Ga0099829_101353402	3300009038	Vadose Zone Soil	MCAILVVVANILSEQAFQVAFVNCNDVIQEITPATPYPTLCHSILPRTSERSADRIHAQGSNRCRDFQSILAITIKDEEPPNGSKWKCFSQLLDDP*
Ga0099830_110596311	3300009088	Vadose Zone Soil	MCAVLGVVANILREQAFQVAFVNCDDVIQEITAATPYPTLCDSILPRTFERSADRIRHQGSNGCGDFQSILGITIKDDEPRSGSKWKCFSQLLDDPQACRMLC
Ga0099830_114491521	3300009088	Vadose Zone Soil	MRAVLVVVADILREETFEVAFVNCNDVIQEITAATPYPTLCDSILPRTFERGADRTHAQGSNRRGHFQSILGISIKDDELRSGSKWKCF
Ga0099828_105383033	3300009089	Vadose Zone Soil	MRAVLVVVANILREPAFQVAFVNCNDVIQEITPATPYPTLCNSILPRTFQRSAERIHPQGANRCGDLQSILGITIKDDEPRSGSKWKCFSQLLHDP*
Ga0099828_116491772	3300009089	Vadose Zone Soil	MRAVLVVVANILREETFQVTLVNRDDVIQEITAATPYPTLCDSILPRTLERGADRIHPQGSNRCGDFQSILGITIKDDEPRGGFKWKCFSQLLDDPQACRMLCDVEVQDAPTVVADDEK
Ga0066709_1026555662	3300009137	Grasslands Soil	WCSLPESEMCAVLVVVANILREPAFQVAFGNCNDVIQEITPATPYPTLCDSILPRTFERSAERIHPQGSNRYGDFQSILGITIKDDEPRSGSKWKCFSQLLHDP*
Ga0066709_1041725811	3300009137	Grasslands Soil	SEMCAVLVVVANILREPAFQVAFVNCDDVIQEITPATPYPTLCDSILPRTFERSADRIHPQGSNHCGDLQSILGITIKDDEPRGGSKWKCFSQLLHDP*
Ga0075423_127880821	3300009162	Populus Rhizosphere	MCAVLVVVANILREAAFQVAFVNCDDVIQEITPATPYPTLCDSILPRTFERSADRIHPQGSNRCGDLQSILGITIKDDEHRSGSKWKCFSQLLHDP*
Ga0105241_110814971	3300009174	Corn Rhizosphere	MVVANILREPSFQVAFVNCDDVIQEITPATPYPTLCDSILPRTFERSAERIHPQGSNRCGDLQSILGITIKDDEPRSGSKWKCFSQLLHDP*
Ga0116214_10506551	3300009520	Peatlands Soil	MRAVLVVVANILREQAFQVAFVNCNDVIQEITPATPYPTLCDSILPRTFQRSADRTHAEGSNRCRDFQSILGITIKDDEPRSRSKWKCFSQLLDDPQACRMLCDVEVQDAPTIVAD
Ga0105237_109302052	3300009545	Corn Rhizosphere	MCAVLVVVANILREPAFQAFVNCDDVIQEITPATPYPTLCDSILPRTFERSAKRIHPQGSNRCGDLQSILGINIKDDEPRSGSKWKCFSQLLHDP*
Ga0116217_109711681	3300009700	Peatlands Soil	MRAVLVVVANILREQAFQVAFVNCNDVIQEITPATPYPTLCDSILPRTLEQGADRTHAEGSNRCRDFQSILGITIKNEEP
Ga0134080_104693302	3300010333	Grasslands Soil	MRAILVVVANILGEQAFQVAFVNCDDVIKEITTATPYPTLCHSILPRTFERSADRIHPQGSNRCGDLQSILGITIKDHEPRSRSKWKCFSQLLHDP*
Ga0134063_104352071	3300010335	Grasslands Soil	MRAILVVVANILGEQAFQVAFVNCNDVIQEITPATPYPTLCHSILPRTFERSAARMHPQGSNRCRDLQSILGITIKDDEPRSGSKWKCFSQLLDDPRACRMLCDIEVQDAPTIVTDDEE
Ga0134066_104436261	3300010364	Grasslands Soil	MRKDVTGGYGASSSVWRSLPESEMCAVLVVVANILREPAFQVAFVNCDDVIQEITPATPYPTLCDSILPRTFERSAEKIHPPGSNRCGDLQSILGITIKDHEPWSGFKWKCFS*
Ga0137392_100678883	3300011269	Vadose Zone Soil	MRAVLVVVANILREPASQVAFVNCNDVIQEITAATPYPTLCDSILPRTFERSADRIYPQGSNRCGDFQSILGITIKDDEPRSRSKWKCFSQLLDDPQACRMLGDIECRIRRRS*
Ga0137392_103738381	3300011269	Vadose Zone Soil	MRAVLVVVANIPSEPAFQVAFVNCDDVIQEITATTPYPTLCNSILPRTFERGADRTHAQGSNRCGDFQSILGITIKDDEPW
Ga0137392_115215221	3300011269	Vadose Zone Soil	MRAVLVVVANILREQGFQVAFVNCDDVIQEITTATPYPTVCHSILPRTFERSADRTHAQGSNRCRDFQSILGITIKDEEPRSASKWKCFSQLLDDPRACRMLCDIEVQDATTIVTD
Ga0137391_100049891	3300011270	Vadose Zone Soil	MRAVLVVVANILREPAFQVAFVNCDDVIQEITPATPYPTLCDSILPRTLERGADRTHAERLNRCRDFQSILGITIKDDEPRSGSKWKCFSQLLDDPRA
Ga0137391_105879881	3300011270	Vadose Zone Soil	MCAVLVVVANILREPAFQVAFVLPRTFERSAERIHPQGSNRCRDLQSILGITIKDDEPRSGSKWKREIVRSETSKPSMQPVLFDSSIYITALRTGDEAALSLRR
Ga0137391_111826001	3300011270	Vadose Zone Soil	MRAVLVVVANIPSEPAFQVAFVNCDDVIQEITATTPYPTLCNSILPRTFERGADRTHAQGSNRCGDFQSILGITIKDDEPWSGFKWKCFSQ
Ga0137393_107733642	3300011271	Vadose Zone Soil	MRAVLVVIANILREPAFQVAFVNCNDVIQEIKPATPYPTLCDSILPRTFERGADRVHPQGSNRCGDFQFILGITIKDDEPRSGSKWKCFSQLLDDPRACRM
Ga0137393_111576331	3300011271	Vadose Zone Soil	GASSSVWRSLPQSEMRAVLVVVANILREPASQVAFVNCNDVIQEITAATPYPTLCDSILPRTFERSADRIYPQGSNRYGDFQSILGITIKDDEPRSRSKWKCFSQLLDDPQACRMLGDIECRIRRRS*
Ga0137393_114068141	3300011271	Vadose Zone Soil	MRAVLVVVANILREQGFQVAFVNCDDVIQEITTATPYPTVCHSILPRTFERSADRTHAQGSNRCRDFQSILGITIKDEEPRSASKWKCFSQLLDDPRACRMLCDIEVQDA
Ga0137389_101062452	3300012096	Vadose Zone Soil	MRAVLVVVANILREHAFQVAFVNCDDVIQEITAATPYPTLCDSILPRTLERGADRTHAQGSNRCGDFQSILGITIKDDEPRGGSKWKCFSQLLDDPRACRMLCDIEVQDTPTIVTDDEK
Ga0137388_106516422	3300012189	Vadose Zone Soil	AFVNCDDVIQEITPATPYPTLCDSILPRTFERSAERIHPQGANRCGDLQSILGITIKDDEPRSGSKWKCFSQLLHDP*
Ga0137388_108683411	3300012189	Vadose Zone Soil	VVVANILREETFQVAFVNCNDVIQEITTATPYPTLCHSILPRTFERGANRIQAQGSNRCRDFQSILGISIKDDEPRSG
Ga0137383_109917911	3300012199	Vadose Zone Soil	MCAVLVVVANILREPAFQVAFVNCDDVIQEITPATPYPTLCDSILPRTFERSAERIHPQGSNRCGDFQSILGITIKDDESRSRSKRKCFSQLLDDPRACR
Ga0137363_108519671	3300012202	Vadose Zone Soil	MRAVLVVVANILREQAFQVAFVNCDDVIQEITPATPYPTLCDSILPRTFERSADRIHPQGSNRCGDFQSILGITIKDDEPRSGSKWKCFSQLLDDPQACRMLG
Ga0137363_117237512	3300012202	Vadose Zone Soil	PYPTLCDSILPRTLERGADRTYAQGSNCCGDFQSILGIAIKDEEPWSGFKGKCFSQLLDDP*
Ga0137362_107940671	3300012205	Vadose Zone Soil	EITPATPYPTLCDSILPRTFERSAERIHPQGSNRCGDLQSILGITIKDDEPRSRSKWKCFSE*
Ga0137379_116767201	3300012209	Vadose Zone Soil	VAFVNCNDVIQEITPATPYPTLCDSILPRTFERSAERIHPQGSNRCGDLQSILGITIKDDEPRSGSKWKCFSQLLDDP
Ga0137378_104220422	3300012210	Vadose Zone Soil	VAFVNCNDVIQEITPATPYPTLCDSILPRTFERSAERIHPQGSNRCGDLQSILGITIKDDEPRSGSKWKCFSLLLDDP*
Ga0137377_103064581	3300012211	Vadose Zone Soil	MCAVLVVVANILREPAFQVAFVNCDDVIQEITPATPYLTLCDSILPRTFERSAERIHPKGSNRCGDLQSILGITIKDDEPRSGSKWKCFSQLLHDP*
Ga0137366_104683401	3300012354	Vadose Zone Soil	MRKDVTGGYGASSSVWRSLPESEMCAVLVVVANILREATFQVAFVNCDDVIQEITPATPYPTLCDSILPRTFERSAERIHPQGSNRCGDLQSILGITIKDDEPRGGSKWKCFSQLLDDP*
Ga0137361_117444871	3300012362	Vadose Zone Soil	MRAVLVVVANILREPAFQVAFVNCDDVIQEITTATPYPTLCHSILPRTFERSADRTHAQGSNRCRDFQSILGITIKDEEPRSASKWKCFSQLL
Ga0137390_105581681	3300012363	Vadose Zone Soil	MCAVLVVVANIFREPAFQVAFVNCDDVIKEITPATPYPTLCDSILPRTFERSAERIHPQGSNRCGDLQSILGITIKDDEPRSGSKWKCF
Ga0137390_108686923	3300012363	Vadose Zone Soil	MCAVLVVVANILSEQAFQVAFVNCNDVIQEITPATPYPTLCNSILPRTLERGADRTHAQGSNRCGDFQSVLGITIKDDEPRSGSKWKCFSQLLDDPQACRMLCDIEVQDAPTIVTD
Ga0157326_10498542	3300012513	Arabidopsis Rhizosphere	MRKDVTGGYGASSSVWRSLPESEMCAVLVVVANILREPAFQVAFVNRDDVIKEITPATPYPTLCDSILPRTFKRSAERIHPQGSNRCGDLQSILGITIKDDEPRSGSKWKCFSQLLHDP*
Ga0137358_109487452	3300012582	Vadose Zone Soil	MCAVLVVVANILREPAFQVAFVNCDDVIQEITPATPYPTLCDSILPRTFERSAERIHPQGSNRCGDLQSILGITIKDDEPRSGSKWKCFSQLLHDP*
Ga0137398_100878421	3300012683	Vadose Zone Soil	VLRHNSKRTENVIQEITPATPYPTLCNSILPRTFERGADRTHAEGSNRCGHFQSILGITIKDDEPWSGFKGKCFSQLLDDPQACRMLCDIEVQDAPTIV
Ga0137398_102541431	3300012683	Vadose Zone Soil	MCAVLVVVVNILRQPAFHVAFVNCDDVIQEITPATPYPTLCDSILPRTFERSAERIHPQGSNRCGDLQSILGITIKDDEP
Ga0137398_105002292	3300012683	Vadose Zone Soil	MRAVLVVVANILSEQAFQVAFVNCDDVIQEITAATPYPTLCDSILPRTFERGADRTHAQGSNRCGYFQSILGITIKDDEPRSGSKGKCFSQLLDDPR
Ga0137397_105626892	3300012685	Vadose Zone Soil	MRAILVVVANILGEQAFQVAFVNCNDVIQEITAATPYPPLCHSLLPRTFERSADRTHAQGPNRCRDFQSILGITIKDDEPRSGSKWK
Ga0157304_10298381	3300012882	Soil	MRKDVTGGYGASSSVWRSLPESEMCAVLVVVANILREPAFQVAFVNCDDVIQEITPATPYPTLCDSILPRTFERSAERIHPQGSNRCRDLQSILGITIKDDEPRSGSKWKCFSQLLHDP*
Ga0137395_102798482	3300012917	Vadose Zone Soil	MRAVLVVVANILREQAFQVAFVNCNDVIQEITPATSYPTLCDSILPRTLERGADRTHAQGSNCCGDSQSVLGITIKDEEPWSGFKGKCFSQLLDDP
Ga0137395_111488061	3300012917	Vadose Zone Soil	MRGVLVVVANILREPAFQVAFVNCDDVIQEITPATPYPTLCDSILPRTFERSAERIHPQGSNRCGDLQSILGITIKDDEPRSGSKWKCFSQLLDDP*
Ga0137396_101841001	3300012918	Vadose Zone Soil	MRAVLVVVANILREETFQVAFVNCNDVIQEITPATSYPTLCHSILPRTFERSADRTHPQGSNRCGHFQSILGITIKDDEPRCGSKWKCFSQLLDDPRACRMLCDIEVQDAPTIVT
Ga0137396_110561562	3300012918	Vadose Zone Soil	MRAVLVVVANILREETFQVAFVNCNDVIQEITPATPYPTLCDSILPRTLERGADRIHPQGSNRCRDFQSILGITIKNDEPRSGSKWKCFSQLLDDPQACRMLGD
Ga0137394_115226131	3300012922	Vadose Zone Soil	NILREPAFQVAFVNCDDVIQEITPATPYPTLCDSILPRTLERSADRIHPQGSNRCGDLQSILGITIKDDEPRSGSKWKCFSQLLHDP*
Ga0137359_112392761	3300012923	Vadose Zone Soil	MRAILVVVANILGEQAFQVAFVNCDDVIQEITAATPCPTLCDSILPRTFERSADRTHAQGSNGCWDFQSILGITIKDEEPRSGSKWKCFSQLLDDPRACRML
Ga0137413_102766642	3300012924	Vadose Zone Soil	MRAVLVVVENILREQAFQVAFVNCNDVIQEITPATPYPTLCDSILPRTLERSADWTHAQGSNPCGDFHSILGITIKDDEPRSGSKWKCFSQLLDDP*
Ga0137416_104399221	3300012927	Vadose Zone Soil	MRAVFVVVANILREEAFQVAFVNCDDVIQEITAATPYPTLCDSILPRTFERGADRIHAQEPNRCGDFQSILGITIKDDEPRSGSKWKRFSQLLDDPRACRM
Ga0137404_110125831	3300012929	Vadose Zone Soil	MCAVLVVVANILREPAFQVAFVNCDDVIQEITPATPYPTLCDSILPRSFERSAERIHPQGSNRCRDLQSILGITIKDDEPRSGSKWKCFSQLLHDP*
Ga0137404_121625421	3300012929	Vadose Zone Soil	MCAVLVVVANILREPAFQVAFVNCNDVIQEITAATPYPTLCDSILPRTFERSADRIYPQGSNCCGDFQSILGIAIKDEEPWSGFKGK
Ga0137407_106526021	3300012930	Vadose Zone Soil	VAFGNCNDVIQEIAAATPYPTLCNSILPRTFERSADRIYPQGSNRCGDFQSILGITIKDDEPRGGSKWKCFSQLLHDPRACRMLCDIEVQD
Ga0137407_114031381	3300012930	Vadose Zone Soil	MCAVLVVVANILREPAFQVAFVNCDDVIQEITPATPYPTLCDSILPRTFERSAGRIHPKGSNRCRDLQSLLGITIKDDEPRSGSKWKRFSQLLHDP*
Ga0164298_114990971	3300012955	Soil	MRKDVTDCYGASSSVWRSLPESEMRAVLVVVANILSEQAFQVAFVNCDDVIQEITPATPYPTLCDSILPRTFERSAERIHPQGSNRCGDLQSILGITIKDDEPRSGSKWKCFSQLLHDP*
Ga0164299_104841001	3300012958	Soil	MCAVLVVVANILREPAFQVAFVNCDDVIQEITPATPYPTLCDSILPRTFERSAERIHPQGSNRCGDLHSILGITIKDDEPRSGSKWKC
Ga0164301_107763452	3300012960	Soil	MRKDVTGCYGASSSVWRSLPESEMCAVLVVVANILREPAFQVAFVNCDDVIQEITPATPYPTLCDSILPRTFERSAERIHPQGSNRCGDLQSILGITIKDDEPRSGSKWKCFSQLLHDP*
Ga0164302_101141302	3300012961	Soil	MRKDVTGGYGASSSVWRSLPESEMCAVLVVVANILREPAFQGAFVNCDDVIQEITPATPYPTLCDSILPRTFERSAERIHPQGSNRCGDLQSILGITIKDDEPRSGSKWKCFSQLLHDP*
Ga0164309_101794503	3300012984	Soil	MRKDVTGGYGASSSVWRSLPESEMCAVLVVVANILREPAFQVAFVNCDDVIQEITPATPYPTLCDSILPRTFERSAERIHPQGSNRCGDLQSILGITIKDDEPRSGSKWKCFSQLLHDP*
Ga0164304_103719591	3300012986	Soil	GSPIVPVVQPSQSRMRKDVTGGYGASSSVWRSLPESEMCAVLVVVANILREPAFQVAFVNCDDVIQEITPATPYPTLCDSILPRTFERSAERIHPQGSNRCGDLQSILGITIKDDEPRSGSKWKCFSQLLHDP*
Ga0164305_103540021	3300012989	Soil	MRKDVTGGYGASSSVWRSLPESEMCAVLVVVANILREPAFQVAFVNCDDVIQEITPATPYPTLCDSILPRTFERSTERIHPQGSNRCGDLQSILGITIKDDEPRSGSKWKCFSQLLHDP*
Ga0163163_105316361	3300014325	Switchgrass Rhizosphere	SGYGASSSVWCSLPESEMCAVLVVVANILREPAFQVAFVNCNDVIQEITPATPYPTLCDSILPRTFERSAERIHPQGSNRYGDLQSILGITIKDHEPRSGSKWKCFSQLLHDP*
Ga0182015_105241431	3300014495	Palsa	MCAVLVVVANILREPASQVVFVNRDDVIQEITPATPYPTLCDSILPRAFERSADRMHPQGSNRSGNFQSILGITIKDDEPRN
Ga0182024_115897251	3300014501	Permafrost	TTLRWFGLGSSFVAVVQPSQSNMRKDVTCGYGASSSVWYSLPESEMCAVLVVVANILREATFQVAFVNCNDVIQEITPATPYPTLCDSILPRTFERGADRMHPQGSNRCRDFHSILGITIKDDEPRSGSKWKCFSQLLDDPQACRMLCDIEV*
Ga0182024_121657941	3300014501	Permafrost	MRKDVTGGYGTSSPVWRSLAESEMCAVLVVVANILREPAFQVAFVNCNDVIQEITPATPYPTLCDSILPRTLERGADRIHPQGSNGCGDFQSILGITIKDDEPRRGSKWKCFSQLLDDPQACRMLCDIEMQDMPTV
Ga0157376_104631052	3300014969	Miscanthus Rhizosphere	MRKDVTGGYGASSSIWRSLPESEMCAVLVVVANILKEPAFQVAFVNCDDVIQEITPATPYPTLCDSILPRTFERSAERIHPQGSNRCGDLQSILGITIKDDEPRSGPKWKCFSQLLHDP*
Ga0137411_10035861	3300015052	Vadose Zone Soil	MRAVLVVVANILREETFQVAFVNCNDVIQEITPATSYPTLCHSILPRTFERSADRTHPQGSNRCGHFQSILGITIKDDEPRCGSKWKCFSQLLDDPRACRMLCDIEVQDAPTIVTDDEKA
Ga0137420_12108711	3300015054	Vadose Zone Soil	MRAVLVVVANILREQAFQVAFVNCDDVIQEITAATPYPTLCDSILPRTFERSADRIHHQGSNRCRDFPSILGITIKDDEPRSGDDEPRSG
Ga0137420_14876774	3300015054	Vadose Zone Soil	VAILWYVANILGEQAFQVAFVNCNDVIQEITTATPTKTLCHFHSARTFERSADRLTLNRTAVGTSQSIPGITIKDEVNSRGASKWKNVLAHAISGLIVA*
Ga0137418_100282129	3300015241	Vadose Zone Soil	MRAILVVVANILGEQAFQVAFVNCDDVIQKITAATPYPTLCDSILPRTFERSADRIHHQGSNRCRDFPSILGITIKDDEPRSGFKWKCFSQLLDDPQACRMLGDIEVQD
Ga0134089_104521342	3300015358	Grasslands Soil	VAFVNCNDVIQEITPATPYPTLCNSILPRTFERSAERIHPQGSNRCGDLQSILGITIKDDEPRSGSKWKCFSQLLHDP*
Ga0134085_105732971	3300015359	Grasslands Soil	MRAILVVVANILGEQAFQVAFVNCDDVIKEITTATPYPTLCHPILPRTFERSADRTHAQGSNRRGDFQSILGITIKDHEPRSRSKWKCFSQLL
Ga0132255_1006557462	3300015374	Arabidopsis Rhizosphere	MCAVLVVVANILREAAFQVAFVNCDDVIQEITPATPYPTLCDSILPRTFERSADRIHPQGSNRCGDLQSILGITIKDDEPRSGSKWKCFSQLLHDP*
Ga0066669_120609102	3300018482	Grasslands Soil	MRAILVVVANILGEQAFQVAFVNCDDVIKEITTATPYPTLCHPILPRTFERSADRTHAQGSNRRGDFQSILGITIKDHE
Ga0137408_13557672	3300019789	Vadose Zone Soil	VAFVNCNDVIQEITPATPYPTLCDSILPRTFERSAERIHPQGSNRCGDLQSILGITIKDDEPRGGSKWKCFSQLLDDPRACRMLCDIEVQDTPTVVTDDEKA
Ga0193729_10040207	3300019887	Soil	MCAVLVVVVNILREPAFQVAFVNCDDVIQEITPATPYPTLCDSILPRTFERSAERIHPQGSSRCGDLQSILGITIKDDEPRSGSKWKCFSQLLHDP
Ga0193724_10250922	3300020062	Soil	MCAVLVVVVNILREPAFQVAFVNCDDVIQEITPATPYPTLCDSILPRTFERSWERVHPQGSNRCGDLQSILGITIKDDEPRSGSKWKCFSQLLDDP
Ga0179592_100237143	3300020199	Vadose Zone Soil	MRAVLVVVANILREPAFKVVFVNWNDVIQEITAATPYPTLCDSILPRTLERGADRTYAQGSNCCGDFQSILGIAIKDEEPWSGFKGKCFSQLLDDP
Ga0179592_102866842	3300020199	Vadose Zone Soil	MRAILVVVANILGEQAFQVAFVNCNDVIQEITTATPYPTLCHSILPRTFERSADRTHAQGSNRCRDFQSIPGITIKDEEPRSASKWKCFSQLLDDPRACRMLGDIEVQ
Ga0210403_1000117022	3300020580	Soil	LAFVNCNDVIQESTPVTPYPTLCDSILPRTLERGADRTHAQGSNCCEDFQSILGITIKDEEPWTGFKGKCFSQLLDDP
Ga0179596_100248312	3300021086	Vadose Zone Soil	VLRHNSKRTENVIQEITPATPYPTLCNSILPRTFERGADRTHAEGSNRCGHFQSILGITIKDDEPWSGFKGKCFSQLLDDPQACRMLCDIEVQD
Ga0210400_107951451	3300021170	Soil	MRAVLVVVANILREPAFQVAFVNCNDVIQEITAATPYPTLCDSILPRTRERGADRTHAQRLNCCRDFQSILGITIKDDEPWSGFKWKCFSQLLDDPQACRMLCD
Ga0210396_111986811	3300021180	Soil	MCAVLVVVVNILREPAFQVAFVNCDDVIQEITPATPYPTLCDSILPRTFERSAERIHPQGSNRCGDLQSILGITIKDEKPRSGSKWKCFSQLLDDPRACGMLCDIEVQDATTIVT
Ga0210402_106526801	3300021478	Soil	MHAVLVVVANILREQAFQVAFVDCDDVIQEITAATPYPALCHSILPRTFERSADRMHAQGSNRCGHFQSILGITIKDDEPRSGSKWKCFSQLLNDPHACRMLCDIEVQDAPTIVTDGEEA
Ga0242661_10478881	3300022717	Soil	MCPILVVVVNLLREPAFQVAFVNCDDVIQEITPATPYPTLCDSILPRTFERSAERIHPQGSNRCGDLQSILGITIKDDKPRSGSEWKCFSQLLDDPRACRMLYD
Ga0247691_10223342	3300024222	Soil	MRKDVTGGYGASSSVWRSLPESEMCAVLVVVAHILREPAFQVAFVNCDDVIQEITPATPYPTLCDSILPRTFERSAERIHPQGSNRCGDLQSILGITIKDDEPRSGSKWKCFSQLLHDP
Ga0247670_10472042	3300024283	Soil	MRKDVTGGYGASSSIWRSLPESEMCAVLVVVANILTEPSFQVAFVNCDDVIQEITPATPYPTLCDSILPRTFERSAERIHPQGSNRCGDLQSILGITIKDDEPRSGSKWKCFSQLLHDP
Ga0137417_10124882	3300024330	Vadose Zone Soil	VAFVNCDDVIQEITPATPYPTLCDSILPRTFERSAERIHPQGSNRCGDLQSILGITIKDDEPRSGSKWKCFSQL
Ga0137417_12250952	3300024330	Vadose Zone Soil	VAFVNCDDVIQEITAATPYPTLCDSILPRTFERSADRIHHQGSNRCGDFQSILGITIKDDEPWSGFKWKCFSQL
Ga0207692_110838451	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	QVAFVNCDDVIQEITPATPYPTLCDSILPRTFERSAERIHPQGSNRCGDLQSILGITIKDDEPRSGSKWKCFSQLLHDP
Ga0207684_101373141	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	ANILREPAFQVAFVNCDDVIQEITPATPYPTLCDSILPSTFERSADRIHPQGSNRCGDLQSILGITIKDDEPRSGSKWKCFSQLLHDP
Ga0207646_1000518215	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MCAVLVVVANILREPAFQVAFVNCDDVIQEITPATPYPTLCDSILPSTFERSADRIHPQGSNRCGDLQSILGITIKDDEPRSGSKWKCFSQLLHDP
Ga0207703_112525721	3300026035	Switchgrass Rhizosphere	MRRWFALGSPIVPVVQSSQSRMRKDVTGGYGASSSVWRSLPESEMCAVLVVVANILTEPSFQVAFVNCDDVIQEITPATPYPTLCDSILPRTFERSAERIHPQGSNRCGDLQSILGINIKDDEPRSGSKWKCFSQLLHDP
Ga0209131_11342621	3300026320	Grasslands Soil	MRAVSVVVANILREQAFQVAFVHCNDVIQEITPAAPYPTLCDSILPRTLERGANRTHAQRSNCCGDFQSILGIPIKDDEPRSGSKWKCFSQLL
Ga0257170_10236081	3300026351	Soil	MCAVLVVVANILREPAFQVAFVNCDDVIQEITPATPYPTLCDSILPRTFERSAERIHPQGSNRCGDLQSILGITIKDDEPRSGSKWKCFSQLLHDP
Ga0257180_10695722	3300026354	Soil	AFQVAFVNCDDVIQEITPATPYPTLCDSILPRTFERSAERIHPQGSNRCGDLQSILGITIKDDEPRSGSKWKCFSQLLHDP
Ga0209648_102703341	3300026551	Grasslands Soil	VLRHNSKRTENVIQEITPATPYPTLCNSILPRTFERGADRTHAEGSNRCGHFQSILGITIKDDEPWSGFKGKCFSQLLDDPQACRMLCDIEVQDAPTI
Ga0209648_105791262	3300026551	Grasslands Soil	MRAVLVVVANILREHAFQVAFVNCDDVIQEITAATPYPTLCDSILPRTLERGADRTHAQGSNRCRDFQSILGIMIKDDEPRSGSKWKCFSQLLDDPQACRMLGDIEVQD
Ga0179587_104447511	3300026557	Vadose Zone Soil	VISSVWRSLPQSEMRAVLVVVANILREPASQVAFVNCNDVIQEITAATPYPTLCDSILPRTFERSADRIYPQGSNRCGDFQSILGITIKDDEPRSRSKWKCFSQLLDDPQACRMLGDI
Ga0179587_105987031	3300026557	Vadose Zone Soil	MRAILVVVANILGEQAFQVAFVNCNDVIQEITTATPYPTLCHSILPRTFERSADRTHAQGSNRCRDFQSIPGITIKDEEPRSASKWKCFSQLLDDPRACRMLCDIEVQDAPTIVTDDEK
Ga0209220_11871401	3300027587	Forest Soil	MRAVLMVVANILREPPFQVAFVNCNDVIQEITPATPYPTLCDSILPRTFERSADRIHPQGSNRCGDFQSILGITIKDDEPRSGSKWKCFSQLLDDPQACRMLCDIEMQDTPTIVT
Ga0209422_11101562	3300027629	Forest Soil	MRAILVVVANILGEQAFQVAFVNCDDVIQEITAATPYPTLCDSILPRTFERSADSIHPQGSNRCRDFQSILGITIKDNEPRSGSKWKCFSQLLDDPQACRMLCDIEVQD
Ga0209076_11280701	3300027643	Vadose Zone Soil	MRAVLVVVANILREPAFQVAFVNCNDVIQEITPATPYPTLCNSILPRTLERGADRTHAEGSNRCGDFQSVLGITIKDDEPRSGSKWKCFSQLLDDPQACRMLCDIEVQDATTIVTD
Ga0209117_11131512	3300027645	Forest Soil	MCAVLVVVANILREPAFQVAFVNCDDVIQEITPATPYATLCDTILPRTFERSAERIQPQGSNRCGDLQSILGITIKDDEPR
Ga0208990_11936411	3300027663	Forest Soil	MRAVFVVVANILREEAFQVAFVNCDDVIQEIMAATPYPTLCDSILPRTLERGTDRIHPQGSNRCWDFQSILGITIKDDEPRSGSKWKCFSQLLDDPRACRMHCDIEVQDAPTIVTDDEK
Ga0209588_10043238	3300027671	Vadose Zone Soil	MRAVLVVVANILREQAFQVAFVSCNDVIQEITPATPYPTLCDSILPRTLERGADRTHAEGSNRCGDFQSILGITIEDDEPRSGSK
Ga0209588_12208092	3300027671	Vadose Zone Soil	MCAILVVVSNILRKQASQVAFVNCDDVIQEITPASPYPTLCDSILPRTSERGADRTHAQGPNRCGDFQSILGITIKDDEPRSGSKWKRFSQLLDDPRACRM
Ga0209180_102997381	3300027846	Vadose Zone Soil	MRAVLVVVANILREQAFQVAFVNCNDVIQEITLATPYPTLCDSILPRTLERGADRTHAEGSNRCGDFQSILGITIKDDEPRSA
Ga0209180_107470892	3300027846	Vadose Zone Soil	DATCGDGASSSVWRSLPESEMRAVLVVVANILREPASQVAFVNCNDVIQEITAATPYPTLCDSILPRTFERSADRIYPQGSNRCGDFQSILGITIKDDEPRSRSKWKCFSQLLDDPQACRMLGDIECRIRRRS
Ga0247682_10559342	3300028146	Soil	MRKDVTGGYGASSSVWRSLPESEMCAVLVVVANILREPSFQVAFVNCDDVIQEITPATPYPTLCDSILPRTFERSTERIHPQGSNRCGDLQSILGITIKDDEPRSGSKWKCF
Ga0170834_1042714761	3300031057	Forest Soil	VVVANILQEQAFQVAFVNCDDVIQEITPATPYPALCDSILPRTFERGADRTHAQGSNCCGDFQSILGITIKDEEPRSGFKGKCFSQLLDDP
Ga0170823_106730061	3300031128	Forest Soil	LREPAFQVAFVNCDDVIQEITPATPYPALCDSILPRTFERGADRTHAQGSNCCGDFQSILGITIKDEEPRSGFKGKCFSQLLDDP
Ga0170820_154842331	3300031446	Forest Soil	MRKDVTGGYGASSSVWRSLPESEMCAVLVVVANILREAAFQVAFVNCDDVIQEITPATPYPTLCDSILPRTFERSADRIHPQGSNRCGDLQSILGITIKDDEPRSGSKWKCFSQLLDDPRACRMLCDIEVQD
Ga0170819_153312251	3300031469	Forest Soil	VTLRRFGLGSPIVPVMQPSQSRMRKDVTGGYGASSSVWRSLPESEMCAVLVVVANILREPSFQVAFVNCDDVIQEITPATPYPTLCDSILPRTFECGLDSPKGSNRCRDFQSKLGITIKDDEPTIGVDPN
Ga0307476_104586511	3300031715	Hardwood Forest Soil	MEEPGRFHDAALVRIRQPDRTGGAALQSRMRKDVTGGYRASSSVWRSLPQSEMRAVLVVVANILREPAFQVAFVNCDDVIQEVTPTTPYPTLCDSILPRTFERSAERIHPQGSNRYGDLQSILGITIKDDEPRSGSKWKCFSQLLHDP
Ga0318529_103703951	3300031792	Soil	MCAVLVVVANILSEQPFQVAFVNCNDVIQEITTATPYPTLCDSILPRTFERGADRIHVQGSNRCGHFQSILAIPIKDDEPRSGSKWKCFSQLLDDPRACRMLCDIEVQDTPTVVTDDEK
Ga0307479_101845751	3300031962	Hardwood Forest Soil	VNCDDVIQEITPATPYPTLCDSILPRTFERSADWIHPKGSNRSKDLQSILGITIKDDEPRSASKWKCFSQLLHDP
Ga0310811_109296871	3300033475	Soil	MRKDVTGGYGASSSIWRSLPESEMCAVLVVVANILREPAFQVAFVNCDDVIQEITPATPYPTLCDSILPRTFERSAERIHPQGSNRCQDLQSILGITIKDD

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F052126

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences